CmoCh04G008680 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G008680
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPollen Ole e I family allergen
LocationCmo_Chr04 : 4341530 .. 4343358 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCTAAGGTCAGTAAAGATTACTGTTTTAGTCAAATTAGAAGCTGTTGGGTTGGGATTAATTCAGATCTTAAAGCTTTCCACATGCTAATGATATCTTTCTTTCGTATTGGGATTGGGAGGCTACTTGAGCTGGAGACAAATAGGTACCTACTTGAGCCTCTCACTTTTCACATAGGACAATGAAGCATAGCGTGGATGAAAACTTTGAAATTTCTAAATCCCATAACCCCTTTTGTTTGCTTCTCCAATCAATCTTTCTTTGTGCATCCTGGAATAGCCTAAGTCACAACCTTTATGCGGATTTCCTTACCACCTGTTCCTTCAGTCCTATAAGCCCTTCCATGCTCTGTTCTTCACTTCTTTAAACATAGGACACTGACTTGGCTGTGTTCATTGTCTGACCCCTCGCTTTCTCCTTGTCTTTTACAGACTTCTTTGATTGCATGCCTCTCCTATAAGCTGTTCTTCCAAGAAGAAAATGGTGTCATCTGTAAAAAAAAAAGAGAGGTGAGTTAAAGTAGGACAAAAGGTTGCCAAGAGGTGGAGGATCGAACCTAAGTGGTTTTGCTTTTGGTCCCTCAAAAAGTCTTGTACGAATGGAGATAGTAATCCTTACTTATAAATTCACGATCTTCTTAATTAATCAATGTAGAACTCCTTGCAACCATCCTCAACGTAGTGAAATCAAATCTCTAGAAGCGGGATAATTCTGATACGAGCGTTAAAATCATTGTTAAAGTCACTTTTGTTACGTTCAGCATCACTCTAAAACATGTCGGATATGAGCGTTGATGGGTAGAGGAGGAATCTGGAAATGGAAGACTGGATCCGCCATCTCCTACCTTGATTTAAAAGCAAAGGTGGGAGGGATATTAAAGTCAACCTCCGACTATCCCTGCATTTGGATCTGCTAATTCCAATGCCAATTTTTTAGCTCTTTTATTTAGCTGTTTCACATGCACTCACAACCTACACATTTCTTCTCTTCTTAAAACTCAGTTCTTACAAAATTTATAAATTATGGAGAACAGAATGGAAACGTAGCTAATAAATCAAATAAACAAGTGGTGACTGCGAAAGTGAAGGGGGAAAGCACGTTGCAGCATTTATGGTTTCACACAAATCCAAGTCTCTCCATTGCCTTTTAAATATCACCAAACAAATGGACCCTCTTAAACCTCTCCTCCTCATTTTCTTCATCTTCTTTGTCTGTCCTTTGCAGTAGTTACAGCTATGGCAGCTGCTGTTGCTAATCTTTTTTGGATATTGATTGGCGTTTGTTTTGTGGTGGCGGCCTCTGCGCAGCCTCTGCAGAAGCCATTCATCGTCAATGGCTGCGTCTACTGTGACACTTGTCGCTGTGGCTTCGAGACCAACGCCTCCACTCCCATCTCTGGTTTGTATAATTCATCCAACCCTTGCTATTAAATAGAAGCTGTTAGTGATTCTTAGTTGGTTTAAAAGGCTGAAATCAAATGAAACAGGTGCAATAGTGAGACTTGAATGTAGAGACAGAGCCAAATGGGTGTTGAAGTTCAGCAAAAAAGCCATCACCAATTCTGAAGGAAAATACACCATTCCTGTCTCTTACGATCACAAGGATGAGAGCTGCAAGATGGTTCTTGTGAGCAGCCCTCATCCCACCTGCAACCAGCCGGACCTCGGCCGAAACAGCGCCACCGTCATCCTCACCAACAACAATGGCCTCACCAACAATGTTCGCTATGCCAATGCCATGGGCTTCTTTACTCAACGCCCTCTCGCTCTCTGCCCCTCCCTCCTCAAACAATATCTCGACTACGACGAGTCGTTGTAAGACATCA

mRNA sequence

ATGAAATCTAAGGTCAGTAAAGATTACTGTTTTAGTCAAATTAGAAGCTGTTGGGTTGGGATTAATTCAGATCTTAAAGCTTTCCACATGCTAATGATATCTTTCTTTCGTATTGGGATTGGGAGGCTACTTGAGCTGGAGACAAATAGGACACTGACTTGGCTGTGTTCATTGTCTGACCCCTCGCTTTCTCCTTGTCTTTTACAGACTTCTTTGATTGCATGCCTCTCCTATAAGCTGTTCTTCCAAGAAGAAAATGGTGTCATCTTAGTTACAGCTATGGCAGCTGCTGTTGCTAATCTTTTTTGGATATTGATTGGCGTTTGTTTTGTGGTGGCGGCCTCTGCGCAGCCTCTGCAGAAGCCATTCATCGTCAATGGCTGCGTCTACTGTGACACTTGTCGCTGTGGCTTCGAGACCAACGCCTCCACTCCCATCTCTGGTGCAATAGTGAGACTTGAATGTAGAGACAGAGCCAAATGGGTGTTGAAGTTCAGCAAAAAAGCCATCACCAATTCTGAAGGAAAATACACCATTCCTGTCTCTTACGATCACAAGGATGAGAGCTGCAAGATGGTTCTTGTGAGCAGCCCTCATCCCACCTGCAACCAGCCGGACCTCGGCCGAAACAGCGCCACCGTCATCCTCACCAACAACAATGGCCTCACCAACAATGTTCGCTATGCCAATGCCATGGGCTTCTTTACTCAACGCCCTCTCGCTCTCTGCCCCTCCCTCCTCAAACAATATCTCGACTACGACGAGTCGTTGTAAGACATCA

Coding sequence (CDS)

ATGAAATCTAAGGTCAGTAAAGATTACTGTTTTAGTCAAATTAGAAGCTGTTGGGTTGGGATTAATTCAGATCTTAAAGCTTTCCACATGCTAATGATATCTTTCTTTCGTATTGGGATTGGGAGGCTACTTGAGCTGGAGACAAATAGGACACTGACTTGGCTGTGTTCATTGTCTGACCCCTCGCTTTCTCCTTGTCTTTTACAGACTTCTTTGATTGCATGCCTCTCCTATAAGCTGTTCTTCCAAGAAGAAAATGGTGTCATCTTAGTTACAGCTATGGCAGCTGCTGTTGCTAATCTTTTTTGGATATTGATTGGCGTTTGTTTTGTGGTGGCGGCCTCTGCGCAGCCTCTGCAGAAGCCATTCATCGTCAATGGCTGCGTCTACTGTGACACTTGTCGCTGTGGCTTCGAGACCAACGCCTCCACTCCCATCTCTGGTGCAATAGTGAGACTTGAATGTAGAGACAGAGCCAAATGGGTGTTGAAGTTCAGCAAAAAAGCCATCACCAATTCTGAAGGAAAATACACCATTCCTGTCTCTTACGATCACAAGGATGAGAGCTGCAAGATGGTTCTTGTGAGCAGCCCTCATCCCACCTGCAACCAGCCGGACCTCGGCCGAAACAGCGCCACCGTCATCCTCACCAACAACAATGGCCTCACCAACAATGTTCGCTATGCCAATGCCATGGGCTTCTTTACTCAACGCCCTCTCGCTCTCTGCCCCTCCCTCCTCAAACAATATCTCGACTACGACGAGTCGTTGTAA
Homology
[Close]
BLAST of CmoCh04G008680 vs. Swiss-Prot
Match: DFC_ARATH (Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana GN=DFC PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.1e-28
Identity = 70/156 (44.87%), Postives = 91/156 (58.33%), Query Frame = 1 

Query: 98  VANLFWILIGVC--FVVAASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLEC 157
           +A  F  LI V    V+  +A  +  PF + G VYCDTCR GFET A+  I GA VR+ C
Sbjct: 1   MAKSFVPLIAVLCVLVLPLAAMAVGTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVC 60

Query: 158 RDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVI 217
           +DR     +    A+T  +GKY + V  D +D+ C   LV SP   C + D GR++ATVI
Sbjct: 61  KDRVTLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVI 120

Query: 218 LTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYL 252
           LT +NG  +   YANAMGFF   PL  C +L K+YL
Sbjct: 121 LTRSNGAASTRHYANAMGFFRDEPLRGCAALRKRYL 156

[Close]
BLAST of CmoCh04G008680 vs. Swiss-Prot
Match: CHE1_CHEAL (Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-25
Identity = 64/157 (40.76%), Postives = 94/157 (59.87%), Query Frame = 1 

Query: 103 WILIGVCFVV--AASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAK 162
           ++L+G   V+  A  A   +  F V G VYCDTCR  F T  ST + GA V+LECR+   
Sbjct: 8   FLLVGALCVLSLAGVANAAENHFKVQGMVYCDTCRIQFMTRISTIMEGATVKLECRNITA 67

Query: 163 WVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPD---LGRNSATVILT 222
               F  +A+T+  G+Y+IPV+ D +D+ C++ LV SP+  C++       + SA V LT
Sbjct: 68  GTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKVSLT 127

Query: 223 NNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYD 255
           +NNG  +++R ANA+GF  + PL  CP +LK+   YD
Sbjct: 128 SNNGEASDIRSANALGFMRKEPLKECPEVLKELDLYD 164

[Close]
BLAST of CmoCh04G008680 vs. Swiss-Prot
Match: PSC13_MAIZE (Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-25
Identity = 61/154 (39.61%), Postives = 99/154 (64.29%), Query Frame = 1 

Query: 104 ILIGVCFVV--AASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKW 163
           +++ +C V+  AA+  P    +++ G VYCDTCR GF TN +  I+GA VRLEC+     
Sbjct: 14  VILCLCVVLSCAAADDPNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRLECKHFGTG 73

Query: 164 VLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNG 223
            L+ +   +T++ G YTI +   H+++ C++VLV+SP   C++    R+ A V+LT N G
Sbjct: 74  KLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAGVLLTRNVG 133

Query: 224 LTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 256
           +++++R AN +G+F   PL +C +LLKQ LD D+
Sbjct: 134 ISDSLRPANPLGYFKDVPLPVCAALLKQ-LDSDD 166

[Close]
BLAST of CmoCh04G008680 vs. Swiss-Prot
Match: PHLB_PHLPR (Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.5e-23
Identity = 55/129 (42.64%), Postives = 77/129 (59.69%), Query Frame = 1 

Query: 123 FIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKWVLKFSKKAITNSEGKYTIPVS 182
           F+V G VYCD CR GFETN S  + GA V ++CR       K   +A T+  G Y I + 
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEID 65

Query: 183 YDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNGL-TNNVRYANAMGFFTQRPLA 242
            DH++E C++VL  SP  TC++ +  R+ A V LT+NNG+    +RYAN + FF + PL 
Sbjct: 66  QDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLK 125

Query: 243 LCPSLLKQY 251
            C  +L+ Y
Sbjct: 126 ECGGILQAY 134

[Close]
BLAST of CmoCh04G008680 vs. Swiss-Prot
Match: LOLB_LOLPR (Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.7e-22
Identity = 53/129 (41.09%), Postives = 77/129 (59.69%), Query Frame = 1 

Query: 123 FIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKWVLKFSKKAITNSEGKYTIPVS 182
           F+V G VYCD CR GFETN S  + GA V ++CR       K   +A T+ +G Y I + 
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVEGATVAVDCRPFDGGESKLKAEATTDKDGWYKIEID 65

Query: 183 YDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNGL-TNNVRYANAMGFFTQRPLA 242
            DH++E C++VL  SP  +C++ +  R+ A V LT+N G+    +RYAN + FF + PL 
Sbjct: 66  QDHQEEICEVVLAKSPDKSCSEIEEFRDRARVPLTSNXGIKQQGIRYANPIAFFRKEPLK 125

Query: 243 LCPSLLKQY 251
            C  +L+ Y
Sbjct: 126 ECGGILQAY 134

[Close]
BLAST of CmoCh04G008680 vs. TrEMBL
Match: A0A0A0KUJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G028420 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.7e-61
Identity = 118/160 (73.75%), Postives = 134/160 (83.75%), Query Frame = 1 

Query: 99  ANLFWILIGVCFVVAASAQPLQKP-FIVNGCVYCDTCRCGFETNASTPISGAIVRLECRD 158
           + LF +LIGVCF+V     P     F+VNGCVYCDTCRCGFETN STPISGA VRLECRD
Sbjct: 4   STLFKLLIGVCFLVLLHGLPASAQLFVVNGCVYCDTCRCGFETNVSTPISGAKVRLECRD 63

Query: 159 RAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILT 218
           RA WVLKF+K+AIT+S+GKY I V  DHKDESCK+VLVSSPH  CN+PD+GRNSATVILT
Sbjct: 64  RATWVLKFTKEAITDSKGKYKINVYEDHKDESCKVVLVSSPHLGCNRPDVGRNSATVILT 123

Query: 219 NNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDESL 258
           NNNGLT+  RYANAMGF  +RPLA CP++LKQYLD+DESL
Sbjct: 124 NNNGLTSIFRYANAMGFLIRRPLAFCPTILKQYLDFDESL 163

[Close]
BLAST of CmoCh04G008680 vs. TrEMBL
Match: A9PHV1_POPTR (Pollen Ole e 1 allergen and extensin family protein OS=Populus trichocarpa GN=POPTR_0005s16600g PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.5e-36
Identity = 77/154 (50.00%), Postives = 105/154 (68.18%), Query Frame = 1 

Query: 104 ILIGVCFVVAA--SAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKW 163
           +L+ +C + A   +A+P + PF+V G VYCDTC  GFET+ +T I+GA VRLEC+DR   
Sbjct: 6   LLLALCVLPALVRAARPARNPFVVQGSVYCDTCLAGFETSKTTNIAGAKVRLECKDRKTQ 65

Query: 164 VLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNG 223
            L +SK+  T+S GKYTI V  DH+D+ C  +LVSSP   C  P  GR+ A VILTN+NG
Sbjct: 66  DLVYSKEGTTDSTGKYTITVDEDHEDQICDCMLVSSPRKDCRSPSAGRDRARVILTNDNG 125

Query: 224 LTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 256
           L +  RYANAMGF   +P++ C  LL+ Y +Y++
Sbjct: 126 LVSTTRYANAMGFMAAQPMSGCTELLRLYQEYED 159

[Close]
BLAST of CmoCh04G008680 vs. TrEMBL
Match: E2LMG1_MONPE (Uncharacterized protein OS=Moniliophthora perniciosa (strain FA553 / isolate CP02) GN=MPER_07958 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.1e-34
Identity = 75/154 (48.70%), Postives = 105/154 (68.18%), Query Frame = 1 

Query: 104 ILIGVCFV---VAASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAK 163
           +L+ +C +   +A +A+P + P  V G VYCDTCR GFET AST I+GA V++EC+DR  
Sbjct: 6   VLLALCCLLPAIAFAARPARNPLTVTGKVYCDTCRAGFETPASTYIAGAKVKVECKDRTS 65

Query: 164 WVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNN 223
             L +S++A T+S G Y + VS DH+D+ C  +L+SSP P C +P  GR+ A VILT  N
Sbjct: 66  MKLLYSQEATTDSTGTYKLFVSEDHQDQLCDAMLLSSPQPNCQKPAAGRDRARVILTRYN 125

Query: 224 GLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYD 255
           G+ ++ RYAN MGF   +PLA C  +L+QY D+D
Sbjct: 126 GIVSDTRYANNMGFEMDQPLAGCTQVLQQYQDFD 159

[Close]
BLAST of CmoCh04G008680 vs. TrEMBL
Match: B9RJG6_RICCO (Pollen-specific protein C13, putative OS=Ricinus communis GN=RCOM_1034130 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.3e-34
Identity = 74/154 (48.05%), Postives = 106/154 (68.83%), Query Frame = 1 

Query: 104 ILIGVCFVVA--ASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKW 163
           +L+ +C + A  A+A+P + PF V G VYCDTCR GFET+ +T ++GA VR+EC+DR   
Sbjct: 6   LLLALCVLPALVAAARPARNPFEVEGRVYCDTCRAGFETSKTTYVAGAKVRVECKDRKTM 65

Query: 164 VLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNG 223
            L +SK+  T+S G Y I V  DH+D+ C  +LVSSP   C +P  GR+ A VILTNNNG
Sbjct: 66  ELVYSKEGTTDSTGTYRIHVDEDHQDQLCDAMLVSSPQHDCMKPSSGRDRARVILTNNNG 125

Query: 224 LTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 256
           + +N RYAN++GF  +  ++ C  LL+QY +Y++
Sbjct: 126 IVSNKRYANSIGFMKEDAMSGCFELLRQYQEYED 159

[Close]
BLAST of CmoCh04G008680 vs. TrEMBL
Match: I3SBU0_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 76/155 (49.03%), Postives = 103/155 (66.45%), Query Frame = 1 

Query: 102 FWILIGVCFVVA--ASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRA 161
           F  L+ +C V A  A+ +P + PFIV GCVYCD CR GFET+A+T I+G  V L CR + 
Sbjct: 5   FAFLLVLCVVPAMVAAIRPAKNPFIVKGCVYCDPCRAGFETSATTRIAGTEVMLLCRQKN 64

Query: 162 KWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNN 221
              + ++K+  TNS+G+YTI VS DH D+ C   L+SSPHPTC +   GR+ A VILT  
Sbjct: 65  SNEVVYTKRGWTNSKGEYTISVSEDHGDQICDAKLISSPHPTCKEATPGRDQARVILTRY 124

Query: 222 NGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYD 255
           NG+ ++ R+ANAMGF ++   A C  +LKQY + D
Sbjct: 125 NGIASDDRFANAMGFMSENVAAGCTQILKQYEELD 159

[Close]
BLAST of CmoCh04G008680 vs. TAIR10
Match: AT4G08685.1 (AT4G08685.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 129.8 bits (325), Expect = 2.4e-30
Identity = 66/154 (42.86%), Postives = 96/154 (62.34%), Query Frame = 1 

Query: 104 ILIGVCFV--VAASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKW 163
           +L+ +CF+  +A +A+P + PF+V G VYCDTC  GFET AST ISGA+VRLEC+DR   
Sbjct: 6   LLVALCFLPALAIAARPNKNPFVVRGRVYCDTCLAGFETPASTYISGAVVRLECKDRRTM 65

Query: 164 VLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNG 223
            L +S +A T+S G Y I V+ DH ++ C  +LV S    C+    G + A V LT  NG
Sbjct: 66  ELTYSHEARTDSTGSYKILVNEDHDEQFCDAMLVRSSQLRCSNVSPGHDRARVTLTRFNG 125

Query: 224 LTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 256
           + ++ R+AN MGF     +  C  ++K Y + ++
Sbjct: 126 IASDDRFANNMGFLRDAAMPGCADIMKLYQETED 159

[Close]
BLAST of CmoCh04G008680 vs. TAIR10
Match: AT5G10130.1 (AT5G10130.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 125.6 bits (314), Expect = 4.5e-29
Identity = 70/156 (44.87%), Postives = 91/156 (58.33%), Query Frame = 1 

Query: 98  VANLFWILIGVC--FVVAASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLEC 157
           +A  F  LI V    V+  +A  +  PF + G VYCDTCR GFET A+  I GA VR+ C
Sbjct: 1   MAKSFVPLIAVLCVLVLPLAAMAVGTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVC 60

Query: 158 RDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVI 217
           +DR     +    A+T  +GKY + V  D +D+ C   LV SP   C + D GR++ATVI
Sbjct: 61  KDRVTLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVI 120

Query: 218 LTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYL 252
           LT +NG  +   YANAMGFF   PL  C +L K+YL
Sbjct: 121 LTRSNGAASTRHYANAMGFFRDEPLRGCAALRKRYL 156

[Close]
BLAST of CmoCh04G008680 vs. TAIR10
Match: AT1G29140.1 (AT1G29140.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 109.0 bits (271), Expect = 4.4e-24
Identity = 60/158 (37.97%), Postives = 90/158 (56.96%), Query Frame = 1 

Query: 101 LFWILIGVCFVV-----AASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLEC 160
           + ++   +CF       AA A    K F + G VYCDTCR  F T  S  + GA V+LEC
Sbjct: 6   IVFLASALCFTTLVHFTAADADDFDK-FHIKGSVYCDTCRVQFITRISKFLEGAKVKLEC 65

Query: 161 RDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTC---NQPDLGRNSA 220
           + R    +  +K+A+T++ G Y + V  DH++E C++VL+ SP P C   N  +  RN+A
Sbjct: 66  KGRENQTVTLTKEAVTDNAGNYQMEVMGDHEEEVCEIVLLQSPDPECGDVNNQEFLRNAA 125

Query: 221 TVILTNNNGL-TNNVRYANAMGFFTQRPLALCPSLLKQ 250
            + LT N+G+ +N  R  N +GF  + PLA CP + K+
Sbjct: 126 RISLTANDGIVSNETRTINPLGFMRKTPLAECPQVFKE 162

[Close]
BLAST of CmoCh04G008680 vs. TAIR10
Match: AT5G45880.1 (AT5G45880.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 107.8 bits (268), Expect = 9.8e-24
Identity = 60/157 (38.22%), Postives = 88/157 (56.05%), Query Frame = 1 

Query: 102 FWILIGVCF-----VVAASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECR 161
           F+++  VC        AA A    + F + G VYCDTCR  F T  S  + GA V+LECR
Sbjct: 10  FFVVSAVCLSSLAGFAAADADDFDR-FQIQGSVYCDTCRVQFVTRLSKFLEGAKVKLECR 69

Query: 162 DRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLG---RNSAT 221
            R    +  +K+A+T+  G Y + V+ DH++E C++VLV SP   C+        RN+A 
Sbjct: 70  SRTNGTITLTKEAVTDKTGSYKMEVTGDHEEEVCELVLVQSPDSGCSDVSTEAYLRNAAK 129

Query: 222 VILTNNNGL-TNNVRYANAMGFFTQRPLALCPSLLKQ 250
           + LT N+G+ ++  R  N +GF  Q PLA CP+  K+
Sbjct: 130 ISLTANDGIVSHETRIVNPLGFMVQTPLADCPAAFKE 165

[Close]
BLAST of CmoCh04G008680 vs. TAIR10
Match: AT4G18596.1 (AT4G18596.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 104.8 bits (260), Expect = 8.3e-23
Identity = 61/163 (37.42%), Postives = 89/163 (54.60%), Query Frame = 1 

Query: 96  AAVANLFWILIGVCF-----VVAASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAI 155
           A+ A  F+ +  VC      V  A A    + F + G VYCDTCR  F T  S  + GA 
Sbjct: 2   ASKAIFFFFVSAVCLSSLAGVAIADADDFDR-FQIQGSVYCDTCRVQFVTRLSKFLEGAK 61

Query: 156 VRLECRDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLG-- 215
           V+LECR R    +  +K+A+T+  G Y + V+ DH++E C++VLV SP   C+       
Sbjct: 62  VKLECRSRTNGTVTLTKEAVTDKTGSYRMEVTGDHEEEVCELVLVESPDSGCSDVSKEAY 121

Query: 216 -RNSATVILTNNNGL-TNNVRYANAMGFFTQRPLALCPSLLKQ 250
            RN+A + LT N+G+ ++  R  N +GF  Q P A CP+  K+
Sbjct: 122 LRNAAKISLTANDGIVSHETRIVNPLGFMVQTPSAECPAAFKE 163

[Close]
BLAST of CmoCh04G008680 vs. NCBI nr
Match: gi|659107680|ref|XP_008453801.1| (PREDICTED: major pollen allergen Lol p 11-like [Cucumis melo])

HSP 1 Score: 245.7 bits (626), Expect = 8.6e-62
Identity = 118/162 (72.84%), Postives = 135/162 (83.33%), Query Frame = 1 

Query: 97  AVANLFWILIGVCFVVAASAQPLQKP-FIVNGCVYCDTCRCGFETNASTPISGAIVRLEC 156
           A +NLF +LIGVCF+V     P     F+VNGCVYCDTCRCGFETN STP+SGA VRLEC
Sbjct: 2   ATSNLFKLLIGVCFLVLLHGLPASAQLFVVNGCVYCDTCRCGFETNVSTPVSGAKVRLEC 61

Query: 157 RDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVI 216
           RDRA WVLKF+K+A TNS+GKY I V  DHKDESCK+VLVSSPH  C++PD+GRNSATVI
Sbjct: 62  RDRATWVLKFTKEATTNSKGKYKIDVYEDHKDESCKVVLVSSPHRGCDRPDIGRNSATVI 121

Query: 217 LTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDESL 258
           LTNNNGLT+  RYANAMGF  +RPLA CP++LKQYLD+DESL
Sbjct: 122 LTNNNGLTSISRYANAMGFLIRRPLAFCPTILKQYLDFDESL 163

[Close]
BLAST of CmoCh04G008680 vs. NCBI nr
Match: gi|778690432|ref|XP_011653120.1| (PREDICTED: major pollen allergen Lol p 11-like [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 2.5e-61
Identity = 118/160 (73.75%), Postives = 134/160 (83.75%), Query Frame = 1 

Query: 99  ANLFWILIGVCFVVAASAQPLQKP-FIVNGCVYCDTCRCGFETNASTPISGAIVRLECRD 158
           + LF +LIGVCF+V     P     F+VNGCVYCDTCRCGFETN STPISGA VRLECRD
Sbjct: 4   STLFKLLIGVCFLVLLHGLPASAQLFVVNGCVYCDTCRCGFETNVSTPISGAKVRLECRD 63

Query: 159 RAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILT 218
           RA WVLKF+K+AIT+S+GKY I V  DHKDESCK+VLVSSPH  CN+PD+GRNSATVILT
Sbjct: 64  RATWVLKFTKEAITDSKGKYKINVYEDHKDESCKVVLVSSPHLGCNRPDVGRNSATVILT 123

Query: 219 NNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDESL 258
           NNNGLT+  RYANAMGF  +RPLA CP++LKQYLD+DESL
Sbjct: 124 NNNGLTSIFRYANAMGFLIRRPLAFCPTILKQYLDFDESL 163

[Close]
BLAST of CmoCh04G008680 vs. NCBI nr
Match: gi|743924089|ref|XP_011006159.1| (PREDICTED: pollen-specific protein C13-like [Populus euphratica])

HSP 1 Score: 162.2 bits (409), Expect = 1.2e-36
Identity = 78/154 (50.65%), Postives = 103/154 (66.88%), Query Frame = 1 

Query: 104 ILIGVCFVVAA--SAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKW 163
           +L+ +C + A   +A+P + PF+V G VYCDTC  GFET+ +T I+GA VRLEC+DR   
Sbjct: 6   LLLALCVLPALVRAARPARNPFVVQGSVYCDTCLAGFETSKTTNIAGAKVRLECKDRKTQ 65

Query: 164 VLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNG 223
            L +SK+  T+S GKYTI V  DHKD+ C  +LVSSP   C  P  GR+ A VILTNNNG
Sbjct: 66  DLVYSKEGTTDSTGKYTITVDEDHKDQICDCMLVSSPRKDCRSPSAGRDRARVILTNNNG 125

Query: 224 LTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 256
           L +  RY NAMGF    P++ C  LL+ Y +Y++
Sbjct: 126 LVSTTRYVNAMGFMAAHPMSGCTELLRLYQEYED 159

[Close]
BLAST of CmoCh04G008680 vs. NCBI nr
Match: gi|224084708|ref|XP_002307393.1| (pollen Ole e 1 allergen and extensin family protein [Populus trichocarpa])

HSP 1 Score: 160.6 bits (405), Expect = 3.6e-36
Identity = 77/154 (50.00%), Postives = 105/154 (68.18%), Query Frame = 1 

Query: 104 ILIGVCFVVAA--SAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECRDRAKW 163
           +L+ +C + A   +A+P + PF+V G VYCDTC  GFET+ +T I+GA VRLEC+DR   
Sbjct: 6   LLLALCVLPALVRAARPARNPFVVQGSVYCDTCLAGFETSKTTNIAGAKVRLECKDRKTQ 65

Query: 164 VLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVILTNNNG 223
            L +SK+  T+S GKYTI V  DH+D+ C  +LVSSP   C  P  GR+ A VILTN+NG
Sbjct: 66  DLVYSKEGTTDSTGKYTITVDEDHEDQICDCMLVSSPRKDCRSPSAGRDRARVILTNDNG 125

Query: 224 LTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 256
           L +  RYANAMGF   +P++ C  LL+ Y +Y++
Sbjct: 126 LVSTTRYANAMGFMAAQPMSGCTELLRLYQEYED 159

[Close]
BLAST of CmoCh04G008680 vs. NCBI nr
Match: gi|747099105|ref|XP_011097595.1| (PREDICTED: major pollen allergen Lol p 11-like [Sesamum indicum])

HSP 1 Score: 155.6 bits (392), Expect = 1.2e-34
Identity = 73/159 (45.91%), Postives = 106/159 (66.67%), Query Frame = 1 

Query: 98  VANLFWILIGVCFVVA-ASAQPLQKPFIVNGCVYCDTCRCGFETNASTPISGAIVRLECR 157
           +A    +L  +C V +  +A+    P ++ GCVYCDTCRCG+ET+A+  ++GA+VR+ECR
Sbjct: 1   MAKFLLVLFALCVVPSIVTARFANDPLLLTGCVYCDTCRCGYETSATKYLAGAVVRVECR 60

Query: 158 DRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSATVIL 217
            R    L ++K+A+T+S G Y I V  D  D+ C  VLV SP P C+ P+ GR+ A VIL
Sbjct: 61  KRDSSELTYTKEAVTDSTGHYKILVETDRGDDYCDSVLVKSPDPECSIPNAGRDRARVIL 120

Query: 218 TNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 256
           T NNG+ +N R+ANA+GF    PLA CP +L+QY + ++
Sbjct: 121 TRNNGMNSNARFANALGFLKNTPLASCPQVLQQYQEAED 159

The following BLAST results are available for this feature:
BLAST of CmoCh04G008680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DFC_ARATH8.1e-2844.87Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana GN=DFC PE=2 SV=1[more]
CHE1_CHEAL1.3e-2540.76Pollen allergen Che a 1 OS=Chenopodium album PE=1 SV=1[more]
PSC13_MAIZE1.3e-2539.61Pollen-specific protein C13 OS=Zea mays GN=MGS1 PE=2 SV=1[more]
PHLB_PHLPR3.5e-2342.64Pollen allergen Phl p 11 OS=Phleum pratense PE=1 SV=1[more]
LOLB_LOLPR1.7e-2241.09Major pollen allergen Lol p 11 OS=Lolium perenne PE=1 SV=1[more]
BLAST of CmoCh04G008680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUJ2_CUCSA1.7e-6173.75Uncharacterized protein OS=Cucumis sativus GN=Csa_4G028420 PE=4 SV=1[more]
A9PHV1_POPTR2.5e-3650.00Pollen Ole e 1 allergen and extensin family protein OS=Populus trichocarpa GN=PO... [more]
E2LMG1_MONPE3.1e-3448.70Uncharacterized protein OS=Moniliophthora perniciosa (strain FA553 / isolate CP0... [more]
B9RJG6_RICCO5.3e-3448.05Pollen-specific protein C13, putative OS=Ricinus communis GN=RCOM_1034130 PE=4 S... [more]
I3SBU0_LOTJA1.2e-3349.03Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
BLAST of CmoCh04G008680 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G08685.12.4e-3042.86 Pollen Ole e 1 allergen and extensin family protein[more]
AT5G10130.14.5e-2944.87 Pollen Ole e 1 allergen and extensin family protein[more]
AT1G29140.14.4e-2437.97 Pollen Ole e 1 allergen and extensin family protein[more]
AT5G45880.19.8e-2438.22 Pollen Ole e 1 allergen and extensin family protein[more]
AT4G18596.18.3e-2337.42 Pollen Ole e 1 allergen and extensin family protein[more]
BLAST of CmoCh04G008680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659107680|ref|XP_008453801.1|8.6e-6272.84PREDICTED: major pollen allergen Lol p 11-like [Cucumis melo][more]
gi|778690432|ref|XP_011653120.1|2.5e-6173.75PREDICTED: major pollen allergen Lol p 11-like [Cucumis sativus][more]
gi|743924089|ref|XP_011006159.1|1.2e-3650.65PREDICTED: pollen-specific protein C13-like [Populus euphratica][more]
gi|224084708|ref|XP_002307393.1|3.6e-3650.00pollen Ole e 1 allergen and extensin family protein [Populus trichocarpa][more]
gi|747099105|ref|XP_011097595.1|1.2e-3445.91PREDICTED: major pollen allergen Lol p 11-like [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G008680.1CmoCh04G008680.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31614FAMILY NOT NAMEDcoord: 89..255
score: 3.3
NoneNo IPR availablePANTHERPTHR31614:SF5ALLERGEN-LIKE PROTEIN BRSN20-RELATEDcoord: 89..255
score: 3.3
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_Icoord: 125..207
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G008680Csa4G028420Cucumber (Chinese Long) v2cmocuB704
CmoCh04G008680CSPI04G04600Wild cucumber (PI 183967)cmocpiB714
CmoCh04G008680Cp4.1LG01g09400Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G008680CsaV3_UNG137040Cucumber (Chinese Long) v3cmocucB0843
CmoCh04G008680CsaV3_UNG146130Cucumber (Chinese Long) v3cmocucB0844
CmoCh04G008680Carg14207Silver-seed gourdcarcmoB1259
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G008680Watermelon (97103) v2cmowmbB682
CmoCh04G008680Watermelon (97103) v2cmowmbB748
CmoCh04G008680Wax gourdcmowgoB0843
CmoCh04G008680Cucurbita moschata (Rifu)cmocmoB285
CmoCh04G008680Cucurbita moschata (Rifu)cmocmoB451
CmoCh04G008680Cucumber (Gy14) v1cgycmoB0001
CmoCh04G008680Cucumber (Gy14) v1cgycmoB0229
CmoCh04G008680Cucurbita maxima (Rimu)cmacmoB337
CmoCh04G008680Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G008680Wild cucumber (PI 183967)cmocpiB715
CmoCh04G008680Wild cucumber (PI 183967)cmocpiB775
CmoCh04G008680Cucumber (Chinese Long) v2cmocuB705
CmoCh04G008680Cucumber (Chinese Long) v2cmocuB768
CmoCh04G008680Melon (DHL92) v3.5.1cmomeB686
CmoCh04G008680Melon (DHL92) v3.5.1cmomeB702
CmoCh04G008680Watermelon (Charleston Gray)cmowcgB641
CmoCh04G008680Watermelon (Charleston Gray)cmowcgB670
CmoCh04G008680Watermelon (97103) v1cmowmB671
CmoCh04G008680Watermelon (97103) v1cmowmB711
CmoCh04G008680Cucurbita pepo (Zucchini)cmocpeB655
CmoCh04G008680Cucurbita pepo (Zucchini)cmocpeB667
CmoCh04G008680Bottle gourd (USVL1VR-Ls)cmolsiB628
CmoCh04G008680Bottle gourd (USVL1VR-Ls)cmolsiB692
CmoCh04G008680Melon (DHL92) v3.6.1cmomedB779
CmoCh04G008680Cucumber (Gy14) v2cgybcmoB521
CmoCh04G008680Cucumber (Gy14) v2cgybcmoB824
CmoCh04G008680Melon (DHL92) v3.6.1cmomedB801
CmoCh04G008680Silver-seed gourdcarcmoB1371
CmoCh04G008680Cucumber (Chinese Long) v3cmocucB0833
CmoCh04G008680Cucumber (Chinese Long) v3cmocucB0845
CmoCh04G008680Cucumber (Chinese Long) v3cmocucB0909