Cp4.1LG01g09000 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g09000
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger homeodomain protein 1
LocationCp4.1LG01 : 4457644 .. 4458348 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTTCGAGGATCACGAAGAAGAAGAAGAAGACATGGAAATGGAAGCTCCAACAAACTACGACAAACCACTTCTCCAAACCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACTTTCCCGCCTCAACAAAACCCCATCTCCGCTCCACTCCAACCCCCCTCCTCCCCCCCTCTACAAAGAGTGCTTAAAAAACCACGCCGTCGCCATCGGTGGCCACTCCATCGACGGCTGCGGCGAGTTCATGCCCGCCGGCCCAAACGGCTCTCTCGACGCCCTCAAATGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAAAGACATTACCACCAACGACGACAACGGAGAATCACCACCGTTCATCTTATCGAACCCACCACCAACCGCCCAGTTCGTTCCCTACTGGCGTGCTCCAGCTGGCTACCTCCACGTGGCACCCCAACGACGAATGCTGGCACTCCCATCGCCTTCAAGTGGAGACGGCGGATGCAGAAAGCGGGTAAGGACAAAATTCACGGAGGAGCAGAAGGAAAAGATGCTGGTGATGGCGGAGAAGCTGGATTGGCGCATTCAAAAGAACGATGAAGCGGCGGTGATGGAATTCTGCAACGAAATCGGGGTGAAACGCCGAGTGTTGAAGGTTTGGATGCATAACAACAAGAACACGTTTCGTAAGGAGTCTGAAAACAACAAATTCTCGTAA

mRNA sequence

ATGGATTTCGAGGATCACGAAGAAGAAGAAGAAGACATGGAAATGGAAGCTCCAACAAACTACGACAAACCACTTCTCCAAACCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACTTTCCCGCCTCAACAAAACCCCATCTCCGCTCCACTCCAACCCCCCTCCTCCCCCCCTCTACAAAGAGTGCTTAAAAAACCACGCCGTCGCCATCGGTGGCCACTCCATCGACGGCTGCGGCGAGTTCATGCCCGCCGGCCCAAACGGCTCTCTCGACGCCCTCAAATGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAAAGACATTACCACCAACGACGACAACGGAGAATCACCACCGTTCATCTTATCGAACCCACCACCAACCGCCCAGTTCGTTCCCTACTGGCGTGCTCCAGCTGGCTACCTCCACGTGGCACCCCAACGACGAATGCTGGCACTCCCATCGCCTTCAAGTGGAGACGGCGGATGCAGAAAGCGGGTAAGGACAAAATTCACGGAGGAGCAGAAGGAAAAGATGCTGGTGATGGCGGAGAAGCTGGATTGGCGCATTCAAAAGAACGATGAAGCGGCGGTGATGGAATTCTGCAACGAAATCGGGGTGAAACGCCGAGTGTTGAAGGTTTGGATGCATAACAACAAGAACACGTTTCGTAAGGAGTCTGAAAACAACAAATTCTCGTAA

Coding sequence (CDS)

ATGGATTTCGAGGATCACGAAGAAGAAGAAGAAGACATGGAAATGGAAGCTCCAACAAACTACGACAAACCACTTCTCCAAACCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCACTTTCCCGCCTCAACAAAACCCCATCTCCGCTCCACTCCAACCCCCCTCCTCCCCCCCTCTACAAAGAGTGCTTAAAAAACCACGCCGTCGCCATCGGTGGCCACTCCATCGACGGCTGCGGCGAGTTCATGCCCGCCGGCCCAAACGGCTCTCTCGACGCCCTCAAATGCGCCGCCTGCAACTGCCACCGCAACTTCCACCGCAAAGACATTACCACCAACGACGACAACGGAGAATCACCACCGTTCATCTTATCGAACCCACCACCAACCGCCCAGTTCGTTCCCTACTGGCGTGCTCCAGCTGGCTACCTCCACGTGGCACCCCAACGACGAATGCTGGCACTCCCATCGCCTTCAAGTGGAGACGGCGGATGCAGAAAGCGGGTAAGGACAAAATTCACGGAGGAGCAGAAGGAAAAGATGCTGGTGATGGCGGAGAAGCTGGATTGGCGCATTCAAAAGAACGATGAAGCGGCGGTGATGGAATTCTGCAACGAAATCGGGGTGAAACGCCGAGTGTTGAAGGTTTGGATGCATAACAACAAGAACACGTTTCGTAAGGAGTCTGAAAACAACAAATTCTCGTAA

Protein sequence

MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPPPPLYKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDNGESPPFILSNPPPTAQFVPYWRAPAGYLHVAPQRRMLALPSPSSGDGGCRKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRKESENNKFS
Homology
[Close]
BLAST of Cp4.1LG01g09000 vs. Swiss-Prot
Match: ZHD1_ORYSJ (Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. japonica GN=ZHD1 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.7e-48
Identity = 126/285 (44.21%), Postives = 157/285 (55.09%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDME-MEAPTNYDKPL---LQTPPPPPPPPPPLSRLNKTPSPLHSNPPPP 60
           MDF+DH++ +E+M  M   ++Y+ P    L      P PP  +    K PS         
Sbjct: 1   MDFDDHDDGDEEMPPMPVSSSYETPPQHGLAGGGMAPKPPGEIGSRVKGPSCGGGR---- 60

Query: 61  PLYKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDNG 120
             Y+ECLKNHAV IGGH++DGCGEFM AG  G++DAL+CAACNCHRNFHRK+  +    G
Sbjct: 61  --YRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKE--SESLAG 120

Query: 121 ESPPF-----ILSNPPPTAQFVPYWRAPAGYLHVAPQ-----------------RRMLAL 180
           E  PF     +     P  QF PY+R PAGYLH                     +R LAL
Sbjct: 121 EGSPFSPAAVVPYGATPHHQFSPYYRTPAGYLHHHQHHMAAAAAAAAAAAGGYPQRPLAL 180

Query: 181 PSPS--------------------------------SGDGGCRKRVRTKFTEEQKEKMLV 228
           PS S                                SG G  +KR RTKFT+EQK+KML 
Sbjct: 181 PSTSHSGRDDGDDLSGMVGPMSAVGPLSGMSLGAGPSGSGSGKKRFRTKFTQEQKDKMLA 240

[Close]
BLAST of Cp4.1LG01g09000 vs. Swiss-Prot
Match: ZHD1_ORYSI (Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. indica GN=ZHD1 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.2e-48
Identity = 126/285 (44.21%), Postives = 157/285 (55.09%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDME-MEAPTNYDKPL---LQTPPPPPPPPPPLSRLNKTPSPLHSNPPPP 60
           MDF+DH++ +E+M  M   ++Y+ P    L      P PP  +    K PS         
Sbjct: 1   MDFDDHDDGDEEMPPMPVSSSYETPPQHGLAGGGMAPKPPGEIGSHVKGPSCGGGR---- 60

Query: 61  PLYKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDNG 120
             Y+ECLKNHAV IGGH++DGCGEFM AG  G++DAL+CAACNCHRNFHRK+  +    G
Sbjct: 61  --YRECLKNHAVGIGGHAVDGCGEFMAAGEEGTIDALRCAACNCHRNFHRKE--SESLAG 120

Query: 121 ESPPF-----ILSNPPPTAQFVPYWRAPAGYLHVAPQ-----------------RRMLAL 180
           E  PF     +     P  QF PY+R PAGYLH                     +R LAL
Sbjct: 121 EGSPFSPAAVVPYGATPHHQFSPYYRTPAGYLHHHQHHMAAAAAAAAAAAGGHPQRPLAL 180

Query: 181 PSPS--------------------------------SGDGGCRKRVRTKFTEEQKEKMLV 228
           PS S                                SG G  +KR RTKFT+EQK+KML 
Sbjct: 181 PSTSHSGRDDGDDLSGMVGPMSAVGPLSGMSLGAGPSGSGSGKKRFRTKFTQEQKDKMLA 240

[Close]
BLAST of Cp4.1LG01g09000 vs. Swiss-Prot
Match: ZHD2_ARATH (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 6.2e-43
Identity = 110/236 (46.61%), Postives = 135/236 (57.20%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPPPPLYK 60
           M+FED EE+ E   +  P  YD   L            + R     + +         Y+
Sbjct: 1   MNFEDQEEDMEMSGVNPPCGYDS--LSGEGATSSGGGGVGRSKGVGAKIR--------YR 60

Query: 61  ECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDNGESPP 120
           ECLKNHAV IGGH++DGC EFMP+G +G+LDALKCAAC CHRNFHRK+  +        P
Sbjct: 61  ECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRAHRVP 120

Query: 121 FILSNPPPTAQFVPYWRAPAGYLHV----APQRRMLAL-----PSPSSGDGGCRKRVRTK 180
              + PP   Q       P GYLH+    AP R   A       S  S  GG  KR RTK
Sbjct: 121 TYYNRPPQPHQ-------PPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFRTK 180

Query: 181 FTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRKE 228
           FT EQKEKML  AE+L WRIQK+D+ AV +FC E GV+R+VLK+WMHNNKN+  K+
Sbjct: 181 FTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSLGKK 219

[Close]
BLAST of Cp4.1LG01g09000 vs. Swiss-Prot
Match: ZHD3_ORYSJ (Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica GN=ZHD3 PE=3 SV=3)

HSP 1 Score: 168.3 bits (425), Expect = 9.9e-41
Identity = 96/219 (43.84%), Postives = 121/219 (55.25%), Query Frame = 1 

Query: 33  PPPPPPLSRLNKTPSPLHSNPPPPPLYKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDA 92
           PP PP  +  +K    + S+      Y+ECLKNHA AIGG + DGCGEFMP G  GSLDA
Sbjct: 48  PPTPPAAAEESKAVVVVSSSATAAARYRECLKNHAAAIGGSATDGCGEFMPGGEEGSLDA 107

Query: 93  LKCAACNCHRNFHRKDITTNDDNGESPP-------------------------FILSNPP 152
           L+C+AC CHRNFHRK++    D   +PP                          + + PP
Sbjct: 108 LRCSACGCHRNFHRKEL----DAAAAPPLHHHHHQLLGVGAHPRGHGHHHHHLLVAALPP 167

Query: 153 PTAQFVPYWRAPAGYLHVAPQRRMLALPSPSSGDGGCRKRVRTKFTEEQKEKMLVMAEKL 212
           PT   +     P   +H +      A P    G    RKR RTKFT EQK +ML  AE++
Sbjct: 168 PTRMVM-----PLSAMHTSESDDAAARP---GGGAAARKRFRTKFTAEQKARMLGFAEEV 227

Query: 213 DWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRK 227
            WR+QK ++A V  FC E+GVKRRVLKVWMHNNK+T  +
Sbjct: 228 GWRLQKLEDAVVQRFCQEVGVKRRVLKVWMHNNKHTLAR 254

[Close]
BLAST of Cp4.1LG01g09000 vs. Swiss-Prot
Match: ZHD1_ARATH (Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.9e-40
Identity = 108/259 (41.70%), Postives = 142/259 (54.83%), Query Frame = 1 

Query: 1   MDFEDH-----EEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSP------- 60
           M+FED+     EE+EEDM +      D  +  +PP     P   +  ++T          
Sbjct: 1   MEFEDNNNNNDEEQEEDMNLHEEEEDDDAVYDSPPLSRVLPKASTESHETTGTTSTGGGG 60

Query: 61  ----LHSNPPPPPLYKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNF 120
               +H        ++ECLKN AV IGGH++DGCGEFMPAG  G++DALKCAAC CHRNF
Sbjct: 61  GFMVVHGGGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNF 120

Query: 121 HRKDITTNDDNGESPPFILSNPPPTAQFVPYWRAPAGYLHVAPQRR----MLALPSP--- 180
           HRK++        +PP     PPP      ++R PA   +  P  +     LALP P   
Sbjct: 121 HRKELPYFH---HAPPQHQPPPPPPG----FYRLPAPVSYRPPPSQAPPLQLALPPPQRE 180

Query: 181 ----------SSGDGGCRKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIG 227
                     +   GG RKR RTKFT EQKE+ML +AE++ WRIQ+ D+  +  FC E G
Sbjct: 181 RSEDPMETSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETG 240

[Close]
BLAST of Cp4.1LG01g09000 vs. TrEMBL
Match: A0A067KBY6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18680 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.9e-59
Identity = 136/257 (52.92%), Postives = 160/257 (62.26%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPPPPLYK 60
           M+FED EE +E+ EM+ P +YD     T            R+  T S   +     P Y+
Sbjct: 1   MEFEDQEEHDEEEEMDLPASYDSLGNST------------RVKMTSSGAETGHSTKPRYR 60

Query: 61  ECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDI--TTN---DDN 120
           ECLKNHAV IGGH++DGCGEFMPAG  G+LDALKCAACNCHRNFHRK+   TTN      
Sbjct: 61  ECLKNHAVGIGGHAVDGCGEFMPAGAEGTLDALKCAACNCHRNFHRKETNETTNPGGGGG 120

Query: 121 GESPPFILSNPPP----TAQFVPYWRAPAGYLHVA-PQRRMLALPSPS------------ 180
           G    F   +P P      QF PY+R PAGYLHVA PQ+R LALPS S            
Sbjct: 121 GGGELFFHGHPHPHHLQVPQFTPYYRTPAGYLHVAPPQQRPLALPSTSGGQSREDQEDVS 180

Query: 181 --------SGDGGCRKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKR 228
                   SG G  RKR RTKFT++QKE+ML +AE+L WRIQK+DEA V +FCNE GVKR
Sbjct: 181 NPSGGGFGSGGGSSRKRFRTKFTQDQKERMLSLAERLGWRIQKHDEAVVQQFCNETGVKR 240

[Close]
BLAST of Cp4.1LG01g09000 vs. TrEMBL
Match: F6GZ63_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0199g00250 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.9e-55
Identity = 128/241 (53.11%), Postives = 154/241 (63.90%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPP-PPLY 60
           M+FED EE EE++ +  PT+YD     T            R+    S    +P P  P Y
Sbjct: 1   MEFEDQEEHEEEIGL--PTSYDSFGNST------------RVKMATSGGEGSPAPRKPRY 60

Query: 61  KECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDNGESP 120
           +ECLKNHAV+IGGH++DGCGEFM AG  G+LDALKCAACNCHRNFHRK++   +  GE  
Sbjct: 61  RECLKNHAVSIGGHAVDGCGEFMAAGAEGTLDALKCAACNCHRNFHRKEM---EGGGEG- 120

Query: 121 PFILSNPPPTAQFVPYWRAPAGYLHVAPQRRMLALPSPS-----------------SGDG 180
            F   + P   QF PY+R PAGYLHVA   R LALPS S                 SG G
Sbjct: 121 -FHHHHHPHQPQFSPYYRTPAGYLHVAAHHRPLALPSTSGGGGTHSRDDQEDVSNPSGAG 180

Query: 181 GCRKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKN 224
             +KR RTKFT+EQK+KM  +AE+L WRIQK+DEA V +FC+E GVKR VLKVWMHNNK+
Sbjct: 181 SSKKRFRTKFTQEQKDKMFGLAERLGWRIQKHDEAVVQQFCSETGVKRHVLKVWMHNNKH 222

[Close]
BLAST of Cp4.1LG01g09000 vs. TrEMBL
Match: A0A061DI98_THECC (ZF-HD homeobox protein, putative OS=Theobroma cacao GN=TCM_001008 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.2e-54
Identity = 129/237 (54.43%), Postives = 151/237 (63.71%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPPPPLYK 60
           MDFED EE+EE+M + AP+ YD     +        P    +  T   L       P Y+
Sbjct: 1   MDFEDQEEQEEEMGL-APS-YDSLANSSRVKMSGVEP--GSITPTGQQLQQQQQRKPRYR 60

Query: 61  ECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDNGESPP 120
           ECLKNHAV IGGH++DGCGEFM AG  G+LDALKCAACNCHRNFHRK+      N     
Sbjct: 61  ECLKNHAVGIGGHAVDGCGEFMAAGAEGTLDALKCAACNCHRNFHRKEPELGSPNSVPTT 120

Query: 121 FILSNPPPTAQFVPYWRAPAGYLHVAPQRRMLALPSPSSGDGG--------------CRK 180
            +  +     QF PY+RAPAGYLH+A Q+R LALPS S G GG               RK
Sbjct: 121 DLYLHHHQPPQFTPYFRAPAGYLHLAGQQRPLALPSTSGGGGGHSRDDQEDVSNQGSSRK 180

Query: 181 RVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNT 224
           R RTKFT+EQK+KML +AE L WRIQK+DEA V +FCNE GVKR VLKVWMHNNK+T
Sbjct: 181 RFRTKFTQEQKDKMLGLAESLGWRIQKHDEAVVQQFCNENGVKRHVLKVWMHNNKHT 233

[Close]
BLAST of Cp4.1LG01g09000 vs. TrEMBL
Match: A0A0A0KGP3_CUCSA (Zinc finger homeodomain protein 1 OS=Cucumis sativus GN=Csa_6G499130 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 4.2e-54
Identity = 133/259 (51.35%), Postives = 160/259 (61.78%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPPP--PL 60
           MDFED +E EE+    A  +YD  L        P      ++  T   + S+ P    P 
Sbjct: 1   MDFEDQDEHEEEEMDIAAASYDDSL--------PNSGTRLKIPTTTDQIMSSSPGQRKPK 60

Query: 61  YKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDN--- 120
           Y+ECLKNHAV IGGH++DGCGEF+ AG  G+LDALKCAACNCHRNFHRK+ T N+ N   
Sbjct: 61  YRECLKNHAVGIGGHALDGCGEFLAAGAEGTLDALKCAACNCHRNFHRKE-TDNNLNPAV 120

Query: 121 ----GESPPFILSNPPPTAQFVPYWRAPAGYLHVAPQRRMLALPS--------------- 180
               G   PF+L +P    QF PY+R PAGYLHVAP  R LALPS               
Sbjct: 121 GVGLGIGEPFLLPHP---GQFSPYYRTPAGYLHVAPHHRPLALPSTSGGGGTHSREEQED 180

Query: 181 ---PSSGDGGC-----RKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGV 228
              PS G GG      +KR RTKFT+EQK++ML +AE L WRIQK+DEA V +FCN+ GV
Sbjct: 181 MSNPSGGGGGGSSSFGKKRFRTKFTQEQKDRMLGLAETLGWRIQKHDEAVVQQFCNDTGV 240

[Close]
BLAST of Cp4.1LG01g09000 vs. TrEMBL
Match: A0A067FAZ1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026161mg PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 7.1e-54
Identity = 125/253 (49.41%), Postives = 153/253 (60.47%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPPPPLYK 60
           M+FEDHEE+EE+M +  P  YD  L  +          +       +   ++P     Y+
Sbjct: 1   MEFEDHEEQEEEMGL--PAGYDSSLGNSSQVR------MGSSGGQATAEAAHPGRKARYR 60

Query: 61  ECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTN-------- 120
           ECLKNHAV IGGH++DGCGEFM AG  G+LD LKCAACNCHRNFHRK++ ++        
Sbjct: 61  ECLKNHAVGIGGHALDGCGEFMAAGDEGTLDGLKCAACNCHRNFHRKEVDSSVVTPMAAG 120

Query: 121 ---DDNGESPPFILSNPPPTAQFVPYWRAPAGYLHVAPQRRMLALPSPSSG--------- 180
                 GE    +  +P    QF PY+R PAGYLHVA   R LALPS S G         
Sbjct: 121 VPAAGGGE----VFFHPSQVPQFTPYYRTPAGYLHVAAHHRPLALPSTSGGGHSREDQED 180

Query: 181 ------DGGCRKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKRRVLK 228
                  GG RKR RTKFT EQK++ML +AEKL WRIQK+DE  V +FCN+ GVKR VLK
Sbjct: 181 ASNLGGSGGSRKRFRTKFTPEQKDRMLELAEKLGWRIQKHDEEVVQQFCNDTGVKRHVLK 240

[Close]
BLAST of Cp4.1LG01g09000 vs. TAIR10
Match: AT4G24660.1 (AT4G24660.1 homeobox protein 22)

HSP 1 Score: 175.6 bits (444), Expect = 3.5e-44
Identity = 110/236 (46.61%), Postives = 135/236 (57.20%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPPPPLYK 60
           M+FED EE+ E   +  P  YD   L            + R     + +         Y+
Sbjct: 1   MNFEDQEEDMEMSGVNPPCGYDS--LSGEGATSSGGGGVGRSKGVGAKIR--------YR 60

Query: 61  ECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDNGESPP 120
           ECLKNHAV IGGH++DGC EFMP+G +G+LDALKCAAC CHRNFHRK+  +        P
Sbjct: 61  ECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRAHRVP 120

Query: 121 FILSNPPPTAQFVPYWRAPAGYLHV----APQRRMLAL-----PSPSSGDGGCRKRVRTK 180
              + PP   Q       P GYLH+    AP R   A       S  S  GG  KR RTK
Sbjct: 121 TYYNRPPQPHQ-------PPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFRTK 180

Query: 181 FTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNTFRKE 228
           FT EQKEKML  AE+L WRIQK+D+ AV +FC E GV+R+VLK+WMHNNKN+  K+
Sbjct: 181 FTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNSLGKK 219

[Close]
BLAST of Cp4.1LG01g09000 vs. TAIR10
Match: AT5G65410.1 (AT5G65410.1 homeobox protein 25)

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-41
Identity = 108/259 (41.70%), Postives = 142/259 (54.83%), Query Frame = 1 

Query: 1   MDFEDH-----EEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSP------- 60
           M+FED+     EE+EEDM +      D  +  +PP     P   +  ++T          
Sbjct: 1   MEFEDNNNNNDEEQEEDMNLHEEEEDDDAVYDSPPLSRVLPKASTESHETTGTTSTGGGG 60

Query: 61  ----LHSNPPPPPLYKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNF 120
               +H        ++ECLKN AV IGGH++DGCGEFMPAG  G++DALKCAAC CHRNF
Sbjct: 61  GFMVVHGGGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNF 120

Query: 121 HRKDITTNDDNGESPPFILSNPPPTAQFVPYWRAPAGYLHVAPQRR----MLALPSP--- 180
           HRK++        +PP     PPP      ++R PA   +  P  +     LALP P   
Sbjct: 121 HRKELPYFH---HAPPQHQPPPPPPG----FYRLPAPVSYRPPPSQAPPLQLALPPPQRE 180

Query: 181 ----------SSGDGGCRKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIG 227
                     +   GG RKR RTKFT EQKE+ML +AE++ WRIQ+ D+  +  FC E G
Sbjct: 181 RSEDPMETSSAEAGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETG 240

[Close]
BLAST of Cp4.1LG01g09000 vs. TAIR10
Match: AT2G02540.1 (AT2G02540.1 homeobox protein 21)

HSP 1 Score: 164.1 bits (414), Expect = 1.1e-40
Identity = 86/201 (42.79%), Postives = 116/201 (57.71%), Query Frame = 1 

Query: 59  YKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDNGES 118
           YKECLKNHA  +GG++IDGCGEFMP+G  GS++AL C+ CNCHRNFHR++    +    S
Sbjct: 87  YKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETEGEEKTFFS 146

Query: 119 PPFILSNPPPTAQFVPYW----RAPAGYLHVAPQRRMLALPSPSSGD------GGC---- 178
           P      PPP  + + +     ++P     + P     A  +  S D      GG     
Sbjct: 147 PYLNHHQPPPQQRKLMFHHKMIKSPLPQQMIMPIGVTTAGSNSESEDLMEEEGGGSLTFR 206

Query: 179 ---------------RKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVK 231
                          +KR RTKFT+EQKEKM+  AE++ W+IQ+ +E+ V + C EIG++
Sbjct: 207 QPPPPPSPYSYGHNQKKRFRTKFTQEQKEKMISFAERVGWKIQRQEESVVQQLCQEIGIR 266

[Close]
BLAST of Cp4.1LG01g09000 vs. TAIR10
Match: AT1G69600.1 (AT1G69600.1 zinc finger homeodomain 1)

HSP 1 Score: 159.1 bits (401), Expect = 3.4e-39
Identity = 88/185 (47.57%), Postives = 106/185 (57.30%), Query Frame = 1 

Query: 59  YKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLD--ALKCAACNCHRNFHRKDITTNDDNG 118
           YKECLKNHA  +GGH++DGCGEFMP+    S D  +L+CAAC CHRNFHR+D + N +  
Sbjct: 31  YKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRDPSENLNFL 90

Query: 119 ESPPFI----LSNPPPTAQFVPYWRAPAGYLHVAPQRRML-----ALPSPSSGD------ 178
            +PP        +PP      P    P  Y   AP   ++       P PS  D      
Sbjct: 91  TAPPISSPSGTESPPSRHVSSP---VPCSYYTSAPPHHVILSLSSGFPGPSDQDPTVVRS 150

Query: 179 -----GGCRKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVW 222
                G  RKR RTKFT EQK KM   AEK  W+I   DE +V EFCNE+G++R VLKVW
Sbjct: 151 ENSSRGAMRKRTRTKFTPEQKIKMRAFAEKAGWKINGCDEKSVREFCNEVGIERGVLKVW 210

[Close]
BLAST of Cp4.1LG01g09000 vs. TAIR10
Match: AT1G75240.1 (AT1G75240.1 homeobox protein 33)

HSP 1 Score: 151.0 bits (380), Expect = 9.2e-37
Identity = 98/247 (39.68%), Postives = 126/247 (51.01%), Query Frame = 1 

Query: 43  NKTPSPLHSNPPPPPL--YKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNC 102
           +K+PS    +    P   Y+ECLKNHA ++GG   DGCGEFMP+G  G+++AL+CAAC+C
Sbjct: 58  SKSPSSFSISAAAKPTVRYRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDC 117

Query: 103 HRNFHRKDITTNDDNGES-------------------------PPFILSNP---PPTAQF 162
           HRNFHRK++   D  G S                         PP ++ NP   PP   +
Sbjct: 118 HRNFHRKEM---DGVGSSDLISHHRHHHYHHNQYGGGGGRRPPPPNMMLNPLMLPPPPNY 177

Query: 163 VP-----YWRAPAG------YLHVA---------PQRRMLALPSPSSGDG---------- 222
            P     Y  +P G       + VA              L L   SSG+G          
Sbjct: 178 QPIHHHKYGMSPPGGGGMVTPMSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAGQMAF 237

Query: 223 ---GCRKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHN 227
                +KR RTKFT +QKE+M+  AEKL WR+ K DE  +  FC EIGVKR+V KVWMHN
Sbjct: 238 SMSSSKKRFRTKFTTDQKERMMDFAEKLGWRMNKQDEEELKRFCGEIGVKRQVFKVWMHN 297

[Close]
BLAST of Cp4.1LG01g09000 vs. NCBI nr
Match: gi|802673721|ref|XP_012081639.1| (PREDICTED: zinc-finger homeodomain protein 2-like [Jatropha curcas])

HSP 1 Score: 237.3 bits (604), Expect = 2.8e-59
Identity = 136/257 (52.92%), Postives = 160/257 (62.26%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPPPPLYK 60
           M+FED EE +E+ EM+ P +YD     T            R+  T S   +     P Y+
Sbjct: 1   MEFEDQEEHDEEEEMDLPASYDSLGNST------------RVKMTSSGAETGHSTKPRYR 60

Query: 61  ECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDI--TTN---DDN 120
           ECLKNHAV IGGH++DGCGEFMPAG  G+LDALKCAACNCHRNFHRK+   TTN      
Sbjct: 61  ECLKNHAVGIGGHAVDGCGEFMPAGAEGTLDALKCAACNCHRNFHRKETNETTNPGGGGG 120

Query: 121 GESPPFILSNPPP----TAQFVPYWRAPAGYLHVA-PQRRMLALPSPS------------ 180
           G    F   +P P      QF PY+R PAGYLHVA PQ+R LALPS S            
Sbjct: 121 GGGELFFHGHPHPHHLQVPQFTPYYRTPAGYLHVAPPQQRPLALPSTSGGQSREDQEDVS 180

Query: 181 --------SGDGGCRKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKR 228
                   SG G  RKR RTKFT++QKE+ML +AE+L WRIQK+DEA V +FCNE GVKR
Sbjct: 181 NPSGGGFGSGGGSSRKRFRTKFTQDQKERMLSLAERLGWRIQKHDEAVVQQFCNETGVKR 240

[Close]
BLAST of Cp4.1LG01g09000 vs. NCBI nr
Match: gi|359495681|ref|XP_003635057.1| (PREDICTED: zinc-finger homeodomain protein 2-like [Vitis vinifera])

HSP 1 Score: 223.4 bits (568), Expect = 4.1e-55
Identity = 128/241 (53.11%), Postives = 154/241 (63.90%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPP-PPLY 60
           M+FED EE EE++ +  PT+YD     T            R+    S    +P P  P Y
Sbjct: 1   MEFEDQEEHEEEIGL--PTSYDSFGNST------------RVKMATSGGEGSPAPRKPRY 60

Query: 61  KECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDNGESP 120
           +ECLKNHAV+IGGH++DGCGEFM AG  G+LDALKCAACNCHRNFHRK++   +  GE  
Sbjct: 61  RECLKNHAVSIGGHAVDGCGEFMAAGAEGTLDALKCAACNCHRNFHRKEM---EGGGEG- 120

Query: 121 PFILSNPPPTAQFVPYWRAPAGYLHVAPQRRMLALPSPS-----------------SGDG 180
            F   + P   QF PY+R PAGYLHVA   R LALPS S                 SG G
Sbjct: 121 -FHHHHHPHQPQFSPYYRTPAGYLHVAAHHRPLALPSTSGGGGTHSRDDQEDVSNPSGAG 180

Query: 181 GCRKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKN 224
             +KR RTKFT+EQK+KM  +AE+L WRIQK+DEA V +FC+E GVKR VLKVWMHNNK+
Sbjct: 181 SSKKRFRTKFTQEQKDKMFGLAERLGWRIQKHDEAVVQQFCSETGVKRHVLKVWMHNNKH 222

[Close]
BLAST of Cp4.1LG01g09000 vs. NCBI nr
Match: gi|659080015|ref|XP_008440565.1| (PREDICTED: zinc-finger homeodomain protein 1-like [Cucumis melo])

HSP 1 Score: 222.2 bits (565), Expect = 9.2e-55
Identity = 137/260 (52.69%), Postives = 164/260 (63.08%), Query Frame = 1 

Query: 1   MDFEDHEE-EEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPPP--P 60
           MDFED EE EEE+M+M A  +YD  L        P      ++  T   + S+ P    P
Sbjct: 1   MDFEDQEEHEEEEMDMAA-ASYDDSL--------PNSGTRLKIPTTADQIISSSPGQRKP 60

Query: 61  LYKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDN-- 120
            Y+ECLKNHAV IGGH++DGCGEF+ AG  G+LDALKCAACNCHRNFHRK+ T N+ N  
Sbjct: 61  KYRECLKNHAVGIGGHALDGCGEFLAAGAEGTLDALKCAACNCHRNFHRKE-TDNNLNPA 120

Query: 121 -----GESPPFILSNPPPTAQFVPYWRAPAGYLHVAPQRRMLALPS-------------- 180
                G   PF+L +P    QF PY+R PAGYLHVAP  R LALPS              
Sbjct: 121 VGVGLGIGEPFLLPHP---GQFSPYYRTPAGYLHVAPHHRPLALPSTSGGGGTHSREEQE 180

Query: 181 ----PSSGDGGC-----RKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIG 228
               PS G GG      +KR RTKFT+EQK++ML +AE L WRIQK+DEA V +FCN+ G
Sbjct: 181 DMSNPSGGGGGGSSSFGKKRFRTKFTQEQKDRMLGLAETLGWRIQKHDEAVVQQFCNDTG 240

[Close]
BLAST of Cp4.1LG01g09000 vs. NCBI nr
Match: gi|590706789|ref|XP_007047820.1| (ZF-HD homeobox protein, putative [Theobroma cacao])

HSP 1 Score: 219.9 bits (559), Expect = 4.6e-54
Identity = 129/237 (54.43%), Postives = 151/237 (63.71%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPPPPLYK 60
           MDFED EE+EE+M + AP+ YD     +        P    +  T   L       P Y+
Sbjct: 1   MDFEDQEEQEEEMGL-APS-YDSLANSSRVKMSGVEP--GSITPTGQQLQQQQQRKPRYR 60

Query: 61  ECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDNGESPP 120
           ECLKNHAV IGGH++DGCGEFM AG  G+LDALKCAACNCHRNFHRK+      N     
Sbjct: 61  ECLKNHAVGIGGHAVDGCGEFMAAGAEGTLDALKCAACNCHRNFHRKEPELGSPNSVPTT 120

Query: 121 FILSNPPPTAQFVPYWRAPAGYLHVAPQRRMLALPSPSSGDGG--------------CRK 180
            +  +     QF PY+RAPAGYLH+A Q+R LALPS S G GG               RK
Sbjct: 121 DLYLHHHQPPQFTPYFRAPAGYLHLAGQQRPLALPSTSGGGGGHSRDDQEDVSNQGSSRK 180

Query: 181 RVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGVKRRVLKVWMHNNKNT 224
           R RTKFT+EQK+KML +AE L WRIQK+DEA V +FCNE GVKR VLKVWMHNNK+T
Sbjct: 181 RFRTKFTQEQKDKMLGLAESLGWRIQKHDEAVVQQFCNENGVKRHVLKVWMHNNKHT 233

[Close]
BLAST of Cp4.1LG01g09000 vs. NCBI nr
Match: gi|449451399|ref|XP_004143449.1| (PREDICTED: zinc-finger homeodomain protein 1-like [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 6.0e-54
Identity = 133/259 (51.35%), Postives = 160/259 (61.78%), Query Frame = 1 

Query: 1   MDFEDHEEEEEDMEMEAPTNYDKPLLQTPPPPPPPPPPLSRLNKTPSPLHSNPPPP--PL 60
           MDFED +E EE+    A  +YD  L        P      ++  T   + S+ P    P 
Sbjct: 1   MDFEDQDEHEEEEMDIAAASYDDSL--------PNSGTRLKIPTTTDQIMSSSPGQRKPK 60

Query: 61  YKECLKNHAVAIGGHSIDGCGEFMPAGPNGSLDALKCAACNCHRNFHRKDITTNDDN--- 120
           Y+ECLKNHAV IGGH++DGCGEF+ AG  G+LDALKCAACNCHRNFHRK+ T N+ N   
Sbjct: 61  YRECLKNHAVGIGGHALDGCGEFLAAGAEGTLDALKCAACNCHRNFHRKE-TDNNLNPAV 120

Query: 121 ----GESPPFILSNPPPTAQFVPYWRAPAGYLHVAPQRRMLALPS--------------- 180
               G   PF+L +P    QF PY+R PAGYLHVAP  R LALPS               
Sbjct: 121 GVGLGIGEPFLLPHP---GQFSPYYRTPAGYLHVAPHHRPLALPSTSGGGGTHSREEQED 180

Query: 181 ---PSSGDGGC-----RKRVRTKFTEEQKEKMLVMAEKLDWRIQKNDEAAVMEFCNEIGV 228
              PS G GG      +KR RTKFT+EQK++ML +AE L WRIQK+DEA V +FCN+ GV
Sbjct: 181 MSNPSGGGGGGSSSFGKKRFRTKFTQEQKDRMLGLAETLGWRIQKHDEAVVQQFCNDTGV 240

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g09000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZHD1_ORYSJ1.7e-4844.21Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. japonica GN=ZHD1 PE=2 S... [more]
ZHD1_ORYSI2.2e-4844.21Zinc-finger homeodomain protein 1 OS=Oryza sativa subsp. indica GN=ZHD1 PE=3 SV=... [more]
ZHD2_ARATH6.2e-4346.61Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1[more]
ZHD3_ORYSJ9.9e-4143.84Zinc-finger homeodomain protein 3 OS=Oryza sativa subsp. japonica GN=ZHD3 PE=3 S... [more]
ZHD1_ARATH2.9e-4041.70Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana GN=ZHD1 PE=1 SV=1[more]
BLAST of Cp4.1LG01g09000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067KBY6_JATCU1.9e-5952.92Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18680 PE=4 SV=1[more]
F6GZ63_VITVI2.9e-5553.11Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0199g00250 PE=4 SV=... [more]
A0A061DI98_THECC3.2e-5454.43ZF-HD homeobox protein, putative OS=Theobroma cacao GN=TCM_001008 PE=4 SV=1[more]
A0A0A0KGP3_CUCSA4.2e-5451.35Zinc finger homeodomain protein 1 OS=Cucumis sativus GN=Csa_6G499130 PE=4 SV=1[more]
A0A067FAZ1_CITSI7.1e-5449.41Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026161mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g09000 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24660.13.5e-4446.61 homeobox protein 22[more]
AT5G65410.11.6e-4141.70 homeobox protein 25[more]
AT2G02540.11.1e-4042.79 homeobox protein 21[more]
AT1G69600.13.4e-3947.57 zinc finger homeodomain 1[more]
AT1G75240.19.2e-3739.68 homeobox protein 33[more]
BLAST of Cp4.1LG01g09000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|802673721|ref|XP_012081639.1|2.8e-5952.92PREDICTED: zinc-finger homeodomain protein 2-like [Jatropha curcas][more]
gi|359495681|ref|XP_003635057.1|4.1e-5553.11PREDICTED: zinc-finger homeodomain protein 2-like [Vitis vinifera][more]
gi|659080015|ref|XP_008440565.1|9.2e-5552.69PREDICTED: zinc-finger homeodomain protein 1-like [Cucumis melo][more]
gi|590706789|ref|XP_007047820.1|4.6e-5454.43ZF-HD homeobox protein, putative [Theobroma cacao][more]
gi|449451399|ref|XP_004143449.1|6.0e-5451.35PREDICTED: zinc-finger homeodomain protein 1-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR006456ZF_HD_homeobox_Cys/His_dimer
IPR006455Homeodomain_ZF_HD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g09000.1Cp4.1LG01g09000.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006455Homeodomain, ZF-HD classTIGRFAMsTIGR01565TIGR01565coord: 165..222
score: 7.9
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPRODOMPD125774coord: 59..108
score: 2.0
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 58..108
score: 2.1
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMsTIGR01566TIGR01566coord: 59..108
score: 2.6
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROFILEPS51523ZF_HD_DIMERcoord: 59..108
score: 27
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 157..227
score: 1.1
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 156..226
score: 2.72
NoneNo IPR availablePANTHERPTHR31948FAMILY NOT NAMEDcoord: 1..230
score: 3.6
NoneNo IPR availablePANTHERPTHR31948:SF20ZINC-FINGER HOMEODOMAIN PROTEIN 1coord: 1..230
score: 3.6
NoneNo IPR availableunknownSSF101447Formin homology 2 domain (FH2 domain)coord: 30..104
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g09000Cucsa.104100Cucumber (Gy14) v1cgycpeB0219
Cp4.1LG01g09000CmaCh04G008370Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g09000CmaCh07G005620Cucurbita maxima (Rimu)cmacpeB876
Cp4.1LG01g09000CmoCh07G005690Cucurbita moschata (Rifu)cmocpeB813
Cp4.1LG01g09000Cla004862Watermelon (97103) v1cpewmB383
Cp4.1LG01g09000MELO3C007727Melon (DHL92) v3.5.1cpemeB434
Cp4.1LG01g09000ClCG10G008590Watermelon (Charleston Gray)cpewcgB349
Cp4.1LG01g09000Lsi01G008000Bottle gourd (USVL1VR-Ls)cpelsiB326
Cp4.1LG01g09000Lsi05G008250Bottle gourd (USVL1VR-Ls)cpelsiB370
Cp4.1LG01g09000Bhi11G000704Wax gourdcpewgoB0478
Cp4.1LG01g09000CsGy6G029390Cucumber (Gy14) v2cgybcpeB808
Cp4.1LG01g09000Carg14238Silver-seed gourdcarcpeB1302
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g09000Cp4.1LG19g09980Cucurbita pepo (Zucchini)cpecpeB385
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g09000Wax gourdcpewgoB0486
Cp4.1LG01g09000Cucurbita pepo (Zucchini)cpecpeB073
Cp4.1LG01g09000Cucurbita pepo (Zucchini)cpecpeB233
Cp4.1LG01g09000Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g09000Cucurbita moschata (Rifu)cmocpeB312
Cp4.1LG01g09000Cucurbita moschata (Rifu)cmocpeB613
Cp4.1LG01g09000Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g09000Wild cucumber (PI 183967)cpecpiB401
Cp4.1LG01g09000Wild cucumber (PI 183967)cpecpiB468
Cp4.1LG01g09000Cucumber (Chinese Long) v2cpecuB404
Cp4.1LG01g09000Cucumber (Chinese Long) v2cpecuB469
Cp4.1LG01g09000Watermelon (Charleston Gray)cpewcgB374
Cp4.1LG01g09000Watermelon (97103) v1cpewmB443
Cp4.1LG01g09000Melon (DHL92) v3.5.1cpemeB421
Cp4.1LG01g09000Cucumber (Gy14) v2cgybcpeB506
Cp4.1LG01g09000Melon (DHL92) v3.6.1cpemedB493
Cp4.1LG01g09000Melon (DHL92) v3.6.1cpemedB509
Cp4.1LG01g09000Silver-seed gourdcarcpeB0562
Cp4.1LG01g09000Silver-seed gourdcarcpeB1417
Cp4.1LG01g09000Cucumber (Chinese Long) v3cpecucB0501
Cp4.1LG01g09000Cucumber (Chinese Long) v3cpecucB0581