Cp4.1LG01g09400 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g09400
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pollen-specific protein
Location	Cp4.1LG01 : 4293062 .. 4293638 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCTGCTAATCTTGTTTGGATATTGATTGGCGTTTGTTTTGTGGTGGCGGCCTCTGCGCAGCCTCTGCAGAAGCCATTCATCGTCAATGGCTGCGTCTACTGTGACACTTGTCGCTGTGGCTTCGAGACCAACGCCTCCACTCCCATCTCTGGTTTGTATAATTCATCCAATCCTTACTATTAAATAGAAGCTGTTAGTGATTCTTAGTTGGTTTAAAAGGCTGAAATCAAATGAAACAGGTGCAATAGTGAGACTTGAATGCAGAGACAGAGCCAAATGGGTGTTGAAGTTCAGCAAAAAAGCCATCACCAATTCTGAAGGAAAATACACCATTCCTGTCTCTTACGATCACAAGGATGAGAGCTGCAAGATGGTTCTTGTGAGCAGCCCTCATCCCACCTGCAACCAGCCCGACCTCGGCCGAAACAGCGCCACCGTCATCCTCACCAACAACAACGGCCTCACCAACAATGTTCGCTATGCCAATGCCATGGGCTTCTTTACTCAACGCCCTCTCGCTCTCTGCCCCTCCCTCCTCAAACAATATCTCGACTACGACGAGTCATTGTAA

mRNA sequence

ATGGCCGCTGCTAATCTTGTTTGGATATTGATTGGCGTTTGTTTTGTGGTGGCGGCCTCTGCGCAGCCTCTGCAGAAGCCATTCATCGTCAATGGCTGCGTCTACTGTGACACTTGTCGCTGTGGCTTCGAGACCAACGCCTCCACTCCCATCTCTGGTGCAATAGTGAGACTTGAATGCAGAGACAGAGCCAAATGGGTGTTGAAGTTCAGCAAAAAAGCCATCACCAATTCTGAAGGAAAATACACCATTCCTGTCTCTTACGATCACAAGGATGAGAGCTGCAAGATGGTTCTTGTGAGCAGCCCTCATCCCACCTGCAACCAGCCCGACCTCGGCCGAAACAGCGCCACCGTCATCCTCACCAACAACAACGGCCTCACCAACAATGTTCGCTATGCCAATGCCATGGGCTTCTTTACTCAACGCCCTCTCGCTCTCTGCCCCTCCCTCCTCAAACAATATCTCGACTACGACGAGTCATTGTAA

Coding sequence (CDS)

ATGGCCGCTGCTAATCTTGTTTGGATATTGATTGGCGTTTGTTTTGTGGTGGCGGCCTCTGCGCAGCCTCTGCAGAAGCCATTCATCGTCAATGGCTGCGTCTACTGTGACACTTGTCGCTGTGGCTTCGAGACCAACGCCTCCACTCCCATCTCTGGTGCAATAGTGAGACTTGAATGCAGAGACAGAGCCAAATGGGTGTTGAAGTTCAGCAAAAAAGCCATCACCAATTCTGAAGGAAAATACACCATTCCTGTCTCTTACGATCACAAGGATGAGAGCTGCAAGATGGTTCTTGTGAGCAGCCCTCATCCCACCTGCAACCAGCCCGACCTCGGCCGAAACAGCGCCACCGTCATCCTCACCAACAACAACGGCCTCACCAACAATGTTCGCTATGCCAATGCCATGGGCTTCTTTACTCAACGCCCTCTCGCTCTCTGCCCCTCCCTCCTCAAACAATATCTCGACTACGACGAGTCATTGTAA

Protein sequence

MAAANLVWILIGVCFVVAASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDESL

Homology

[Close]

BLAST of Cp4.1LG01g09400 vs. Swiss-Prot
Match: DFC_ARATH (Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana GN=DFC PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.9e-28
Identity = 68/156 (43.59%), Postives = 91/156 (58.33%), Query Frame = 1


Query: 1   MAAANLVWILIGVCFVVAASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLEC 60
           MA + +  I +    V+  +A  +  PF + G VYCDTCR GFET A+  I GA VR+ C
Sbjct: 1   MAKSFVPLIAVLCVLVLPLAAMAVGTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVC 60

Query: 61  RDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVI 120
           +DR     +    A+T  +GKY + V  D +D+ C   LV SP   C + D GR++ATVI
Sbjct: 61  KDRVTLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVI 120

Query: 121 LTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYL 157
           LT +NG  +   YANAMGFF   PL  C +L K+YL
Sbjct: 121 LTRSNGAASTRHYANAMGFFRDEPLRGCAALRKRYL 156

[Close]

BLAST of Cp4.1LG01g09400 vs. Swiss-Prot
Match: CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.3e-27
Identity = 67/164 (40.85%), Postives = 97/164 (59.15%), Query Frame = 1


Query: 1   MAAANLVWILIGVCFVV--AASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRL 60
           MA    V++L+G   V+  A  A   +  F V G VYCDTCR  F T  ST + GA V+L
Sbjct: 1   MAKCQAVFLLVGALCVLSLAGVANAAENHFKVQGMVYCDTCRIQFMTRISTIMEGATVKL 60

Query: 61  ECRDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPD---LGRN 120
           ECR+       F  +A+T+  G+Y+IPV+ D +D+ C++ LV SP+  C++       + 
Sbjct: 61  ECRNITAGTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQ 120

Query: 121 SATVILTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYD 160
           SA V LT+NNG  +++R ANA+GF  + PL  CP +LK+   YD
Sbjct: 121 SAKVSLTSNNGEASDIRSANALGFMRKEPLKECPEVLKELDLYD 164

[Close]

BLAST of Cp4.1LG01g09400 vs. Swiss-Prot
Match: PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.1e-26
Identity = 61/154 (39.61%), Postives = 99/154 (64.29%), Query Frame = 1


Query: 9   ILIGVCFVV--AASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKW 68
           +++ +C V+  AA+  P    +++ G VYCDTCR GF TN +  I+GA VRLEC+     
Sbjct: 14  VILCLCVVLSCAAADDPNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFGTG 73

Query: 69  VLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNG 128
            L+ +   +T++ G YTI +   H+++ C++VLV+SP   C++    R+ A V+LT N G
Sbjct: 74  KLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNVG 133

Query: 129 LTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 161
           +++++R AN +G+F   PL +C +LLKQ LD D+
Sbjct: 134 ISDSLRPANPLGYFKDVPLPVCAALLKQ-LDSDD 166

[Close]

BLAST of Cp4.1LG01g09400 vs. Swiss-Prot
Match: PHLB_PHLPR (Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-23
Identity = 55/129 (42.64%), Postives = 77/129 (59.69%), Query Frame = 1


Query: 28  FIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKWVLKFSKKAITNSEGKYTIPVS 87
           F+V G VYCD CR GFETN S  + GA V ++CR       K   +A T+  G Y I + 
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEID 65

Query: 88  YDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNGL-TNNVRYANAMGFFTQRPLA 147
            DH++E C++VL  SP  TC++ +  R+ A V LT+NNG+    +RYAN + FF + PL 
Sbjct: 66  QDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLK 125

Query: 148 LCPSLLKQY 156
            C  +L+ Y
Sbjct: 126 ECGGILQAY 134

[Close]

BLAST of Cp4.1LG01g09400 vs. Swiss-Prot
Match: LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 53/129 (41.09%), Postives = 77/129 (59.69%), Query Frame = 1


Query: 28  FIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKWVLKFSKKAITNSEGKYTIPVS 87
           F+V G VYCD CR GFETN S  + GA V ++CR       K   +A T+ +G Y I + 
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEID 65

Query: 88  YDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNGL-TNNVRYANAMGFFTQRPLA 147
            DH++E C++VL  SP  +C++ +  R+ A V LT+N G+    +RYAN + FF + PL 
Sbjct: 66  QDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPLK 125

Query: 148 LCPSLLKQY 156
            C  +L+ Y
Sbjct: 126 ECGGILQAY 134

[Close]

BLAST of Cp4.1LG01g09400 vs. TrEMBL
Match: A0A0A0KUJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G028420 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 5.4e-61
Identity = 118/163 (72.39%), Postives = 134/163 (82.21%), Query Frame = 1


Query: 1   MAAANLVWILIGVCFVVAASAQPLQKP-FIVNGCVYCDTCRCGFETNASTPISGAIVRLE 60
           M  + L  +LIGVCF+V     P     F+VNGCVYCDTCRCGFETN STPISGA VRLE
Sbjct: 1   MPTSTLFKLLIGVCFLVLLHGLPASAQLFVVNGCVYCDTCRCGFETNVSTPISGAKVRLE 60

Query: 61  CRDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATV 120
           CRDRA WVLKF+K+AIT+S+GKY I V  DHKDESCK+VLVSSPH  CN+PD+GRNSATV
Sbjct: 61  CRDRATWVLKFTKEAITDSKGKYKINVYEDHKDESCKVVLVSSPHLGCNRPDVGRNSATV 120

Query: 121 ILTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDESL 163
           ILTNNNGLT+  RYANAMGF  +RPLA CP++LKQYLD+DESL
Sbjct: 121 ILTNNNGLTSIFRYANAMGFLIRRPLAFCPTILKQYLDFDESL 163

[Close]

BLAST of Cp4.1LG01g09400 vs. TrEMBL
Match: A9PHV1_POPTR (Pollen Ole e 1 allergen and extensin family protein OS=Populus trichocarpa GN=POPTR_0005s16600g PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 9.3e-37
Identity = 78/156 (50.00%), Postives = 106/156 (67.95%), Query Frame = 1


Query: 7   VWILIGVCFVVAA--SAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRA 66
           V +L+ +C + A   +A+P + PF+V G VYCDTC  GFET+ +T I+GA VRLEC+DR 
Sbjct: 4   VLLLLALCVLPALVRAARPARNPFVVQGSVYCDTCLAGFETSKTTNIAGAKVRLECKDRK 63

Query: 67  KWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNN 126
              L +SK+  T+S GKYTI V  DH+D+ C  +LVSSP   C  P  GR+ A VILTN+
Sbjct: 64  TQDLVYSKEGTTDSTGKYTITVDEDHEDQICDCMLVSSPRKDCRSPSAGRDRARVILTND 123

Query: 127 NGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 161
           NGL +  RYANAMGF   +P++ C  LL+ Y +Y++
Sbjct: 124 NGLVSTTRYANAMGFMAAQPMSGCTELLRLYQEYED 159

[Close]

BLAST of Cp4.1LG01g09400 vs. TrEMBL
Match: E2LMG1_MONPE (Uncharacterized protein OS=Moniliophthora perniciosa (strain FA553 / isolate CP02) GN=MPER_07958 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-34
Identity = 75/154 (48.70%), Postives = 105/154 (68.18%), Query Frame = 1


Query: 9   ILIGVCFV---VAASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAK 68
           +L+ +C +   +A +A+P + P  V G VYCDTCR GFET AST I+GA V++EC+DR  
Sbjct: 6   VLLALCCLLPAIAFAARPARNPLTVTGKVYCDTCRAGFETPASTYIAGAKVKVECKDRTS 65

Query: 69  WVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNN 128
             L +S++A T+S G Y + VS DH+D+ C  +L+SSP P C +P  GR+ A VILT  N
Sbjct: 66  MKLLYSQEATTDSTGTYKLFVSEDHQDQLCDAMLLSSPQPNCQKPAAGRDRARVILTRYN 125

Query: 129 GLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYD 160
           G+ ++ RYAN MGF   +PLA C  +L+QY D+D
Sbjct: 126 GIVSDTRYANNMGFEMDQPLAGCTQVLQQYQDFD 159

[Close]

BLAST of Cp4.1LG01g09400 vs. TrEMBL
Match: B9RJG6_RICCO (Pollen-specific protein C13, putative OS=Ricinus communis GN=RCOM_1034130 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.3e-34
Identity = 74/154 (48.05%), Postives = 106/154 (68.83%), Query Frame = 1


Query: 9   ILIGVCFVVA--ASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKW 68
           +L+ +C + A  A+A+P + PF V G VYCDTCR GFET+ +T ++GA VR+EC+DR   
Sbjct: 6   LLLALCVLPALVAAARPARNPFEVEGRVYCDTCRAGFETSKTTYVAGAKVRVECKDRKTM 65

Query: 69  VLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNG 128
            L +SK+  T+S G Y I V  DH+D+ C  +LVSSP   C +P  GR+ A VILTNNNG
Sbjct: 66  ELVYSKEGTTDSTGTYRIHVDEDHQDQLCDAMLVSSPQHDCMKPSSGRDRARVILTNNNG 125

Query: 129 LTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 161
           + +N RYAN++GF  +  ++ C  LL+QY +Y++
Sbjct: 126 IVSNKRYANSIGFMKEDAMSGCFELLRQYQEYED 159

[Close]

BLAST of Cp4.1LG01g09400 vs. TrEMBL
Match: Q9SES4_SAMNI (Allergen-like protein BRSn20 OS=Sambucus nigra GN=BRSn20 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.6e-34
Identity = 72/148 (48.65%), Postives = 105/148 (70.95%), Query Frame = 1


Query: 9   ILIGVCFV-VAASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKWV 68
           +L+ + F+ +  SA+ +  PF++ G VYCDTCR GFET+A+  + GA VR+EC+DR    
Sbjct: 6   LLVALSFLPLLTSARLIGNPFLLKGSVYCDTCRAGFETDATKYLHGARVRIECKDRDTLR 65

Query: 69  LKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNGL 128
           L +S +A+T+S+GKY++ VS DH D+ C  +LVSSP P C  PD GR+ A VILT +NG+
Sbjct: 66  LTYSDEAVTDSKGKYSVLVSDDHGDQMCDAILVSSPDPECAVPDKGRDRACVILTRSNGM 125

Query: 129 TNNVRYANAMGFFTQRPLALCPSLLKQY 156
           T++ R+ANAMGF    P+A C  +L++Y
Sbjct: 126 TSDERFANAMGFLKNEPMAGCTQILQKY 153

[Close]

BLAST of Cp4.1LG01g09400 vs. TAIR10
Match: AT4G08685.1 (AT4G08685.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-30
Identity = 66/154 (42.86%), Postives = 96/154 (62.34%), Query Frame = 1


Query: 9   ILIGVCFV--VAASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKW 68
           +L+ +CF+  +A +A+P + PF+V G VYCDTC  GFET AST ISGA+VRLEC+DR   
Sbjct: 6   LLVALCFLPALAIAARPNKNPFVVRGRVYCDTCLAGFETPASTYISGAVVRLECKDRRTM 65

Query: 69  VLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNG 128
            L +S +A T+S G Y I V+ DH ++ C  +LV S    C+    G + A V LT  NG
Sbjct: 66  ELTYSHEARTDSTGSYKILVNEDHDEQFCDAMLVRSSQLRCSNVSPGHDRARVTLTRFNG 125

Query: 129 LTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 161
           + ++ R+AN MGF     +  C  ++K Y + ++
Sbjct: 126 IASDDRFANNMGFLRDAAMPGCADIMKLYQETED 159

[Close]

BLAST of Cp4.1LG01g09400 vs. TAIR10
Match: AT5G10130.1 (AT5G10130.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-29
Identity = 68/156 (43.59%), Postives = 91/156 (58.33%), Query Frame = 1


Query: 1   MAAANLVWILIGVCFVVAASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLEC 60
           MA + +  I +    V+  +A  +  PF + G VYCDTCR GFET A+  I GA VR+ C
Sbjct: 1   MAKSFVPLIAVLCVLVLPLAAMAVGTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVC 60

Query: 61  RDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVI 120
           +DR     +    A+T  +GKY + V  D +D+ C   LV SP   C + D GR++ATVI
Sbjct: 61  KDRVTLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVI 120

Query: 121 LTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYL 157
           LT +NG  +   YANAMGFF   PL  C +L K+YL
Sbjct: 121 LTRSNGAASTRHYANAMGFFRDEPLRGCAALRKRYL 156

[Close]

BLAST of Cp4.1LG01g09400 vs. TAIR10
Match: AT1G29140.1 (AT1G29140.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 111.3 bits (277), Expect = 5.6e-25
Identity = 63/163 (38.65%), Postives = 93/163 (57.06%), Query Frame = 1


Query: 1   MAAANLVWILIGVCFVV-----AASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAI 60
           MA   +V++   +CF       AA A    K F + G VYCDTCR  F T  S  + GA 
Sbjct: 1   MAKFFIVFLASALCFTTLVHFTAADADDFDK-FHIKGSVYCDTCRVQFITRISKFLEGAK 60

Query: 61  VRLECRDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTC---NQPDL 120
           V+LEC+ R    +  +K+A+T++ G Y + V  DH++E C++VL+ SP P C   N  + 
Sbjct: 61  VKLECKGRENQTVTLTKEAVTDNAGNYQMEVMGDHEEEVCEIVLLQSPDPECGDVNNQEF 120

Query: 121 GRNSATVILTNNNGL-TNNVRYANAMGFFTQRPLALCPSLLKQ 155
            RN+A + LT N+G+ +N  R  N +GF  + PLA CP + K+
Sbjct: 121 LRNAARISLTANDGIVSNETRTINPLGFMRKTPLAECPQVFKE 162

[Close]

BLAST of Cp4.1LG01g09400 vs. TAIR10
Match: AT5G45880.1 (AT5G45880.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 108.2 bits (269), Expect = 4.7e-24
Identity = 57/141 (40.43%), Postives = 82/141 (58.16%), Query Frame = 1


Query: 18  AASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKWVLKFSKKAITN 77
           AA A    + F + G VYCDTCR  F T  S  + GA V+LECR R    +  +K+A+T+
Sbjct: 26  AADADDFDR-FQIQGSVYCDTCRVQFVTRLSKFLEGAKVKLECRSRTNGTITLTKEAVTD 85

Query: 78  SEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLG---RNSATVILTNNNGL-TNNVRY 137
             G Y + V+ DH++E C++VLV SP   C+        RN+A + LT N+G+ ++  R 
Sbjct: 86  KTGSYKMEVTGDHEEEVCELVLVQSPDSGCSDVSTEAYLRNAAKISLTANDGIVSHETRI 145

Query: 138 ANAMGFFTQRPLALCPSLLKQ 155
            N +GF  Q PLA CP+  K+
Sbjct: 146 VNPLGFMVQTPLADCPAAFKE 165

[Close]

BLAST of Cp4.1LG01g09400 vs. TAIR10
Match: AT1G78040.1 (AT1G78040.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 105.1 bits (261), Expect = 4.0e-23
Identity = 53/134 (39.55%), Postives = 82/134 (61.19%), Query Frame = 1


Query: 29  IVNGCVYCDTCRCGFETNASTP-ISGAIVRLECRDRAKWVLKFSKKAITNSEGKYTIPVS 88
           +V G  YCD C+ GFET  S+  I GA V+L C+DR      ++ KA+++ EGKY   V 
Sbjct: 31  VVQGSTYCDICKFGFETPESSYFIPGATVKLSCKDRKTMEEVYTDKAVSDKEGKYKFIVH 90

Query: 89  YDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNGLTNNVRYANAMGFFTQRPLAL 148
            DH+D+ C ++LV S   TC++  +GR  + VIL + +G+ + +R+AN MGF  +     
Sbjct: 91  DDHRDQMCDVLLVKSSDKTCSKISVGREKSRVILNHYSGIASQIRHANNMGFEKEVSDVF 150

Query: 149 CPSLLKQYL-DYDE 161
           C +L ++Y+ D DE
Sbjct: 151 CSALFQKYMVDEDE 164

[Close]

BLAST of Cp4.1LG01g09400 vs. NCBI nr
Match: gi|659107680|ref|XP_008453801.1| (PREDICTED: major pollen allergen Lol p 11-like [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 1.2e-61
Identity = 118/163 (72.39%), Postives = 135/163 (82.82%), Query Frame = 1


Query: 1   MAAANLVWILIGVCFVVAASAQPLQKP-FIVNGCVYCDTCRCGFETNASTPISGAIVRLE 60
           MA +NL  +LIGVCF+V     P     F+VNGCVYCDTCRCGFETN STP+SGA VRLE
Sbjct: 1   MATSNLFKLLIGVCFLVLLHGLPASAQLFVVNGCVYCDTCRCGFETNVSTPVSGAKVRLE 60

Query: 61  CRDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATV 120
           CRDRA WVLKF+K+A TNS+GKY I V  DHKDESCK+VLVSSPH  C++PD+GRNSATV
Sbjct: 61  CRDRATWVLKFTKEATTNSKGKYKIDVYEDHKDESCKVVLVSSPHRGCDRPDIGRNSATV 120

Query: 121 ILTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDESL 163
           ILTNNNGLT+  RYANAMGF  +RPLA CP++LKQYLD+DESL
Sbjct: 121 ILTNNNGLTSISRYANAMGFLIRRPLAFCPTILKQYLDFDESL 163

[Close]

BLAST of Cp4.1LG01g09400 vs. NCBI nr
Match: gi|778690432|ref|XP_011653120.1| (PREDICTED: major pollen allergen Lol p 11-like [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 7.8e-61
Identity = 118/163 (72.39%), Postives = 134/163 (82.21%), Query Frame = 1


Query: 1   MAAANLVWILIGVCFVVAASAQPLQKP-FIVNGCVYCDTCRCGFETNASTPISGAIVRLE 60
           M  + L  +LIGVCF+V     P     F+VNGCVYCDTCRCGFETN STPISGA VRLE
Sbjct: 1   MPTSTLFKLLIGVCFLVLLHGLPASAQLFVVNGCVYCDTCRCGFETNVSTPISGAKVRLE 60

Query: 61  CRDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATV 120
           CRDRA WVLKF+K+AIT+S+GKY I V  DHKDESCK+VLVSSPH  CN+PD+GRNSATV
Sbjct: 61  CRDRATWVLKFTKEAITDSKGKYKINVYEDHKDESCKVVLVSSPHLGCNRPDVGRNSATV 120

Query: 121 ILTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDESL 163
           ILTNNNGLT+  RYANAMGF  +RPLA CP++LKQYLD+DESL
Sbjct: 121 ILTNNNGLTSIFRYANAMGFLIRRPLAFCPTILKQYLDFDESL 163

[Close]

BLAST of Cp4.1LG01g09400 vs. NCBI nr
Match: gi|743924089|ref|XP_011006159.1| (PREDICTED: pollen-specific protein C13-like [Populus euphratica])

HSP 1 Score: 162.9 bits (411), Expect = 4.6e-37
Identity = 79/156 (50.64%), Postives = 104/156 (66.67%), Query Frame = 1


Query: 7   VWILIGVCFVVAA--SAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRA 66
           V +L+ +C + A   +A+P + PF+V G VYCDTC  GFET+ +T I+GA VRLEC+DR 
Sbjct: 4   VLLLLALCVLPALVRAARPARNPFVVQGSVYCDTCLAGFETSKTTNIAGAKVRLECKDRK 63

Query: 67  KWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNN 126
              L +SK+  T+S GKYTI V  DHKD+ C  +LVSSP   C  P  GR+ A VILTNN
Sbjct: 64  TQDLVYSKEGTTDSTGKYTITVDEDHKDQICDCMLVSSPRKDCRSPSAGRDRARVILTNN 123

Query: 127 NGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 161
           NGL +  RY NAMGF    P++ C  LL+ Y +Y++
Sbjct: 124 NGLVSTTRYVNAMGFMAAHPMSGCTELLRLYQEYED 159

[Close]

BLAST of Cp4.1LG01g09400 vs. NCBI nr
Match: gi|224084708|ref|XP_002307393.1| (pollen Ole e 1 allergen and extensin family protein [Populus trichocarpa])

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-36
Identity = 78/156 (50.00%), Postives = 106/156 (67.95%), Query Frame = 1


Query: 7   VWILIGVCFVVAA--SAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRA 66
           V +L+ +C + A   +A+P + PF+V G VYCDTC  GFET+ +T I+GA VRLEC+DR 
Sbjct: 4   VLLLLALCVLPALVRAARPARNPFVVQGSVYCDTCLAGFETSKTTNIAGAKVRLECKDRK 63

Query: 67  KWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNN 126
              L +SK+  T+S GKYTI V  DH+D+ C  +LVSSP   C  P  GR+ A VILTN+
Sbjct: 64  TQDLVYSKEGTTDSTGKYTITVDEDHEDQICDCMLVSSPRKDCRSPSAGRDRARVILTND 123

Query: 127 NGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 161
           NGL +  RYANAMGF   +P++ C  LL+ Y +Y++
Sbjct: 124 NGLVSTTRYANAMGFMAAQPMSGCTELLRLYQEYED 159

[Close]

BLAST of Cp4.1LG01g09400 vs. NCBI nr
Match: gi|747099105|ref|XP_011097595.1| (PREDICTED: major pollen allergen Lol p 11-like [Sesamum indicum])

HSP 1 Score: 156.0 bits (393), Expect = 5.6e-35
Identity = 73/158 (46.20%), Postives = 106/158 (67.09%), Query Frame = 1


Query: 4   ANLVWILIGVCFVVA-ASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRD 63
           A  + +L  +C V +  +A+    P ++ GCVYCDTCRCG+ET+A+  ++GA+VR+ECR 
Sbjct: 2   AKFLLVLFALCVVPSIVTARFANDPLLLTGCVYCDTCRCGYETSATKYLAGAVVRVECRK 61

Query: 64  RAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILT 123
           R    L ++K+A+T+S G Y I V  D  D+ C  VLV SP P C+ P+ GR+ A VILT
Sbjct: 62  RDSSELTYTKEAVTDSTGHYKILVETDRGDDYCDSVLVKSPDPECSIPNAGRDRARVILT 121

Query: 124 NNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 161
            NNG+ +N R+ANA+GF    PLA CP +L+QY + ++
Sbjct: 122 RNNGMNSNARFANALGFLKNTPLASCPQVLQQYQEAED 159

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g09400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DFC_ARATH	3.9e-28	43.59	Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana GN=DFC PE=2 SV=1	[more]
CHE1_CHEAL	7.3e-27	40.85	Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1	[more]
PSC13_MAIZE	8.1e-26	39.61	Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1	[more]
PHLB_PHLPR	2.2e-23	42.64	Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1	[more]
LOLB_LOLPR	1.1e-22	41.09	Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1	[more]

BLAST of Cp4.1LG01g09400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUJ2_CUCSA	5.4e-61	72.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G028420 PE=4 SV=1	[more]
A9PHV1_POPTR	9.3e-37	50.00	Pollen Ole e 1 allergen and extensin family protein OS=Populus trichocarpa GN=PO...	[more]
E2LMG1_MONPE	1.5e-34	48.70	Uncharacterized protein OS=Moniliophthora perniciosa (strain FA553 / isolate CP0...	[more]
B9RJG6_RICCO	3.3e-34	48.05	Pollen-specific protein C13, putative OS=Ricinus communis GN=RCOM_1034130 PE=4 S...	[more]
Q9SES4_SAMNI	9.6e-34	48.65	Allergen-like protein BRSn20 OS=Sambucus nigra GN=BRSn20 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g09400 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08685.1	1.5e-30	42.86	Pollen Ole e 1 allergen and extensin family protein	[more]
AT5G10130.1	2.2e-29	43.59	Pollen Ole e 1 allergen and extensin family protein	[more]
AT1G29140.1	5.6e-25	38.65	Pollen Ole e 1 allergen and extensin family protein	[more]
AT5G45880.1	4.7e-24	40.43	Pollen Ole e 1 allergen and extensin family protein	[more]
AT1G78040.1	4.0e-23	39.55	Pollen Ole e 1 allergen and extensin family protein	[more]

BLAST of Cp4.1LG01g09400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107680\|ref\|XP_008453801.1\|	1.2e-61	72.39	PREDICTED: major pollen allergen Lol p 11-like [Cucumis melo]	[more]
gi\|778690432\|ref\|XP_011653120.1\|	7.8e-61	72.39	PREDICTED: major pollen allergen Lol p 11-like [Cucumis sativus]	[more]
gi\|743924089\|ref\|XP_011006159.1\|	4.6e-37	50.64	PREDICTED: pollen-specific protein C13-like [Populus euphratica]	[more]
gi\|224084708\|ref\|XP_002307393.1\|	1.3e-36	50.00	pollen Ole e 1 allergen and extensin family protein [Populus trichocarpa]	[more]
gi\|747099105\|ref\|XP_011097595.1\|	5.6e-35	46.20	PREDICTED: major pollen allergen Lol p 11-like [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g09400.1	Cp4.1LG01g09400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31614	FAMILY NOT NAMED	coord: 1..160 score: 3.1
None	No IPR available	PANTHER	PTHR31614:SF5	ALLERGEN-LIKE PROTEIN BRSN20-RELATED	coord: 1..160 score: 3.1
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_I	coord: 30..112 score: 6.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g09400	CmoCh04G008680	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g09400	Csa4G028420	Cucumber (Chinese Long) v2	cpecuB405
Cp4.1LG01g09400	MELO3C017593	Melon (DHL92) v3.5.1	cpemeB432
Cp4.1LG01g09400	CSPI04G04600	Wild cucumber (PI 183967)	cpecpiB403
Cp4.1LG01g09400	Lsi07G001650	Bottle gourd (USVL1VR-Ls)	cpelsiB375
Cp4.1LG01g09400	MELO3C017593.2	Melon (DHL92) v3.6.1	cpemedB504
Cp4.1LG01g09400	CsaV3_UNG146130	Cucumber (Chinese Long) v3	cpecucB0515
Cp4.1LG01g09400	CsaV3_UNG137040	Cucumber (Chinese Long) v3	cpecucB0514
Cp4.1LG01g09400	CsGy4G004540	Cucumber (Gy14) v2	cgybcpeB507
Cp4.1LG01g09400	Carg14207	Silver-seed gourd	carcpeB1302

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g09400	Cucumber (Chinese Long) v3	cpecucB0504
Cp4.1LG01g09400	Cucumber (Chinese Long) v3	cpecucB0516
Cp4.1LG01g09400	Cucumber (Chinese Long) v3	cpecucB0581
Cp4.1LG01g09400	Wax gourd	cpewgoB0511
Cp4.1LG01g09400	Cucurbita pepo (Zucchini)	cpecpeB073
Cp4.1LG01g09400	Cucurbita pepo (Zucchini)	cpecpeB233
Cp4.1LG01g09400	Cucurbita pepo (Zucchini)	cpecpeB385
Cp4.1LG01g09400	Cucumber (Gy14) v1	cgycpeB0001
Cp4.1LG01g09400	Cucumber (Gy14) v1	cgycpeB0190
Cp4.1LG01g09400	Cucumber (Gy14) v1	cgycpeB0219
Cp4.1LG01g09400	Cucurbita maxima (Rimu)	cmacpeB350
Cp4.1LG01g09400	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g09400	Cucurbita maxima (Rimu)	cmacpeB876
Cp4.1LG01g09400	Cucurbita moschata (Rifu)	cmocpeB312
Cp4.1LG01g09400	Cucurbita moschata (Rifu)	cmocpeB613
Cp4.1LG01g09400	Cucurbita moschata (Rifu)	cmocpeB813
Cp4.1LG01g09400	Wild cucumber (PI 183967)	cpecpiB406
Cp4.1LG01g09400	Wild cucumber (PI 183967)	cpecpiB468
Cp4.1LG01g09400	Cucumber (Chinese Long) v2	cpecuB407
Cp4.1LG01g09400	Cucumber (Chinese Long) v2	cpecuB469
Cp4.1LG01g09400	Bottle gourd (USVL1VR-Ls)	cpelsiB326
Cp4.1LG01g09400	Bottle gourd (USVL1VR-Ls)	cpelsiB377
Cp4.1LG01g09400	Watermelon (Charleston Gray)	cpewcgB374
Cp4.1LG01g09400	Watermelon (Charleston Gray)	cpewcgB404
Cp4.1LG01g09400	Watermelon (97103) v1	cpewmB406
Cp4.1LG01g09400	Watermelon (97103) v1	cpewmB443
Cp4.1LG01g09400	Melon (DHL92) v3.5.1	cpemeB416
Cp4.1LG01g09400	Melon (DHL92) v3.5.1	cpemeB434
Cp4.1LG01g09400	Cucumber (Gy14) v2	cgybcpeB509
Cp4.1LG01g09400	Cucumber (Gy14) v2	cgybcpeB808
Cp4.1LG01g09400	Melon (DHL92) v3.6.1	cpemedB487
Cp4.1LG01g09400	Melon (DHL92) v3.6.1	cpemedB509
Cp4.1LG01g09400	Silver-seed gourd	carcpeB0562
Cp4.1LG01g09400	Silver-seed gourd	carcpeB1417