Cp4.1LG01g11890 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g11890
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSquamosa promoter-binding protein
LocationCp4.1LG01 : 5787938 .. 5789740 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTTGAGACTCAGGGGCATTGGTAATATGGGCGATGGTTCTATGGATGACATGAAAGGAACTAGAGTTTCTTTGATCGAGTCATCGGCTTCGAGATTAATGAAGAGGTCACGTGCCCCTGGAAGCGGTCCCCAAGTCCCTTCCTGTATGGTTGATGGTTGTAGCTCAGACCTTAGCAAATGCAGGGACTATCATCGCCGCCATAAAGTATGTGAGCTCCATTCTAAAACACCAAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGTCAGCAGTGTAGCAGGTGAGTTTAAATGTTTAGAACATCAATATCTGCAATTTGGTTCATTAATTCTGCCTTGGGTTAATTTTCATGATTTTCTTGTCGGATTGAAATAATTTGAGTTAGGCATATAGGATATCTTAAACTTGTTGCTTTTCATCTTGTACTTGGAAACTTATCCATATTTTTCATGGATAGGATATACTTGGAAACATTCCCTCATGGATATATTTTAAAATGTGCTAATGTTTTTGCCTTTTACCAGATGGTTGAATCAGTGTTGGATGCAAATATTTGTGAGATACTTACATTTTGTGTTTCTTTTACTTCTTATCTTTGTATGGTTGGTTCCCTTCTTGGCATTCGTTTCAGTTCCCTTAACATGTGCTTGTAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAGCGTCTCGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACTATGACACTAAATGCAGGAAGATTTCTCTATGGCAACCAAGGTTTGTATTATTATTAGTTTAGGCTTGGTTTCCCTGGTCCGATCCAATTGAATTCTCTTCCATGCTTCCAAGAATTCCATGACTGTTCCCAATGTTTACATTGTTGTTTCGTTGTCGAATGATGAACCAGTGCGAAGTACATACGACTTGTTTGTGCAGGTCCAAGATTCTTACCATTTGGTAATCAATTACTGTCTGCCAGCAATGATGTGAGCTCTTCTTGGATTGGAATGATCAAACCCGAGAGCAATGCCCCTCTTTGCAGCGGCAACTCACAGTTTGACTTTGGTGACAGAAGAAAAAGTATGTTGCTGCCTGGATCATTGGCTTGTGATTACAAAGAAAAACAATTAGCAATCTCTTGCATCCCTATAGGATTGCTTCCCAAATCATCCGATGCTCACCCATTTCTCGACGTTGAATCCAGCAACGGAGAGAATGTTCAGAAAGTGTTCGGAAACGGATCAGATCAGTTCTTCAACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCCGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCACCCCAGCCCATTTCATCCACAGTGACGGTCTTGGCTTGGAGAGTGACCCTGTTAATTCTGGTATGGTCTCGGACGGTAGCAGCCATGGCAACATACGGTGCTACCCGACGTTCCAGGATGGTCTTGCTGGATCATCTGTAGATTTATTCAGGTATTGAAACATGAAAGTTGGGTCATTCTTGTAGGTTCTGAGATAGATTTATGTAATATGCCTATTCTCTTCAGGATTTAACTCAGCCACTGTTAACCTTCCAATCTCTGCTTGCTTCTTTTGTTCTGTGAGTTTTAAGGAATGCTGTTGTGTTGTGTGTGAAATGTCTGTTTCGATGTTTTTACTTTGTTCAGACTTGAGATTTGGAATATTAATTTTGTGCCTCTTTTCAGTTCCTCTTCTCTTGGAATAGTCAAAATAGTTGATTTTGGTTATGGATCATATGAT

mRNA sequence

ATGTATTTGAGACTCAGGGGCATTGGTAATATGGGCGATGGTTCTATGGATGACATGAAAGGAACTAGAGTTTCTTTGATCGAGTCATCGGCTTCGAGATTAATGAAGAGGTCACGTGCCCCTGGAAGCGGTCCCCAAGTCCCTTCCTGTATGGTTGATGGTTGTAGCTCAGACCTTAGCAAATGCAGGGACTATCATCGCCGCCATAAAGTATGTGAGCTCCATTCTAAAACACCAAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGTCAGCAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAGCGTCTCGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACTATGACACTAAATGCAGGAAGATTTCTCTATGGCAACCAAGGTCCAAGATTCTTACCATTTGGTAATCAATTACTGTCTGCCAGCAATGATGTGAGCTCTTCTTGGATTGGAATGATCAAACCCGAGAGCAATGCCCCTCTTTGCAGCGGCAACTCACAGTTTGACTTTGGTGACAGAAGAAAAAGTATGTTGCTGCCTGGATCATTGGCTTGTGATTACAAAGAAAAACAATTAGCAATCTCTTGCATCCCTATAGGATTGCTTCCCAAATCATCCGATGCTCACCCATTTCTCGACGTTGAATCCAGCAACGGAGAGAATGTTCAGAAAGTGTTCGGAAACGGATCAGATCAGTTCTTCAACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCCGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCACCCCAGCCCATTTCATCCACAGTGACGGTCTTGGCTTGGAGAGTGACCCTGTTAATTCTGGTATGGTCTCGGACGGTAGCAGCCATGGCAACATACGGTGCTACCCGACGTTCCAGGATGGTCTTGCTGGATCATCTGTAGATTTATTCAGGTATTGAAACATGAAAGTTGGGTCATTCTTGTAGGTTCTGAGATAGATTTATGTAATATGCCTATTCTCTTCAGGATTTAACTCAGCCACTGTTAACCTTCCAATCTCTGCTTGCTTCTTTTGTTCTGTGAGTTTTAAGGAATGCTGTTGTGTTGTGTGTGAAATGTCTGTTTCGATGTTTTTACTTTGTTCAGACTTGAGATTTGGAATATTAATTTTGTGCCTCTTTTCAGTTCCTCTTCTCTTGGAATAGTCAAAATAGTTGATTTTGGTTATGGATCATATGAT

Coding sequence (CDS)

ATGTATTTGAGACTCAGGGGCATTGGTAATATGGGCGATGGTTCTATGGATGACATGAAAGGAACTAGAGTTTCTTTGATCGAGTCATCGGCTTCGAGATTAATGAAGAGGTCACGTGCCCCTGGAAGCGGTCCCCAAGTCCCTTCCTGTATGGTTGATGGTTGTAGCTCAGACCTTAGCAAATGCAGGGACTATCATCGCCGCCATAAAGTATGTGAGCTCCATTCTAAAACACCAAAAGTAACCATTTGCGGTCAGGAACAACGATTCTGTCAGCAGTGTAGCAGATTCCATTCTTTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAGCGTCTCGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCAGCGACTATGACACTAAATGCAGGAAGATTTCTCTATGGCAACCAAGGTCCAAGATTCTTACCATTTGGTAATCAATTACTGTCTGCCAGCAATGATGTGAGCTCTTCTTGGATTGGAATGATCAAACCCGAGAGCAATGCCCCTCTTTGCAGCGGCAACTCACAGTTTGACTTTGGTGACAGAAGAAAAAGTATGTTGCTGCCTGGATCATTGGCTTGTGATTACAAAGAAAAACAATTAGCAATCTCTTGCATCCCTATAGGATTGCTTCCCAAATCATCCGATGCTCACCCATTTCTCGACGTTGAATCCAGCAACGGAGAGAATGTTCAGAAAGTGTTCGGAAACGGATCAGATCAGTTCTTCAACTCTGACTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGCCCGGGGAGATTAATCTAAGCTCCATGAGCCAATCCAACCTCATCACCCCAGCCCATTTCATCCACAGTGACGGTCTTGGCTTGGAGAGTGACCCTGTTAATTCTGGTATGGTCTCGGACGGTAGCAGCCATGGCAACATACGGTGCTACCCGACGTTCCAGGATGGTCTTGCTGGATCATCTGTAGATTTATTCAGGTATTGA

Protein sequence

MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVFGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMVSDGSSHGNIRCYPTFQDGLAGSSVDLFRY
Homology
[Close]
BLAST of Cp4.1LG01g11890 vs. Swiss-Prot
Match: SPL16_ORYSJ (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica GN=SPL16 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.9e-46
Identity = 127/302 (42.05%), Postives = 147/302 (48.68%), Query Frame = 1 

Query: 3   LRLRGIGNMGDGSM--------DDMKG-------TRVSLIESSASRLMKRSRAPGSGPQV 62
           L+L G+G  G G          +  KG       T  +   SSA     R  A     Q 
Sbjct: 56  LKLGGLGEFGGGGAQPRVAVAGEPAKGKGPAAAATGAAAAASSAPAKRPRGAAAAGQQQC 115

Query: 63  PSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRK 122
           PSC VDGC  DLSKCRDYHRRHKVCE HSKTP V + G+E RFCQQCSRFH L EFD+ K
Sbjct: 116 PSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSGREMRFCQQCSRFHLLQEFDEAK 175

Query: 123 RSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMI 182
           RSCRKRLDGHNRRRRKPQP  M  N+  +L   QG RF PF      A+    +SW GMI
Sbjct: 176 RSCRKRLDGHNRRRRKPQPDPM--NSASYLASQQGARFSPF------ATPRPEASWTGMI 235

Query: 183 KPESN-------APLCSGNSQFDF------GDRRKSMLLPGSL-------ACDYKEKQLA 242
           K E +        PL   + Q  F      G RR   L  G +       A      Q A
Sbjct: 236 KTEESPYYTHHQIPLGISSRQQHFVGSTSDGGRRFPFLQEGEISFGTGAGAGGVPMDQAA 295

Query: 243 ISCIPIGLLPKSSDAHPFLDVESSNGENVQKVFGNGS-DQFFNSDCALSLLSTPVEPGEI 269
            +       P      P        G    K+F +G   Q  +SDCALSLLS P     I
Sbjct: 296 AAAAASVCQPLLKTVAPPPPPHGGGGSGGGKMFSDGGLTQVLDSDCALSLLSAPANSTAI 349

[Close]
BLAST of Cp4.1LG01g11890 vs. Swiss-Prot
Match: TGA1W_MAIZE (Teosinte glume architecture 1 OS=Zea mays GN=TGA1 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 7.9e-44
Identity = 129/338 (38.17%), Postives = 165/338 (48.82%), Query Frame = 1 

Query: 14  GSMDDMKGTRVSLIESSASRLMKRSRAPGSG----PQVPSCMVDGCSSDLSKCRDYHRRH 73
           G M + +         +A+   KR R  G G     Q PSC VDGC +DL KCRDYHRRH
Sbjct: 64  GGMGECEPGAARREREAAAGAAKRPRPAGPGGQQQQQCPSCAVDGCRADLGKCRDYHRRH 123

Query: 74  KVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATM 133
           KVCE HSKTP V + G+E RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQP TM
Sbjct: 124 KVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDTM 183

Query: 134 TLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWI-GMIKPESNA-------PLCSGNSQ 193
              +  F+   QG RF PF +  L AS      W  G++K E +        PL S +S 
Sbjct: 184 A--SASFIASQQGTRFSPFAHPRLEAS------WPPGVMKTEESPYHITHQIPLGSSSSS 243

Query: 194 FDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLL----------PKSSDA-HPFLDV-- 253
                R++  +  G+    Y ++      +  G +          P ++ A  P L    
Sbjct: 244 -----RQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRTGA 303

Query: 254 -ESSNGENVQKVFGN-GSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSD 313
              S+G    K+F + G  +  +SDCALSLLS P      N S +  S ++ P   +   
Sbjct: 304 PSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPA-----NSSGIDVSRMVRPTEHV--- 363

Query: 314 GLGLESDPVNSGMVSDGSSHGNIRCYPTFQDGLAGSSV 325
                  P+    V  G   G+   +P  Q    GS V
Sbjct: 364 -------PMAQQPVVPGLQFGSASWFPRPQASTGGSFV 373

[Close]
BLAST of Cp4.1LG01g11890 vs. Swiss-Prot
Match: TGA1B_MAIZE (Teosinte glume architecture 1 OS=Zea mays GN=TGA1 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.0e-43
Identity = 129/339 (38.05%), Postives = 165/339 (48.67%), Query Frame = 1 

Query: 14  GSMDDMKGTRVSLIESSASRLMKRSRAPGSG-----PQVPSCMVDGCSSDLSKCRDYHRR 73
           G M + +         +A+   KR R  G G      Q PSC VDGC +DL KCRDYHRR
Sbjct: 64  GGMGECEPGAARREREAAAGAAKRPRPAGPGGQQQQQQCPSCAVDGCRADLGKCRDYHRR 123

Query: 74  HKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPAT 133
           HKVCE HSKTP V + G+E RFCQQCSRFH L EFD  KRSCRKRLDGHNRRRRKPQP T
Sbjct: 124 HKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADKRSCRKRLDGHNRRRRKPQPDT 183

Query: 134 MTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWI-GMIKPESNA-------PLCSGNS 193
           M   +  F+   QG RF PF +  L AS      W  G++K E +        PL S +S
Sbjct: 184 MA--SASFIASQQGTRFSPFAHPRLEAS------WPPGVMKTEESPYHITHQIPLGSSSS 243

Query: 194 QFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLL----------PKSSDA-HPFLDV- 253
                 R++  +  G+    Y ++      +  G +          P ++ A  P L   
Sbjct: 244 S-----RQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGVVLEPPAAAPACQPLLRTG 303

Query: 254 --ESSNGENVQKVFGN-GSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHS 313
               S+G    K+F + G  +  +SDCALSLLS P      N S +  S ++ P   +  
Sbjct: 304 APSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPA-----NSSGIDVSRMVRPTEHV-- 363

Query: 314 DGLGLESDPVNSGMVSDGSSHGNIRCYPTFQDGLAGSSV 325
                   P+    V  G   G+   +P  Q    GS V
Sbjct: 364 --------PMAQQPVVPGLQFGSASWFPRPQASTGGSFV 374

[Close]
BLAST of Cp4.1LG01g11890 vs. Swiss-Prot
Match: SP13B_ARATH (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana GN=SPL13B PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.0e-40
Identity = 129/321 (40.19%), Postives = 171/321 (53.27%), Query Frame = 1 

Query: 6   RGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP-QVPSCMVDGCS 65
           R IGN     GD     S+   K + ++  E S S   KR+R  G G  Q+P C+VDGC 
Sbjct: 48  RNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCD 107

Query: 66  SDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDG 125
           SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDG
Sbjct: 108 SDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDG 167

Query: 126 HNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSWIGMIKPESNAP 185
           HNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW   +   S A 
Sbjct: 168 HNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSL--VSVAV 227

Query: 186 LCSGNSQFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDA----HPFLDVES 245
             +G+S      + +S ++  S A      +  I   PI   P S+ +     PFL  E 
Sbjct: 228 AANGSSY----GQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIAKQFPFLQEEE 287

Query: 246 SNGENVQKVFGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSD---- 305
           S+      +    +    +SDCALSLLS+         SS S  +L+ P   +  +    
Sbjct: 288 SS--RTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVET 340

[Close]
BLAST of Cp4.1LG01g11890 vs. Swiss-Prot
Match: SP13A_ARATH (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana GN=SPL13A PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.0e-40
Identity = 129/321 (40.19%), Postives = 171/321 (53.27%), Query Frame = 1 

Query: 6   RGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP-QVPSCMVDGCS 65
           R IGN     GD     S+   K + ++  E S S   KR+R  G G  Q+P C+VDGC 
Sbjct: 48  RNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCD 107

Query: 66  SDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDG 125
           SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDG
Sbjct: 108 SDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDG 167

Query: 126 HNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSWIGMIKPESNAP 185
           HNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW   +   S A 
Sbjct: 168 HNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSL--VSVAV 227

Query: 186 LCSGNSQFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDA----HPFLDVES 245
             +G+S      + +S ++  S A      +  I   PI   P S+ +     PFL  E 
Sbjct: 228 AANGSSY----GQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIAKQFPFLQEEE 287

Query: 246 SNGENVQKVFGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSD---- 305
           S+      +    +    +SDCALSLLS+         SS S  +L+ P   +  +    
Sbjct: 288 SS--RTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVET 340

[Close]
BLAST of Cp4.1LG01g11890 vs. TrEMBL
Match: A0A0A0KAG4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G094760 PE=4 SV=1)

HSP 1 Score: 594.3 bits (1531), Expect = 8.7e-167
Identity = 292/329 (88.75%), Postives = 307/329 (93.31%), Query Frame = 1 

Query: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60
           MY  LRGIGNM + SMDDMKGTRV+LIESS+SRLMKRSRAPGSG QVPSCMVDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLL+AS+DVSSSWIGMIKPE+N PLC GNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLTASSDVSSSWIGMIKPENNVPLCGGNS 180

Query: 181 QFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVF 240
           QFDF DRRKSM LPGSL+ DYKEKQLAISCIPIGLLPKSSD  PFL+V SSNG NVQKV 
Sbjct: 181 QFDFTDRRKSM-LPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVL 240

Query: 241 GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMV 300
           GNGS++FF+SDCALSLLSTPVEPGEINLSSMSQSNLI PAHFIHSDGLGLE DP++SG+V
Sbjct: 241 GNGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLV 300

Query: 301 SDGSSHGNIRCYPTFQDGLAGSSVDLFRY 330
           SDGSS  NIRCY TFQDG  GSSVDLFR+
Sbjct: 301 SDGSSDANIRCYSTFQDGPDGSSVDLFRF 328

[Close]
BLAST of Cp4.1LG01g11890 vs. TrEMBL
Match: A0A061E606_THECC (Squamosa promoter-binding protein transcription factor family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_008671 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.5e-78
Identity = 169/313 (53.99%), Postives = 210/313 (67.09%), Query Frame = 1 

Query: 17  DDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHKVCELHS 76
           D  KG  V L+ESS+S   KR+RAPGSG QVPSC+VDGC++DLSKCRDYHRRHKVCE+HS
Sbjct: 10  DTFKGPGVPLMESSSSASFKRARAPGSGNQVPSCLVDGCTADLSKCRDYHRRHKVCEVHS 69

Query: 77  KTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRF 136
           KTPKVTI GQEQRFCQQCSRFHSLVEFD+ KRSCRKRLDGHNRRRRKPQP ++++N+GRF
Sbjct: 70  KTPKVTIRGQEQRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNRRRRKPQPDSLSVNSGRF 129

Query: 137 LYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKSMLLPGS 196
           L  +QG R+LPF N  + ++  V+SSW+G +K E++       S+ +F  R        S
Sbjct: 130 LSNHQGTRYLPFSNHQIFSATAVTSSWVGSVKVETDI-----KSELNFSSRNSLFRGSSS 189

Query: 197 LACDYKEKQLAISCIPIGLLPKSSDAHPFLDVE--SSNGENVQKVFGNGSDQFFNSDCAL 256
             C  +EK  +        LP  S   PFLD    S NG + +K+F NG +Q  NS+ AL
Sbjct: 190 QNCK-EEKHFSFLQSTSLSLPGVSVCQPFLDANPLSGNGGSSRKIFSNGLNQVINSNRAL 249

Query: 257 SLLST-PVEPGEINLS--SMSQSNLITPAH-FIHSDGLGLESDPVNSGMVSDGSSHGNIR 316
           SLLS+ P E GEI LS   M QS   +  +  +H +GLG+E + V S + SDGSS+ N  
Sbjct: 250 SLLSSQPAETGEIGLSPCPMVQSGPASSLNQNLHYNGLGMEGEQVGSILASDGSSNTNFH 309

Query: 317 CYPTFQDGLAGSS 324
               FQ G  GSS
Sbjct: 310 GNEMFQTGHPGSS 316

[Close]
BLAST of Cp4.1LG01g11890 vs. TrEMBL
Match: A5BHV4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03910 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 2.2e-77
Identity = 175/340 (51.47%), Postives = 217/340 (63.82%), Query Frame = 1 

Query: 3   LRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKC 62
           L+L  + ++GDGS++  K    S++ESS+S   KR+R PG G QV SC+VDGC SDLSKC
Sbjct: 47  LKLGRLSDLGDGSVNSFKS---SMMESSSSGSAKRARTPGHGTQVVSCLVDGCKSDLSKC 106

Query: 63  RDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRR 122
           RDYHRRHKVCELHSKT KVTI G EQRFCQQCSRFHSL EFD+ KRSCRKRLDGHNRRRR
Sbjct: 107 RDYHRRHKVCELHSKTAKVTIGGHEQRFCQQCSRFHSLGEFDEGKRSCRKRLDGHNRRRR 166

Query: 123 KPQPATMTLNAGRFLYGNQGPRFLPFGN-QLLSASNDVSSSWIGMIKPESNAPLCSGNSQ 182
           KPQP  +++ +GRFL  +QG R L F N Q+  AS  V+S+W G IK E++A L + + Q
Sbjct: 167 KPQPEPLSITSGRFLSSHQGTRLLAFSNPQVFPASAGVTSAWAGNIKTENDAVLYNSHQQ 226

Query: 183 FDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESS--NGENVQKV 242
            +F DR+ S   P S +  Y+ KQ      P   LP +S   P LD  S+  NG   QK+
Sbjct: 227 LNFMDRQNS--FPESFSRSYRGKQFPFLQGPNPTLPGTSVCQPLLDPSSASGNGSGGQKM 286

Query: 243 FGNGSDQFFNSDCALSLLST-PVEPGEINLSSMSQSNLITPA-------------HFIHS 302
           F +G ++  +SD ALSLLS+ P E  EI LS M Q N I PA              +  S
Sbjct: 287 FSDGLNRVISSDRALSLLSSPPPETQEIGLSRMVQQNPIPPAQSLIPSLHYTGLSQYASS 346

Query: 303 DGLGLESDPVNSGMVSDGSSHGNIRCYPTFQDGLAGSSVD 326
            G+G     V S +VSDGSS+ N+ C   FQ G  GSS +
Sbjct: 347 QGMG---GSVGSVLVSDGSSNANLHCPAIFQLGPDGSSTN 378

[Close]
BLAST of Cp4.1LG01g11890 vs. TrEMBL
Match: B9RMC2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079430 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 8.1e-72
Identity = 164/349 (46.99%), Postives = 208/349 (59.60%), Query Frame = 1 

Query: 3   LRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKC 62
           L+L   G++ D  ++   G   SL+ESS+S   KR R P +G  +PSC+VDGC+SDLSKC
Sbjct: 45  LKLGNSGDLEDKLVEKFSGPGDSLMESSSSGSSKRVRTPANGTHIPSCLVDGCASDLSKC 104

Query: 63  RDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRR 122
           RDYHRRHKVCELHSKTPKV I G EQRFCQQCSRFHSLVEFD+ KRSCRKRLDGHNRRRR
Sbjct: 105 RDYHRRHKVCELHSKTPKVFIKGLEQRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNRRRR 164

Query: 123 KPQPATMTLNAGRFLYGNQ--------------------GPRFLPFGNQLLSASNDVSSS 182
           KPQP +M +N+ R    +Q                    G R+L FG   + ++   SS 
Sbjct: 165 KPQPDSMPVNSARLFSNHQELEAKKIRFQALLKCLCHIAGTRYLQFGGSQIFSTTGASSG 224

Query: 183 WIGMIKPESNAPLCSGNSQFDFGDRRKSMLLPGSLACDYK-EKQLAISCIPIGLLPKSSD 242
           W G +KPE++  L +  S  +F   +   L PGS++  Y+  KQ   S      LP  S 
Sbjct: 225 WAGAVKPENDPMLYTNQSSLNFSSGKN--LFPGSMSHSYRGGKQFPFSHCTSSTLPGESV 284

Query: 243 AHPFLDVESSNGENV--QKVFGNGSDQFFNSDCALSLLSTP-VEPGEINLSSMSQSNLIT 302
               LDV S+ G +   QK+F +G +Q  +S+ ALSLLS+P  E  EI LS M Q +L  
Sbjct: 285 CQTILDVRSTLGSSSGNQKMFSDGVNQVIDSNGALSLLSSPQAETREIGLSHMVQPDLNP 344

Query: 303 PAH----FIHSDGLGLESDPVNSGMVSDGSSHGNIRCYPTFQDGLAGSS 324
           PA      ++   LG+E  PV S +VSDGS +GN+     FQ G   SS
Sbjct: 345 PAQSLIPSLNFSNLGMEGGPVESVLVSDGSHNGNLHSQDMFQTGPDESS 391

[Close]
BLAST of Cp4.1LG01g11890 vs. TrEMBL
Match: B9GZN1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16780g PE=4 SV=2)

HSP 1 Score: 258.5 bits (659), Expect = 1.1e-65
Identity = 149/306 (48.69%), Postives = 205/306 (66.99%), Query Frame = 1 

Query: 27  IESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQ 86
           +ES++S  +KR+R   +  +VPSC+VDGC+SDL+KCRDYHRRHKVCELHSK+ +V I GQ
Sbjct: 1   MESASSGSLKRARTLKNATRVPSCLVDGCTSDLTKCRDYHRRHKVCELHSKSRQVFIKGQ 60

Query: 87  EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFL 146
           EQRFCQQCSRFHSL EFD+ KRSCRKRLDGHNRRRRK QP ++++N+GR ++ NQG R+L
Sbjct: 61  EQRFCQQCSRFHSLGEFDEGKRSCRKRLDGHNRRRRKSQPESLSVNSGR-IFSNQGTRYL 120

Query: 147 PFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKSMLLPGSLACDYKE-KQ 206
            FG+  + +++ +++ W G  K ES+  L +  S  +FG R+   L PGSL+ +YKE KQ
Sbjct: 121 HFGSSQIFSTSVMNAVWTGAAKAESDPMLNTSQSSMNFGGRKN--LFPGSLSSNYKEGKQ 180

Query: 207 LAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVFGNGSDQFFNSDCALSLLST-PVEPG 266
            +        +P  S  H   +    N  N QK+F +G ++  +S+ ALSLLS+ P E  
Sbjct: 181 FSFLQGTSSTIPGDS-VHLDANSTLGNSGNSQKMFSDGLNRVIDSNRALSLLSSPPSETR 240

Query: 267 EINLSSMSQSNLITPAH----FIHSDGLGLESDPVNSGMVSDGSS-HGNIRCYPTFQDGL 326
           EI LS M Q +L +PA      ++ + LG+ES+P  S +VSDGSS + N+     FQ   
Sbjct: 241 EIGLSDMMQPDLNSPAQSLIPSLNYNALGMESEPAGSVLVSDGSSGNANLNGQHMFQIEP 300

[Close]
BLAST of Cp4.1LG01g11890 vs. TAIR10
Match: AT5G50570.1 (AT5G50570.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein)

HSP 1 Score: 166.8 bits (421), Expect = 2.3e-41
Identity = 129/321 (40.19%), Postives = 171/321 (53.27%), Query Frame = 1 

Query: 6   RGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP-QVPSCMVDGCS 65
           R IGN     GD     S+   K + ++  E S S   KR+R  G G  Q+P C+VDGC 
Sbjct: 48  RNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCD 107

Query: 66  SDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDG 125
           SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDG
Sbjct: 108 SDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDG 167

Query: 126 HNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSWIGMIKPESNAP 185
           HNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW   +   S A 
Sbjct: 168 HNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSL--VSVAV 227

Query: 186 LCSGNSQFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDA----HPFLDVES 245
             +G+S      + +S ++  S A      +  I   PI   P S+ +     PFL  E 
Sbjct: 228 AANGSSY----GQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIAKQFPFLQEEE 287

Query: 246 SNGENVQKVFGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSD---- 305
           S+      +    +    +SDCALSLLS+         SS S  +L+ P   +  +    
Sbjct: 288 SS--RTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVET 340

[Close]
BLAST of Cp4.1LG01g11890 vs. TAIR10
Match: AT5G50670.1 (AT5G50670.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein)

HSP 1 Score: 166.8 bits (421), Expect = 2.3e-41
Identity = 129/321 (40.19%), Postives = 171/321 (53.27%), Query Frame = 1 

Query: 6   RGIGN----MGDG----SMDDMKGTRVSLIESSASRLMKRSRAPGSGP-QVPSCMVDGCS 65
           R IGN     GD     S+   K + ++  E S S   KR+R  G G  Q+P C+VDGC 
Sbjct: 48  RNIGNSSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCD 107

Query: 66  SDLSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDG 125
           SD S CR+YH+RHKVC++HSKTP VTI G +QRFCQQCSRFH+L EFD+ KRSCRKRLDG
Sbjct: 108 SDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDG 167

Query: 126 HNRRRRKPQPATMTLNAGRFLYGNQGPRFLPF--GNQLLSASNDVSSSWIGMIKPESNAP 185
           HNRRRRKPQP  +   A  F  G QG + L F  G+ +   ++ ++ SW   +   S A 
Sbjct: 168 HNRRRRKPQPEHIGRPA-NFFTGFQGSKLLEFSGGSHVFPTTSVLNPSWGNSL--VSVAV 227

Query: 186 LCSGNSQFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDA----HPFLDVES 245
             +G+S      + +S ++  S A      +  I   PI   P S+ +     PFL  E 
Sbjct: 228 AANGSSY----GQSQSYVVGSSPA------KTGI-MFPISSSPNSTRSIAKQFPFLQEEE 287

Query: 246 SNGENVQKVFGNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSD---- 305
           S+      +    +    +SDCALSLLS+         SS S  +L+ P   +  +    
Sbjct: 288 SS--RTASLCERMTSCIHDSDCALSLLSS---------SSSSVPHLLQPPLSLSQEAVET 340

[Close]
BLAST of Cp4.1LG01g11890 vs. TAIR10
Match: AT2G42200.1 (AT2G42200.1 squamosa promoter binding protein-like 9)

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-33
Identity = 71/130 (54.62%), Postives = 88/130 (67.69%), Query Frame = 1 

Query: 29  SSASRLMKRSRAPGSGP--QVPSCMVDGCSSDLSKCRDYHRRHKVCELHSKTPKVTICGQ 88
           SS  R  +R R  GSG   Q+P C V+GC  DL+  + Y+ RH+VC +HSKTPKVT+ G 
Sbjct: 51  SSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGI 110

Query: 89  EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRFLYGNQGPRFL 148
           EQRFCQQCSRFH L EFD  KRSCR+RL GHN RRRKPQPA++++ A R  YG   P   
Sbjct: 111 EQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLASR--YGRIAPSLY 170

Query: 149 PFGNQLLSAS 157
             G+  ++ S
Sbjct: 171 ENGDAGMNGS 178

[Close]
BLAST of Cp4.1LG01g11890 vs. TAIR10
Match: AT1G27370.1 (AT1G27370.1 squamosa promoter binding protein-like 10)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-31
Identity = 68/142 (47.89%), Postives = 90/142 (63.38%), Query Frame = 1 

Query: 17  DDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHKVCELHS 76
           +D+    ++L+  S     K++++ G   QVP C +DGC  DLS  +DYHR+H+VCE HS
Sbjct: 144 NDLSAVSMNLLTPSVVA-RKKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHS 203

Query: 77  KTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRF 136
           K PKV + G E+RFCQQCSRFH++ EFD++KRSCRKRL  HN RRRKPQ     LN+ R 
Sbjct: 204 KCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRSCRKRLSHHNARRRKPQ-GVFPLNSERV 263

Query: 137 LYGNQGPRFLPFGNQLLSASND 159
               Q    L  G  L + S +
Sbjct: 264 FDRRQHTSMLWNGLSLNTRSEE 283

[Close]
BLAST of Cp4.1LG01g11890 vs. TAIR10
Match: AT1G76580.1 (AT1G76580.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein)

HSP 1 Score: 133.3 bits (334), Expect = 2.8e-31
Identity = 69/118 (58.47%), Postives = 79/118 (66.95%), Query Frame = 1 

Query: 17  DDMKGTRVSLIESSASRLMKRSRAPGSGP----QVPSCMVDGCSSDLSKCRDYHRRHKVC 76
           +D++GT V L   S      RS +PGSG       P C VD C  DLS  +DYHRRHKVC
Sbjct: 48  NDVEGTPVDLTRPSKK---VRSGSPGSGGGGGGNYPKCQVDNCKEDLSIAKDYHRRHKVC 107

Query: 77  ELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMT 131
           E+HSK  K  +  Q QRFCQQCSRFH L EFD+ KRSCR+RLDGHNRRRRK QP  +T
Sbjct: 108 EVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRSCRRRLDGHNRRRRKTQPDAIT 162

[Close]
BLAST of Cp4.1LG01g11890 vs. NCBI nr
Match: gi|449445550|ref|XP_004140535.1| (PREDICTED: squamosa promoter-binding-like protein 16 [Cucumis sativus])

HSP 1 Score: 594.3 bits (1531), Expect = 1.3e-166
Identity = 292/329 (88.75%), Postives = 307/329 (93.31%), Query Frame = 1 

Query: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60
           MY  LRGIGNM + SMDDMKGTRV+LIESS+SRLMKRSRAPGSG QVPSCMVDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLL+AS+DVSSSWIGMIKPE+N PLC GNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLTASSDVSSSWIGMIKPENNVPLCGGNS 180

Query: 181 QFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVF 240
           QFDF DRRKSM LPGSL+ DYKEKQLAISCIPIGLLPKSSD  PFL+V SSNG NVQKV 
Sbjct: 181 QFDFTDRRKSM-LPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVL 240

Query: 241 GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMV 300
           GNGS++FF+SDCALSLLSTPVEPGEINLSSMSQSNLI PAHFIHSDGLGLE DP++SG+V
Sbjct: 241 GNGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLV 300

Query: 301 SDGSSHGNIRCYPTFQDGLAGSSVDLFRY 330
           SDGSS  NIRCY TFQDG  GSSVDLFR+
Sbjct: 301 SDGSSDANIRCYSTFQDGPDGSSVDLFRF 328

[Close]
BLAST of Cp4.1LG01g11890 vs. NCBI nr
Match: gi|659119804|ref|XP_008459851.1| (PREDICTED: squamosa promoter-binding-like protein 16 [Cucumis melo])

HSP 1 Score: 592.8 bits (1527), Expect = 3.7e-166
Identity = 292/329 (88.75%), Postives = 306/329 (93.01%), Query Frame = 1 

Query: 1   MYLRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLS 60
           MY  LRGIGNM + SMDDMKGTRV+LIESS+SRLMKRSRAPGSG QVPSCMVDGCSSDLS
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLS 60

Query: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRR 120
           KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSL EFDDRKRSCRKRLDGHNRR
Sbjct: 61  KCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLAEFDDRKRSCRKRLDGHNRR 120

Query: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNS 180
           RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSAS+DVSSSWIGMIKPE+NAPLC GNS
Sbjct: 121 RRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASSDVSSSWIGMIKPENNAPLCGGNS 180

Query: 181 QFDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESSNGENVQKVF 240
           QFDF DRRKSM LPGSL+ DYKEKQLAISCIPIGLLPKSSD  PFL+V SSNG NVQKV 
Sbjct: 181 QFDFTDRRKSM-LPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVL 240

Query: 241 GNGSDQFFNSDCALSLLSTPVEPGEINLSSMSQSNLITPAHFIHSDGLGLESDPVNSGMV 300
           GNGS++FF+SDCALSLLSTPVEPGEINLSSMSQSNLI PAHFIHSDGLGLE DP++SG+V
Sbjct: 241 GNGSNRFFDSDCALSLLSTPVEPGEINLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLV 300

Query: 301 SDGSSHGNIRCYPTFQDGLAGSSVDLFRY 330
           SDGSS  NIRCY TFQDG  GSS DLFR+
Sbjct: 301 SDGSSDANIRCYSTFQDGPDGSSGDLFRF 328

[Close]
BLAST of Cp4.1LG01g11890 vs. NCBI nr
Match: gi|590692007|ref|XP_007043940.1| (Squamosa promoter-binding protein transcription factor family protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 301.2 bits (770), Expect = 2.2e-78
Identity = 169/313 (53.99%), Postives = 210/313 (67.09%), Query Frame = 1 

Query: 17  DDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKCRDYHRRHKVCELHS 76
           D  KG  V L+ESS+S   KR+RAPGSG QVPSC+VDGC++DLSKCRDYHRRHKVCE+HS
Sbjct: 10  DTFKGPGVPLMESSSSASFKRARAPGSGNQVPSCLVDGCTADLSKCRDYHRRHKVCEVHS 69

Query: 77  KTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATMTLNAGRF 136
           KTPKVTI GQEQRFCQQCSRFHSLVEFD+ KRSCRKRLDGHNRRRRKPQP ++++N+GRF
Sbjct: 70  KTPKVTIRGQEQRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNRRRRKPQPDSLSVNSGRF 129

Query: 137 LYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQFDFGDRRKSMLLPGS 196
           L  +QG R+LPF N  + ++  V+SSW+G +K E++       S+ +F  R        S
Sbjct: 130 LSNHQGTRYLPFSNHQIFSATAVTSSWVGSVKVETDI-----KSELNFSSRNSLFRGSSS 189

Query: 197 LACDYKEKQLAISCIPIGLLPKSSDAHPFLDVE--SSNGENVQKVFGNGSDQFFNSDCAL 256
             C  +EK  +        LP  S   PFLD    S NG + +K+F NG +Q  NS+ AL
Sbjct: 190 QNCK-EEKHFSFLQSTSLSLPGVSVCQPFLDANPLSGNGGSSRKIFSNGLNQVINSNRAL 249

Query: 257 SLLST-PVEPGEINLS--SMSQSNLITPAH-FIHSDGLGLESDPVNSGMVSDGSSHGNIR 316
           SLLS+ P E GEI LS   M QS   +  +  +H +GLG+E + V S + SDGSS+ N  
Sbjct: 250 SLLSSQPAETGEIGLSPCPMVQSGPASSLNQNLHYNGLGMEGEQVGSILASDGSSNTNFH 309

Query: 317 CYPTFQDGLAGSS 324
               FQ G  GSS
Sbjct: 310 GNEMFQTGHPGSS 316

[Close]
BLAST of Cp4.1LG01g11890 vs. NCBI nr
Match: gi|225425368|ref|XP_002270226.1| (PREDICTED: squamosa promoter-binding-like protein 16 [Vitis vinifera])

HSP 1 Score: 297.4 bits (760), Expect = 3.2e-77
Identity = 175/340 (51.47%), Postives = 217/340 (63.82%), Query Frame = 1 

Query: 3   LRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKC 62
           L+L  + ++GDGS++  K    S++ESS+S   KR+R PG G QV SC+VDGC SDLSKC
Sbjct: 47  LKLGRLSDLGDGSVNSFKS---SMMESSSSGSAKRARTPGHGTQVVSCLVDGCKSDLSKC 106

Query: 63  RDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRR 122
           RDYHRRHKVCELHSKT KVTI G EQRFCQQCSRFHSL EFD+ KRSCRKRLDGHNRRRR
Sbjct: 107 RDYHRRHKVCELHSKTAKVTIGGHEQRFCQQCSRFHSLGEFDEGKRSCRKRLDGHNRRRR 166

Query: 123 KPQPATMTLNAGRFLYGNQGPRFLPFGN-QLLSASNDVSSSWIGMIKPESNAPLCSGNSQ 182
           KPQP  +++ +GRFL  +QG R L F N Q+  AS  V+S+W G IK E++A L + + Q
Sbjct: 167 KPQPEPLSITSGRFLSSHQGTRLLAFSNPQVFPASAGVTSAWAGNIKTENDAVLYNSHQQ 226

Query: 183 FDFGDRRKSMLLPGSLACDYKEKQLAISCIPIGLLPKSSDAHPFLDVESS--NGENVQKV 242
            +F DR+ S   P S +  Y+ KQ      P   LP +S   P LD  S+  NG   QK+
Sbjct: 227 LNFMDRQNS--FPESFSRSYRGKQFPFLQGPNPTLPGTSVCQPLLDPSSASGNGSGGQKM 286

Query: 243 FGNGSDQFFNSDCALSLLST-PVEPGEINLSSMSQSNLITPA-------------HFIHS 302
           F +G ++  +SD ALSLLS+ P E  EI LS M Q N I PA              +  S
Sbjct: 287 FSDGLNRVISSDRALSLLSSPPPETQEIGLSRMVQQNPIPPAQSLIPSLHYTGLSQYASS 346

Query: 303 DGLGLESDPVNSGMVSDGSSHGNIRCYPTFQDGLAGSSVD 326
            G+G     V S +VSDGSS+ N+ C   FQ G  GSS +
Sbjct: 347 QGMG---GSVGSVLVSDGSSNANLHCPAIFQLGPDGSSTN 378

[Close]
BLAST of Cp4.1LG01g11890 vs. NCBI nr
Match: gi|1000975383|ref|XP_015572162.1| (PREDICTED: squamosa promoter-binding-like protein 16 [Ricinus communis])

HSP 1 Score: 290.8 bits (743), Expect = 3.0e-75
Identity = 164/329 (49.85%), Postives = 208/329 (63.22%), Query Frame = 1 

Query: 3   LRLRGIGNMGDGSMDDMKGTRVSLIESSASRLMKRSRAPGSGPQVPSCMVDGCSSDLSKC 62
           L+L   G++ D  ++   G   SL+ESS+S   KR R P +G  +PSC+VDGC+SDLSKC
Sbjct: 45  LKLGNSGDLEDKLVEKFSGPGDSLMESSSSGSSKRVRTPANGTHIPSCLVDGCASDLSKC 104

Query: 63  RDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRR 122
           RDYHRRHKVCELHSKTPKV I G EQRFCQQCSRFHSLVEFD+ KRSCRKRLDGHNRRRR
Sbjct: 105 RDYHRRHKVCELHSKTPKVFIKGLEQRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNRRRR 164

Query: 123 KPQPATMTLNAGRFLYGNQGPRFLPFGNQLLSASNDVSSSWIGMIKPESNAPLCSGNSQF 182
           KPQP +M +N+ R    +QG R+L FG   + ++   SS W G +KPE++  L +  S  
Sbjct: 165 KPQPDSMPVNSARLFSNHQGTRYLQFGGSQIFSTTGASSGWAGAVKPENDPMLYTNQSSL 224

Query: 183 DFGDRRKSMLLPGSLACDYK-EKQLAISCIPIGLLPKSSDAHPFLDVESSNGENV--QKV 242
           +F   +   L PGS++  Y+  KQ   S      LP  S     LDV S+ G +   QK+
Sbjct: 225 NFSSGKN--LFPGSMSHSYRGGKQFPFSHCTSSTLPGESVCQTILDVRSTLGSSSGNQKM 284

Query: 243 FGNGSDQFFNSDCALSLLSTP-VEPGEINLSSMSQSNLITPAH----FIHSDGLGLESDP 302
           F +G +Q  +S+ ALSLLS+P  E  EI LS M Q +L  PA      ++   LG+E  P
Sbjct: 285 FSDGVNQVIDSNGALSLLSSPQAETREIGLSHMVQPDLNPPAQSLIPSLNFSNLGMEGGP 344

Query: 303 VNSGMVSDGSSHGNIRCYPTFQDGLAGSS 324
           V S +VSDGS +GN+     FQ G   SS
Sbjct: 345 VESVLVSDGSHNGNLHSQDMFQTGPDESS 371

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g11890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SPL16_ORYSJ2.9e-4642.05Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica GN=SPL... [more]
TGA1W_MAIZE7.9e-4438.17Teosinte glume architecture 1 OS=Zea mays GN=TGA1 PE=1 SV=1[more]
TGA1B_MAIZE1.0e-4338.05Teosinte glume architecture 1 OS=Zea mays GN=TGA1 PE=3 SV=1[more]
SP13B_ARATH4.0e-4040.19Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana GN=SPL13B PE=... [more]
SP13A_ARATH4.0e-4040.19Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana GN=SPL13A PE=... [more]
BLAST of Cp4.1LG01g11890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAG4_CUCSA8.7e-16788.75Uncharacterized protein OS=Cucumis sativus GN=Csa_6G094760 PE=4 SV=1[more]
A0A061E606_THECC1.5e-7853.99Squamosa promoter-binding protein transcription factor family protein, putative ... [more]
A5BHV4_VITVI2.2e-7751.47Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03910 PE=4 SV=... [more]
B9RMC2_RICCO8.1e-7246.99Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079430 PE=4 SV=1[more]
B9GZN1_POPTR1.1e-6548.69Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s16780g PE=4 SV=2[more]
BLAST of Cp4.1LG01g11890 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G50570.12.3e-4140.19 Squamosa promoter-binding protein-like (SBP domain) transcription fa... [more]
AT5G50670.12.3e-4140.19 Squamosa promoter-binding protein-like (SBP domain) transcription fa... [more]
AT2G42200.11.7e-3354.62 squamosa promoter binding protein-like 9[more]
AT1G27370.11.6e-3147.89 squamosa promoter binding protein-like 10[more]
AT1G76580.12.8e-3158.47 Squamosa promoter-binding protein-like (SBP domain) transcription fa... [more]
BLAST of Cp4.1LG01g11890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445550|ref|XP_004140535.1|1.3e-16688.75PREDICTED: squamosa promoter-binding-like protein 16 [Cucumis sativus][more]
gi|659119804|ref|XP_008459851.1|3.7e-16688.75PREDICTED: squamosa promoter-binding-like protein 16 [Cucumis melo][more]
gi|590692007|ref|XP_007043940.1|2.2e-7853.99Squamosa promoter-binding protein transcription factor family protein, putative ... [more]
gi|225425368|ref|XP_002270226.1|3.2e-7751.47PREDICTED: squamosa promoter-binding-like protein 16 [Vitis vinifera][more]
gi|1000975383|ref|XP_015572162.1|3.0e-7549.85PREDICTED: squamosa promoter-binding-like protein 16 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR004333SBP_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g11890.1Cp4.1LG01g11890.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004333Transcription factor, SBP-boxGENE3DG3DSA:4.10.1100.10coord: 43..111
score: 1.1
IPR004333Transcription factor, SBP-boxPFAMPF03110SBPcoord: 50..123
score: 6.8
IPR004333Transcription factor, SBP-boxPROFILEPS51141ZF_SBPcoord: 47..124
score: 31
IPR004333Transcription factor, SBP-boxunknownSSF103612SBT domaincoord: 48..129
score: 3.27
NoneNo IPR availablePANTHERPTHR31251FAMILY NOT NAMEDcoord: 3..305
score: 9.5E
NoneNo IPR availablePANTHERPTHR31251:SF19SUBFAMILY NOT NAMEDcoord: 3..305
score: 9.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g11890Cucsa.349620Cucumber (Gy14) v1cgycpeB0913
Cp4.1LG01g11890CmaCh17G014370Cucurbita maxima (Rimu)cmacpeB398
Cp4.1LG01g11890CmaCh08G001700Cucurbita maxima (Rimu)cmacpeB920
Cp4.1LG01g11890CmoCh08G001730Cucurbita moschata (Rifu)cmocpeB856
Cp4.1LG01g11890CmoCh17G013760Cucurbita moschata (Rifu)cmocpeB360
Cp4.1LG01g11890Cla001519Watermelon (97103) v1cpewmB471
Cp4.1LG01g11890Csa6G094760Cucumber (Chinese Long) v2cpecuB464
Cp4.1LG01g11890MELO3C022318Melon (DHL92) v3.5.1cpemeB389
Cp4.1LG01g11890ClCG06G002110Watermelon (Charleston Gray)cpewcgB402
Cp4.1LG01g11890CSPI06G07800Wild cucumber (PI 183967)cpecpiB465
Cp4.1LG01g11890Lsi09G017300Bottle gourd (USVL1VR-Ls)cpelsiB312
Cp4.1LG01g11890MELO3C022318.2Melon (DHL92) v3.6.1cpemedB449
Cp4.1LG01g11890CsaV3_6G008180Cucumber (Chinese Long) v3cpecucB0573
Cp4.1LG01g11890Bhi12G002174Wax gourdcpewgoB0495
Cp4.1LG01g11890CsGy6G007860Cucumber (Gy14) v2cgybcpeB802
Cp4.1LG01g11890Carg04999Silver-seed gourdcarcpeB0127
Cp4.1LG01g11890Carg11596Silver-seed gourdcarcpeB0024
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g11890Cp4.1LG17g10620Cucurbita pepo (Zucchini)cpecpeB331
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g11890Watermelon (Charleston Gray)cpewcgB409
Cp4.1LG01g11890Watermelon (97103) v1cpewmB417
Cp4.1LG01g11890Melon (DHL92) v3.5.1cpemeB365
Cp4.1LG01g11890Cucumber (Gy14) v2cgybcpeB646
Cp4.1LG01g11890Melon (DHL92) v3.6.1cpemedB441
Cp4.1LG01g11890Silver-seed gourdcarcpeB0938
Cp4.1LG01g11890Silver-seed gourdcarcpeB1259
Cp4.1LG01g11890Cucumber (Chinese Long) v3cpecucB0541
Cp4.1LG01g11890Wax gourdcpewgoB0553
Cp4.1LG01g11890Cucurbita pepo (Zucchini)cpecpeB374
Cp4.1LG01g11890Cucumber (Gy14) v1cgycpeB0387
Cp4.1LG01g11890Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g11890Cucurbita maxima (Rimu)cmacpeB722
Cp4.1LG01g11890Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g11890Cucurbita moschata (Rifu)cmocpeB674
Cp4.1LG01g11890Wild cucumber (PI 183967)cpecpiB437
Cp4.1LG01g11890Cucumber (Chinese Long) v2cpecuB437
Cp4.1LG01g11890Bottle gourd (USVL1VR-Ls)cpelsiB354