Carg14246 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTACTTTGAGATTCTTTTGTCTTCTGAATTCTTTAATTTCTTCTGGATTAATAATCATTCCCACCCACCCACACAAACACAAACACAAATACAAACACAAACACAAACACACCCATCTCTCTCCTTTTTCCTCTTCTTAAACCCTTCATTTTGGTTTGTTGTTCTCCACAACTTCCATCTTTTTCCACACAAATCCCTCAACTCAACTCAACTCTAGATGGGTTTGGATGATGTTTCTCAAACAAGCTTGGTTTTGGGGTTGGGGATATCAGAAGCTGCTTCTCCAATTATTAACAACTTGAAGAACAACAAGAAGAAGAAGAACAACAAGAATCCTACTTCACTTGAGTTTGAGCCTTGTGCTTTGACTTTGGGATTTTCAGGCGATGTTGATCCTCCTCGTCATCATCCTCATCATCATCATCATTTGTATCGCCAAGCTTCCCCTCATAGCAGCGCTGTTTGTTCTTCCTTCTCCGGGGGCGGTGGCGGTGGGATTAAAAGGGAGAGAGACCTCAGCAGTGAAGAAGTTGAATTGGAGAGAGTTTGTTGTAGAGTTAGTGATGAAGATGAAGATGGTTGTAATACTAGGAAGAAGCTTAGGCTTTCTAAACAACAATCCGCGCTATTGGAAGAGAGTTTCAAACAAAATAGCACTCTCAACCCCGTAAGTTTCTCTATATACATACCACTACTAAATCAATTATATATATCCTTTATTCATATTCTCTCATTCTTTTCATCAGAAACAAAAGCAAACCTTAGCCAGACACCTAAACCTACGCCCAAGACAAGTGGAAGTATGGTTTCAAAATAGGAGAGCTCGGTGAGTGAGTTCCATCCCAATTTCAATCCATTTTAATATTCTACTACTTCTCTACATCATCCATTACATCTCTCAACCTTTCTTTCTTTTCTCTTCTGTTTTTCAGAACAAAAATGAAACAAACAGAAGTAGACTGTGAGTTCTTGAAGAAATGTTGTGAGACGTTGACAAACGAAAATAGAAGACTACAGAAGGAGCTTCAAGAATTGAAAGCGCTAAAGCTCGCACACCCGCTGTACATGCACATGCCAGCAGCAACGCTAACCATGTGCCCATCCTGCGAAAGGGTGGGTGGCGTTGGCGTTGGCGTTGGCGATGGCGCTTCCAAACCCAAATTTTCAATGGCTCCCAAGCCCCACTTTTACAACCCCTTCTCCAATCCTTCAGCCGCATGTTAGAAAATTAATGTACACCATTTACAAGCTACACAAAATAACACTATACTCATATTTTTCTCCTTCTTCTTCTTCAAAACGCCATAGCTAGCTTAGAAATTGGAGAAATTTAGTGTAACTATTAGCTACCCTTGTACAAGCTTACCCTTAAGATCAAATTATCATCCGTAGTAAAGATTTTAAACTCTATCTAGAAATTAATCAAGGATTGGTGGGTATATAATGTAATTTTTTTTAAATCGATTTTTAGAATGGTAATTGATGTTTTATTTACTAAATTATGTATGATCGACCGACCATCCAACCGACGATCCAGTGACGCAAAATGGATGGTGTGTTGGATTGGGAAAAATTATTGGGTGGTGTTGGTGTAAGGGGCTATCTATCTATCTCATTGGCTGCCTACGTGTTACGCAAGGGATGACATTGATATGACTTTTGCTATTTTATTAGTGCGTTTTGGCTTCATTGTTCAATATGATACAATGATAATAATAATACA TTACTTTGAGATTCTTTTGTCTTCTGAATTCTTTAATTTCTTCTGGATTAATAATCATTCCCACCCACCCACACAAACACAAACACAAATACAAACACAAACACAAACACACCCATCTCTCTCCTTTTTCCTCTTCTTAAACCCTTCATTTTGGTTTGTTGTTCTCCACAACTTCCATCTTTTTCCACACAAATCCCTCAACTCAACTCAACTCTAGATGGGTTTGGATGATGTTTCTCAAACAAGCTTGGTTTTGGGGTTGGGGATATCAGAAGCTGCTTCTCCAATTATTAACAACTTGAAGAACAACAAGAAGAAGAAGAACAACAAGAATCCTACTTCACTTGAGTTTGAGCCTTGTGCTTTGACTTTGGGATTTTCAGGCGATGTTGATCCTCCTCGTCATCATCCTCATCATCATCATCATTTGTATCGCCAAGCTTCCCCTCATAGCAGCGCTGTTTGTTCTTCCTTCTCCGGGGGCGGTGGCGGTGGGATTAAAAGGGAGAGAGACCTCAGCAGTGAAGAAGTTGAATTGGAGAGAGTTTGTTGTAGAGTTAGTGATGAAGATGAAGATGGTTGTAATACTAGGAAGAAGCTTAGGCTTTCTAAACAACAATCCGCGCTATTGGAAGAGAGTTTCAAACAAAATAGCACTCTCAACCCCAAACAAAAGCAAACCTTAGCCAGACACCTAAACCTACGCCCAAGACAAGTGGAAGTATGGTTTCAAAATAGGAGAGCTCGAACAAAAATGAAACAAACAGAAGTAGACTGTGAGTTCTTGAAGAAATGTTGTGAGACGTTGACAAACGAAAATAGAAGACTACAGAAGGAGCTTCAAGAATTGAAAGCGCTAAAGCTCGCACACCCGCTGTACATGCACATGCCAGCAGCAACGCTAACCATGTGCCCATCCTGCGAAAGGGTGGGTGGCGTTGGCGTTGGCGTTGGCGATGGCGCTTCCAAACCCAAATTTTCAATGGCTCCCAAGCCCCACTTTTACAACCCCTTCTCCAATCCTTCAGCCGCATGTTAGAAAATTAATGTACACCATTTACAAGCTACACAAAATAACACTATACTCATATTTTTCTCCTTCTTCTTCTTCAAAACGCCATAGCTAGCTTAGAAATTGGAGAAATTTAGTGTAACTATTAGCTACCCTTGTACAAGCTTACCCTTAAGATCAAATTATCATCCGTAGTAAAGATTTTAAACTCTATCTAGAAATTAATCAAGGATTGGTGGGTATATAATGTAATTTTTTTTAAATCGATTTTTAGAATGGTAATTGATGTTTTATTTACTAAATTATGTATGATCGACCGACCATCCAACCGACGATCCAGTGACGCAAAATGGATGGTGTGTTGGATTGGGAAAAATTATTGGGTGGTGTTGGTGTAAGGGGCTATCTATCTATCTCATTGGCTGCCTACGTGTTACGCAAGGGATGACATTGATATGACTTTTGCTATTTTATTAGTGCGTTTTGGCTTCATTGTTCAATATGATACAATGATAATAATAATACA ATGGGTTTGGATGATGTTTCTCAAACAAGCTTGGTTTTGGGGTTGGGGATATCAGAAGCTGCTTCTCCAATTATTAACAACTTGAAGAACAACAAGAAGAAGAAGAACAACAAGAATCCTACTTCACTTGAGTTTGAGCCTTGTGCTTTGACTTTGGGATTTTCAGGCGATGTTGATCCTCCTCGTCATCATCCTCATCATCATCATCATTTGTATCGCCAAGCTTCCCCTCATAGCAGCGCTGTTTGTTCTTCCTTCTCCGGGGGCGGTGGCGGTGGGATTAAAAGGGAGAGAGACCTCAGCAGTGAAGAAGTTGAATTGGAGAGAGTTTGTTGTAGAGTTAGTGATGAAGATGAAGATGGTTGTAATACTAGGAAGAAGCTTAGGCTTTCTAAACAACAATCCGCGCTATTGGAAGAGAGTTTCAAACAAAATAGCACTCTCAACCCCAAACAAAAGCAAACCTTAGCCAGACACCTAAACCTACGCCCAAGACAAGTGGAAGTATGGTTTCAAAATAGGAGAGCTCGAACAAAAATGAAACAAACAGAAGTAGACTGTGAGTTCTTGAAGAAATGTTGTGAGACGTTGACAAACGAAAATAGAAGACTACAGAAGGAGCTTCAAGAATTGAAAGCGCTAAAGCTCGCACACCCGCTGTACATGCACATGCCAGCAGCAACGCTAACCATGTGCCCATCCTGCGAAAGGGTGGGTGGCGTTGGCGTTGGCGTTGGCGATGGCGCTTCCAAACCCAAATTTTCAATGGCTCCCAAGCCCCACTTTTACAACCCCTTCTCCAATCCTTCAGCCGCATGTTAG MGLDDVSQTSLVLGLGISEAASPIINNLKNNKKKKNNKNPTSLEFEPCALTLGFSGDVDPPRHHPHHHHHLYRQASPHSSAVCSSFSGGGGGGIKRERDLSSEEVELERVCCRVSDEDEDGCNTRKKLRLSKQQSALLEESFKQNSTLNPKQKQTLARHLNLRPRQVEVWFQNRRARTKMKQTEVDCEFLKKCCETLTNENRRLQKELQELKALKLAHPLYMHMPAATLTMCPSCERVGGVGVGVGDGASKPKFSMAPKPHFYNPFSNPSAAC
BLAST of Carg14246 vs. NCBI nr
Match: XP_023547039.1 (homeobox-leucine zipper protein HAT22-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115 Identity = 269/275 (97.82%), Postives = 270/275 (98.18%), Query Frame = 0
BLAST of Carg14246 vs. NCBI nr
Match: XP_022943239.1 (homeobox-leucine zipper protein HAT22-like [Cucurbita moschata] >XP_022943241.1 homeobox-leucine zipper protein HAT22-like [Cucurbita moschata]) HSP 1 Score: 422.9 bits (1086), Expect = 8.1e-115 Identity = 268/273 (98.17%), Postives = 268/273 (98.17%), Query Frame = 0
BLAST of Carg14246 vs. NCBI nr
Match: XP_023000993.1 (homeobox-leucine zipper protein HAT22-like [Cucurbita maxima]) HSP 1 Score: 409.8 bits (1052), Expect = 7.1e-111 Identity = 265/277 (95.67%), Postives = 266/277 (96.03%), Query Frame = 0
BLAST of Carg14246 vs. NCBI nr
Match: XP_022136472.1 (homeobox-leucine zipper protein HAT22-like [Momordica charantia]) HSP 1 Score: 333.2 bits (853), Expect = 8.4e-88 Identity = 204/276 (73.91%), Postives = 219/276 (79.35%), Query Frame = 0
BLAST of Carg14246 vs. NCBI nr
Match: XP_008450165.1 (PREDICTED: homeobox-leucine zipper protein HAT22-like [Cucumis melo]) HSP 1 Score: 317.4 bits (812), Expect = 4.8e-83 Identity = 184/278 (66.19%), Postives = 197/278 (70.86%), Query Frame = 0
BLAST of Carg14246 vs. TAIR10
Match: AT4G37790.1 (Homeobox-leucine zipper protein family) HSP 1 Score: 262.3 bits (669), Expect = 3.3e-70 Identity = 157/287 (54.70%), Postives = 185/287 (64.46%), Query Frame = 0
BLAST of Carg14246 vs. TAIR10
Match: AT2G22800.1 (Homeobox-leucine zipper protein family) HSP 1 Score: 243.0 bits (619), Expect = 2.1e-64 Identity = 155/290 (53.45%), Postives = 174/290 (60.00%), Query Frame = 0
BLAST of Carg14246 vs. TAIR10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana) HSP 1 Score: 193.0 bits (489), Expect = 2.5e-49 Identity = 99/135 (73.33%), Postives = 114/135 (84.44%), Query Frame = 0
BLAST of Carg14246 vs. TAIR10
Match: AT4G16780.1 (homeobox protein 2) HSP 1 Score: 184.5 bits (467), Expect = 8.8e-47 Identity = 97/139 (69.78%), Postives = 111/139 (79.86%), Query Frame = 0
BLAST of Carg14246 vs. TAIR10
Match: AT3G60390.1 (homeobox-leucine zipper protein 3) HSP 1 Score: 171.4 bits (433), Expect = 7.7e-43 Identity = 86/112 (76.79%), Postives = 100/112 (89.29%), Query Frame = 0
BLAST of Carg14246 vs. Swiss-Prot
Match: sp|P46604|HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana OX=3702 GN=HAT22 PE=1 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 6.0e-69 Identity = 157/287 (54.70%), Postives = 185/287 (64.46%), Query Frame = 0
BLAST of Carg14246 vs. Swiss-Prot
Match: sp|P46603|HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana OX=3702 GN=HAT9 PE=1 SV=2) HSP 1 Score: 243.0 bits (619), Expect = 3.7e-63 Identity = 155/290 (53.45%), Postives = 174/290 (60.00%), Query Frame = 0
BLAST of Carg14246 vs. Swiss-Prot
Match: sp|P46665|HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 PE=2 SV=3) HSP 1 Score: 193.0 bits (489), Expect = 4.4e-48 Identity = 99/135 (73.33%), Postives = 114/135 (84.44%), Query Frame = 0
BLAST of Carg14246 vs. Swiss-Prot
Match: sp|A2Z1U1|HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=HOX11 PE=2 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 7.1e-46 Identity = 90/110 (81.82%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of Carg14246 vs. Swiss-Prot
Match: sp|Q67UE2|HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX11 PE=2 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 7.1e-46 Identity = 90/110 (81.82%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of Carg14246 vs. TrEMBL
Match: tr|A0A1S3BNL6|A0A1S3BNL6_CUCME (homeobox-leucine zipper protein HAT22-like OS=Cucumis melo OX=3656 GN=LOC103491835 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 3.2e-83 Identity = 184/278 (66.19%), Postives = 197/278 (70.86%), Query Frame = 0
BLAST of Carg14246 vs. TrEMBL
Match: tr|A0A0A0LBR7|A0A0A0LBR7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G510960 PE=4 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 1.3e-81 Identity = 182/277 (65.70%), Postives = 194/277 (70.04%), Query Frame = 0
BLAST of Carg14246 vs. TrEMBL
Match: tr|A0A2P5F2Y1|A0A2P5F2Y1_9ROSA (Octamer-binding transcription factor OS=Trema orientalis OX=63057 GN=TorRG33x02_119750 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.7e-81 Identity = 157/179 (87.71%), Postives = 169/179 (94.41%), Query Frame = 0
BLAST of Carg14246 vs. TrEMBL
Match: tr|A0A2P5E5J0|A0A2P5E5J0_PARAD (Octamer-binding transcription factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_003730 PE=4 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 1.5e-80 Identity = 156/179 (87.15%), Postives = 168/179 (93.85%), Query Frame = 0
BLAST of Carg14246 vs. TrEMBL
Match: tr|A0A2I4HM96|A0A2I4HM96_9ROSI (homeobox-leucine zipper protein HAT22-like OS=Juglans regia OX=51240 GN=LOC109019457 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 1.9e-80 Identity = 180/280 (64.29%), Postives = 193/280 (68.93%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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