Cp4.1LG01g08920 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g08920
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description1-deoxy-D-xylulose-5-phosphate synthase
LocationCp4.1LG01 : 4615478 .. 4620162 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTATGTAAAAAAAAAACAATACTGTGTGTACATGTAAAAAAAAACAATACTGTGTGCATGTAAAAAAAACAATACAAAATTCAAACATATATATACTATATTTAATTGTTCCAAACAAAAATTAGATGACATTATCTACTAAAGTAGAGCTTAGAACATAATATAATAAAAAGTAATAAATTGATATAATAAAAAGTAATAAATAGATAATTTGTAGATTATTGGTTTAAAGAGGCTTTGGCCTAGAAAGGTAAACCTCTATAACATTAGGTAGAGGGTAATACACTCTTGTTTGGAAGGTTATCGGGGTAAATTTTGTCGAGGTTCCAATCGATTTCACATTAAATGTGAAGTAATACATAGCGCCACAGGCTCCCGAATAATTCGCCTTCACGGTGTCTACAACTTCAAAATTAGTTCCCTATTAACAGGAGATAAAAAGAAACTTTAGAAGAATGAAAGACAAATTCTTTTTCCATAGAAGACAAAACGGGACAATTGCATTTTCGTTGTTGTTGGATGATGGAAGTCCCACATCGGCTAATTTAGGGAATGATCATGGGTTTATAAATGAGGAATACTAACTCCATTGATATGAGGCCTTTTGGGAAGCCCAAAGCAAAGCCATGAGAGCTCATGCTCAAAGTGGACAATATCATACGTGGAGAGTCGTGTTCGTCTGACATGGTATCAGAGCCATGCCCAAAAGACGAAATCGATGATCATGGGTATAAGTGAGGAATACTAAAAAGACGAAATCTAAATCGAAGGCTCCCAAAAGACGAAGGTATAAGTGAGGAATACTAAAAAGACGAAATCTAAATCGAAAACAAACATGACGAGTAGGGAATGATCAAATTTTGTTTGTTAATTAGACTGGACTGACGATCCAGAACGACCCCCTCTGTGACTGTACAGCTCTCAAACGCTCCTCTACCTCGACCAGCAGCCAGCCTGAGAAAAATAAAGGAGAACGAGATGAGTATAAAAATGCCACCTACTTGTAGGCTCTCTTCGCATCTTAATTTAACAGAACTCCCACGGTTTCCTAGTTCGGTTCTAGGACATCGGGTTCTAACCTTAGTCTCTTGGGGCTTGCCCCTTGGGTTTCACCGGTTCATCGTCCTTTTATTAGTCACCTAGAGGTGGGTTCTAACCTTAGTCTCTTGGGGCTTGCCCCTTGGGTTTCACCGTTCATCGTCCTTTTATTAGTCACCTAGAGGTTCCTTATGCCAAGCTGATATGGTCGGTATCTCTCTATGAGGCGCTATCTCTACATGGTTATCTAGGACTACATGGTATCTAGCCTAGGGGTGTGCTGACTACCCCTACGCCCATATAGTCCTCCTATGGGGGGCGCGACCAAACCCGTTCCCATGCAGCTAATGGGCTGTACGACGTGGGGACTCATTTCCCATGCGAAATGGCTAAGAGTAGTAAAGACTGATCAGGGACCCTTGGTCCTCCCATAAAGCTATAGATATCATTCTCACGCTAGCAATCTATGAACACTCCTATGTACTTTCTTGCCATGGTGAACCGCTAAGTTCCTAGGGGAAAATTAAGTCTGGCTGGAGCGACATATCGCTCCTAACAGTAATTCTCTAAGCTTATCCTAGAAATGGGCACTAGAAAATAATGGGGTGTGCATGCAACCGCCTTCTAACATCCTAATATTCATGCAAACTAGGCACGCCGGCTCAACGAGGCGATGGCCTCCATCCAGCACCCAAAACACGAAGTTCGCGCTCAATGGGGCGAATTCATCCATCGAGCACCCGGAACACGGAATACACAATTCCAACATAAATTAAACGCATGCATACGTACAACGGAAGCTTAAGGCATACAAGCAACACTCAGATAATTCACCCAACACATCATAACAATCCATCTAATTAATCTCATTCATGGAGAGCTAATTTAAGGCAAAATTACTAACATGCATACATACAATCCAAGCGAACCCTACAAGTATTTCTTCCTAAATACCGGGTGGTGACTTACCTGGTTGACGCGTGCCCTTTTTGCTAGCGTTTCTTTGCCCGTGAAGTGTCCAAAAGTACTTATTTCTTTAAATTAGGTCCCTATTCACGTAAGAACAGTATTAGAACTGGAACCGGGACAAAAATCGGGCAAACAGAAAACAACCGGGCCAAATTGGCCGTTCCACGCGCTCTCACTGTAACTAATGAAGAATCTCTCATTACAGGTAACACTCTCGGTTGTTGGATTCTGCCAATTAGGAGATTTCTGCCATTTGTTCTTGTTTCTCATTGTACTTTGAGATGTTGTATTCTCTGTATCCAAAACTGGAGGACATTTAAGTGCAAGCTTAGGTGTAGTGGAGTTAGCAGTGGCGCTCCATTATGTGTTCAACACCCCAGAGGACAAAATCATATGGGATGTCGGTCACCAGGTGCATAACCAACAAAATTCGACAAAAATGAGCTTTTTTCTTTCTAGAGTTAGAGTTGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAGGCATAACTCTAGAATGCATACTCTTAAGGCAAACTTCAGGGCTTGCTGGTTTTCCGAAAAGAGACGAGAGTGTTCATGATGCTTTTGGTGCAGGACACAGTTCTACAAGCATATCAGCTGCTCTTGGTATGGCTGTTGCAAGAGAGCTTTTGGGAAGAAGAACAGTGTCATTTCTGTGATTGGTGATAGAGCTATGACAGCAGGTCAAGCGTACGAGGCGATGAATAATGCAGGCTATCTGGATAAGAACATGATCATTATTCTCAACGACAACAACCAAGTCTCATTGCCAACCGCTACGTTAGATGGCCCTGCTACTCTTGTTGGAGCACTCAGTAGTGCCTTAACTAAGCTTAAAGCAAGCACCAAATTTCGAAAGCTTCGTGAAGCTGCAAAGGTAAAACATTAGAGGATCGCACACGCTTACACATTTCGAAAGCTTTGGACACTCATCAGACTTTCATACTACTTTTTACAGAGCATCACAAGAAAAATTGGAGGCAAGCTCACGGAGTTGCTGTAAAAGTTAATGAATATGCAAGAGGTATGATAAGTGGCTCGGGGTCGATTTTTTTCGAGGAGCTTGGCCTGTACTACATTGGTCCTACGGATGGACACAATTTGGAAGATTTGTTCACCATTTTGGATAAGGTGAAATCGATGTCAACCCCTAGACCAGTATTGATCCACATCATTACAAAAAAAGAGAAGGGTTATCAAACGGTAGAAACAGCTGCAGATAAAATGTATGGTTAGTCTCTGTTATGAATGAACACCCTTTTTTATTCATGAACTCTTTCAAACACTTGATTCTTTACAACTTTTACACTTTCCACACTTTCCCACACTTTTGGAGTTGTCTCTGTTATGAATGAAGACCATTTTGTCTTTTACACTTTCCACACTTTCCCACACTTTTGGAGTTGTCTCTGTTATGAATGAAGACCATTTTGTTAGTCTCTGTTATGAATGAACACCAAATCACGTTTGACCCAAAATAAGCAAGCAATTCAAGGCAAAATGTCCCACACTTTCCTACACTCAATACTTTGCTGAGTCTCTGATAAAAGAAGCCGAAGTGGATAACAACATTGTGGTCACCGACGCTGTCATGGGTGGTGGAACTAGTCTTAACCATTTCCAGAAGAGATTCTCAAATCATTGCTTTGATGTGAGGATTGCTGAGCAACACGCTGTTACGTTTGCAGCTGGTTTAGCAACAGAGGGTGTTAAGCCATTTTGTGTCATATACTCATCCTTCCTTCAAAAAGGGTTTGATGGGGTGAAAGTTGTGAAAAAGATTAAGTTCAGTTGACAATGTTGTGTTTGCCTTGTTACTAACTTATATGCGGAATGGTCATCAAGGTGGTGCATGATGTAGATCTTTAGAAACTCCCTGTCCGATTTGCAATGGATCGAGCTGGTTTGGTTGGTGCGGATGGCCCGACACATTGTGGAACATTTGATATAACATACATGGCTTGTTTGTCGAACATGGTGGTCATGGCTCCATCTGATGAAGCTGAACTAATGCACATGGTTGCAACTGCAGCAGCCATCGACGATAGACCGAGTTGTTTTTGGTTTCCAAAAGGCAATGAGATCGGAGTCGTTCTTCTACTTGACAACAAAGGAACTCCAATAGAGGTTAGCATTGAAGAAGTTAGAAAACACTGTCAAGTAAAAGTATAAGGTTCAATGGTTCAACAATGTGTTGGAGCTTCAGAATTGCTGAAAACAAGAGGCATTGCCCCAGCAGTAGCAGATGCCAGATTTTGCAAACCTCTCGACGCTGAGCTTATTATTTAATTGGCAAAGGAACATGAAATTATGATGACTGTGGAGGAAGGTTCCATTGGAGGCTTTGGTTATGATGTATCTTATTTCCTATGCTTAACTAGAATTTTGGATGAACATGGTCTCAAGGTAATTCCATATAATAATACTCTCTTTCTCCACCCATAATGTTGTAATGGTATTGGTTGGTTGTGTTTGCAGTTGAGAACTATTGTTCTTCCGGATCGATACATCAATCATGGATTGCCACAAAGACACATAGCTGCCACGGTCTTAACTCTCTTGGGAAGATCAACAGAAGGTTTTTCAATCCAAGTTTCTATTGCTACCAATCCAGATCTATTGAAGAAACTATGTAACCTATAG

mRNA sequence

ATGTTTATATGTTGTATTCTCTGTATCCAAAACTGGAGGACATTTAAGTGCAAGCTTAGGTGTAGTGGAGTTAGCAGTGGCGCTCCATTATGTGTTCAACACCCCAGAGGACAAAATCATATGGGATGTCGGTCACCAGGCATAACTCTAGAATGCATACTCTTAAGGCAAACTTCAGGGCTTGCTGGTTTTCCGAAAAGAGACGAGAGTGTTCATGATGCTTTTGGTGCAGGACACAGTTCTACAAGCATATCAGCTGCTCTTGGTATGGCTGTTGCAAGAGAGCTTTTGGGAAGAAGAACAGTGTCATTTCTAGCTATGACAGCAGGTCAAGCGTACGAGGCGATGAATAATGCAGGCTATCTGGATAAGAACATGATCATTATTCTCAACGACAACAACCAAGTCTCATTGCCAACCGCTACGTTAGATGGCCCTGCTACTCTTGTTGGAGCACTCAGTAGTGCCTTAACTAAGCTTAAAGCAAGCACCAAATTTCGAAAGCTTCGTGAAGCTGCAAAGGATCGCACACGCTTACACATTTCGAAAGCTTTGGACACTCATCAGACTTTCATACTACTTTTTACAGAGCATCACAAGAAAAATTGGAGGCAAGCTCACGGAGTTGCTGTAAAAGTTAATGAATATGCAAGAGGTATGATAAGTGGCTCGGGGTCGATTTTTTTCGAGGAGCTTGGCCTGTACTACATTGGTCCTACGGATGGACACAATTTGGAAGATTTGTTCACCATTTTGGATAAGGTGAAATCGATGTCAACCCCTAGACCAGTATTGATCCACATCATTACAAAAAAAGAGAAGGGTTATCAAACGGTAGAAACAGCTGCAGATAAAATCAAGCAATTCAAGGCAAAATGTCCCACACTTTCCTACACTCAATACTTTGCTGAGTCTCTGATAAAAGAAGCCGAAGTGGATAACAACATTGTGGTCACCGACGCTGTCATGGGTGGTGGAACTAGTCTTAACCATTTCCAGAAGAGATTCTCAAATCATTGCTTTGATGTGAGGATTGCTGAGCAACACGCTGTTACGTTTGCAGCTGGTTTAGCAACAGAGGGTGTTAAGCCATTTTGTGTCATATACTCATCCTTCCTTCAAAAAGGGTTTGATGGGAAACTCCCTGTCCGATTTGCAATGGATCGAGCTGGTTTGGTTGGTGCGGATGGCCCGACACATTGTGGAACATTTGATATAACATACATGGCTTGTTTGTCGAACATGGTGGTCATGGCTCCATCTGATGAAGCTGAACTAATGCACATGGTTGCAACTGCAGCAGCCATCGACGATAGACCGAGTTGTTTTTGGTTTCCAAAAGGCAATGAGATCGGAGTCGTTCTTCTACTTGACAACAAAGGAACTCCAATAGAGGTTAGCATTGAAGAAGTTAGAAAACACTGTCAAGAACATGAAATTATGATGACTGTGGAGGAAGGTTCCATTGGAGGCTTTGGTTATGATGTATCTTATTTCCTATGCTTAACTAGAATTTTGGATGAACATGGTCTCAAGTTGAGAACTATTGTTCTTCCGGATCGATACATCAATCATGGATTGCCACAAAGACACATAGCTGCCACGGTCTTAACTCTCTTGGGAAGATCAACAGAAGGTTTTTCAATCCAAGTTTCTATTGCTACCAATCCAGATCTATTGAAGAAACTATGTAACCTATAG

Coding sequence (CDS)

ATGTTTATATGTTGTATTCTCTGTATCCAAAACTGGAGGACATTTAAGTGCAAGCTTAGGTGTAGTGGAGTTAGCAGTGGCGCTCCATTATGTGTTCAACACCCCAGAGGACAAAATCATATGGGATGTCGGTCACCAGGCATAACTCTAGAATGCATACTCTTAAGGCAAACTTCAGGGCTTGCTGGTTTTCCGAAAAGAGACGAGAGTGTTCATGATGCTTTTGGTGCAGGACACAGTTCTACAAGCATATCAGCTGCTCTTGGTATGGCTGTTGCAAGAGAGCTTTTGGGAAGAAGAACAGTGTCATTTCTAGCTATGACAGCAGGTCAAGCGTACGAGGCGATGAATAATGCAGGCTATCTGGATAAGAACATGATCATTATTCTCAACGACAACAACCAAGTCTCATTGCCAACCGCTACGTTAGATGGCCCTGCTACTCTTGTTGGAGCACTCAGTAGTGCCTTAACTAAGCTTAAAGCAAGCACCAAATTTCGAAAGCTTCGTGAAGCTGCAAAGGATCGCACACGCTTACACATTTCGAAAGCTTTGGACACTCATCAGACTTTCATACTACTTTTTACAGAGCATCACAAGAAAAATTGGAGGCAAGCTCACGGAGTTGCTGTAAAAGTTAATGAATATGCAAGAGGTATGATAAGTGGCTCGGGGTCGATTTTTTTCGAGGAGCTTGGCCTGTACTACATTGGTCCTACGGATGGACACAATTTGGAAGATTTGTTCACCATTTTGGATAAGGTGAAATCGATGTCAACCCCTAGACCAGTATTGATCCACATCATTACAAAAAAAGAGAAGGGTTATCAAACGGTAGAAACAGCTGCAGATAAAATCAAGCAATTCAAGGCAAAATGTCCCACACTTTCCTACACTCAATACTTTGCTGAGTCTCTGATAAAAGAAGCCGAAGTGGATAACAACATTGTGGTCACCGACGCTGTCATGGGTGGTGGAACTAGTCTTAACCATTTCCAGAAGAGATTCTCAAATCATTGCTTTGATGTGAGGATTGCTGAGCAACACGCTGTTACGTTTGCAGCTGGTTTAGCAACAGAGGGTGTTAAGCCATTTTGTGTCATATACTCATCCTTCCTTCAAAAAGGGTTTGATGGGAAACTCCCTGTCCGATTTGCAATGGATCGAGCTGGTTTGGTTGGTGCGGATGGCCCGACACATTGTGGAACATTTGATATAACATACATGGCTTGTTTGTCGAACATGGTGGTCATGGCTCCATCTGATGAAGCTGAACTAATGCACATGGTTGCAACTGCAGCAGCCATCGACGATAGACCGAGTTGTTTTTGGTTTCCAAAAGGCAATGAGATCGGAGTCGTTCTTCTACTTGACAACAAAGGAACTCCAATAGAGGTTAGCATTGAAGAAGTTAGAAAACACTGTCAAGAACATGAAATTATGATGACTGTGGAGGAAGGTTCCATTGGAGGCTTTGGTTATGATGTATCTTATTTCCTATGCTTAACTAGAATTTTGGATGAACATGGTCTCAAGTTGAGAACTATTGTTCTTCCGGATCGATACATCAATCATGGATTGCCACAAAGACACATAGCTGCCACGGTCTTAACTCTCTTGGGAAGATCAACAGAAGGTTTTTCAATCCAAGTTTCTATTGCTACCAATCCAGATCTATTGAAGAAACTATGTAACCTATAG

Protein sequence

MFICCILCIQNWRTFKCKLRCSGVSSGAPLCVQHPRGQNHMGCRSPGITLECILLRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRTVSFLAMTAGQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKLREAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFFEELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKIKQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSNHCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDGKLPVRFAMDRAGLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNEIGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHGLKLRTIVLPDRYINHGLPQRHIAATVLTLLGRSTEGFSIQVSIATNPDLLKKLCNL
Homology
[Close]
BLAST of Cp4.1LG01g08920 vs. Swiss-Prot
Match: DXS2_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0190000 PE=2 SV=1)

HSP 1 Score: 566.2 bits (1458), Expect = 3.9e-160
Identity = 302/481 (62.79%), Postives = 352/481 (73.18%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT--VSFL---AMTA 114
           +RQTSGLAGFPKRDES HDAFGAGHSSTSISAALGMAVAR+LLG++   +S +   AMTA
Sbjct: 158 IRQTSGLAGFPKRDESAHDAFGAGHSSTSISAALGMAVARDLLGKKNHVISVIGDGAMTA 217

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNN+GYLD NMI++LNDN QVSLPTATLDGPAT VGALS ALTKL++STK R+L
Sbjct: 218 GQAYEAMNNSGYLDSNMIVVLNDNKQVSLPTATLDGPATPVGALSKALTKLQSSTKLRRL 277

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           REAAK  T                      K+   QAH VA KV+EYARGM+S SGS  F
Sbjct: 278 REAAKTVT----------------------KQIGGQAHEVAAKVDEYARGMVSASGSTLF 337

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGH+++DL  I +KVKSM  P PVL+HI+T+K KGY   E AAD++   
Sbjct: 338 EELGLYYIGPVDGHSVDDLVAIFNKVKSMPAPGPVLVHIVTEKGKGYPPAEAAADRMHGV 397

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   +QFK+KC TLSYTQYFAE+LI+EAE D+ +V   A MGGGT LN+F KRF  
Sbjct: 398 VKFDPTTGRQFKSKCSTLSYTQYFAEALIREAEADDKVVGIHAAMGGGTGLNYFHKRFPE 457

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLA EG+KPFC IYSSFLQ+G+D         +LPVRFAMDRA
Sbjct: 458 RCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQRLPVRFAMDRA 517

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FD+ YMACL NMVVMAP+DEAELMHMVATAAAIDDRPSCF FP+GN 
Sbjct: 518 GLVGADGPTHCGAFDVAYMACLPNMVVMAPADEAELMHMVATAAAIDDRPSCFRFPRGNG 577

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 512
           IG VL  ++KGTP+EV          +  +++     ++ G+G  V   +     L EHG
Sbjct: 578 IGAVLPPNHKGTPLEVG---------KGRVLVGGNRVALLGYGTMVQACMKAAEALKEHG 607

[Close]
BLAST of Cp4.1LG01g08920 vs. Swiss-Prot
Match: DXS1_ORYSJ (1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2)

HSP 1 Score: 535.4 bits (1378), Expect = 7.4e-151
Identity = 290/483 (60.04%), Postives = 339/483 (70.19%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT-----VSFLAMTA 114
           +RQT+GL+GF KR ES +D+FG GHSST+ISAALGMAV R+L G +      +   AMTA
Sbjct: 160 MRQTNGLSGFTKRSESEYDSFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTA 219

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAGYLD +MI+ILNDN QVSLPTATLDGPA  VGALSSAL+KL++S   R+L
Sbjct: 220 GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPAPPVGALSSALSKLQSSRPLREL 279

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           RE AK  T                      K+     H +A KV+EYARGMISGSGS  F
Sbjct: 280 REVAKGVT----------------------KQIGGSVHELAAKVDEYARGMISGSGSTLF 339

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN++DL TIL +VKS  T  PVLIH++T+K +GY   E AADK    
Sbjct: 340 EELGLYYIGPVDGHNIDDLITILREVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGV 399

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   KQFK+   TLSYT YFAE+LI EAE DN +V   A MGGGT LN+F +RF N
Sbjct: 400 AKFDPATGKQFKSPAKTLSYTNYFAEALIAEAEQDNRVVAIHAAMGGGTGLNYFLRRFPN 459

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLA EG+KPFC IYSSFLQ+G+D         KLPVRFAMDRA
Sbjct: 460 RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRA 519

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FD+TYMACL NMVVMAPSDEAEL HMVATAAAIDDRPSCF +P+GN 
Sbjct: 520 GLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELCHMVATAAAIDDRPSCFRYPRGNG 579

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 514
           IGV L  + KG P+EV          +  +++  E  ++ G+G  V Y L    +++ HG
Sbjct: 580 IGVPLPPNYKGVPLEVG---------KGRVLLEGERVALLGYGSAVQYCLAAASLVERHG 611

[Close]
BLAST of Cp4.1LG01g08920 vs. Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 6.8e-144
Identity = 280/483 (57.97%), Postives = 329/483 (68.12%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT-----VSFLAMTA 114
           LRQT+GLAGF KR ES +D FG GHSST+ISA LGMAV R+L GR       +   AMTA
Sbjct: 163 LRQTNGLAGFTKRSESEYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTA 222

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAGYLD +MI+ILNDN QVSLPTATLDGP   VGALSSAL++L+++   R+L
Sbjct: 223 GQAYEAMNNAGYLDSDMIVILNDNRQVSLPTATLDGPVPPVGALSSALSRLQSNRPLREL 282

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           RE AK  T                      K+     H +A KV+EYARGMISGSGS  F
Sbjct: 283 REVAKGVT----------------------KQIGGPMHELAAKVDEYARGMISGSGSTLF 342

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN++DL +IL +V+S  T  PVLIH++T+K +GY   E AADK    
Sbjct: 343 EELGLYYIGPVDGHNIDDLISILKEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGV 402

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   KQFK    T SYT YFAE+LI EAE D +IV   A MGGGT +N F +RF  
Sbjct: 403 AKFDPATGKQFKGSAKTQSYTTYFAEALIAEAEADKDIVAIHAAMGGGTGMNLFLRRFPT 462

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLA EG+KPFC IYSSF+Q+ +D         KLPVRFAMDRA
Sbjct: 463 RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRA 522

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FD+T+MACL NMVVMAPSDEAEL H+VATAAAIDDRPSCF +P+GN 
Sbjct: 523 GLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFHIVATAAAIDDRPSCFRYPRGNG 582

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 514
           IGV L   NKG P+EV          +  I++  E  ++ G+G  V   L    +L+  G
Sbjct: 583 IGVELPAGNKGIPLEVG---------KGRILVEGERVALLGYGSAVQNCLAAASVLESRG 614

[Close]
BLAST of Cp4.1LG01g08920 vs. Swiss-Prot
Match: DXS_ARATH (1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=DXS PE=1 SV=2)

HSP 1 Score: 504.6 bits (1298), Expect = 1.4e-141
Identity = 275/483 (56.94%), Postives = 328/483 (67.91%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT-----VSFLAMTA 114
           +RQT+GL+GF KR ES HD FG GHSST+ISA LGMAV R+L G+       +   AMTA
Sbjct: 164 MRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTA 223

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAGYLD +MI+ILNDN QVSLPTATLDGP+  VGALSSAL++L+++   R+L
Sbjct: 224 GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALREL 283

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           RE AK  T                      K+     H +A KV+EYARGMISG+GS  F
Sbjct: 284 REVAKGMT----------------------KQIGGPMHQLAAKVDEYARGMISGTGSSLF 343

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN++DL  IL +VKS  T  PVLIH++T+K +GY   E A DK    
Sbjct: 344 EELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGV 403

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   +QFK    T SYT YFAE+L+ EAEVD ++V   A MGGGT LN FQ+RF  
Sbjct: 404 VKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPT 463

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLA EG+KPFC IYSSF+Q+ +D         KLPVRFAMDRA
Sbjct: 464 RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRA 523

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FD+T+MACL NM+VMAPSDEA+L +MVATA AIDDRPSCF +P+GN 
Sbjct: 524 GLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNG 583

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 514
           IGV L   NKG PIE+          +  I+   E  ++ G+G  V   L    +L+E G
Sbjct: 584 IGVALPPGNKGVPIEIG---------KGRILKEGERVALLGYGSAVQSCLGAAVMLEERG 615

[Close]
BLAST of Cp4.1LG01g08920 vs. Swiss-Prot
Match: DXS_RHOCS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dxs PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 7.3e-106
Identity = 242/568 (42.61%), Postives = 322/568 (56.69%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT-----VSFLAMTA 114
           LR   GL+GF KR ES +D FGAGHSSTSISAALGMAV R+ LG +      +   +++A
Sbjct: 97  LRMGGGLSGFTKRAESEYDPFGAGHSSTSISAALGMAVGRDQLGHKNHVICVIGDGSISA 156

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           G AYEAMNNAG ++  MI+ILNDN+    P          VGA+S  L++L +S ++R L
Sbjct: 157 GMAYEAMNNAGAMNSRMIVILNDNDMSIAPP---------VGAMSGYLSRLISSRQYRGL 216

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           RE  K      +++ L                  R     A +  EYARG ++G     F
Sbjct: 217 RELGKQ-----VAERLP-----------------RPLQEAARRAEEYARGFVTGG--TLF 276

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKIK-- 294
           EE+G YY+GP DGHNL+ L  +L+ ++      PVLIH +T+K +GY   E +ADK+   
Sbjct: 277 EEMGFYYVGPIDGHNLDHLLPVLENIRDDQGTGPVLIHAVTQKGRGYGPAERSADKLHAV 336

Query: 295 ---------QFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                    Q KAK    SYT+ FA+SLI+EAE D+ +V   A M  GT L+ F+KRF +
Sbjct: 337 SKFDVITGAQAKAKANAPSYTRVFADSLIQEAEADSRVVAITAAMPSGTGLDLFEKRFPD 396

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
             +DV IAEQHAVTFAAGLA EG+KPFC IYS+FLQ+ +D          LPVRFA+DRA
Sbjct: 397 RTYDVGIAEQHAVTFAAGLAAEGLKPFCAIYSTFLQRAYDQVVHDVCIQNLPVRFAIDRA 456

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSC-------- 474
           GLVG+DG TH G+FD+ Y+ C+ N+V+MA +DEAEL HMVATAAA D  P          
Sbjct: 457 GLVGSDGCTHAGSFDVAYLGCVPNIVIMAAADEAELKHMVATAAAYDHGPIAVRYPRGEG 516

Query: 475 --FWFPK---------------GNEIGVVLL-------------LDNKGTPIEVS----- 534
                P+               G ++ ++ L             L+ +G    V+     
Sbjct: 517 VGLEMPERGQVLEIGKGRIVKEGTKVAILSLGTRLKEALLAAEDLNARGLSTTVADARFA 576

Query: 535 --IEE--VRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHGLKLRTIVLPD--- 542
             I+E  +R+  Q+HE+++TVEEGSIGGFG  V +FL  + +LD+ GLK+R +VLPD   
Sbjct: 577 KPIDEALIRRLAQDHEVLITVEEGSIGGFGSYVLHFLAQSGLLDQ-GLKVRPMVLPDIFQ 630

[Close]
BLAST of Cp4.1LG01g08920 vs. TrEMBL
Match: A0A0A0L869_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G114510 PE=3 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 2.8e-165
Identity = 321/481 (66.74%), Postives = 359/481 (74.64%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT--VSFL---AMTA 114
           LRQTSGLAGFPKRDES+HDAFGAGHSSTSISA LGMAV R+LLG++   +S +   AMTA
Sbjct: 156 LRQTSGLAGFPKRDESIHDAFGAGHSSTSISAGLGMAVGRDLLGKKNSVISVIGDGAMTA 215

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAGYLD NMI+ILNDN QVSLPTATLDGPAT VGALSSALTKL+AST+FRKL
Sbjct: 216 GQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATPVGALSSALTKLQASTQFRKL 275

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           REAAK  T                      K+  +Q HGVA KV+EYARGMISGSGS FF
Sbjct: 276 REAAKTIT----------------------KQIGKQTHGVAAKVDEYARGMISGSGSTFF 335

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN+ DL TIL+KVKSM  P PVLIHI+T+K KGY   E AADK+   
Sbjct: 336 EELGLYYIGPVDGHNVGDLVTILEKVKSMPAPGPVLIHILTEKGKGYPPAEAAADKMHGV 395

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   KQFK K PTLSYTQYFAESLIKEAE+D+ IV   A MGGGT LN+FQK+F  
Sbjct: 396 VKFDPKTGKQFKTKSPTLSYTQYFAESLIKEAELDDKIVAIHAAMGGGTGLNYFQKKFPQ 455

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFD--------GKLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLATEG+KPFC IYSSFLQ+GFD         KLPVRFAMDRA
Sbjct: 456 RCFDVGIAEQHAVTFAAGLATEGIKPFCAIYSSFLQRGFDQVVHDVDLQKLPVRFAMDRA 515

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FDITYMACL NM+VMAP+DEAEL+HMVATAA IDDRPSCF FP+GN 
Sbjct: 516 GLVGADGPTHCGAFDITYMACLPNMIVMAPADEAELIHMVATAAEIDDRPSCFRFPRGNG 575

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 512
           IGVV+  + KGTPIE+          +  I+M     +I G+G  V   +  + +L   G
Sbjct: 576 IGVVVPPNFKGTPIEIG---------KGRIVMEGTRVAILGYGSIVQQCVEASELLKTRG 605

[Close]
BLAST of Cp4.1LG01g08920 vs. TrEMBL
Match: A0A0S3R382_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G290500 PE=3 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 1.3e-162
Identity = 315/483 (65.22%), Postives = 356/483 (73.71%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT--VSFL---AMTA 114
           +R+TSGLAGFPKRDESVHDAFG GHSSTSISA LGMAVAR+LLG++   +S +   A+TA
Sbjct: 159 IRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAVARDLLGKKNSIISVIGDGALTA 218

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAG+LD NMI+ILNDN QVSLPTATLDGPA+ VGALSSAL+K++AST+FRKL
Sbjct: 219 GQAYEAMNNAGFLDSNMIVILNDNKQVSLPTATLDGPASPVGALSSALSKIQASTEFRKL 278

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           REAAK  T                      K+   Q H VA KV+EYARGMISGSGS  F
Sbjct: 279 REAAKSIT----------------------KQIGGQTHQVAAKVDEYARGMISGSGSTLF 338

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN+EDL TI +KVKSM  P PVLIHI+T+K KGY   E AADK+   
Sbjct: 339 EELGLYYIGPVDGHNIEDLVTIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEKAADKMHGV 398

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   KQFKAK  TLSYTQYFAESLIKEAE+DN IV   A MGGGT LN+F KRF +
Sbjct: 399 VKFDPKTGKQFKAKSSTLSYTQYFAESLIKEAEIDNKIVAIHAAMGGGTGLNYFHKRFPD 458

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLA EG+KPFC IYSSFLQ+G+D         KLPVRFAMDRA
Sbjct: 459 RCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRA 518

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FDITYMACL NMVVMAPSDEAELMHMVATAA IDDRPSCF FP+GN 
Sbjct: 519 GLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAATIDDRPSCFRFPRGNG 578

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 514
           +G  L L+NKGTP+E+          +  I+M     +I G+G  V      + +L E G
Sbjct: 579 LGATLPLNNKGTPLEIG---------KGRILMEGSRVAILGYGSVVQQCRHASELLKEVG 610

[Close]
BLAST of Cp4.1LG01g08920 vs. TrEMBL
Match: A0A0L9TMU0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g146400 PE=3 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 1.3e-162
Identity = 315/483 (65.22%), Postives = 356/483 (73.71%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT--VSFL---AMTA 114
           +R+TSGLAGFPKRDESVHDAFG GHSSTSISA LGMAVAR+LLG++   +S +   A+TA
Sbjct: 159 IRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAVARDLLGKKNSIISVIGDGALTA 218

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAG+LD NMI+ILNDN QVSLPTATLDGPA+ VGALSSAL+K++AST+FRKL
Sbjct: 219 GQAYEAMNNAGFLDSNMIVILNDNKQVSLPTATLDGPASPVGALSSALSKIQASTEFRKL 278

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           REAAK  T                      K+   Q H VA KV+EYARGMISGSGS  F
Sbjct: 279 REAAKSIT----------------------KQIGGQTHQVAAKVDEYARGMISGSGSTLF 338

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN+EDL TI +KVKSM  P PVLIHI+T+K KGY   E AADK+   
Sbjct: 339 EELGLYYIGPVDGHNIEDLVTIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEKAADKMHGV 398

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   KQFKAK  TLSYTQYFAESLIKEAE+DN IV   A MGGGT LN+F KRF +
Sbjct: 399 VKFDPKTGKQFKAKSSTLSYTQYFAESLIKEAEIDNKIVAIHAAMGGGTGLNYFHKRFPD 458

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLA EG+KPFC IYSSFLQ+G+D         KLPVRFAMDRA
Sbjct: 459 RCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRA 518

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FDITYMACL NMVVMAPSDEAELMHMVATAA IDDRPSCF FP+GN 
Sbjct: 519 GLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAATIDDRPSCFRFPRGNG 578

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 514
           +G  L L+NKGTP+E+          +  I+M     +I G+G  V      + +L E G
Sbjct: 579 LGATLPLNNKGTPLEIG---------KGRILMEGSRVAILGYGSVVQQCRHASELLKEVG 610

[Close]
BLAST of Cp4.1LG01g08920 vs. TrEMBL
Match: C7U111_SOLLC (1-deoxy-D-xylulose 5-phosphate synthase 2 OS=Solanum lycopersicum GN=dxs2 PE=3 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 2.9e-162
Identity = 316/483 (65.42%), Postives = 356/483 (73.71%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT--VSFL---AMTA 114
           +R+TSGLA FPKRDESVHDAFGAGHSSTSISA LGMAVAR+LLG     +S +   AMTA
Sbjct: 159 MRKTSGLAPFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLGNNNHVISVIGDGAMTA 218

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAG+LD N+I+ILNDN QVSLPTATLDGPAT VGALSSAL+KL+AS KFR+L
Sbjct: 219 GQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSALSKLQASLKFRQL 278

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           REAAK  T                      K+   QAH VA KV+EYARGM+S SGS  F
Sbjct: 279 REAAKTIT----------------------KQIGPQAHEVAAKVDEYARGMLSASGSTLF 338

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN+EDL TIL+KVK++  P PVLIHI+T+K KGY   E A DK+   
Sbjct: 339 EELGLYYIGPVDGHNIEDLITILEKVKALPAPGPVLIHIVTEKGKGYLPAEAADDKMHGV 398

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   KQFKAK PTL+YTQYFAESLIKEAE DN IV   A MGGGT LN+FQK+F  
Sbjct: 399 AQFDPKTGKQFKAKSPTLTYTQYFAESLIKEAENDNKIVAIHAAMGGGTGLNYFQKQFPE 458

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLATEG+KPFC IYSSFLQ+G+D         KLPVRFAMDRA
Sbjct: 459 RCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRA 518

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FD+TYMACL NMVVMAPSDEAELMHMVATAAAIDDRPSCF FP+GN 
Sbjct: 519 GLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNG 578

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 514
           IG +L L+NKG PIEV          +  I+   E  +I G+G  +   L    IL+ H 
Sbjct: 579 IGAILSLNNKGIPIEVG---------KGRILREGERVAILGYGSIIQQCLGAADILNSHD 610

[Close]
BLAST of Cp4.1LG01g08920 vs. TrEMBL
Match: K4D5P3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 579.7 bits (1493), Expect = 3.8e-162
Identity = 316/483 (65.42%), Postives = 356/483 (73.71%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT--VSFL---AMTA 114
           +R+TSGLA FPKRDESVHDAFGAGHSSTSISA LGMAVAR+LLG     +S +   AMTA
Sbjct: 159 MRKTSGLAPFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLGNNNHVISVIGDGAMTA 218

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAG+LD N+I+ILNDN QVSLPTATLDGPAT VGALSSAL+KL+AS KFR+L
Sbjct: 219 GQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSALSKLQASLKFRQL 278

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           REAAK  T                      K+   QAH VA KV+EYARGM+S SGS  F
Sbjct: 279 REAAKTIT----------------------KQIGPQAHEVAAKVDEYARGMLSASGSTLF 338

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN+EDL TIL+KVK++  P PVLIHI+T+K KGY   E A DK+   
Sbjct: 339 EELGLYYIGPVDGHNIEDLITILEKVKALPAPGPVLIHIVTEKGKGYLPAEAADDKMHGV 398

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   KQFKAK PTL+YTQYFAESLIKEAE DN IV   A MGGGT LN+FQK+F  
Sbjct: 399 AQFDPKTGKQFKAKSPTLTYTQYFAESLIKEAENDNKIVAIHAAMGGGTGLNYFQKQFPE 458

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLATEG+KPFC IYSSFLQ+G+D         KLPVRFAMDRA
Sbjct: 459 RCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRA 518

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FD+TYMACL NMVVMAPSDEAELMHMVATAAAIDDRPSCF FP+GN 
Sbjct: 519 GLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNG 578

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 514
           IG +L L+NKG PIEV          +  I+   E  +I G+G  +   L    IL+ H 
Sbjct: 579 IGAILPLNNKGIPIEVG---------KGRILREGERVAILGYGSIIQQCLGAADILNSHD 610

[Close]
BLAST of Cp4.1LG01g08920 vs. TAIR10
Match: AT4G15560.1 (AT4G15560.1 Deoxyxylulose-5-phosphate synthase)

HSP 1 Score: 504.6 bits (1298), Expect = 7.9e-143
Identity = 275/483 (56.94%), Postives = 328/483 (67.91%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT-----VSFLAMTA 114
           +RQT+GL+GF KR ES HD FG GHSST+ISA LGMAV R+L G+       +   AMTA
Sbjct: 164 MRQTNGLSGFTKRGESEHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTA 223

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAGYLD +MI+ILNDN QVSLPTATLDGP+  VGALSSAL++L+++   R+L
Sbjct: 224 GQAYEAMNNAGYLDSDMIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALREL 283

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           RE AK  T                      K+     H +A KV+EYARGMISG+GS  F
Sbjct: 284 REVAKGMT----------------------KQIGGPMHQLAAKVDEYARGMISGTGSSLF 343

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN++DL  IL +VKS  T  PVLIH++T+K +GY   E A DK    
Sbjct: 344 EELGLYYIGPVDGHNIDDLVAILKEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGV 403

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   +QFK    T SYT YFAE+L+ EAEVD ++V   A MGGGT LN FQ+RF  
Sbjct: 404 VKFDPATGRQFKTTNKTQSYTTYFAEALVAEAEVDKDVVAIHAAMGGGTGLNLFQRRFPT 463

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLA EG+KPFC IYSSF+Q+ +D         KLPVRFAMDRA
Sbjct: 464 RCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFMQRAYDQVVHDVDLQKLPVRFAMDRA 523

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FD+T+MACL NM+VMAPSDEA+L +MVATA AIDDRPSCF +P+GN 
Sbjct: 524 GLVGADGPTHCGAFDVTFMACLPNMIVMAPSDEADLFNMVATAVAIDDRPSCFRYPRGNG 583

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 514
           IGV L   NKG PIE+          +  I+   E  ++ G+G  V   L    +L+E G
Sbjct: 584 IGVALPPGNKGVPIEIG---------KGRILKEGERVALLGYGSAVQSCLGAAVMLEERG 615

[Close]
BLAST of Cp4.1LG01g08920 vs. TAIR10
Match: AT5G11380.1 (AT5G11380.1 1-deoxy-D-xylulose 5-phosphate synthase 3)

HSP 1 Score: 348.2 bits (892), Expect = 9.5e-96
Identity = 204/471 (43.31%), Postives = 287/471 (60.93%), Query Frame = 1 

Query: 56  RQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRR-----TVSFLAMTAG 115
           RQ SG++G   R ES +D+FG GH   SISA LG+AVAR++ G+R      +  + +TAG
Sbjct: 166 RQNSGISGVTSRLESEYDSFGTGHGCNSISAGLGLAVARDMKGKRDRVVAVIDNVTITAG 225

Query: 116 QAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKLR 175
           QAYEAM+NAGYLD NMI+ILND+   SL     +G    + ALSS ++K+++S  FRK R
Sbjct: 226 QAYEAMSNAGYLDSNMIVILNDSRH-SLHPNMEEGSKASISALSSIMSKIQSSKVFRKFR 285

Query: 176 EAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFFE 235
           E AK  T+  I K +                 W      A KV+EYARGM+  +GS  FE
Sbjct: 286 ELAKAMTK-RIGKGM---------------YEW------AAKVDEYARGMVGPTGSTLFE 345

Query: 236 ELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKIKQFK 295
           ELGLYYIGP DGHN+EDL  +L +V S+ +  PVL+H+IT+  +  +TV+    K ++  
Sbjct: 346 ELGLYYIGPVDGHNIEDLVCVLREVSSLDSMGPVLVHVITEGNRDAETVKNIMVKDRR-- 405

Query: 296 AKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSNHCFDVRIAEQHA 355
                 +Y+  F E+L+ EAE D +IVV  A M    SL  FQ+RF +  F+V +AEQHA
Sbjct: 406 ------TYSDCFVEALVMEAEKDRDIVVVHAGMEMDPSLLTFQERFPDRFFNVGMAEQHA 465

Query: 356 VTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRAGLVGADGPTHCG 415
           VTF+AGL++ G+KPFC+I S+FLQ+ +D         +  VRF +  AGLVG+DGP  CG
Sbjct: 466 VTFSAGLSSGGLKPFCIIPSAFLQRAYDQVVHDVDRQRKAVRFVITSAGLVGSDGPVQCG 525

Query: 416 TFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNEIGVVLLLDNKGT 475
            FDI +M+ L NM+ MAP+DE EL++MVATAA + DRP CF FP+G+ + +  L+   G 
Sbjct: 526 AFDIAFMSSLPNMIAMAPADEDELVNMVATAAYVTDRPVCFRFPRGSIVNMNYLVPT-GL 585

Query: 476 PIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHGLKL 514
           PIE+             +++  ++ ++ G+G  V   L    +L + GL +
Sbjct: 586 PIEIG---------RGRVLVEGQDVALLGYGAMVQNCLHAHSLLSKLGLNV 595

[Close]
BLAST of Cp4.1LG01g08920 vs. TAIR10
Match: AT3G21500.2 (AT3G21500.2 1-deoxy-D-xylulose 5-phosphate synthase 1)

HSP 1 Score: 327.0 bits (837), Expect = 2.3e-89
Identity = 172/314 (54.78%), Postives = 208/314 (66.24%), Query Frame = 1 

Query: 219 GMISGSGSIFFEELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQT 278
           GMI  + S  FEELG +Y+GP DGHN++DL +IL+ +KS  T  PVLIH++T+K +GY  
Sbjct: 269 GMIRETSSTLFEELGFHYVGPVDGHNIDDLVSILETLKSTKTIGPVLIHVVTEKGRGYPY 328

Query: 279 VETAADKI-----------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGT 338
            E A DK            KQFK    T SYT  F E+LI EAE D +IV   A MGGGT
Sbjct: 329 AERADDKYHGVLKFDPETGKQFKNISKTQSYTSCFVEALIAEAEADKDIVAIHAAMGGGT 388

Query: 339 SLNHFQKRFSNHCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG-------- 398
            LN F+ RF   CFDV IAEQHAVTFAAGLA EG+KPFC IYSSF+Q+ +D         
Sbjct: 389 MLNLFESRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCTIYSSFMQRAYDQVVHDVDLQ 448

Query: 399 KLPVRFAMDRAGLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDR 458
           KLPVRFA+DRAGL+GADGPTHCG FD+T+MACL NM+VMAPSDEAEL +MVATAAAIDDR
Sbjct: 449 KLPVRFAIDRAGLMGADGPTHCGAFDVTFMACLPNMIVMAPSDEAELFNMVATAAAIDDR 508

Query: 459 PSCFWFPKGNEIGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYF 514
           PSCF + +GN IGV L   NKG P+++             I+   E  ++ G+G  V   
Sbjct: 509 PSCFRYHRGNGIGVSLPPGNKGVPLQIG---------RGRILRDGERVALLGYGSAVQRC 568

[Close]
BLAST of Cp4.1LG01g08920 vs. NCBI nr
Match: gi|659098540|ref|XP_008450188.1| (PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucumis melo])

HSP 1 Score: 595.1 bits (1533), Expect = 1.3e-166
Identity = 324/481 (67.36%), Postives = 360/481 (74.84%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT--VSFL---AMTA 114
           LRQTSGLAGFPKRDES+HDAFGAGHSSTSISA LGMAV R+LLG++   +S +   AMTA
Sbjct: 156 LRQTSGLAGFPKRDESIHDAFGAGHSSTSISAGLGMAVGRDLLGKKNSVISVIGDGAMTA 215

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAGYLD NMI+ILNDN QVSLPTATLDGPAT VGALSSALTKL+AST+FRKL
Sbjct: 216 GQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATPVGALSSALTKLQASTQFRKL 275

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           REAAK  T                      K+  +Q HGVA KV+EYARGMISGSGS FF
Sbjct: 276 REAAKTIT----------------------KQIGKQTHGVAAKVDEYARGMISGSGSTFF 335

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN+ DL TILDKVKSM  P PVLIHI+T+K KGY   E AADK+   
Sbjct: 336 EELGLYYIGPVDGHNVGDLVTILDKVKSMPAPGPVLIHILTEKGKGYPPAEAAADKMHGV 395

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   KQFK K PTLSYTQYFAESLIKEAE+D+ IV   A MGGGT LN+FQKRF  
Sbjct: 396 VKFDPKTGKQFKTKSPTLSYTQYFAESLIKEAELDDKIVAIHAAMGGGTGLNYFQKRFPQ 455

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFD--------GKLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLATEG+KPFC IYSSFLQ+GFD         KLPVRFAMDRA
Sbjct: 456 RCFDVGIAEQHAVTFAAGLATEGIKPFCAIYSSFLQRGFDQVVHDVDLQKLPVRFAMDRA 515

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FDITYMACL NM+VMAP+DEAEL+HMVATAAAIDDRPSCF FP+GN 
Sbjct: 516 GLVGADGPTHCGAFDITYMACLPNMIVMAPADEAELIHMVATAAAIDDRPSCFRFPRGNG 575

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 512
           IGVV+  + KGTPIE+          +  I+M     +I G+G  V   +  + +L   G
Sbjct: 576 IGVVVPPNFKGTPIEIG---------KGRILMEGTRVAILGYGSIVQQCVEASELLKTRG 605

[Close]
BLAST of Cp4.1LG01g08920 vs. NCBI nr
Match: gi|449432964|ref|XP_004134268.1| (PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 590.1 bits (1520), Expect = 4.1e-165
Identity = 321/481 (66.74%), Postives = 359/481 (74.64%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT--VSFL---AMTA 114
           LRQTSGLAGFPKRDES+HDAFGAGHSSTSISA LGMAV R+LLG++   +S +   AMTA
Sbjct: 156 LRQTSGLAGFPKRDESIHDAFGAGHSSTSISAGLGMAVGRDLLGKKNSVISVIGDGAMTA 215

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAGYLD NMI+ILNDN QVSLPTATLDGPAT VGALSSALTKL+AST+FRKL
Sbjct: 216 GQAYEAMNNAGYLDTNMIVILNDNKQVSLPTATLDGPATPVGALSSALTKLQASTQFRKL 275

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           REAAK  T                      K+  +Q HGVA KV+EYARGMISGSGS FF
Sbjct: 276 REAAKTIT----------------------KQIGKQTHGVAAKVDEYARGMISGSGSTFF 335

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN+ DL TIL+KVKSM  P PVLIHI+T+K KGY   E AADK+   
Sbjct: 336 EELGLYYIGPVDGHNVGDLVTILEKVKSMPAPGPVLIHILTEKGKGYPPAEAAADKMHGV 395

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   KQFK K PTLSYTQYFAESLIKEAE+D+ IV   A MGGGT LN+FQK+F  
Sbjct: 396 VKFDPKTGKQFKTKSPTLSYTQYFAESLIKEAELDDKIVAIHAAMGGGTGLNYFQKKFPQ 455

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFD--------GKLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLATEG+KPFC IYSSFLQ+GFD         KLPVRFAMDRA
Sbjct: 456 RCFDVGIAEQHAVTFAAGLATEGIKPFCAIYSSFLQRGFDQVVHDVDLQKLPVRFAMDRA 515

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FDITYMACL NM+VMAP+DEAEL+HMVATAA IDDRPSCF FP+GN 
Sbjct: 516 GLVGADGPTHCGAFDITYMACLPNMIVMAPADEAELIHMVATAAEIDDRPSCFRFPRGNG 575

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 512
           IGVV+  + KGTPIE+          +  I+M     +I G+G  V   +  + +L   G
Sbjct: 576 IGVVVPPNFKGTPIEIG---------KGRIVMEGTRVAILGYGSIVQQCVEASELLKTRG 605

[Close]
BLAST of Cp4.1LG01g08920 vs. NCBI nr
Match: gi|920687925|gb|KOM31908.1| (hypothetical protein LR48_Vigan01g146400 [Vigna angularis])

HSP 1 Score: 581.3 bits (1497), Expect = 1.9e-162
Identity = 315/483 (65.22%), Postives = 356/483 (73.71%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT--VSFL---AMTA 114
           +R+TSGLAGFPKRDESVHDAFG GHSSTSISA LGMAVAR+LLG++   +S +   A+TA
Sbjct: 159 IRKTSGLAGFPKRDESVHDAFGVGHSSTSISAGLGMAVARDLLGKKNSIISVIGDGALTA 218

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAG+LD NMI+ILNDN QVSLPTATLDGPA+ VGALSSAL+K++AST+FRKL
Sbjct: 219 GQAYEAMNNAGFLDSNMIVILNDNKQVSLPTATLDGPASPVGALSSALSKIQASTEFRKL 278

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           REAAK  T                      K+   Q H VA KV+EYARGMISGSGS  F
Sbjct: 279 REAAKSIT----------------------KQIGGQTHQVAAKVDEYARGMISGSGSTLF 338

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN+EDL TI +KVKSM  P PVLIHI+T+K KGY   E AADK+   
Sbjct: 339 EELGLYYIGPVDGHNIEDLVTIFEKVKSMPAPGPVLIHIVTEKGKGYPPAEKAADKMHGV 398

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   KQFKAK  TLSYTQYFAESLIKEAE+DN IV   A MGGGT LN+F KRF +
Sbjct: 399 VKFDPKTGKQFKAKSSTLSYTQYFAESLIKEAEIDNKIVAIHAAMGGGTGLNYFHKRFPD 458

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLA EG+KPFC IYSSFLQ+G+D         KLPVRFAMDRA
Sbjct: 459 RCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRA 518

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FDITYMACL NMVVMAPSDEAELMHMVATAA IDDRPSCF FP+GN 
Sbjct: 519 GLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMVATAATIDDRPSCFRFPRGNG 578

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 514
           +G  L L+NKGTP+E+          +  I+M     +I G+G  V      + +L E G
Sbjct: 579 LGATLPLNNKGTPLEIG---------KGRILMEGSRVAILGYGSVVQQCRHASELLKEVG 610

[Close]
BLAST of Cp4.1LG01g08920 vs. NCBI nr
Match: gi|697163331|ref|XP_009590491.1| (PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Nicotiana tomentosiformis])

HSP 1 Score: 580.1 bits (1494), Expect = 4.2e-162
Identity = 319/483 (66.05%), Postives = 355/483 (73.50%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT--VSFL---AMTA 114
           +R+TSGLA FPKRDESV+DAFGAGHSSTSISA LGMAV R+LLG+    +S +   AMTA
Sbjct: 158 IRKTSGLAPFPKRDESVYDAFGAGHSSTSISAGLGMAVGRDLLGKNNHVISVIGDGAMTA 217

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAG+LD N+I+ILNDN QVSLPTATLDGPAT VGALSSAL+KL+ASTKFR+L
Sbjct: 218 GQAYEAMNNAGFLDANLIVILNDNEQVSLPTATLDGPATPVGALSSALSKLQASTKFRQL 277

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           REAAK  T                      K+   QAH VA KV+EYARGMIS SGS  F
Sbjct: 278 REAAKSIT----------------------KQIGPQAHEVAAKVDEYARGMISASGSTLF 337

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN+EDL TIL KVKSM  P PVLIHI+T+K KGY   E AADK+   
Sbjct: 338 EELGLYYIGPVDGHNIEDLITILKKVKSMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGV 397

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   KQFKAK  TLSYTQYFAESLIKEAEVDN IV   A MGGGT LN+FQKRF  
Sbjct: 398 VQFDPKTGKQFKAKSSTLSYTQYFAESLIKEAEVDNKIVAIHAAMGGGTGLNYFQKRFPE 457

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLATEG+KPFC IYSSFLQ+G+D         KLPVRFAMDRA
Sbjct: 458 RCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRA 517

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FD+ YMACL NMVVMAPSDEAELMHMVATAAAIDDRPSCF FP+GN 
Sbjct: 518 GLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNG 577

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 514
           +G +L  +NKG PIEV          +  I+   E  +I G+G  V   L    IL+ H 
Sbjct: 578 VGALLPPNNKGIPIEVG---------KGRILREGERVAILGYGSIVQQCLGAADILNTHN 609

[Close]
BLAST of Cp4.1LG01g08920 vs. NCBI nr
Match: gi|256619606|emb|CAZ66649.1| (1-deoxy-D-xylulose 5-phosphate synthase 2 precursor [Solanum lycopersicum])

HSP 1 Score: 580.1 bits (1494), Expect = 4.2e-162
Identity = 316/483 (65.42%), Postives = 356/483 (73.71%), Query Frame = 1 

Query: 55  LRQTSGLAGFPKRDESVHDAFGAGHSSTSISAALGMAVARELLGRRT--VSFL---AMTA 114
           +R+TSGLA FPKRDESVHDAFGAGHSSTSISA LGMAVAR+LLG     +S +   AMTA
Sbjct: 159 MRKTSGLAPFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLGNNNHVISVIGDGAMTA 218

Query: 115 GQAYEAMNNAGYLDKNMIIILNDNNQVSLPTATLDGPATLVGALSSALTKLKASTKFRKL 174
           GQAYEAMNNAG+LD N+I+ILNDN QVSLPTATLDGPAT VGALSSAL+KL+AS KFR+L
Sbjct: 219 GQAYEAMNNAGFLDSNLIVILNDNKQVSLPTATLDGPATPVGALSSALSKLQASLKFRQL 278

Query: 175 REAAKDRTRLHISKALDTHQTFILLFTEHHKKNWRQAHGVAVKVNEYARGMISGSGSIFF 234
           REAAK  T                      K+   QAH VA KV+EYARGM+S SGS  F
Sbjct: 279 REAAKTIT----------------------KQIGPQAHEVAAKVDEYARGMLSASGSTLF 338

Query: 235 EELGLYYIGPTDGHNLEDLFTILDKVKSMSTPRPVLIHIITKKEKGYQTVETAADKI--- 294
           EELGLYYIGP DGHN+EDL TIL+KVK++  P PVLIHI+T+K KGY   E A DK+   
Sbjct: 339 EELGLYYIGPVDGHNIEDLITILEKVKALPAPGPVLIHIVTEKGKGYLPAEAADDKMHGV 398

Query: 295 --------KQFKAKCPTLSYTQYFAESLIKEAEVDNNIVVTDAVMGGGTSLNHFQKRFSN 354
                   KQFKAK PTL+YTQYFAESLIKEAE DN IV   A MGGGT LN+FQK+F  
Sbjct: 399 AQFDPKTGKQFKAKSPTLTYTQYFAESLIKEAENDNKIVAIHAAMGGGTGLNYFQKQFPE 458

Query: 355 HCFDVRIAEQHAVTFAAGLATEGVKPFCVIYSSFLQKGFDG--------KLPVRFAMDRA 414
            CFDV IAEQHAVTFAAGLATEG+KPFC IYSSFLQ+G+D         KLPVRFAMDRA
Sbjct: 459 RCFDVGIAEQHAVTFAAGLATEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRA 518

Query: 415 GLVGADGPTHCGTFDITYMACLSNMVVMAPSDEAELMHMVATAAAIDDRPSCFWFPKGNE 474
           GLVGADGPTHCG FD+TYMACL NMVVMAPSDEAELMHMVATAAAIDDRPSCF FP+GN 
Sbjct: 519 GLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELMHMVATAAAIDDRPSCFRFPRGNG 578

Query: 475 IGVVLLLDNKGTPIEVSIEEVRKHCQEHEIMMTVEEGSIGGFGYDVSYFLCLTRILDEHG 514
           IG +L L+NKG PIEV          +  I+   E  +I G+G  +   L    IL+ H 
Sbjct: 579 IGAILSLNNKGIPIEVG---------KGRILREGERVAILGYGSIIQQCLGAADILNSHD 610

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g08920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DXS2_ORYSJ3.9e-16062.79Probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic OS=Oryza sativ... [more]
DXS1_ORYSJ7.4e-15160.041-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic OS=Oryza sativa subsp. ... [more]
DXS_CAPAN6.8e-14457.97Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annu... [more]
DXS_ARATH1.4e-14156.941-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana G... [more]
DXS_RHOCS7.3e-10642.611-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum (strain ATCC ... [more]
BLAST of Cp4.1LG01g08920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L869_CUCSA2.8e-16566.74Uncharacterized protein OS=Cucumis sativus GN=Csa_3G114510 PE=3 SV=1[more]
A0A0S3R382_PHAAN1.3e-16265.22Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G290500 PE=... [more]
A0A0L9TMU0_PHAAN1.3e-16265.22Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g146400 PE=3 SV=1[more]
C7U111_SOLLC2.9e-16265.421-deoxy-D-xylulose 5-phosphate synthase 2 OS=Solanum lycopersicum GN=dxs2 PE=3 S... [more]
K4D5P3_SOLLC3.8e-16265.42Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1[more]
BLAST of Cp4.1LG01g08920 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15560.17.9e-14356.94 Deoxyxylulose-5-phosphate synthase[more]
AT5G11380.19.5e-9643.31 1-deoxy-D-xylulose 5-phosphate synthase 3[more]
AT3G21500.22.3e-8954.78 1-deoxy-D-xylulose 5-phosphate synthase 1[more]
BLAST of Cp4.1LG01g08920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659098540|ref|XP_008450188.1|1.3e-16667.36PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cu... [more]
gi|449432964|ref|XP_004134268.1|4.1e-16566.74PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Cu... [more]
gi|920687925|gb|KOM31908.1|1.9e-16265.22hypothetical protein LR48_Vigan01g146400 [Vigna angularis][more]
gi|697163331|ref|XP_009590491.1|4.2e-16266.05PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Ni... [more]
gi|256619606|emb|CAZ66649.1|4.2e-16265.421-deoxy-D-xylulose 5-phosphate synthase 2 precursor [Solanum lycopersicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0016114terpenoid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:00086611-deoxy-D-xylulose-5-phosphate synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR009014Transketo_C/PFOR_II
IPR005477Dxylulose-5-P_synthase
IPR005475Transketolase-like_Pyr-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0016114 terpenoid biosynthetic process
biological_process GO:0052865 1-deoxy-D-xylulose 5-phosphate biosynthetic process
biological_process GO:0009228 thiamine biosynthetic process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
molecular_function GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g08920.1Cp4.1LG01g08920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005475Transketolase-like, pyrimidine-binding domainPFAMPF02779Transket_pyrcoord: 296..449
score: 4.0
IPR005475Transketolase-like, pyrimidine-binding domainSMARTSM00861Transket_pyr_3coord: 296..453
score: 1.6
IPR005477Deoxyxylulose-5-phosphate synthasePFAMPF13292DXP_synthase_Ncoord: 55..270
score: 4.8
IPR009014Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IIGENE3DG3DSA:3.40.50.920coord: 469..529
score: 1.
NoneNo IPR availablePANTHERPTHR11624:SF83SUBFAMILY NOT NAMEDcoord: 55..183
score: 1.3E-246coord: 227..552
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g08920CmaCh04G008640Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g08920MELO3C014966.2Melon (DHL92) v3.6.1cpemedB485
Cp4.1LG01g08920Bhi11G000776Wax gourdcpewgoB0478
Cp4.1LG01g08920Bhi11G000770Wax gourdcpewgoB0486
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g08920Silver-seed gourdcarcpeB1417
Cp4.1LG01g08920Cucumber (Chinese Long) v3cpecucB0491
Cp4.1LG01g08920Cucurbita pepo (Zucchini)cpecpeB233
Cp4.1LG01g08920Cucumber (Gy14) v1cgycpeB0680
Cp4.1LG01g08920Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g08920Cucurbita moschata (Rifu)cmocpeB312
Cp4.1LG01g08920Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g08920Wild cucumber (PI 183967)cpecpiB392
Cp4.1LG01g08920Cucumber (Chinese Long) v2cpecuB393
Cp4.1LG01g08920Bottle gourd (USVL1VR-Ls)cpelsiB370
Cp4.1LG01g08920Watermelon (Charleston Gray)cpewcgB349
Cp4.1LG01g08920Watermelon (97103) v1cpewmB387
Cp4.1LG01g08920Melon (DHL92) v3.5.1cpemeB409
Cp4.1LG01g08920Cucumber (Gy14) v2cgybcpeB369
Cp4.1LG01g08920Melon (DHL92) v3.6.1cpemedB482