Cp4.1LG01g08440 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g08440
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionFiber expressed protein
LocationCp4.1LG01 : 4939634 .. 4941361 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGATTCTCTCCTCTAATTCCAACTACCAATGGATCCTCTCCCTCAAGATCTTCCTGATCTCCACTGGAGTTTTGTCCATGGCCGTCTTTCTCAAGCTCTCTGTTCCACTGGTGGCTGATTTCCTCGTCTCTGAAATCCCTTCCATCTGGACGTGCTTCATCTCCTGGTTAAGACCTCCTTATCTCTACTTGGTTATTAATTGCATAATCATCAGTATTGTTGCCTCTTCTAAGCTCCAGCAGAAGCTGGAGGATGGGGAATCCGTGCTATCCGTTCCTGAGACGCTTGCTCCTCCGCCCCTCGCTAAGATCTCCTCTGAGTCTGACTATGTTGTTTGTGGCGGTACCGATATTTTGAATGGATACTGTTACAACAATGCGAATCAGAACGCCGTCACTAAGATTGCGGACCTTCAGATTGACGAATCGAATGGCGTGTACGGACGGATGATGGTAGAACCTGGGGTTTCGGAGATGGAGAAGAAAGGGGAGAATGATTCTTTGATTCTGACAACAGCTGCTGATGAGACTGCTATGTCTAGTCCGATGACGAACGCTCTGCATAGGAAAGATTCCGTCGGACTTTTGTTTTCAAATGAGAAGGAGAAACCGCCGGTTTCTTCAAGAATCGGCCAACGGAAACTCGTGAAAGCCAGTCCTGAAGGTTCGATCTCTATTTCTTTCTCTCTATCTCTGTTCTTGTGAATTTATGAACACGGATTCTGGTAGCTAGTCATGTGAATCAACTTTAGAGAATGTATAAATTCTAAGATGAGTTTCAGAGTATCGTGCCGGTAAAGATCGACGGAGCCTCTCGTTACACACAGCACAAAATCAGATGGAATTTTTTTTTTTCTTTTTTTTGGGATAAATTTTTTTGAAAAAGCTGCCAAAAACAGCAAGCCTTTCGGTGGTAGGTCACAGAGCCGACTTTATTTCCCATGCCGTTAAAAGGCTCCAACGGAACTAAGTTTCCATCCCAAATACCGAAACTACCCTTGAAAGGGGTTTTTTATTCTAAAATGGCAAAAGAAGTAATTAGAATGAAGGTCATGGGGTTTTGTTTGCCGCGCAGGGAAGCCGTTGGGAGTTTCAAAACCGAAGAGGCAGGACACGCTGGAGAGCACGTGGAGGACAATAACGGAGGGGAGGTCAATGCCGTTAACGAGGCACTTGAGGAAGTCGGACACGTGGGAGTCACAGGGGCGAAGGGCCAACATGGCGGTGGATCCAGCGACGCCGCCTTCGAAGGTGATGACGAAGTCAGAGACGTTCAAGGACCGGAGCAACGTGGGGTCACCGAGTCCGTCGCCGGGGGGGTCGGGGAGGCTGAAGAGAGAACCGTCGCTGACCCAGGAGGAGTTGAACCGGCGAGTTGAGGCGTTCATAAAAAAGTTCAACGATGAGATGAGGTTGCAGAGGCAGGAATCGCTGAAGCAGTACCAGGAGATGGTGGGCAGTAGAGCCAACTAACTAGCGTTGTGTATATTTTTTACTCCAAATTCAACCATTTCCCTTTTTCCCAAATCTTAAATAGATTAGTATCAGATAAGGAATTAAGGATTAGGGTTTTTATTTTTTATTTTTTATTTTTTCAGTTTAGATTTCTTTCGACACACATTTGAACTTGGTGTTTCGTTTGGGGTGATGTTTATATTTTCATTTTCCTTTCATTAAAAGCCCTATGTTTTTTCTCCCTTTTTAAAGAAATGTAAGATGAGACTC

mRNA sequence

ATGCCGATTCTCTCCTCTAATTCCAACTACCAATGGATCCTCTCCCTCAAGATCTTCCTGATCTCCACTGGAGTTTTGTCCATGGCCGTCTTTCTCAAGCTCTCTGTTCCACTGGTGGCTGATTTCCTCGTCTCTGAAATCCCTTCCATCTGGACGTGCTTCATCTCCTGGTTAAGACCTCCTTATCTCTACTTGGTTATTAATTGCATAATCATCAGTATTGTTGCCTCTTCTAAGCTCCAGCAGAAGCTGGAGGATGGGGAATCCGTGCTATCCGTTCCTGAGACGCTTGCTCCTCCGCCCCTCGCTAAGATCTCCTCTGAGTCTGACTATGTTGTTTGTGGCGGTACCGATATTTTGAATGGATACTGTTACAACAATGCGAATCAGAACGCCGTCACTAAGATTGCGGACCTTCAGATTGACGAATCGAATGGCGTGGAAGCCGTTGGGAGTTTCAAAACCGAAGAGGCAGGACACGCTGGAGAGCACGTGGAGGACAATAACGGAGGGGAGGTCAATGCCGTTAACGAGGCACTTGAGGAAGTCGGACACGTGGGAGTCACAGGGGCGAAGGGCCAACATGGCGGTGGATCCAGCGACGCCGCCTTCGAAGGTGATGACGAAGTCAGAGACGTTCAAGGACCGGAGCAACGTGGGGTCACCGAGTCCGTCGCCGGGGGGGTCGGGGAGGCTGAAGAGAGAACCGTCGCTGACCCAGGAGGAGTTGAACCGGCGAGTTGAGGCGTTCATAAAAAAGTTCAACGATGAGATGAGGTTGCAGAGGCAGGAATCGCTGAAGCAGTACCAGGAGATGGTGGGCAGTAGAGCCAACTAACTAGCGTTGTGTATATTTTTTACTCCAAATTCAACCATTTCCCTTTTTCCCAAATCTTAAATAGATTAGTATCAGATAAGGAATTAAGGATTAGGGTTTTTATTTTTTATTTTTTATTTTTTCAGTTTAGATTTCTTTCGACACACATTTGAACTTGGTGTTTCGTTTGGGGTGATGTTTATATTTTCATTTTCCTTTCATTAAAAGCCCTATGTTTTTTCTCCCTTTTTAAAGAAATGTAAGATGAGACTC

Coding sequence (CDS)

ATGCCGATTCTCTCCTCTAATTCCAACTACCAATGGATCCTCTCCCTCAAGATCTTCCTGATCTCCACTGGAGTTTTGTCCATGGCCGTCTTTCTCAAGCTCTCTGTTCCACTGGTGGCTGATTTCCTCGTCTCTGAAATCCCTTCCATCTGGACGTGCTTCATCTCCTGGTTAAGACCTCCTTATCTCTACTTGGTTATTAATTGCATAATCATCAGTATTGTTGCCTCTTCTAAGCTCCAGCAGAAGCTGGAGGATGGGGAATCCGTGCTATCCGTTCCTGAGACGCTTGCTCCTCCGCCCCTCGCTAAGATCTCCTCTGAGTCTGACTATGTTGTTTGTGGCGGTACCGATATTTTGAATGGATACTGTTACAACAATGCGAATCAGAACGCCGTCACTAAGATTGCGGACCTTCAGATTGACGAATCGAATGGCGTGGAAGCCGTTGGGAGTTTCAAAACCGAAGAGGCAGGACACGCTGGAGAGCACGTGGAGGACAATAACGGAGGGGAGGTCAATGCCGTTAACGAGGCACTTGAGGAAGTCGGACACGTGGGAGTCACAGGGGCGAAGGGCCAACATGGCGGTGGATCCAGCGACGCCGCCTTCGAAGGTGATGACGAAGTCAGAGACGTTCAAGGACCGGAGCAACGTGGGGTCACCGAGTCCGTCGCCGGGGGGGTCGGGGAGGCTGAAGAGAGAACCGTCGCTGACCCAGGAGGAGTTGAACCGGCGAGTTGA

Protein sequence

MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRPPYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLAPPPLAKISSESDYVVCGGTDILNGYCYNNANQNAVTKIADLQIDESNGVEAVGSFKTEEAGHAGEHVEDNNGGEVNAVNEALEEVGHVGVTGAKGQHGGGSSDAAFEGDDEVRDVQGPEQRGVTESVAGGVGEAEERTVADPGGVEPAS
Homology
[Close]
BLAST of Cp4.1LG01g08440 vs. TrEMBL
Match: A0A0A0L2K5_CUCSA (Fiber expressed protein OS=Cucumis sativus GN=Csa_3G099710 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 3.1e-47
Identity = 107/147 (72.79%), Postives = 121/147 (82.31%), Query Frame = 1 

Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60
           MPILSSN  Y WILSLKI LISTG+LSMA+FLKLSVPL+ADF+ SEIPSIWT F+SWL P
Sbjct: 1   MPILSSN--YHWILSLKILLISTGLLSMALFLKLSVPLLADFVFSEIPSIWTSFLSWLTP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLAPPPLAKISSESDYVVCGGTDIL 120
           PYLYL+INCIIISIVASSKLQ  LE+      +PET APPP+ KIS  SDY VCG +DIL
Sbjct: 61  PYLYLLINCIIISIVASSKLQSNLEND----PIPETPAPPPVTKIS--SDYAVCGSSDIL 120

Query: 121 NGYCYNNANQNAVTKIADLQIDESNGV 148
           NGY   NANQN VTK++DL+ID+SN V
Sbjct: 121 NGYSSYNANQNVVTKVSDLEIDDSNEV 139

[Close]
BLAST of Cp4.1LG01g08440 vs. TrEMBL
Match: W9RGE1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018748 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 82/175 (46.86%), Postives = 107/175 (61.14%), Query Frame = 1 

Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60
           M + S+N +  WIL LK+ LISTGVLSMAV LKLSVP+V DF+ SE+PS W+  +SWL+P
Sbjct: 1   MAMYSANPSNNWILPLKVVLISTGVLSMAVALKLSVPVVVDFVASEVPSFWSFVLSWLKP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLED-GESVLSVPETLAPPPLAKISSESDYVVCGGTDI 120
           PYLY++IN IIISIVASSKL QKLED   S   V  T     ++     +DY V  G  +
Sbjct: 61  PYLYVLINGIIISIVASSKLHQKLEDPSTSPSHVAITAGEVKISGGEVRTDYAVYSGV-V 120

Query: 121 LNGYCYNN---ANQNAVTKIADLQIDESNGVEA-VGSFKTEEAGHAGEHVEDNNG 171
           L GY Y+    A  +A+T  + +    +  VEA V + + EE   A     + NG
Sbjct: 121 LTGYGYDPGEVAKVSAMTAESVVYAPAARVVEASVSAAEKEEREEAIVAASERNG 174

[Close]
BLAST of Cp4.1LG01g08440 vs. TrEMBL
Match: M5X0W3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007900mg PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22
Identity = 75/181 (41.44%), Postives = 113/181 (62.43%), Query Frame = 1 

Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60
           MP+ SSN+   W+LSLK+ LISTG++SMAV LKLS P+V+D + S++PS+W+  +SWLRP
Sbjct: 1   MPMSSSNT---WLLSLKVVLISTGLVSMAVALKLSAPVVSDIVASQVPSLWSSALSWLRP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGE-SVLSVPETLAPPPLAKISSESDYVVCGGTDI 120
           PYLY++INCIIISIVASSKL  + ED    +++VP  + P  ++     +DY       +
Sbjct: 61  PYLYILINCIIISIVASSKLHPRPEDSSPEIIAVPAPVTPVKISGEVVRTDYAAYDAV-V 120

Query: 121 LNGYCYNNANQNAVTKIADLQIDESNGVEAVGSFKTEEAGHAGEHVEDNNGGEVNAVNEA 180
           LN Y Y   + N + K+ D   + + GV  V   +  EA    +  + ++   V+  +EA
Sbjct: 121 LNEYGY---DANVLPKVPD-SYESAGGV--VVEARISEAAENEKKEKSDDREAVDGGDEA 171

[Close]
BLAST of Cp4.1LG01g08440 vs. TrEMBL
Match: F6H2E0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g03520 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.2e-21
Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 1 

Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60
           M ILS++S   W LSLK+ LISTGV+SMAV LK+SVP+V +F VSE+PSIW+  +SWLRP
Sbjct: 1   MAILSTDST-NWGLSLKVLLISTGVVSMAVALKISVPVVVEFAVSEVPSIWSFVLSWLRP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLAPPPLAKISSES----DYVV 114
           PYLYLVIN III IVASSKLQ K+E+            PP  A+I+  S    DY V
Sbjct: 61  PYLYLVINFIIIIIVASSKLQHKVEE------------PPETAEITISSAVAMDYAV 104

[Close]
BLAST of Cp4.1LG01g08440 vs. TrEMBL
Match: M1BP37_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400019285 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.4e-21
Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 1 

Query: 13  ILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRPPYLYLVINCIII 72
           +LS+KIFLIST VLS A+ LK+S P+V DF VSE+PSIW   +SWL+PPYLYLVINCIII
Sbjct: 12  MLSIKIFLISTTVLSAAIMLKVSAPVVTDFAVSEVPSIWNGVVSWLKPPYLYLVINCIII 71

Query: 73  SIVASSKLQQKLEDGESVLSVPETLAPPPLAKISSESD 111
           +IVASSKLQ KL++  S   VP  ++P  L++     D
Sbjct: 72  TIVASSKLQNKLDENSS--PVPAIVSPENLSQFHPIKD 107

[Close]
BLAST of Cp4.1LG01g08440 vs. TAIR10
Match: AT1G61260.1 (AT1G61260.1 Protein of unknown function (DUF761))

HSP 1 Score: 79.7 bits (195), Expect = 2.8e-15
Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 1 

Query: 12 WILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRPPYLYLVINCII 71
          W+++ K  LIS+GV ++A+ LKLSVP+  DF VS  P +W+  +SWL+PPYLY+V N II
Sbjct: 4  WMMTTKAVLISSGVATVALLLKLSVPVAVDFSVSRAPILWSSLLSWLKPPYLYVVTNGII 63

Query: 72 ISIVASSKLQQKLED 87
          I+IVASSK  +   D
Sbjct: 64 ITIVASSKYYRSHHD 78

[Close]
BLAST of Cp4.1LG01g08440 vs. TAIR10
Match: AT1G11220.1 (AT1G11220.1 Protein of unknown function (DUF761))

HSP 1 Score: 79.0 bits (193), Expect = 4.7e-15
Identity = 49/120 (40.83%), Postives = 75/120 (62.50%), Query Frame = 1 

Query: 13  ILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRPPYLYLVINCIII 72
           ++S+K  LI+ G++++++FLK SVP+  DF VS  P  W+ F+SWL+PPYL++ IN II 
Sbjct: 5   MISIKAALITAGIVAVSLFLKSSVPIAVDFSVSRFPIFWSSFLSWLKPPYLFVAINVIIT 64

Query: 73  SIVASSKLQQKL-----EDGESVL----SVPE--TLAPP-PLAKISSESDYVVCGGTDIL 121
            I+ASSK  Q +     ED E +L    ++P   T APP  L  + ++ D+V    + IL
Sbjct: 65  IIMASSKFYQSVGEQDGEDDEILLGGEYTIPNVITQAPPRRLVDLDADFDFVATVQSPIL 124

[Close]
BLAST of Cp4.1LG01g08440 vs. TAIR10
Match: AT5G54300.1 (AT5G54300.1 Protein of unknown function (DUF761))

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-09
Identity = 54/174 (31.03%), Postives = 88/174 (50.57%), Query Frame = 1 

Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60
           MP+L   S+++   ++ I     GV S+A  + L+VP V+ F+VS  P I+   +  L+P
Sbjct: 1   MPLLLPTSSFKTTATVVI----AGVSSIATAMILTVPSVSHFVVSCFPIIYDNTVFLLKP 60

Query: 61  PYLYLVINCIIISIVASSKLQQK---LEDGESVLSVPETLAPPPL---AKISSESDYVVC 120
           PYLYLVIN II+ I+A+SKL  K   ++D E    + E + P P+     + S+ D    
Sbjct: 61  PYLYLVINSIIVCIIATSKLTHKSSSVDDSE----ISEVVTPIPIPVPVHLPSDIDSGYL 120

Query: 121 GGTDILNGYCYNNANQNAVTKIADLQIDESNGVEAVGSFKTEEAGHAGEHVEDN 169
               +++ Y         V KI D+ I+ +  VEA+  F   +     +   D+
Sbjct: 121 NVVHVVSDY------TGFVEKIDDVSINPT--VEAIRKFPEVQEAEKSKESSDS 158

[Close]
BLAST of Cp4.1LG01g08440 vs. TAIR10
Match: AT1G11210.1 (AT1G11210.1 Protein of unknown function (DUF761))

HSP 1 Score: 55.5 bits (132), Expect = 5.6e-08
Identity = 30/65 (46.15%), Postives = 46/65 (70.77%), Query Frame = 1 

Query: 16 LKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRPPYLYLVINCIIISIV 75
          +K  LISTGV++ A+ LK+ VP+  DF  S+ P I + F++WL+PPYLY++ N III + 
Sbjct: 5  MKAVLISTGVVATAMHLKVIVPVAMDF--SQNPIILSSFLTWLKPPYLYVITNVIIIVVG 64

Query: 76 ASSKL 81
           S ++
Sbjct: 65 VSYRI 67

[Close]
BLAST of Cp4.1LG01g08440 vs. TAIR10
Match: AT1G11230.2 (AT1G11230.2 Protein of unknown function (DUF761))

HSP 1 Score: 54.7 bits (130), Expect = 9.5e-08
Identity = 28/72 (38.89%), Postives = 51/72 (70.83%), Query Frame = 1 

Query: 16 LKIFLISTGVLS-MAVFLKLSVPLVADFLVSEIPSIWTCFISWLRPPYLYLVINCIIISI 75
          +K  LISTG+++ M++FLK+ +P+   F +S   ++W+ F+ WL+PPYL++ +N +I  I
Sbjct: 7  IKAVLISTGIITAMSMFLKVFLPVTLYFSLS-FSTLWSSFLPWLKPPYLFVFVNVMITII 66

Query: 76 VASSKLQQKLED 87
          +ASS+  + + D
Sbjct: 67 IASSRYYRSIGD 77

[Close]
BLAST of Cp4.1LG01g08440 vs. NCBI nr
Match: gi|659102740|ref|XP_008452289.1| (PREDICTED: uncharacterized protein LOC103493359 [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 111/163 (68.10%), Postives = 129/163 (79.14%), Query Frame = 1 

Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60
           MPILSSN  Y WILSLKI  ISTGVLSMA+FLKLSVP+VADF++SEIPSIWT F+SWL P
Sbjct: 1   MPILSSN--YHWILSLKILFISTGVLSMALFLKLSVPVVADFVLSEIPSIWTSFLSWLTP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLAPPPLAKISSESDYVVCGGTDIL 120
           PYLYL+INCIIISIVASSKLQ KLE+      +PET APPP++KI   SDY VCGG+DIL
Sbjct: 61  PYLYLLINCIIISIVASSKLQSKLEND----PIPETPAPPPVSKI--PSDYAVCGGSDIL 120

Query: 121 NGYCYNNANQNAVTKIADLQIDESN----GVEAVGSFKTEEAG 160
           NGY   NANQN VTK++DL+ID+SN     +E    F+ E+ G
Sbjct: 121 NGYSSYNANQNVVTKVSDLEIDDSNELYGQIEESRVFEMEKKG 155

[Close]
BLAST of Cp4.1LG01g08440 vs. NCBI nr
Match: gi|778676267|ref|XP_004149308.2| (PREDICTED: uncharacterized protein LOC101210213 [Cucumis sativus])

HSP 1 Score: 196.8 bits (499), Expect = 4.4e-47
Identity = 107/147 (72.79%), Postives = 121/147 (82.31%), Query Frame = 1 

Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60
           MPILSSN  Y WILSLKI LISTG+LSMA+FLKLSVPL+ADF+ SEIPSIWT F+SWL P
Sbjct: 1   MPILSSN--YHWILSLKILLISTGLLSMALFLKLSVPLLADFVFSEIPSIWTSFLSWLTP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLAPPPLAKISSESDYVVCGGTDIL 120
           PYLYL+INCIIISIVASSKLQ  LE+      +PET APPP+ KIS  SDY VCG +DIL
Sbjct: 61  PYLYLLINCIIISIVASSKLQSNLEND----PIPETPAPPPVTKIS--SDYAVCGSSDIL 120

Query: 121 NGYCYNNANQNAVTKIADLQIDESNGV 148
           NGY   NANQN VTK++DL+ID+SN V
Sbjct: 121 NGYSSYNANQNVVTKVSDLEIDDSNEV 139

[Close]
BLAST of Cp4.1LG01g08440 vs. NCBI nr
Match: gi|694412555|ref|XP_009334589.1| (PREDICTED: uncharacterized protein LOC103927396 [Pyrus x bretschneideri])

HSP 1 Score: 125.2 bits (313), Expect = 1.6e-25
Identity = 87/180 (48.33%), Postives = 115/180 (63.89%), Query Frame = 1 

Query: 4   LSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRPPYL 63
           +S++S+  W+L+LK+ LISTGV+SMAV LKLS PLVAD ++S++PS+W+  ISWLRPPYL
Sbjct: 1   MSTSSSNTWLLTLKVALISTGVVSMAVGLKLSSPLVADAVISQVPSLWSSAISWLRPPYL 60

Query: 64  YLVINCIIISIVASSKLQQKLEDGESVLSVPETLAPPPLA--KISS--ESDYVVCGGTDI 123
           Y++INCIIISIVASSKL  K ED     + PE +  PPL   KIS+  +SDY    G  I
Sbjct: 61  YILINCIIISIVASSKLHPKPEDSHPE-TEPELVMVPPLTTEKISTQIQSDYAAYDGV-I 120

Query: 124 LNGYCYNNANQNAVTKIADLQIDESNGVEAVGSFKTEEAGHAGEHVEDN---NGGEVNAV 177
           L+ Y Y   + N + KI+D     + GV         EA    E  ED    +GG+ NA+
Sbjct: 121 LSEYGY---DANVLPKISDSYGGGTGGVVLEEKVWVPEAVKKKEKREDRAGIDGGDENAL 175

[Close]
BLAST of Cp4.1LG01g08440 vs. NCBI nr
Match: gi|657954187|ref|XP_008366538.1| (PREDICTED: uncharacterized protein LOC103430179 [Malus domestica])

HSP 1 Score: 122.1 bits (305), Expect = 1.4e-24
Identity = 86/180 (47.78%), Postives = 113/180 (62.78%), Query Frame = 1 

Query: 4   LSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRPPYL 63
           +S++S+  W+L+LK+ LISTGV+SMAV LKLS PLVAD + S++PS+W+  ISWLRPPYL
Sbjct: 1   MSTSSSNNWLLTLKVALISTGVVSMAVGLKLSSPLVADAVTSQVPSLWSSAISWLRPPYL 60

Query: 64  YLVINCIIISIVASSKLQQKLEDGESVLSVPETLAPPPLA--KISS--ESDYVVCGGTDI 123
           Y++INCIIISIVASSKL  K ED     + PE +  PPL   KIS+  +SDY    G  I
Sbjct: 61  YILINCIIISIVASSKLHPKPEDSHPE-TEPELVMVPPLTTEKISTQIQSDYAAYDGV-I 120

Query: 124 LNGYCYNNANQNAVTKIADLQIDESNGVEAVGSFKTEEAGHAGEHVEDN---NGGEVNAV 177
           L+ Y Y   + N + KI       + GV         EA    E+ ED    +GG+ NA+
Sbjct: 121 LSEYGY---DANVLPKIXXSYGGGTGGVVLEEKVWVSEAVKKKENREDRAAIDGGDENAL 175

[Close]
BLAST of Cp4.1LG01g08440 vs. NCBI nr
Match: gi|1009110661|ref|XP_015896755.1| (PREDICTED: uncharacterized protein LOC107430433 [Ziziphus jujuba])

HSP 1 Score: 120.2 bits (300), Expect = 5.2e-24
Identity = 96/239 (40.17%), Postives = 126/239 (52.72%), Query Frame = 1 

Query: 1   MPILSSNSNYQWILSLKIFLISTGVLSMAVFLKLSVPLVADFLVSEIPSIWTCFISWLRP 60
           M I SS S   W  SLK+ LISTGVLSMA  +KLSVP+V DF+ +E+PSIW+  +SWLRP
Sbjct: 1   MAIYSSTSTTNWTFSLKLLLISTGVLSMAFVMKLSVPVVTDFVATEVPSIWSVVLSWLRP 60

Query: 61  PYLYLVINCIIISIVASSKLQQKLEDGESVLSVPETLAPPPL----AKISS---ESDYVV 120
           PYLY++INCIIISIVASSKLQQK+E   +    PE + P P+     K+S     +DY  
Sbjct: 61  PYLYILINCIIISIVASSKLQQKVEYYPA--HPPEMVVPQPVVAEAVKVSGSDVRTDYAE 120

Query: 121 CGGTDILNGYCYNNANQNAVTKIADLQIDESNGVEAVGSFKTEEAGHAGEHVEDNNGGEV 180
             G  +L GY Y   + NA+ K+ D          AV       AG   + V D     +
Sbjct: 121 AYGGAVLTGYGY---DANAMAKVYD------GSSVAVADDVQRWAGVVEKTVSDVKEMVI 180

Query: 181 N--AVNEALEEVGHVGVTGAKGQHGGGSSDAAFEGDDEVRDVQG--PEQRGVTESVAGG 229
           N   V +  ++V  V  +  KG     S +  F   +E   V      ++ V  S  GG
Sbjct: 181 NDQTVAKGGDDVAVVSASVGKGLQRKDSLEVLFSNGNEKPPVSARFGHRKAVKASPEGG 228

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g08440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g08440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2K5_CUCSA3.1e-4772.79Fiber expressed protein OS=Cucumis sativus GN=Csa_3G099710 PE=4 SV=1[more]
W9RGE1_9ROSA1.1e-2346.86Uncharacterized protein OS=Morus notabilis GN=L484_018748 PE=4 SV=1[more]
M5X0W3_PRUPE1.2e-2241.44Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007900mg PE=4 SV=1[more]
F6H2E0_VITVI2.2e-2158.12Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g03520 PE=4 SV=... [more]
M1BP37_SOLTU6.4e-2160.20Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400019285 PE=4 SV=1[more]
BLAST of Cp4.1LG01g08440 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G61260.12.8e-1553.33 Protein of unknown function (DUF761)[more]
AT1G11220.14.7e-1540.83 Protein of unknown function (DUF761)[more]
AT5G54300.12.3e-0931.03 Protein of unknown function (DUF761)[more]
AT1G11210.15.6e-0846.15 Protein of unknown function (DUF761)[more]
AT1G11230.29.5e-0838.89 Protein of unknown function (DUF761)[more]
BLAST of Cp4.1LG01g08440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102740|ref|XP_008452289.1|1.2e-4768.10PREDICTED: uncharacterized protein LOC103493359 [Cucumis melo][more]
gi|778676267|ref|XP_004149308.2|4.4e-4772.79PREDICTED: uncharacterized protein LOC101210213 [Cucumis sativus][more]
gi|694412555|ref|XP_009334589.1|1.6e-2548.33PREDICTED: uncharacterized protein LOC103927396 [Pyrus x bretschneideri][more]
gi|657954187|ref|XP_008366538.1|1.4e-2447.78PREDICTED: uncharacterized protein LOC103430179 [Malus domestica][more]
gi|1009110661|ref|XP_015896755.1|5.2e-2440.17PREDICTED: uncharacterized protein LOC107430433 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025520DUF4408
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g08440.1Cp4.1LG01g08440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025520Domain of unknown function DUF4408PFAMPF14364DUF4408coord: 48..80
score: 7.6
NoneNo IPR availablePANTHERPTHR33098FAMILY NOT NAMEDcoord: 12..90
score: 6.2
NoneNo IPR availablePANTHERPTHR33098:SF11COTTON FIBER EXPRESSED PROTEIN 1-LIKE PROTEINcoord: 12..90
score: 6.2