Carg04999 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04999
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	squamosa promoter-binding-like protein 16
Location	Cucurbita_argyrosperma_scaffold_060 : 719835 .. 722557 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTTTTCTCTCTTTACTCAACAGATTTTCCCCTTCTCTCCCACCAAAATCCCATGGATTTGGGTCTCTAAACAATACAATTCTCAACACTTCCAAAATACCCATTTCCAACTACATTATCCACTCTTCCCAATTTCTCATTCTAATTTCTTCCTTCTTTTGCTTTCTCTAACTCTTCATCCGCCCAAATCCCAAATCCGATTCCCTTTTGGTTTTTGAACCCGTTTCTCATCCTTCTGTTTCTTCAGTTCTTCCTCTTTCAGCTTCCTCAGGTTGAAGTTGGAGCTTCACTCGTGAGTTTCTTCTAATTTATTGCTGTTTTTTGTTTGTTTTTGTATGAATGCAATTTGTAGGGATTGAAATTAGTTTGTCATGATTTGATGATGCTGCAGAATTGGGTTTCTGTTGGAATTTTCTGTTGTTCTGGATTTTAATCTTGGTGATGATGAGCTACTTTCGTTATACTTTTTACAAAATTTGAGCATAGATCTTAGAGAATTGTGACTGAAGTGGATAGTTCATGTTGATGGGCCATATTCCTCGTCTTTTGCAGCCTAAAATTTGATCTAGTTGAGGAAATTTTGACAGTACTGATTGTATTACTTGTTTGTGTTGTATTTGCTTAAGCTTGAGTTGTATCCTTCCTATTGCTGCTCAATCGTTCATCGTTCATCGTTCATCGTTCATCGTTCATCGTCTGGTTTCTTACTCTTATTGAGGGAAATTTGTATTGGGAATCGGTGTTGTTTAGAGAAAAGGAAAACGTTCAAAAAATTGTAAAGTATAGAAGGAAACTGAGAGTGTGTTGGAGTAGAGGAAGTTGGTTGATGTATTTGAGACTCAGGGGCATTGGTCATATGGGTGAAGGATCAATGGATGACATCGAAGGAACTAGAGTTACTTTGATCGAGTCGTTGTCGTCGTCGTCTTCGAGATTAACGAAGAGGTCACGTACCCCTTATAACGGACCCCAAGTTCCTTCGTGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAGTGCAGGGACTATCATCGTCGCCATAAAGTGTGCGAGTTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCGGGAACAACGATTCTGCCAGCAATGTAGCAGGTGTGTTGGAATGTTTAGAACATCATATGCTGTAATTTTCTTCATTGATTCAGCCTTCTTATGGTTTTCTTTTCTGATCATTAGAATTCAAGTTATGCAGATGGGGTATACTTTTAGGCTGTTCGTTTTTTTCTGTGTTAGCGGTGGGTTTGGGCTGTTACAAAGGTATCAGAACCAGTCACCGGGCGATGTACCAATGAGGACGTTGGGTCCCCAAGGGGATGGATCGTGAACTCCCACATCGGTTGGAGAGGAGAACGAAGCATTCCTTATAAGGGTGTAGAAACCTTTCCCTAGTAGACGTGTTTTAAAACTGTGAGACTGACGGCAATACGAAATAGGCCAAAGCGGACAACATCTGCTAGCGGTGGGATTGAGCTATTACAAATGGTATCAAAGCTAGACACTGAGGGGTGTGCTAGCGAGGACGTTGGGCTCCCAATGGGGGTAGATTGTGAGATCTCACATTGGTTGGAGAGGGGAACGAAATATTCCTTATGAGTGTGAAAACCTTTTCCTAGTAGACGCGCTTTAAAATCGTGAGGCTGAGGGTGATACGTAACGGGCTAAAGTAGACACTATCTACTAGCGGTGGGCTTGGGTTGTTACAGTGGGTGGGATAAGCTCTCTTCTTTTACTCTATTTCACTACCTCGAGTTTGTGCTTGCATTTGTTTTCTGCTGTAACATGTTCAAGGCGTGCTCGTATCTTTACTCCTCGGACCCCGGACGCGGATGGCGGATTCCCATAATCTATTTGCTTTTTACCAGATAGTTGAATAAGTATTGGAAGCAAAGCTTTGTGGGACTTGCATTTTATATGTTTCTTTTACTTCTTACCTTTGTCTGGTTGGTTCTGTTCTTGGTATTCATTTCAGTTCAATTACACATGTTCTTGTAGATTCCATTCTCTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCTGCAACGATAACGCTTAATGCAGGACGATTTCTCTATAGCAACCAAGGTTCGTTATATTAATTTAGGCATTCTCTTCCACGCTTGCATGTTTCGTCATCGAATGACTTGCTTGTACAGGTCCAAGATTCTTACCATTTGGTAACCAGTTACTGTCTACTGGCAATGATTTGAGCTCATCTTGGATCGGAATGATCAAGCCCGAGCATAACGACGCTCTTTGCAGCAGCAACTCACAGCTCGACATTGCTGACAGAAGAAAAAGTATGTTTCCCGGGCTGTCGGGCTGTGATTACAAAGAAAAACAGCCGCCATTTCTCAATGTTGGATCCAACAACGTTGGGAATGTTCAGAAAGTGGTGGGAAATGGCTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGGCTGGGGAGATTAATAATCTAACCTCCATGGTCCAATCCAACCTCATCCCCTCATCCCATTTTGTCCATAGCGACGGTCTTGGCTTCGAGAGTGACCTCGTTAGTCCTCGTTTGGTCTCGGACGGTAGCAGCGATGCCAACATCCGGTGCTACTCGATGTTCGAGGACGGACCTGATGGATCATCCATAGATTTATTCAGGTTTTGA

mRNA sequence

TTTGTTTTCTCTCTTTACTCAACAGATTTTCCCCTTCTCTCCCACCAAAATCCCATGGATTTGGGTCTCTAAACAATACAATTCTCAACACTTCCAAAATACCCATTTCCAACTACATTATCCACTCTTCCCAATTTCTCATTCTAATTTCTTCCTTCTTTTGCTTTCTCTAACTCTTCATCCGCCCAAATCCCAAATCCGATTCCCTTTTGGTTTTTGAACCCGTTTCTCATCCTTCTGTTTCTTCAGTTCTTCCTCTTTCAGCTTCCTCAGGTTGAAGTTGGAGCTTCACTCGGGCATTGGTCATATGGGTGAAGGATCAATGGATGACATCGAAGGAACTAGAGTTACTTTGATCGAGTCGTTGTCGTCGTCGTCTTCGAGATTAACGAAGAGGTCACGTACCCCTTATAACGGACCCCAAGTTCCTTCGTGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAGTGCAGGGACTATCATCGTCGCCATAAAGTGTGCGAGTTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCGGGAACAACGATTCTGCCAGCAATGTAGCAGATTCCATTCTCTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCTGCAACGATAACGCTTAATGCAGGACGATTTCTCTATAGCAACCAAGGTCCAAGATTCTTACCATTTGGTAACCAGTTACTGTCTACTGGCAATGATTTGAGCTCATCTTGGATCGGAATGATCAAGCCCGAGCATAACGACGCTCTTTGCAGCAGCAACTCACAGCTCGACATTGCTGACAGAAGAAAAAGTATGTTTCCCGGGCTGTCGGGCTGTGATTACAAAGAAAAACAGCCGCCATTTCTCAATGTTGGATCCAACAACGTTGGGAATGTTCAGAAAGTGGTGGGAAATGGCTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGGCTGGGGAGATTAATAATCTAACCTCCATGGTCCAATCCAACCTCATCCCCTCATCCCATTTTGTCCATAGCGACGGTCTTGGCTTCGAGAGTGACCTCGTTAGTCCTCGTTTGGTCTCGGACGGTAGCAGCGATGCCAACATCCGGTGCTACTCGATGTTCGAGGACGGACCTGATGGATCATCCATAGATTTATTCAGGTTTTGA

Coding sequence (CDS)

ATGGGTGAAGGATCAATGGATGACATCGAAGGAACTAGAGTTACTTTGATCGAGTCGTTGTCGTCGTCGTCTTCGAGATTAACGAAGAGGTCACGTACCCCTTATAACGGACCCCAAGTTCCTTCGTGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAGTGCAGGGACTATCATCGTCGCCATAAAGTGTGCGAGTTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCGGGAACAACGATTCTGCCAGCAATGTAGCAGATTCCATTCTCTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCTGCAACGATAACGCTTAATGCAGGACGATTTCTCTATAGCAACCAAGGTCCAAGATTCTTACCATTTGGTAACCAGTTACTGTCTACTGGCAATGATTTGAGCTCATCTTGGATCGGAATGATCAAGCCCGAGCATAACGACGCTCTTTGCAGCAGCAACTCACAGCTCGACATTGCTGACAGAAGAAAAAGTATGTTTCCCGGGCTGTCGGGCTGTGATTACAAAGAAAAACAGCCGCCATTTCTCAATGTTGGATCCAACAACGTTGGGAATGTTCAGAAAGTGGTGGGAAATGGCTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGGCTGGGGAGATTAATAATCTAACCTCCATGGTCCAATCCAACCTCATCCCCTCATCCCATTTTGTCCATAGCGACGGTCTTGGCTTCGAGAGTGACCTCGTTAGTCCTCGTTTGGTCTCGGACGGTAGCAGCGATGCCAACATCCGGTGCTACTCGATGTTCGAGGACGGACCTGATGGATCATCCATAGATTTATTCAGGTTTTGA

Protein sequence

MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF

Homology

[Close]

BLAST of Carg04999 vs. NCBI nr
Match: XP_022959623.1 (squamosa promoter-binding-like protein 16 isoform X2 [Cucurbita moschata])

HSP 1 Score: 608.6 bits (1568), Expect = 1.1e-170
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60
           MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR
Sbjct: 1   MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60

Query: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120
           RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA
Sbjct: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120

Query: 121 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 180
           TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR
Sbjct: 121 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 180

Query: 181 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 240
           RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV
Sbjct: 181 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 240

Query: 241 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 298
           QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF
Sbjct: 241 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 297

[Close]

BLAST of Carg04999 vs. NCBI nr
Match: XP_022959621.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata] >XP_022959622.1 squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata])

HSP 1 Score: 608.6 bits (1568), Expect = 1.1e-170
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 1   MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60
           MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR
Sbjct: 11  MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 70

Query: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120
           RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA
Sbjct: 71  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 130

Query: 121 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 180
           TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR
Sbjct: 131 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 190

Query: 181 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 240
           RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV
Sbjct: 191 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 250

Query: 241 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 298
           QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF
Sbjct: 251 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 307

[Close]

BLAST of Carg04999 vs. NCBI nr
Match: XP_023513759.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513760.1 squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513761.1 squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 584.7 bits (1506), Expect = 1.7e-163
Identity = 285/297 (95.96%), Postives = 290/297 (97.64%), Query Frame = 0


Query: 1   MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60
           MGEGSMDD+EGTRVTLIES SSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR
Sbjct: 11  MGEGSMDDMEGTRVTLIES-SSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 70

Query: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120
           RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA
Sbjct: 71  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 130

Query: 121 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 180
           TI LNAGRFLYSNQGPRFLPFGNQLLS  NDLSSSW+G IKPEHNDALCSSNSQLD ADR
Sbjct: 131 TIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSSNSQLDDADR 190

Query: 181 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 240
           RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKV+GNGCALSLLSTPVEAGEINNLTSMV
Sbjct: 191 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAGEINNLTSMV 250

Query: 241 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 298
           QSNLIPSSHF+H+DGLGFESDLVSPRL SDGSSDANIRCYSMFEDGPDGSSIDLFRF
Sbjct: 251 QSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSSIDLFRF 306

[Close]

BLAST of Carg04999 vs. NCBI nr
Match: XP_023513762.1 (squamosa promoter-binding-like protein 16 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 584.7 bits (1506), Expect = 1.7e-163
Identity = 285/297 (95.96%), Postives = 290/297 (97.64%), Query Frame = 0


Query: 1   MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60
           MGEGSMDD+EGTRVTLIES SSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR
Sbjct: 1   MGEGSMDDMEGTRVTLIES-SSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60

Query: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120
           RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA
Sbjct: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120

Query: 121 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 180
           TI LNAGRFLYSNQGPRFLPFGNQLLS  NDLSSSW+G IKPEHNDALCSSNSQLD ADR
Sbjct: 121 TIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSSNSQLDDADR 180

Query: 181 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 240
           RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKV+GNGCALSLLSTPVEAGEINNLTSMV
Sbjct: 181 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAGEINNLTSMV 240

Query: 241 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 298
           QSNLIPSSHF+H+DGLGFESDLVSPRL SDGSSDANIRCYSMFEDGPDGSSIDLFRF
Sbjct: 241 QSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSSIDLFRF 296

[Close]

BLAST of Carg04999 vs. NCBI nr
Match: XP_023004220.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita maxima])

HSP 1 Score: 579.7 bits (1493), Expect = 5.6e-162
Identity = 285/297 (95.96%), Postives = 289/297 (97.31%), Query Frame = 0


Query: 1   MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60
           MGEGSMDD EGTRVTLIESL SSS RLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR
Sbjct: 11  MGEGSMDDNEGTRVTLIESL-SSSLRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 70

Query: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120
           RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA
Sbjct: 71  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 130

Query: 121 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 180
           T+TLNAGRFLYSNQGPRFLPFGNQLLS  NDLSSSWIG IKPEHNDALCSSNSQLD+ADR
Sbjct: 131 TMTLNAGRFLYSNQGPRFLPFGNQLLSACNDLSSSWIGTIKPEHNDALCSSNSQLDVADR 190

Query: 181 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 240
           RKSMFPGLSGCDYKEKQPPFLNVGS+NVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV
Sbjct: 191 RKSMFPGLSGCDYKEKQPPFLNVGSSNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 250

Query: 241 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 298
           QSNLIPSSHF H+DGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLF F
Sbjct: 251 QSNLIPSSHFSHTDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFWF 306

[Close]

BLAST of Carg04999 vs. TAIR10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein)

HSP 1 Score: 157.9 bits (398), Expect = 9.6e-39
Identity = 102/226 (45.13%), Postives = 131/226 (57.96%), Query Frame = 0


Query: 18  ESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTIC 77
           E   SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI 
Sbjct: 78  EGSRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTIN 137

Query: 78  GREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPR 137
           G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG +
Sbjct: 138 GHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSK 197

Query: 138 FLPF--GNQLLSTGNDLSSSW----IGMIKPEHNDALCSSNSQLDIADRRKS--MFPGLS 197
            L F  G+ +  T + L+ SW    + +    +  +   S S +  +   K+  MFP  S
Sbjct: 198 LLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISS 257

Query: 198 GCDYKE---KQPPFL--NVGSNNVGNVQKVVG----NGCALSLLST 227
             +      KQ PFL     S      +++      + CALSLLS+
Sbjct: 258 SPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of Carg04999 vs. TAIR10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein)

HSP 1 Score: 157.9 bits (398), Expect = 9.6e-39
Identity = 102/226 (45.13%), Postives = 131/226 (57.96%), Query Frame = 0


Query: 18  ESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTIC 77
           E   SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI 
Sbjct: 78  EGSRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTIN 137

Query: 78  GREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPR 137
           G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG +
Sbjct: 138 GHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSK 197

Query: 138 FLPF--GNQLLSTGNDLSSSW----IGMIKPEHNDALCSSNSQLDIADRRKS--MFPGLS 197
            L F  G+ +  T + L+ SW    + +    +  +   S S +  +   K+  MFP  S
Sbjct: 198 LLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISS 257

Query: 198 GCDYKE---KQPPFL--NVGSNNVGNVQKVVG----NGCALSLLST 227
             +      KQ PFL     S      +++      + CALSLLS+
Sbjct: 258 SPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of Carg04999 vs. TAIR10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9)

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31
Identity = 79/197 (40.10%), Postives = 109/197 (55.33%), Query Frame = 0


Query: 39  QVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDD 98
           Q+P C V+GC  DL+  + Y+ RH+VC  HSKTPKVT+ G EQRFCQQCSRFH L EFD 
Sbjct: 70  QIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFDL 129

Query: 99  RKRSCRKRLDGHNRRRRKPQPATITLNAGRF------LYSN--QGPRFLPFGNQLLSTGN 158
            KRSCR+RL GHN RRRKPQPA++++ A R+      LY N   G      GNQ +   +
Sbjct: 130 EKRSCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLYENGDAGMNGSFLGNQEIGWPS 189

Query: 159 DLSSSWIGMIKPEHNDALCSSNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGN 218
             +     M +P     + S + Q++  +       G  G  +   +     +    + +
Sbjct: 190 SRTLDTRVMRRP-----VSSPSWQINPMNVFSQGSVGGGGTSFSSPE-----IMDTKLES 249

Query: 219 VQKVVGNGCALSLLSTP 228
            + +  + CALSLLS P
Sbjct: 250 YKGIGDSNCALSLLSNP 256

[Close]

BLAST of Carg04999 vs. TAIR10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10)

HSP 1 Score: 131.0 bits (328), Expect = 1.3e-30
Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 0


Query: 29  KRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCS 88
           K++++     QVP C +DGC  DLS  +DYHR+H+VCE HSK PKV + G E+RFCQQCS
Sbjct: 162 KKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCS 221

Query: 89  RFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLST 148
           RFH++ EFD++KRSCRKRL  HN RRRKPQ     LN+ R     Q    L +    L+T
Sbjct: 222 RFHAVSEFDEKKRSCRKRLSHHNARRRKPQ-GVFPLNSERVFDRRQHTSML-WNGLSLNT 281

Query: 149 GNDLSSSW 157
            ++   +W
Sbjct: 282 RSEEKYTW 287

[Close]

BLAST of Carg04999 vs. TAIR10
Match: AT5G43270.2 (squamosa promoter binding protein-like 2)

HSP 1 Score: 128.6 bits (322), Expect = 6.2e-30
Identity = 59/101 (58.42%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 19  SLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICG 78
           +L+SSS    K+S++     Q P C V+GC+ DLS  +DYHR+H++CE HSK PKV + G
Sbjct: 145 TLASSSVSPVKKSKSIPQRLQTPHCQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSG 204

Query: 79  REQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQP 120
            E+RFCQQCSRFH L EFD++KRSCR+RL  HN RRRKP P
Sbjct: 205 VERRFCQQCSRFHCLSEFDEKKRSCRRRLSDHNARRRKPNP 245

[Close]

BLAST of Carg04999 vs. Swiss-Prot
Match: sp|Q6YZE8|SPL16_ORYSJ (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.8e-42
Identity = 92/171 (53.80%), Postives = 105/171 (61.40%), Query Frame = 0


Query: 39  QVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDD 98
           Q PSC VDGC  DLSKCRDYHRRHKVCE HSKTP V + GRE RFCQQCSRFH L EFD+
Sbjct: 114 QCPSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSGREMRFCQQCSRFHLLQEFDE 173

Query: 99  RKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIG 158
            KRSCRKRLDGHNRRRRKPQP    +N+  +L S QG RF PF            +SW G
Sbjct: 174 AKRSCRKRLDGHNRRRRKPQPD--PMNSASYLASQQGARFSPFATP------RPEASWTG 233

Query: 159 MIKPEHNDALCSSNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVG 210
           MIK E +         L I+ R++      S      ++ PFL  G  + G
Sbjct: 234 MIKTEESPYYTHHQIPLGISSRQQHFVGSTSD---GGRRFPFLQEGEISFG 273

[Close]

BLAST of Carg04999 vs. Swiss-Prot
Match: sp|Q49I57|TGA1B_MAIZE (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.5e-38
Identity = 111/276 (40.22%), Postives = 136/276 (49.28%), Query Frame = 0


Query: 41  PSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRK 100
           PSC VDGC +DL KCRDYHRRHKVCE HSKTP V + GRE RFCQQCSRFH L EFD  K
Sbjct: 103 PSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADK 162

Query: 101 RSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSW-IGM 160
           RSCRKRLDGHNRRRRKPQP T+   +  F+ S QG RF PF +        L +SW  G+
Sbjct: 163 RSCRKRLDGHNRRRRKPQPDTMA--SASFIASQQGTRFSPFAHP------RLEASWPPGV 222

Query: 161 IKPE-------HNDALCSSNSQLDIADRRKSMFPGLSGCD----YKEKQPPFLNVG---- 220
           +K E       H   L SS+S       R+  F  L         + ++ PFL  G    
Sbjct: 223 MKTEESPYHITHQIPLGSSSSS------RQQHFVALGAATPAYAKEGRRFPFLQEGEISF 282

Query: 221 --------------------------SNNVG--------NVQKVVGNGCALSLLSTPVEA 267
                                     S+  G         + +V+ + CALSLLS P  +
Sbjct: 283 ATGVVLEPPAAAPACQPLLRTGAPSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPANS 342

[Close]

BLAST of Carg04999 vs. Swiss-Prot
Match: sp|Q49I55|TGA1W_MAIZE (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.5e-38
Identity = 111/276 (40.22%), Postives = 136/276 (49.28%), Query Frame = 0


Query: 41  PSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRK 100
           PSC VDGC +DL KCRDYHRRHKVCE HSKTP V + GRE RFCQQCSRFH L EFD  K
Sbjct: 102 PSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDADK 161

Query: 101 RSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSW-IGM 160
           RSCRKRLDGHNRRRRKPQP T+   +  F+ S QG RF PF +        L +SW  G+
Sbjct: 162 RSCRKRLDGHNRRRRKPQPDTMA--SASFIASQQGTRFSPFAHP------RLEASWPPGV 221

Query: 161 IKPE-------HNDALCSSNSQLDIADRRKSMFPGLSGCD----YKEKQPPFLNVG---- 220
           +K E       H   L SS+S       R+  F  L         + ++ PFL  G    
Sbjct: 222 MKTEESPYHITHQIPLGSSSSS------RQQHFVALGAATPAYAKEGRRFPFLQEGEISF 281

Query: 221 --------------------------SNNVG--------NVQKVVGNGCALSLLSTPVEA 267
                                     S+  G         + +V+ + CALSLLS P  +
Sbjct: 282 ATGVVLEPPAAAPACQPLLRTGAPSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPANS 341

[Close]

BLAST of Carg04999 vs. Swiss-Prot
Match: sp|B9DI20|SP13A_ARATH (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-37
Identity = 102/226 (45.13%), Postives = 131/226 (57.96%), Query Frame = 0


Query: 18  ESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTIC 77
           E   SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI 
Sbjct: 78  EGSRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTIN 137

Query: 78  GREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPR 137
           G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG +
Sbjct: 138 GHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSK 197

Query: 138 FLPF--GNQLLSTGNDLSSSW----IGMIKPEHNDALCSSNSQLDIADRRKS--MFPGLS 197
            L F  G+ +  T + L+ SW    + +    +  +   S S +  +   K+  MFP  S
Sbjct: 198 LLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISS 257

Query: 198 GCDYKE---KQPPFL--NVGSNNVGNVQKVVG----NGCALSLLST 227
             +      KQ PFL     S      +++      + CALSLLS+
Sbjct: 258 SPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of Carg04999 vs. Swiss-Prot
Match: sp|P0DI11|SP13B_ARATH (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.7e-37
Identity = 102/226 (45.13%), Postives = 131/226 (57.96%), Query Frame = 0


Query: 18  ESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTIC 77
           E   SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI 
Sbjct: 78  EGSRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTIN 137

Query: 78  GREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPR 137
           G +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG +
Sbjct: 138 GHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSK 197

Query: 138 FLPF--GNQLLSTGNDLSSSW----IGMIKPEHNDALCSSNSQLDIADRRKS--MFPGLS 197
            L F  G+ +  T + L+ SW    + +    +  +   S S +  +   K+  MFP  S
Sbjct: 198 LLEFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISS 257

Query: 198 GCDYKE---KQPPFL--NVGSNNVGNVQKVVG----NGCALSLLST 227
             +      KQ PFL     S      +++      + CALSLLS+
Sbjct: 258 SPNSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of Carg04999 vs. TrEMBL
Match: tr|A0A0A0KAG4|A0A0A0KAG4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094760 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.1e-129
Identity = 242/322 (75.16%), Postives = 259/322 (80.43%), Query Frame = 0


Query: 1   MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60
           M E SMDD++GTRV LIE   SSSSRL KRSR P +G QVPSCMVDGCSSDLSKCRDYHR
Sbjct: 11  MDERSMDDMKGTRVALIE---SSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLSKCRDYHR 70

Query: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120
           RHKVCE HSKTPKVTICG+EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA
Sbjct: 71  RHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 130

Query: 121 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 180
           T+TLNAGRFLY NQGPRFLPFGNQLL+  +D+SSSWIGMIKPE+N  LC  NSQ D  DR
Sbjct: 131 TMTLNAGRFLYGNQGPRFLPFGNQLLTASSDVSSSWIGMIKPENNVPLCGGNSQFDFTDR 190

Query: 181 RKSMFPGLSGCDYKEKQ-----------------PPFLNVGSNNVGNVQKVVGNG----- 240
           RKSM PG    DYKEKQ                  PFLNVGS+N GNVQKV+GNG     
Sbjct: 191 RKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLGNGSNRFF 250

Query: 241 ---CALSLLSTPVEAGEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDA 298
              CALSLLSTPVE GEI NL+SM QSNLIP +HF+HSDGLG E D +S  LVSDGSSDA
Sbjct: 251 DSDCALSLLSTPVEPGEI-NLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVSDGSSDA 310

[Close]

BLAST of Carg04999 vs. TrEMBL
Match: tr|A0A1S3CB53|A0A1S3CB53_CUCME (squamosa promoter-binding-like protein 16 OS=Cucumis melo OX=3656 GN=LOC103498851 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 7.1e-129
Identity = 242/322 (75.16%), Postives = 257/322 (79.81%), Query Frame = 0


Query: 1   MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60
           M E SMDD++GTRV LIE   SSSSRL KRSR P +G QVPSCMVDGCSSDLSKCRDYHR
Sbjct: 11  MDERSMDDMKGTRVALIE---SSSSRLMKRSRAPGSGAQVPSCMVDGCSSDLSKCRDYHR 70

Query: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120
           RHKVCE HSKTPKVTICG+EQRFCQQCSRFHSL EFDDRKRSCRKRLDGHNRRRRKPQPA
Sbjct: 71  RHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLAEFDDRKRSCRKRLDGHNRRRRKPQPA 130

Query: 121 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 180
           T+TLNAGRFLY NQGPRFLPFGNQLLS  +D+SSSWIGMIKPE+N  LC  NSQ D  DR
Sbjct: 131 TMTLNAGRFLYGNQGPRFLPFGNQLLSASSDVSSSWIGMIKPENNAPLCGGNSQFDFTDR 190

Query: 181 RKSMFPGLSGCDYKEKQ-----------------PPFLNVGSNNVGNVQKVVGNG----- 240
           RKSM PG    DYKEKQ                  PFLNVGS+N GNVQKV+GNG     
Sbjct: 191 RKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKVLGNGSNRFF 250

Query: 241 ---CALSLLSTPVEAGEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDA 298
              CALSLLSTPVE GEI NL+SM QSNLIP +HF+HSDGLG E D +S  LVSDGSSDA
Sbjct: 251 DSDCALSLLSTPVEPGEI-NLSSMSQSNLIPPAHFIHSDGLGLEGDPISSGLVSDGSSDA 310

[Close]

BLAST of Carg04999 vs. TrEMBL
Match: tr|A0A061E606|A0A061E606_THECC (Squamosa promoter-binding protein transcription factor family protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_008671 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.6e-67
Identity = 158/316 (50.00%), Postives = 201/316 (63.61%), Query Frame = 0


Query: 7   DDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCE 66
           D  +G  V L+ES SS+S    KR+R P +G QVPSC+VDGC++DLSKCRDYHRRHKVCE
Sbjct: 10  DTFKGPGVPLMESSSSAS---FKRARAPGSGNQVPSCLVDGCTADLSKCRDYHRRHKVCE 69

Query: 67  FHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNA 126
            HSKTPKVTI G+EQRFCQQCSRFHSLVEFD+ KRSCRKRLDGHNRRRRKPQP ++++N+
Sbjct: 70  VHSKTPKVTIRGQEQRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNRRRRKPQPDSLSVNS 129

Query: 127 GRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADRRKSMFP 186
           GRFL ++QG R+LPF N  + +   ++SSW+G +K E         S+L+ +  R S+F 
Sbjct: 130 GRFLSNHQGTRYLPFSNHQIFSATAVTSSWVGSVKVE-----TDIKSELNFSS-RNSLFR 189

Query: 187 GLSGCDYKEKQ------------------PPFLNVG--SNNVGNVQKVVGNGC------- 246
           G S  + KE++                   PFL+    S N G+ +K+  NG        
Sbjct: 190 GSSSQNCKEEKHFSFLQSTSLSLPGVSVCQPFLDANPLSGNGGSSRKIFSNGLNQVINSN 249

Query: 247 -ALSLLST-PVEAGEIN-NLTSMVQSNLIPS-SHFVHSDGLGFESDLVSPRLVSDGSSDA 292
            ALSLLS+ P E GEI  +   MVQS    S +  +H +GLG E + V   L SDGSS+ 
Sbjct: 250 RALSLLSSQPAETGEIGLSPCPMVQSGPASSLNQNLHYNGLGMEGEQVGSILASDGSSNT 309

[Close]

BLAST of Carg04999 vs. TrEMBL
Match: tr|A0A2C9UPR6|A0A2C9UPR6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G009400 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.9e-67
Identity = 155/306 (50.65%), Postives = 193/306 (63.07%), Query Frame = 0


Query: 20  LSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGR 79
           + SSSS  +KR RTP NG QVPSC+VDGC+SDLSKCRDYHRRHKVCE HSKTPKV I G+
Sbjct: 68  MESSSSGSSKRVRTPSNGNQVPSCLVDGCTSDLSKCRDYHRRHKVCELHSKTPKVFIKGQ 127

Query: 80  EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFL 139
           EQRFCQQCSRFHSLVEFD+ KRSCRKRLDGHNRRRRKPQP ++++ + R   ++QG R+L
Sbjct: 128 EQRFCQQCSRFHSLVEFDEGKRSCRKRLDGHNRRRRKPQPDSLSVTSSRLFSNHQGTRYL 187

Query: 140 PFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADRRKSMFPGLSGCDYKE-KQP 199
            FG   + + +  SS+W G IKPE++  L +S S L+    RK+ FPG     Y+  KQ 
Sbjct: 188 QFGGSQMFSTSPESSAWNGAIKPENDPMLYTSQSSLNFGS-RKNFFPGSLSHGYRSGKQF 247

Query: 200 PFLNVGSN---------NVGNVQKVVGNGC------------------ALSLLSTPVEAG 259
           PFL   S+          + +    +G+ C                  ALSLLS+P    
Sbjct: 248 PFLQCTSSALPGESICQTILHAGSTLGSSCSSQKMLSDGPNRVIDSNRALSLLSSPSAEN 307

Query: 260 EINNLTSMVQ--SNLIPSSHFVHS----DGLGFESDLVSPRLVSDGSSDANIRCYSMFED 292
               L+ MVQ  S+L P +H + S      LG E+  V   LVSDGSS+AN+   SMF+ 
Sbjct: 308 CEIRLSHMVQPESDLNPPAHSLISSLNFSCLGMENGSVDSVLVSDGSSNANLHGQSMFQI 367

[Close]

BLAST of Carg04999 vs. TrEMBL
Match: tr|A0A2I6SEV6|A0A2I6SEV6_9ROSI (SBP-box transcription factor OS=Betula luminifera OX=312789 GN=SPL18 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.7e-67
Identity = 159/312 (50.96%), Postives = 191/312 (61.22%), Query Frame = 0


Query: 21  SSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGRE 80
           SSSSS  TKR+R   +G QVPSC+VDGC+SDLSKCRDYHRRHKVCE HSKTPKVTI G+E
Sbjct: 3   SSSSSGSTKRARAASSGAQVPSCLVDGCTSDLSKCRDYHRRHKVCEDHSKTPKVTIRGQE 62

Query: 81  QRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATITLNAGRFLYSNQGPRFLP 140
           QRFCQQCSRFHSL EFD+ KRSCRKRLDGHNRRRRKPQP +  LN+GRFL   QG   L 
Sbjct: 63  QRFCQQCSRFHSLGEFDEGKRSCRKRLDGHNRRRRKPQPDSRPLNSGRFLSGYQGTTILT 122

Query: 141 FGN-QLLSTGNDLSSSWIGMIKPEHND--ALCSSNSQLDIADRRKSMFPG---------- 200
           F + Q+L  G  +SS+W+G +K + +D   LC+S S L++ DR+ S+ PG          
Sbjct: 123 FSSPQILPQGAVVSSAWLGPVKADTDDPAVLCNSYSHLNLCDRKNSINPGSLCHNYKGGK 182

Query: 201 -----------LSGCDYKEKQPPFLNVGSNNVGNVQKVVGNG---------CALSLL-ST 260
                      L G        P  N   +N  + QKV  NG         CALSLL ST
Sbjct: 183 QFHFSQGSSSSLPGASVSCLSLPDPNFAYSNASSSQKVFSNGSYRGIDDSDCALSLLSST 242

Query: 261 PVEAGEINNLTSMVQSN-------LIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRC 292
           P E  ++  L  M+Q N       L+PS H+   +GL  E   VS  LV+D SS+AN+  
Sbjct: 243 PAETRQV-GLGHMMQFNPINPAQSLVPSLHY---NGLRMEGKAVSSALVTDSSSNANLHS 302

The following BLAST results are available for this feature:

BLAST of Carg04999 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959623.1	1.1e-170	100.00	squamosa promoter-binding-like protein 16 isoform X2 [Cucurbita moschata]	[more]
XP_022959621.1	1.1e-170	100.00	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata] >XP_02...	[more]
XP_023513759.1	1.7e-163	95.96	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo...	[more]
XP_023513762.1	1.7e-163	95.96	squamosa promoter-binding-like protein 16 isoform X2 [Cucurbita pepo subsp. pepo...	[more]
XP_023004220.1	5.6e-162	95.96	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg04999 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50570.1	9.6e-39	45.13	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	9.6e-39	45.13	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT2G42200.1	1.1e-31	40.10	squamosa promoter binding protein-like 9	[more]
AT1G27370.1	1.3e-30	50.00	squamosa promoter binding protein-like 10	[more]
AT5G43270.2	6.2e-30	58.42	squamosa promoter binding protein-like 2	[more]

BLAST of Carg04999 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6YZE8\|SPL16_ORYSJ	8.8e-42	53.80	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q49I57\|TGA1B_MAIZE	3.5e-38	40.22	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1	[more]
sp\|Q49I55\|TGA1W_MAIZE	3.5e-38	40.22	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]
sp\|B9DI20\|SP13A_ARATH	1.7e-37	45.13	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
sp\|P0DI11\|SP13B_ARATH	1.7e-37	45.13	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]

BLAST of Carg04999 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KAG4\|A0A0A0KAG4_CUCSA	1.1e-129	75.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094760 PE=4 SV=1	[more]
tr\|A0A1S3CB53\|A0A1S3CB53_CUCME	7.1e-129	75.16	squamosa promoter-binding-like protein 16 OS=Cucumis melo OX=3656 GN=LOC10349885...	[more]
tr\|A0A061E606\|A0A061E606_THECC	2.6e-67	50.00	Squamosa promoter-binding protein transcription factor family protein, putative ...	[more]
tr\|A0A2C9UPR6\|A0A2C9UPR6_MANES	5.9e-67	50.65	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G009400 PE=4 SV=...	[more]
tr\|A0A2I6SEV6\|A0A2I6SEV6_9ROSI	7.7e-67	50.96	SBP-box transcription factor OS=Betula luminifera OX=312789 GN=SPL18 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR004333	SBP_dom
IPR036893	SBP_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04999-RA	Carg04999-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	G3DSA:4.10.1100.10		coord: 35..104 e-value: 1.3E-31 score: 110.4
IPR036893	SBP domain superfamily	SUPERFAMILY	SSF103612	SBT domain	coord: 41..122
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 43..116 e-value: 1.2E-28 score: 99.0
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 40..117 score: 31.744
None	No IPR available	PANTHER	PTHR31251:SF29	SUBFAMILY NOT NAMED	coord: 15..206 coord: 217..292
None	No IPR available	PANTHER	PTHR31251	FAMILY NOT NAMED	coord: 15..206 coord: 217..292

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04999	Cla001519	Watermelon (97103) v1	carwmB0083
Carg04999	Csa6G094760	Cucumber (Chinese Long) v2	carcuB0090
Carg04999	MELO3C022318	Melon (DHL92) v3.5.1	carmeB0082
Carg04999	ClCG06G002110	Watermelon (Charleston Gray)	carwcgB0082
Carg04999	CSPI06G07800	Wild cucumber (PI 183967)	carcpiB0094
Carg04999	Cucsa.349620	Cucumber (Gy14) v1	carcgyB0096
Carg04999	CmaCh08G001700	Cucurbita maxima (Rimu)	carcmaB0112
Carg04999	CmaCh17G014370	Cucurbita maxima (Rimu)	carcmaB0106
Carg04999	CmoCh08G001730	Cucurbita moschata (Rifu)	carcmoB0119
Carg04999	CmoCh17G013760	Cucurbita moschata (Rifu)	carcmoB0114
Carg04999	Lsi09G017300	Bottle gourd (USVL1VR-Ls)	carlsiB073
Carg04999	Cp4.1LG17g10620	Cucurbita pepo (Zucchini)	carcpeB0125
Carg04999	Cp4.1LG01g11890	Cucurbita pepo (Zucchini)	carcpeB0127
Carg04999	CsGy6G007860	Cucumber (Gy14) v2	carcgybB0090
Carg04999	MELO3C022318.2	Melon (DHL92) v3.6.1	carmedB0083
Carg04999	CsaV3_6G008180	Cucumber (Chinese Long) v3	carcucB0097
Carg04999	Cla97C06G111420	Watermelon (97103) v2	carwmbB0077
Carg04999	Bhi12G002174	Wax gourd	carwgoB0091

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg04999	Carg11596	Silver-seed gourd	carcarB010

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04999	Wild cucumber (PI 183967)	carcpiB0097
Carg04999	Cucumber (Chinese Long) v2	carcuB0093
Carg04999	Cucumber (Chinese Long) v3	carcucB0100
Carg04999	Bottle gourd (USVL1VR-Ls)	carlsiB070
Carg04999	Melon (DHL92) v3.5.1	carmeB0080
Carg04999	Melon (DHL92) v3.6.1	carmedB0081
Carg04999	Watermelon (Charleston Gray)	carwcgB0083
Carg04999	Watermelon (97103) v2	carwmbB0078