Cp4.1LG01g09020 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g09020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Homeobox-leucine zipper protein family
Location	Cp4.1LG01 : 4505674 .. 4507837 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAACACTCAAAAGTGGTAGCAATTGTTAAATATAATGTGTAGCACAAACAATAAAAGAAATAAAGAAAGAAAGAAAGAAAGAAAGAATGATCCTTTCTTGATGTGTTCCCCACTGCCATGTGAACTCAGTGATTCTAGCAGGAAAGGGAAAGTTGTGGGGATTTTCTTTTCTTTGCTTTTCTTTTCTTTTCTTTTTCTTTGCTTTTCTTTTCTTTTCTTTTCTTTGCCTCAATAATGTGAAGATAATAACTAAGTGGGGCTTCCAAAGGTCAACCTATGTATAGAGATAGAACGGACTTTTAATTTCATAACTCTTTTTCTTTTTTTTTTTTCTTTTACTTTGAGATTCTTTTGTCTTCTGAGTTCTTTAATTTCTTCTGGATTAATAATCATTCCCACCCACCCACACAAACACAAACACAAACACACCCATCTCTCTCCTTTTTCCTCTTCTTAAACCCTTCATTTTGGTTTGTTGTTCTTCACAACTTCCATCTTTTTCCACACAAATCCTTTAACTCAACTCAACTCCAGATGGGTTTGGATGATGTTTCTCAAACAAGCTTGGTTTTGGGGTTGGGGATCTCAGAAGCTGCTTCTCCAATTCTTAACAACTTCAAGAACAACAAGAAGAAGAAGAACAACAAAGAGAATCCTACTTCACTTGAGTTTGAGCCTTGTGCTTTGACTTTGGGATTTTCGGGCGATGTTGATCCTCCTCCTCATCATCATCCTCATCATCATCATCATTTGTATCGCCAAGCTTCCCCTCATAGCAGCGCTGTTTGTTCTTCCTTCTCCGGGGGCGGTGGCGGTGGGATTAAAAGGGAGAGAGACCTCAGCAGTGAAGAAGTTGAATTGGAGAGGGTTTGTTGTAGAGTTAGTGATGAAGATGAAGATGGTTGTAATACTAGGAAGAAGCTTAGGCTTTCTAAACAACAATCCGCGCTATTGGAAGAGAGTTTCAAACAAAATAGCACTCTCAACCCCGTAAGTTTCTCTATATACATACCACTACTAAATCAATTATATAAATCTTCTATTCATATTCTCTCATTCTTTTCATCAGAAACAAAAGCAAACCTTAGCCAGACACCTAAACCTACGCCCAAGACAAGTGGAAGTATGGTTTCAAAATAGGAGAGCTCGGTGAGTGAGTTCATCCCAATTTCTTCTAGTACTTCTCTACATCATCCATTACATCTCTCAACCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCTGTTTTTTCAGAACAAAAATGAAACAAACAGAAGTAGACTGTGAGTTCTTGAAGAAATGTTGCGAGACCTTGACAAACGAAAATAGAAGACTACAGAAGGAGCTTCAAGAATTGAAGGCACTAAAGCTCGCACACCCGCTGTACATGCACATGCCAGCAGCAACGTTAACCATGTGCCCATCCTGCGAAAGGGTGGGTGGCGTTGGCGTTGGCGTTGGCGATGGCGCTTCCAAACCCAAATTTTCAATGGCTCCCAAGCCCCACTTTTACAACCCCTTCTCCAATCCTTCAGCCGCATGTTAGAAAATTAATGTACACCATTTACAAGCTACACAAAATAACACTATACTCATATATTTTTCTCCTTCTTCTTCTTCAAAACGCCATAGCTAGCTTAGAAATTGGAGAAATTTAGTGTAACTATTAGCTACCCTTGTACAAGCTTACCCTTAAGATCAAATTATCATCAGTTGTAAAGATTTTAAACTCTATCTAGAAATTAATCCAGGATTGGTGGGTATATAATGTAATTTTTTTTCATCGATTTTTAGAATGATAATTGATGTCTTATTTACTTAATTATGTATGATCGACCGACCATCCGACCGACGATCCAATGACGCAAGATAGGATGGTGTGTTGGATTGGGAAAAATTATTGGGTGGTGTTGGTGTAAGGGGCTATCTATCTATCTCATTGGCTGCCTACGTGTTACGCAAGGGATGACACTGATATGACTTTTGCTATTTTATTAGTGCGTTTTGGCTTCATTGGTCAATATGATACAATGATAATAATATTACATTTCTTTTTTCTTTTTTTCTTGTTTTATATCATGGAATCTACTTTTCTTTTTCTCATTTTCTTCCTTTTTGTTTCTACACAAACATTTTTATTTAAATACTTTTATATGAATTCAA

mRNA sequence

GCAACACTCAAAAGTGGTAGCAATTGTTAAATATAATGTGTAGCACAAACAATAAAAGAAATAAAGAAAGAAAGAAAGAAAGAAAGAATGATCCTTTCTTGATGTGTTCCCCACTGCCATGTGAACTCAGTGATTCTAGCAGGAAAGGGAAAGTTGTGGGGATTTTCTTTTCTTTGCTTTTCTTTTCTTTTCTTTTTCTTTGCTTTTCTTTTCTTTTCTTTTCTTTGCCTCAATAATGTGAAGATAATAACTAAGTGGGGCTTCCAAAGGTCAACCTATGTATAGAGATAGAACGGACTTTTAATTTCATAACTCTTTTTCTTTTTTTTTTTTCTTTTACTTTGAGATTCTTTTGTCTTCTGAGTTCTTTAATTTCTTCTGGATTAATAATCATTCCCACCCACCCACACAAACACAAACACAAACACACCCATCTCTCTCCTTTTTCCTCTTCTTAAACCCTTCATTTTGGTTTGTTGTTCTTCACAACTTCCATCTTTTTCCACACAAATCCTTTAACTCAACTCAACTCCAGATGGGTTTGGATGATGTTTCTCAAACAAGCTTGGTTTTGGGGTTGGGGATCTCAGAAGCTGCTTCTCCAATTCTTAACAACTTCAAGAACAACAAGAAGAAGAAGAACAACAAAGAGAATCCTACTTCACTTGAGTTTGAGCCTTGTGCTTTGACTTTGGGATTTTCGGGCGATGTTGATCCTCCTCCTCATCATCATCCTCATCATCATCATCATTTGTATCGCCAAGCTTCCCCTCATAGCAGCGCTGTTTGTTCTTCCTTCTCCGGGGGCGGTGGCGGTGGGATTAAAAGGGAGAGAGACCTCAGCAGTGAAGAAGTTGAATTGGAGAGGGTTTGTTGTAGAGTTAGTGATGAAGATGAAGATGGTTGTAATACTAGGAAGAAGCTTAGGCTTTCTAAACAACAATCCGCGCTATTGGAAGAGAGTTTCAAACAAAATAGCACTCTCAACCCCAAACAAAAGCAAACCTTAGCCAGACACCTAAACCTACGCCCAAGACAAGTGGAAGTATGGTTTCAAAATAGGAGAGCTCGAACAAAAATGAAACAAACAGAAGTAGACTGTGAGTTCTTGAAGAAATGTTGCGAGACCTTGACAAACGAAAATAGAAGACTACAGAAGGAGCTTCAAGAATTGAAGGCACTAAAGCTCGCACACCCGCTGTACATGCACATGCCAGCAGCAACGTTAACCATGTGCCCATCCTGCGAAAGGGTGGGTGGCGTTGGCGTTGGCGTTGGCGATGGCGCTTCCAAACCCAAATTTTCAATGGCTCCCAAGCCCCACTTTTACAACCCCTTCTCCAATCCTTCAGCCGCATGTTAGAAAATTAATGTACACCATTTACAAGCTACACAAAATAACACTATACTCATATATTTTTCTCCTTCTTCTTCTTCAAAACGCCATAGCTAGCTTAGAAATTGGAGAAATTTAGTGTAACTATTAGCTACCCTTGTACAAGCTTACCCTTAAGATCAAATTATCATCAGTTGTAAAGATTTTAAACTCTATCTAGAAATTAATCCAGGATTGGTGGGTATATAATGTAATTTTTTTTCATCGATTTTTAGAATGATAATTGATGTCTTATTTACTTAATTATGTATGATCGACCGACCATCCGACCGACGATCCAATGACGCAAGATAGGATGGTGTGTTGGATTGGGAAAAATTATTGGGTGGTGTTGGTGTAAGGGGCTATCTATCTATCTCATTGGCTGCCTACGTGTTACGCAAGGGATGACACTGATATGACTTTTGCTATTTTATTAGTGCGTTTTGGCTTCATTGGTCAATATGATACAATGATAATAATATTACATTTCTTTTTTCTTTTTTTCTTGTTTTATATCATGGAATCTACTTTTCTTTTTCTCATTTTCTTCCTTTTTGTTTCTACACAAACATTTTTATTTAAATACTTTTATATGAATTCAA

Coding sequence (CDS)

ATGGGTTTGGATGATGTTTCTCAAACAAGCTTGGTTTTGGGGTTGGGGATCTCAGAAGCTGCTTCTCCAATTCTTAACAACTTCAAGAACAACAAGAAGAAGAAGAACAACAAAGAGAATCCTACTTCACTTGAGTTTGAGCCTTGTGCTTTGACTTTGGGATTTTCGGGCGATGTTGATCCTCCTCCTCATCATCATCCTCATCATCATCATCATTTGTATCGCCAAGCTTCCCCTCATAGCAGCGCTGTTTGTTCTTCCTTCTCCGGGGGCGGTGGCGGTGGGATTAAAAGGGAGAGAGACCTCAGCAGTGAAGAAGTTGAATTGGAGAGGGTTTGTTGTAGAGTTAGTGATGAAGATGAAGATGGTTGTAATACTAGGAAGAAGCTTAGGCTTTCTAAACAACAATCCGCGCTATTGGAAGAGAGTTTCAAACAAAATAGCACTCTCAACCCCAAACAAAAGCAAACCTTAGCCAGACACCTAAACCTACGCCCAAGACAAGTGGAAGTATGGTTTCAAAATAGGAGAGCTCGAACAAAAATGAAACAAACAGAAGTAGACTGTGAGTTCTTGAAGAAATGTTGCGAGACCTTGACAAACGAAAATAGAAGACTACAGAAGGAGCTTCAAGAATTGAAGGCACTAAAGCTCGCACACCCGCTGTACATGCACATGCCAGCAGCAACGTTAACCATGTGCCCATCCTGCGAAAGGGTGGGTGGCGTTGGCGTTGGCGTTGGCGATGGCGCTTCCAAACCCAAATTTTCAATGGCTCCCAAGCCCCACTTTTACAACCCCTTCTCCAATCCTTCAGCCGCATGTTAG

Protein sequence

MGLDDVSQTSLVLGLGISEAASPILNNFKNNKKKKNNKENPTSLEFEPCALTLGFSGDVDPPPHHHPHHHHHLYRQASPHSSAVCSSFSGGGGGGIKRERDLSSEEVELERVCCRVSDEDEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHPLYMHMPAATLTMCPSCERVGGVGVGVGDGASKPKFSMAPKPHFYNPFSNPSAAC

Homology

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BLAST of Cp4.1LG01g09020 vs. Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.2e-75
Identity = 172/289 (59.52%), Postives = 203/289 (70.24%), Query Frame = 1


Query: 1   MGLDDVSQTSLVLGLGISEAASPILNNFKNNKKKKNNKENPTSLEFEPCALTLGFSGDVD 60
           MGLDD   T LVLGLG+S    P  NN+ +  KK ++  +   +  +P +LTL  SG+  
Sbjct: 1   MGLDDSCNTGLVLGLGLS----PTPNNYNHAIKKSSSTVDHRFIRLDP-SLTLSLSGE-S 60

Query: 61  PPPHHHPHHHHHLYRQASPHSSAVCSSFSGGGGGGIKRERDLS-------SEEVELERVC 120
                       + RQ S HS    SSFS G    +KRER++S       +EE     VC
Sbjct: 61  YKIKTGAGAGDQICRQTSSHSGI--SSFSSGR---VKREREISGGDGEEEAEETTERVVC 120

Query: 121 CRVSDE--DEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEV 180
            RVSD+  DE+G + RKKLRL+KQQSALLE++FK +STLNPKQKQ LAR LNLRPRQVEV
Sbjct: 121 SRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEV 180

Query: 181 WFQNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHPLYMHMPAATL 240
           WFQNRRARTK+KQTEVDCEFLKKCCETLT+ENRRLQKELQ+LKALKL+ P YMHMPAATL
Sbjct: 181 WFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMHMPAATL 240

Query: 241 TMCPSCERVGGVGVG-----VGDGASKPKFSMAPKPHFYNPFSNPSAAC 276
           TMCPSCER+GG GVG     V +  +K  FS+  KP FYNPF+NPSAAC
Sbjct: 241 TMCPSCERLGGGGVGGDTTAVDEETAKGAFSIVTKPRFYNPFTNPSAAC 278

[Close]

BLAST of Cp4.1LG01g09020 vs. Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2)

HSP 1 Score: 269.6 bits (688), Expect = 3.7e-71
Identity = 171/292 (58.56%), Postives = 194/292 (66.44%), Query Frame = 1


Query: 1   MGLDDVSQTSLVLGLGISEAASPILNNFKNNKKKKNNKENPTSLEFEPCALTLGFSGDVD 60
           MG DD   T LVLGLG     SPI NN+ +  ++ +        + EP +LTL  SGD  
Sbjct: 1   MGFDDTCNTGLVLGLG----PSPIPNNYNSTIRQSS------VYKLEP-SLTLCLSGD-- 60

Query: 61  PPPHHHPHHHHHLYRQASPHSSAVCSSFSGGGGGGIKRERDLSSEEVELERVCCRV-SD- 120
            P          L RQ S HS    SSFS G    +KRERD   E  E E +  RV SD 
Sbjct: 61  -PSVTVVTGADQLCRQTSSHSGV--SSFSSGRV--VKRERDGGEESPEEEEMTERVISDY 120

Query: 121 -EDEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNRR 180
            EDE+G + RKKLRL+KQQSALLEESFK +STLNPKQKQ LAR LNLRPRQVEVWFQNRR
Sbjct: 121 HEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRR 180

Query: 181 ARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHPLYMHMPAATLTMCPSC 240
           ARTK+KQTEVDCEFLKKCCETL +EN RLQKE+QELK LKL  P YMHMPA+TLT CPSC
Sbjct: 181 ARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCPSC 240

Query: 241 ERVGGVGVGVGDG--------------ASKPKFSMAPKPHFYNPFSNPSAAC 276
           ER+GG G G G G               +K  FS++ KPHF+NPF+NPSAAC
Sbjct: 241 ERIGGGGGGNGGGGGGSGATAVIVDGSTAKGAFSISSKPHFFNPFTNPSAAC 274

[Close]

BLAST of Cp4.1LG01g09020 vs. Swiss-Prot
Match: HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.7e-52
Identity = 114/167 (68.26%), Postives = 130/167 (77.84%), Query Frame = 1


Query: 77  ASPHSSA---VCSSFSGGGGGGIKRERDLSSEEVELERVCCRVSDEDEDGCNTRKKLRLS 136
           +SP++SA       FSG G GG     D +      +R C R SDED DG + RKKLRLS
Sbjct: 41  SSPNNSAGSFPMDDFSGHGLGG----NDAAPGGGGGDRSCSRASDED-DGGSARKKLRLS 100

Query: 137 KQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNRRARTKMKQTEVDCEFLK 196
           K+QSA LEESFK++STLNPKQK  LA+ LNLRPRQVEVWFQNRRARTK+KQTEVDCE+LK
Sbjct: 101 KEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLK 160

Query: 197 KCCETLTNENRRLQKELQELKALKLAHPLYMHMPAATLTMCPSCERV 241
           +CCETLT ENRRLQKEL EL+ALK  HP YMH+PA TL+MCPSCERV
Sbjct: 161 RCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERV 202

[Close]

BLAST of Cp4.1LG01g09020 vs. Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.7e-52
Identity = 114/167 (68.26%), Postives = 130/167 (77.84%), Query Frame = 1


Query: 77  ASPHSSA---VCSSFSGGGGGGIKRERDLSSEEVELERVCCRVSDEDEDGCNTRKKLRLS 136
           +SP++SA       FSG G GG     D +      +R C R SDED DG + RKKLRLS
Sbjct: 128 SSPNNSAGSFPMDDFSGHGLGG----NDAAPGGGGGDRSCSRASDED-DGGSARKKLRLS 187

Query: 137 KQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNRRARTKMKQTEVDCEFLK 196
           K+QSA LEESFK++STLNPKQK  LA+ LNLRPRQVEVWFQNRRARTK+KQTEVDCE+LK
Sbjct: 188 KEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLK 247

Query: 197 KCCETLTNENRRLQKELQELKALKLAHPLYMHMPAATLTMCPSCERV 241
           +CCETLT ENRRLQKEL EL+ALK  HP YMH+PA TL+MCPSCERV
Sbjct: 248 RCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERV 289

[Close]

BLAST of Cp4.1LG01g09020 vs. Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-51
Identity = 124/219 (56.62%), Postives = 148/219 (67.58%), Query Frame = 1


Query: 79  PHSSAVCSSFSGGGGGGIKRERDLSSEEVELERVCCRVS--DEDEDGCNTRKKLRLSKQQ 138
           P  S    S        +KRER   +EE + ERV    +  D+D+DG +TRKKLRL+K+Q
Sbjct: 80  PAHSVSSLSVGAAAAAAVKRER---AEEADGERVSSTAAGRDDDDDG-STRKKLRLTKEQ 139

Query: 139 SALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCC 198
           SALLE+ F+++STLNPKQK  LA+ LNLRPRQVEVWFQNRRARTK+KQTEVDCEFLK+CC
Sbjct: 140 SALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCC 199

Query: 199 ETLTNENRRLQKELQELKALKLA----------------HPLYMHMPAATLTMCPSCERV 258
           ETLT ENRRLQ+ELQEL+ALK A                 P YM +PAATLT+CPSCERV
Sbjct: 200 ETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERV 259

Query: 259 GG----VGVGVGDGASKPKFSMAPKPHFYNPFSNPSAAC 276
           GG      V   DG +K         HF+NPF++ SAAC
Sbjct: 260 GGPASAAKVVAADG-TKAGPGRTTTHHFFNPFTH-SAAC 292

[Close]

BLAST of Cp4.1LG01g09020 vs. TrEMBL
Match: A0A0A0LBR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G510960 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 8.8e-96
Identity = 206/282 (73.05%), Postives = 222/282 (78.72%), Query Frame = 1


Query: 1   MGLDDVSQTSLVLGLGISEAASPILNNFKNNKKKKNNKENPTSLEFEPCALTLGFSGDVD 60
           MG DD S+T LVLGLG+SE A    ++ +   KKK    + +SL+FEPC LTLGFSG   
Sbjct: 65  MGFDDFSKTGLVLGLGLSELA----DDQRTTLKKKPAPCSSSSLDFEPCVLTLGFSGG-G 124

Query: 61  PPPHHHPHHH---HHLYRQASPHSSAVCSSFSGGGGGGIKRERDLSSEEVELERVCCRVS 120
              H     H   HHLYRQASPHSSAVCSSFSG     +KRERDLSSEEVELER C RVS
Sbjct: 125 GDTHRKVIDHVGPHHLYRQASPHSSAVCSSFSGK----VKRERDLSSEEVELERACWRVS 184

Query: 121 DEDEDGCN-TRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNR 180
           DED+D CN TRKKLRLSKQQSALLEESFKQNSTLNPKQKQ LAR LNL PRQVEVWFQNR
Sbjct: 185 DEDDDVCNNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQGLARQLNLLPRQVEVWFQNR 244

Query: 181 RARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHPLYMHMPAATLTMCPS 240
           RARTK+KQTEVDCE LKKCCETLT+ENRRLQKE+QELKA+KLA P+YM M  ATLT+CPS
Sbjct: 245 RARTKVKQTEVDCELLKKCCETLTDENRRLQKEVQELKAIKLAKPVYMQMSGATLTICPS 304

Query: 241 CERVG-GVGVGVGDGAS--KPKFSMAPKPHFYNPFSNPSAAC 276
           CERVG G   GV DG S  KPKFSM P P FYNPFSNPSAAC
Sbjct: 305 CERVGTGGHGGVADGNSNPKPKFSMPPNPFFYNPFSNPSAAC 337

[Close]

BLAST of Cp4.1LG01g09020 vs. TrEMBL
Match: A0A061DHW3_THECC (Homeodomain-leucine zipper protein HD4 OS=Theobroma cacao GN=TCM_000867 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 9.4e-90
Identity = 200/294 (68.03%), Postives = 218/294 (74.15%), Query Frame = 1


Query: 1   MGLDDVSQTSLVLGLGISEAA-SPILNNFKNNKKKKNNKENPTSL---EFEPCALTLGFS 60
           MGLDD   T LVLGLG S    +P   N +  KK    K  PT++    FEP +LTLG S
Sbjct: 1   MGLDDACNTGLVLGLGFSSTLETPSKANNQTPKKSSCLKFEPTAMAAASFEP-SLTLGLS 60

Query: 61  G------------DVDPPPHHH---PHHHHHLYRQASPHSSAVCSSFSGGGGGGIKRERD 120
           G            DV+   +HH   P     LYRQASPHS+   SSFS G    +KRERD
Sbjct: 61  GESYQVVTASKKIDVNKGGYHHHEEPAAAGDLYRQASPHSAV--SSFSSGR---VKRERD 120

Query: 121 LSSEEVELERVCCRVSDEDEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARH 180
           LSSEEVE+E+   RVSDEDEDG N RKKLRL+K QSALLEESFKQ+STLNPKQKQ LAR 
Sbjct: 121 LSSEEVEVEKNSSRVSDEDEDGVNARKKLRLTKDQSALLEESFKQHSTLNPKQKQALARQ 180

Query: 181 LNLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHP 240
           L+LRPRQVEVWFQNRRARTK+KQTEVDCEFLKKCCETLT+ENRRLQKELQELKALKLA P
Sbjct: 181 LSLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELKALKLAQP 240

Query: 241 LYMHMPAATLTMCPSCERVGGVGVGVGDGASKPKFSMAPKPHFYNPFSNPSAAC 276
            YMHMPAATLTMCPSCER+G    GVGDG SK  FSMA KPHFYNPF+NPSAAC
Sbjct: 241 FYMHMPAATLTMCPSCERIG----GVGDGNSKSPFSMASKPHFYNPFTNPSAAC 284

[Close]

BLAST of Cp4.1LG01g09020 vs. TrEMBL
Match: M5WC80_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009614mg PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 6.8e-88
Identity = 196/295 (66.44%), Postives = 219/295 (74.24%), Query Frame = 1


Query: 1   MGLDD-VSQTSLVLGLGISEAAS------PILNNFKNNKKKKNNKENPTSLEFEPCALTL 60
           MG DD    T LVLGLG++ ++       P  +N      K +    PTS  FEP +LTL
Sbjct: 1   MGFDDHPCNTGLVLGLGLTTSSPQESTSPPKAHNPSRFANKPSPNSAPTSATFEP-SLTL 60

Query: 61  GFSGDVDPPPHHH---------PHHHHH---LYRQAS-PHSSAVCSSFSGGGGGGIKRER 120
           G  G+    P+H           + H     LYRQAS PHS +  SSFS G    +KRER
Sbjct: 61  GLPGE----PYHQLVASNYKGGGNSHEEAIDLYRQASSPHSHSAVSSFSSGRV--VKRER 120

Query: 121 DLSSEEVELERVCCRVSDEDEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLAR 180
           DLSSEEVE+E+V  RVSDEDEDG N RKKLRL+K+QSALLEESFKQ+STLNPKQKQ LAR
Sbjct: 121 DLSSEEVEVEKVSSRVSDEDEDGSNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALAR 180

Query: 181 HLNLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAH 240
            LNLRPRQVEVWFQNRRARTK+KQTEVDCEFLKKCCETLT+ENRRLQKELQELKALKL+ 
Sbjct: 181 QLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELKALKLSQ 240

Query: 241 PLYMHMPAATLTMCPSCERVGGVGVGVGDGASKPKFSMAPKPHFYNPFSNPSAAC 276
           PLYMHMPAATLTMCPSCER+GGVG    +GASK  FSMAPKPHFYN F+NPSAAC
Sbjct: 241 PLYMHMPAATLTMCPSCERIGGVG---SEGASKSPFSMAPKPHFYNHFTNPSAAC 285

[Close]

BLAST of Cp4.1LG01g09020 vs. TrEMBL
Match: B9HFT7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s14590g PE=4 SV=2)

HSP 1 Score: 320.9 bits (821), Expect = 1.6e-84
Identity = 187/282 (66.31%), Postives = 213/282 (75.53%), Query Frame = 1


Query: 3   LDDVSQTSLVLGLGISEAASPILNNFK---NNKKKKNNKENPTSLEFEPCALTLGFSGD- 62
           LDD   T LVLGLG +   + + N  +   NNK+    +  P    FEP +L+LG S + 
Sbjct: 4   LDDGCNTGLVLGLGFT--TTNLENTSRPADNNKRLIKPQIKPLMTGFEP-SLSLGLSAET 63

Query: 63  ---VDPPP--HHHPHHHHHLYRQASPHSSAVCSSFSGGGGGGIKRERDLSSEEVELERVC 122
              VD           H  LYRQASPHS+   SSFS G    +KRERDLSSE++E+ERV 
Sbjct: 64  YSLVDGKKGCEESIGAHDQLYRQASPHSAV--SSFSSGR---VKRERDLSSEDIEVERVS 123

Query: 123 CRVSDEDEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWF 182
            RVSDEDEDG N RKKLRL+K+QSALLEESFKQ+STLNPKQKQ LAR LNLRPRQVEVWF
Sbjct: 124 SRVSDEDEDGSNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWF 183

Query: 183 QNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHPLYMHMPAATLTM 242
           QNRRARTK+KQTE+DCEFLKKCCETLT+ENRRLQKELQ+LK+LK+A P YMHMPAATLTM
Sbjct: 184 QNRRARTKLKQTEMDCEFLKKCCETLTDENRRLQKELQDLKSLKMAQPFYMHMPAATLTM 243

Query: 243 CPSCERVGGVGVGVGDGASKPKFSMAPKPHFYNPFSNPSAAC 276
           CPSCER+G    GVG+GASK  FSMA KPHFYN F+NPSAAC
Sbjct: 244 CPSCERIG----GVGEGASKSPFSMATKPHFYNSFTNPSAAC 273

[Close]

BLAST of Cp4.1LG01g09020 vs. TrEMBL
Match: D9ZJ03_MALDO (HD domain class transcription factor OS=Malus domestica GN=HD1 PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 1.6e-84
Identity = 196/299 (65.55%), Postives = 218/299 (72.91%), Query Frame = 1


Query: 1   MGLDD-VSQTSLVLGLGISEAA---SPILNNFKNNKKKKNNKENPTSLEFEPCALTLGFS 60
           MG DD    T LVLGLG++ +A   S  L  F  N  K +    PTS  FEP +LTLG S
Sbjct: 1   MGFDDHACNTGLVLGLGLTSSAPQESCNLTKFAKNNIKPSLNSAPTSGAFEP-SLTLGLS 60

Query: 61  GDVDPPPHHHPHHHHH--------------LYRQA----SPHS-SAVCSSFSGGGGGGIK 120
           G+    P+H      +              LYRQA    SPHS SAV +SFS G    +K
Sbjct: 61  GE----PYHQQTVASNIYKVGNSSQDEAIDLYRQAAAASSPHSHSAVSNSFSSGRV--VK 120

Query: 121 RERDLSSEEVEL-ERVCCRVSDEDEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQ 180
           RERDLSSEEV++ E+V  RVSDEDEDG N RKKLRL+K+QSALLEESFKQ+STLNPKQKQ
Sbjct: 121 RERDLSSEEVDVDEKVSSRVSDEDEDGSNARKKLRLTKEQSALLEESFKQHSTLNPKQKQ 180

Query: 181 TLARHLNLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKAL 240
            LAR LNLRPRQVEVWFQNRRARTK+KQTEVDCEFLKKCCETLT+ENRRLQKELQELKAL
Sbjct: 181 ALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELKAL 240

Query: 241 KLAHPLYMHMPAATLTMCPSCERVGGVGVGVGDGASKPKFSMAPKPHFYNPFSNPSAAC 276
           KL  PLYMHMP ATLTMCPSCER+GG G    +G+SK  FSMA KPHFYN F+NPSAAC
Sbjct: 241 KLNQPLYMHMPTATLTMCPSCERIGGAG---SEGSSKSPFSMASKPHFYNHFTNPSAAC 289

[Close]

BLAST of Cp4.1LG01g09020 vs. TAIR10
Match: AT4G37790.1 (AT4G37790.1 Homeobox-leucine zipper protein family)

HSP 1 Score: 283.1 bits (723), Expect = 1.8e-76
Identity = 172/289 (59.52%), Postives = 203/289 (70.24%), Query Frame = 1


Query: 1   MGLDDVSQTSLVLGLGISEAASPILNNFKNNKKKKNNKENPTSLEFEPCALTLGFSGDVD 60
           MGLDD   T LVLGLG+S    P  NN+ +  KK ++  +   +  +P +LTL  SG+  
Sbjct: 1   MGLDDSCNTGLVLGLGLS----PTPNNYNHAIKKSSSTVDHRFIRLDP-SLTLSLSGE-S 60

Query: 61  PPPHHHPHHHHHLYRQASPHSSAVCSSFSGGGGGGIKRERDLS-------SEEVELERVC 120
                       + RQ S HS    SSFS G    +KRER++S       +EE     VC
Sbjct: 61  YKIKTGAGAGDQICRQTSSHSGI--SSFSSGR---VKREREISGGDGEEEAEETTERVVC 120

Query: 121 CRVSDE--DEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEV 180
            RVSD+  DE+G + RKKLRL+KQQSALLE++FK +STLNPKQKQ LAR LNLRPRQVEV
Sbjct: 121 SRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEV 180

Query: 181 WFQNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHPLYMHMPAATL 240
           WFQNRRARTK+KQTEVDCEFLKKCCETLT+ENRRLQKELQ+LKALKL+ P YMHMPAATL
Sbjct: 181 WFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMHMPAATL 240

Query: 241 TMCPSCERVGGVGVG-----VGDGASKPKFSMAPKPHFYNPFSNPSAAC 276
           TMCPSCER+GG GVG     V +  +K  FS+  KP FYNPF+NPSAAC
Sbjct: 241 TMCPSCERLGGGGVGGDTTAVDEETAKGAFSIVTKPRFYNPFTNPSAAC 278

[Close]

BLAST of Cp4.1LG01g09020 vs. TAIR10
Match: AT2G22800.1 (AT2G22800.1 Homeobox-leucine zipper protein family)

HSP 1 Score: 269.6 bits (688), Expect = 2.1e-72
Identity = 171/292 (58.56%), Postives = 194/292 (66.44%), Query Frame = 1


Query: 1   MGLDDVSQTSLVLGLGISEAASPILNNFKNNKKKKNNKENPTSLEFEPCALTLGFSGDVD 60
           MG DD   T LVLGLG     SPI NN+ +  ++ +        + EP +LTL  SGD  
Sbjct: 1   MGFDDTCNTGLVLGLG----PSPIPNNYNSTIRQSS------VYKLEP-SLTLCLSGD-- 60

Query: 61  PPPHHHPHHHHHLYRQASPHSSAVCSSFSGGGGGGIKRERDLSSEEVELERVCCRV-SD- 120
            P          L RQ S HS    SSFS G    +KRERD   E  E E +  RV SD 
Sbjct: 61  -PSVTVVTGADQLCRQTSSHSGV--SSFSSGRV--VKRERDGGEESPEEEEMTERVISDY 120

Query: 121 -EDEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNRR 180
            EDE+G + RKKLRL+KQQSALLEESFK +STLNPKQKQ LAR LNLRPRQVEVWFQNRR
Sbjct: 121 HEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRR 180

Query: 181 ARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHPLYMHMPAATLTMCPSC 240
           ARTK+KQTEVDCEFLKKCCETL +EN RLQKE+QELK LKL  P YMHMPA+TLT CPSC
Sbjct: 181 ARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCPSC 240

Query: 241 ERVGGVGVGVGDG--------------ASKPKFSMAPKPHFYNPFSNPSAAC 276
           ER+GG G G G G               +K  FS++ KPHF+NPF+NPSAAC
Sbjct: 241 ERIGGGGGGNGGGGGGSGATAVIVDGSTAKGAFSISSKPHFFNPFTNPSAAC 274

[Close]

BLAST of Cp4.1LG01g09020 vs. TAIR10
Match: AT5G06710.1 (AT5G06710.1 homeobox from Arabidopsis thaliana)

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-49
Identity = 106/163 (65.03%), Postives = 125/163 (76.69%), Query Frame = 1


Query: 83  AVCSSFS---GGGGGGIKRERDLSSEEVELERVCCRVSDEDEDGCN--TRKKLRLSKQQS 142
           +V SSF    G    G +R  +    + E+ER   R S+ED D  N  TRKKLRLSK QS
Sbjct: 140 SVTSSFQLDFGIKSYGYERRSNKRDIDDEVERSASRASNEDNDDENGSTRKKLRLSKDQS 199

Query: 143 ALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCCE 202
           A LE+SFK++STLNPKQK  LA+ LNLRPRQVEVWFQNRRARTK+KQTEVDCE+LK+CCE
Sbjct: 200 AFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCE 259

Query: 203 TLTNENRRLQKELQELKALKLAHPLYMHMPAATLTMCPSCERV 241
           +LT ENRRLQKE++EL+ LK + P YM +PA TLTMCPSCERV
Sbjct: 260 SLTEENRRLQKEVKELRTLKTSTPFYMQLPATTLTMCPSCERV 302

[Close]

BLAST of Cp4.1LG01g09020 vs. TAIR10
Match: AT3G60390.1 (AT3G60390.1 homeobox-leucine zipper protein 3)

HSP 1 Score: 186.4 bits (472), Expect = 2.3e-47
Identity = 103/164 (62.80%), Postives = 125/164 (76.22%), Query Frame = 1


Query: 95  GIKRERDLSS----------EEVELERVCCRVS--DEDEDGC-----NTRKKLRLSKQQS 154
           G K ER+L +          E+ E+ER  C +    +DEDG      ++RKKLRLSK+Q+
Sbjct: 112 GKKSERELMAAAGAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQA 171

Query: 155 ALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCCE 214
            +LEE+FK++STLNPKQK  LA+ LNLR RQVEVWFQNRRARTK+KQTEVDCE+LK+CCE
Sbjct: 172 LVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCE 231

Query: 215 TLTNENRRLQKELQELKALKLAHPLYMHM-PAATLTMCPSCERV 241
            LT+ENRRLQKE+ EL+ALKL+  LYMHM P  TLTMCPSCERV
Sbjct: 232 NLTDENRRLQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERV 275

[Close]

BLAST of Cp4.1LG01g09020 vs. TAIR10
Match: AT4G16780.1 (AT4G16780.1 homeobox protein 2)

HSP 1 Score: 184.9 bits (468), Expect = 6.8e-47
Identity = 97/139 (69.78%), Postives = 111/139 (79.86%), Query Frame = 1


Query: 103 SSEEVELERVCCRVSDEDEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHL 162
           S  E + +    R   +DEDG N+RKKLRLSK QSA+LEE+FK +STLNPKQKQ LA+ L
Sbjct: 104 SEREEDTDPQGSRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQL 163

Query: 163 NLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHPL 222
            LR RQVEVWFQNRRARTK+KQTEVDCEFL++CCE LT ENRRLQKE+ EL+ALKL+   
Sbjct: 164 GLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQF 223

Query: 223 YMHM-PAATLTMCPSCERV 241
           YMHM P  TLTMCPSCE V
Sbjct: 224 YMHMSPPTTLTMCPSCEHV 242

[Close]

BLAST of Cp4.1LG01g09020 vs. NCBI nr
Match: gi|659098491|ref|XP_008450165.1| (PREDICTED: homeobox-leucine zipper protein HAT22-like [Cucumis melo])

HSP 1 Score: 361.7 bits (927), Expect = 1.1e-96
Identity = 204/281 (72.60%), Postives = 221/281 (78.65%), Query Frame = 1


Query: 1   MGLDDVSQTSLVLGLGISEAASPILNNFKNNKKKKNNKENPTSLEFEPCALTLGFSGDVD 60
           MG DD S+T LVLGLG+SE A    ++ +   KKK    + +SL+FEPC LTLGFSG   
Sbjct: 1   MGFDDFSKTGLVLGLGLSELA----DDQRTTLKKKPAPCSSSSLDFEPCVLTLGFSGGGG 60

Query: 61  PPPHHHPHHH--HHLYRQASPHSSAVCSSFSGGGGGGIKRERDLSSEEVELERVCCRVSD 120
            P      H    HLYRQ SPHSSAVCSSFSG     +KRERDLSSEEVELERVC RVSD
Sbjct: 61  DPHRKVIDHEGVRHLYRQTSPHSSAVCSSFSGK----VKRERDLSSEEVELERVCWRVSD 120

Query: 121 EDEDGCN-TRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNRR 180
           ED+DGCN TRKKLRLSKQQSALLEESFKQNSTLNPKQKQ LAR LNL PRQVEVWFQNRR
Sbjct: 121 EDDDGCNNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQGLARQLNLLPRQVEVWFQNRR 180

Query: 181 ARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHPLYMHMPAATLTMCPSC 240
           ARTK+KQTEVDCE LKKCCETLT+ENRRLQKE+QELKA+KLA P+YM M  ATLT+CPSC
Sbjct: 181 ARTKVKQTEVDCELLKKCCETLTDENRRLQKEVQELKAIKLAKPVYMQMSGATLTICPSC 240

Query: 241 ERV---GGVGVGVGDGASKPKFSMAPKPHFYNPFSNPSAAC 276
           ERV   G  GV  G+  SKPKFSM P P FYNPFSNPSAAC
Sbjct: 241 ERVGTGGHGGVADGNSNSKPKFSMPPNPLFYNPFSNPSAAC 273

[Close]

BLAST of Cp4.1LG01g09020 vs. NCBI nr
Match: gi|778681455|ref|XP_004149840.2| (PREDICTED: homeobox-leucine zipper protein HAT22 [Cucumis sativus])

HSP 1 Score: 358.2 bits (918), Expect = 1.3e-95
Identity = 206/282 (73.05%), Postives = 222/282 (78.72%), Query Frame = 1


Query: 1   MGLDDVSQTSLVLGLGISEAASPILNNFKNNKKKKNNKENPTSLEFEPCALTLGFSGDVD 60
           MG DD S+T LVLGLG+SE A    ++ +   KKK    + +SL+FEPC LTLGFSG   
Sbjct: 65  MGFDDFSKTGLVLGLGLSELA----DDQRTTLKKKPAPCSSSSLDFEPCVLTLGFSGG-G 124

Query: 61  PPPHHHPHHH---HHLYRQASPHSSAVCSSFSGGGGGGIKRERDLSSEEVELERVCCRVS 120
              H     H   HHLYRQASPHSSAVCSSFSG     +KRERDLSSEEVELER C RVS
Sbjct: 125 GDTHRKVIDHVGPHHLYRQASPHSSAVCSSFSGK----VKRERDLSSEEVELERACWRVS 184

Query: 121 DEDEDGCN-TRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNR 180
           DED+D CN TRKKLRLSKQQSALLEESFKQNSTLNPKQKQ LAR LNL PRQVEVWFQNR
Sbjct: 185 DEDDDVCNNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQGLARQLNLLPRQVEVWFQNR 244

Query: 181 RARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHPLYMHMPAATLTMCPS 240
           RARTK+KQTEVDCE LKKCCETLT+ENRRLQKE+QELKA+KLA P+YM M  ATLT+CPS
Sbjct: 245 RARTKVKQTEVDCELLKKCCETLTDENRRLQKEVQELKAIKLAKPVYMQMSGATLTICPS 304

Query: 241 CERVG-GVGVGVGDGAS--KPKFSMAPKPHFYNPFSNPSAAC 276
           CERVG G   GV DG S  KPKFSM P P FYNPFSNPSAAC
Sbjct: 305 CERVGTGGHGGVADGNSNPKPKFSMPPNPFFYNPFSNPSAAC 337

[Close]

BLAST of Cp4.1LG01g09020 vs. NCBI nr
Match: gi|1009145545|ref|XP_015890394.1| (PREDICTED: homeobox-leucine zipper protein HAT22 [Ziziphus jujuba])

HSP 1 Score: 340.5 bits (872), Expect = 2.7e-90
Identity = 201/305 (65.90%), Postives = 222/305 (72.79%), Query Frame = 1


Query: 1   MGLDDVSQTSLVLGLGISEA-----ASPILNNFKNNKKKK--NNKENPTSLEFEPCALTL 60
           MG DDV  T LVL LG + A     +S + +N     KK    N    ++  FEP +LTL
Sbjct: 1   MGFDDVCNTGLVLRLGFTAAQESCPSSKVDSNINERPKKTLVTNFSLSSTSNFEP-SLTL 60

Query: 61  GFSGDVDPPPHHHPH----------------------HHHHLYRQASPHSSAVCSSFSGG 120
           G SG    P HHH                        ++  LYRQ SPHS+   SSFS G
Sbjct: 61  GLSGT--EPGHHHQQQQVVASSCRSSKIDVNKGCEESNNIDLYRQPSPHSAV--SSFSSG 120

Query: 121 GGGGIKRERDLSSEEVELERVCCRVSDEDEDGCNTRKKLRLSKQQSALLEESFKQNSTLN 180
               +KRERDLSSEE+E+ERV  RVSDEDEDG N RKKLRL+K+QSALLEESFKQ+STLN
Sbjct: 121 R---VKRERDLSSEEIEVERVSSRVSDEDEDGSNARKKLRLTKEQSALLEESFKQHSTLN 180

Query: 181 PKQKQTLARHLNLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQ 240
           PKQKQ LAR LNLRPRQVEVWFQNRRARTK+KQTEVDCE LKKCCETLT+ENRRLQKELQ
Sbjct: 181 PKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKKCCETLTDENRRLQKELQ 240

Query: 241 ELKALKLAHPLYMHMPAATLTMCPSCERV-GGVGVGVGDGASKPKFSMAPKPHFYNPFSN 276
           ELKALKLA PLYMHMPAATLTMCPSCER+ GGVGVGV DGA+K  FSMAPKPHFYNPF+N
Sbjct: 241 ELKALKLAQPLYMHMPAATLTMCPSCERLGGGVGVGVVDGATKSPFSMAPKPHFYNPFNN 297

[Close]

BLAST of Cp4.1LG01g09020 vs. NCBI nr
Match: gi|590706123|ref|XP_007047635.1| (Homeodomain-leucine zipper protein HD4 [Theobroma cacao])

HSP 1 Score: 338.2 bits (866), Expect = 1.4e-89
Identity = 200/294 (68.03%), Postives = 218/294 (74.15%), Query Frame = 1


Query: 1   MGLDDVSQTSLVLGLGISEAA-SPILNNFKNNKKKKNNKENPTSL---EFEPCALTLGFS 60
           MGLDD   T LVLGLG S    +P   N +  KK    K  PT++    FEP +LTLG S
Sbjct: 1   MGLDDACNTGLVLGLGFSSTLETPSKANNQTPKKSSCLKFEPTAMAAASFEP-SLTLGLS 60

Query: 61  G------------DVDPPPHHH---PHHHHHLYRQASPHSSAVCSSFSGGGGGGIKRERD 120
           G            DV+   +HH   P     LYRQASPHS+   SSFS G    +KRERD
Sbjct: 61  GESYQVVTASKKIDVNKGGYHHHEEPAAAGDLYRQASPHSAV--SSFSSGR---VKRERD 120

Query: 121 LSSEEVELERVCCRVSDEDEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARH 180
           LSSEEVE+E+   RVSDEDEDG N RKKLRL+K QSALLEESFKQ+STLNPKQKQ LAR 
Sbjct: 121 LSSEEVEVEKNSSRVSDEDEDGVNARKKLRLTKDQSALLEESFKQHSTLNPKQKQALARQ 180

Query: 181 LNLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHP 240
           L+LRPRQVEVWFQNRRARTK+KQTEVDCEFLKKCCETLT+ENRRLQKELQELKALKLA P
Sbjct: 181 LSLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELKALKLAQP 240

Query: 241 LYMHMPAATLTMCPSCERVGGVGVGVGDGASKPKFSMAPKPHFYNPFSNPSAAC 276
            YMHMPAATLTMCPSCER+G    GVGDG SK  FSMA KPHFYNPF+NPSAAC
Sbjct: 241 FYMHMPAATLTMCPSCERIG----GVGDGNSKSPFSMASKPHFYNPFTNPSAAC 284

[Close]

BLAST of Cp4.1LG01g09020 vs. NCBI nr
Match: gi|595827085|ref|XP_007205679.1| (hypothetical protein PRUPE_ppa009614mg [Prunus persica])

HSP 1 Score: 332.0 bits (850), Expect = 9.7e-88
Identity = 196/295 (66.44%), Postives = 219/295 (74.24%), Query Frame = 1


Query: 1   MGLDD-VSQTSLVLGLGISEAAS------PILNNFKNNKKKKNNKENPTSLEFEPCALTL 60
           MG DD    T LVLGLG++ ++       P  +N      K +    PTS  FEP +LTL
Sbjct: 1   MGFDDHPCNTGLVLGLGLTTSSPQESTSPPKAHNPSRFANKPSPNSAPTSATFEP-SLTL 60

Query: 61  GFSGDVDPPPHHH---------PHHHHH---LYRQAS-PHSSAVCSSFSGGGGGGIKRER 120
           G  G+    P+H           + H     LYRQAS PHS +  SSFS G    +KRER
Sbjct: 61  GLPGE----PYHQLVASNYKGGGNSHEEAIDLYRQASSPHSHSAVSSFSSGRV--VKRER 120

Query: 121 DLSSEEVELERVCCRVSDEDEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLAR 180
           DLSSEEVE+E+V  RVSDEDEDG N RKKLRL+K+QSALLEESFKQ+STLNPKQKQ LAR
Sbjct: 121 DLSSEEVEVEKVSSRVSDEDEDGSNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALAR 180

Query: 181 HLNLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAH 240
            LNLRPRQVEVWFQNRRARTK+KQTEVDCEFLKKCCETLT+ENRRLQKELQELKALKL+ 
Sbjct: 181 QLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELKALKLSQ 240

Query: 241 PLYMHMPAATLTMCPSCERVGGVGVGVGDGASKPKFSMAPKPHFYNPFSNPSAAC 276
           PLYMHMPAATLTMCPSCER+GGVG    +GASK  FSMAPKPHFYN F+NPSAAC
Sbjct: 241 PLYMHMPAATLTMCPSCERIGGVG---SEGASKSPFSMAPKPHFYNHFTNPSAAC 285

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g09020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HAT22_ARATH	3.2e-75	59.52	Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1	[more]
HAT9_ARATH	3.7e-71	58.56	Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2	[more]
HOX11_ORYSI	1.7e-52	68.26	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=...	[more]
HOX11_ORYSJ	1.7e-52	68.26	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 P...	[more]
HOX19_ORYSI	1.5e-51	56.62	Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=...	[more]

BLAST of Cp4.1LG01g09020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBR7_CUCSA	8.8e-96	73.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G510960 PE=4 SV=1	[more]
A0A061DHW3_THECC	9.4e-90	68.03	Homeodomain-leucine zipper protein HD4 OS=Theobroma cacao GN=TCM_000867 PE=4 SV=...	[more]
M5WC80_PRUPE	6.8e-88	66.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009614mg PE=4 SV=1	[more]
B9HFT7_POPTR	1.6e-84	66.31	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s14590g PE=4 SV=2	[more]
D9ZJ03_MALDO	1.6e-84	65.55	HD domain class transcription factor OS=Malus domestica GN=HD1 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g09020 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G37790.1	1.8e-76	59.52	Homeobox-leucine zipper protein family	[more]
AT2G22800.1	2.1e-72	58.56	Homeobox-leucine zipper protein family	[more]
AT5G06710.1	1.1e-49	65.03	homeobox from Arabidopsis thaliana	[more]
AT3G60390.1	2.3e-47	62.80	homeobox-leucine zipper protein 3	[more]
AT4G16780.1	6.8e-47	69.78	homeobox protein 2	[more]

BLAST of Cp4.1LG01g09020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098491\|ref\|XP_008450165.1\|	1.1e-96	72.60	PREDICTED: homeobox-leucine zipper protein HAT22-like [Cucumis melo]	[more]
gi\|778681455\|ref\|XP_004149840.2\|	1.3e-95	73.05	PREDICTED: homeobox-leucine zipper protein HAT22 [Cucumis sativus]	[more]
gi\|1009145545\|ref\|XP_015890394.1\|	2.7e-90	65.90	PREDICTED: homeobox-leucine zipper protein HAT22 [Ziziphus jujuba]	[more]
gi\|590706123\|ref\|XP_007047635.1\|	1.4e-89	68.03	Homeodomain-leucine zipper protein HD4 [Theobroma cacao]	[more]
gi\|595827085\|ref\|XP_007205679.1\|	9.7e-88	66.44	hypothetical protein PRUPE_ppa009614mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR017970	Homeobox_CS
IPR009057	Homeobox-like_sf
IPR003106	Leu_zip_homeo
IPR001356	Homeobox_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g09020.1	Cp4.1LG01g09020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 127..181 score: 1.0
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 125..187 score: 1.3
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 123..183 score: 17
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 183..217 score: 4.1
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 183..226 score: 2.1
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 132..181 score: 6.0
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 121..184 score: 3.47
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 158..181 scor
None	No IPR available	unknown	Coil	Coil	coord: 189..219 scor
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 96..270 score: 2.4E
None	No IPR available	PANTHER	PTHR24326:SF252	HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9	coord: 96..270 score: 2.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g09020	CmaCh04G008460	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g09020	CmoCh04G009070	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g09020	MELO3C014944	Melon (DHL92) v3.5.1	cpemeB409
Cp4.1LG01g09020	ClCG10G008310	Watermelon (Charleston Gray)	cpewcgB349
Cp4.1LG01g09020	Lsi05G008100	Bottle gourd (USVL1VR-Ls)	cpelsiB370
Cp4.1LG01g09020	MELO3C014944.2	Melon (DHL92) v3.6.1	cpemedB485
Cp4.1LG01g09020	Bhi11G000721	Wax gourd	cpewgoB0478
Cp4.1LG01g09020	Carg14246	Silver-seed gourd	carcpeB1302

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g09020	Cucumber (Chinese Long) v3	cpecucB0491
Cp4.1LG01g09020	Wax gourd	cpewgoB0486
Cp4.1LG01g09020	Cucurbita pepo (Zucchini)	cpecpeB073
Cp4.1LG01g09020	Cucurbita pepo (Zucchini)	cpecpeB233
Cp4.1LG01g09020	Cucurbita pepo (Zucchini)	cpecpeB385
Cp4.1LG01g09020	Cucumber (Gy14) v1	cgycpeB0219
Cp4.1LG01g09020	Cucurbita maxima (Rimu)	cmacpeB350
Cp4.1LG01g09020	Cucurbita maxima (Rimu)	cmacpeB876
Cp4.1LG01g09020	Cucurbita moschata (Rifu)	cmocpeB312
Cp4.1LG01g09020	Cucurbita moschata (Rifu)	cmocpeB613
Cp4.1LG01g09020	Cucurbita moschata (Rifu)	cmocpeB813
Cp4.1LG01g09020	Bottle gourd (USVL1VR-Ls)	cpelsiB326
Cp4.1LG01g09020	Watermelon (Charleston Gray)	cpewcgB374
Cp4.1LG01g09020	Melon (DHL92) v3.5.1	cpemeB434
Cp4.1LG01g09020	Cucumber (Gy14) v2	cgybcpeB369
Cp4.1LG01g09020	Cucumber (Gy14) v2	cgybcpeB808
Cp4.1LG01g09020	Melon (DHL92) v3.6.1	cpemedB509
Cp4.1LG01g09020	Silver-seed gourd	carcpeB0562
Cp4.1LG01g09020	Silver-seed gourd	carcpeB1417