Cp4.1LG01g08260 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g08260
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSpindle pole body component protein
LocationCp4.1LG01 : 5022536 .. 5023823 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACGTCACTATAGTAGGAAAAGAAAAGGGTAAGTGAAAATGTCTAAAATGCCCATGCAATTCTGATTTCAACCATGGGGATGAAGGGTGTTTTGGTAATTAAGTATAAACAAGTACAAATGTAAACACCAGAAAATCAATACCCGACTGTTTCTATAAATTGATAACCAAGTCCGCTCAACCGCTGCCACGGGTTGCCGTAATTCTACGACGGACGACGGAGTAGAATATGGACTGCCGCCGTATTAGTCAATGGTAGTGATTATAAGAGATTTGCTCTTTAAGCTCGCCTCTTCCTTGGCATCGGATCGGAGCTGCTGTTCTCGTTCCGATCACTCTCCTTCTGCCTAGAGGCTCGACAGGAGCGGTTTAGTGTCCGATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTTAGCGTGTCGCGCATGGAGAATCCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGATCACCACCAGAATACAACGGCGTAGAAGACGAGGCGCGCTGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTAGGAGCGATCTCGGAGGATAATGTAGTTCTGGTAGTGATGGAGAGAAAGAAGAGCGAGGATCGGACGGCGGAATCAGAGCGATCCGTGAAGAGGAAGAGCGGATCTCGAAATGGAAAGGCAAGAGGAGTTCACGGACGTAACAACAGCAACGATTTTAGGTACGTACGTTTGTCAGTTCGTGAATCTTCCGTATCATTATCGAAATCGTAACGATCTGTGAAATGAAAACGACGTCTGGAAAGAATCTTTTTGTTATTTTATTTTTTATTTTTTATTTTTTCCTCTCTCTCTCTCTCAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGATGCAATTCTGCTTCGATTATCCGATCACTCAGGCTTGTGTAATATTAGTGCATATTTGCATAACTCAATTGCATCGTAATAATGATTTGTATAATCAATAAAAAATTGAATAGAGAAAGGTGAGGTTGAGGAGGAAACTTATCCCTGGAATTGTAGCTTGTTGGTTCAACTGCCCTCTGCAATTTTAAATCTTCCCATTTCTACATGATCGATGCTTTGTTCTCTTTTGTTCTTAGATTCAACTTAGGGCAACAATAATCTGTTTATTTATTGATTGATTGAGTGAATATTCCTACCCAATTGTTGGAGAAAGATCAACTTGGTTCTTGAAGTTTGATTTCTAATAA

mRNA sequence

CACGTCACTATAGTAGGAAAAGAAAAGGGTAAGTGAAAATGTCTAAAATGCCCATGCAATTCTGATTTCAACCATGGGGATGAAGGGTGTTTTGGTAATTAAGTATAAACAAGTACAAATGTAAACACCAGAAAATCAATACCCGACTGTTTCTATAAATTGATAACCAAGTCCGCTCAACCGCTGCCACGGGTTGCCGTAATTCTACGACGGACGACGGAGTAGAATATGGACTGCCGCCGTATTAGTCAATGGTAGTGATTATAAGAGATTTGCTCTTTAAGCTCGCCTCTTCCTTGGCATCGGATCGGAGCTGCTGTTCTCGTTCCGATCACTCTCCTTCTGCCTAGAGGCTCGACAGGAGCGGTTTAGTGTCCGATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTTAGCGTGTCGCGCATGGAGAATCCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGATCACCACCAGAATACAACGGCGTAGAAGACGAGGCGCGCTGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTAGGAGCGATCTCGGAGGATAATGTAGTTCTGGTAGTGATGGAGAGAAAGAAGAGCGAGGATCGGACGGCGGAATCAGAGCGATCCGTGAAGAGGAAGAGCGGATCTCGAAATGGAAAGGCAAGAGGAGTTCACGGACGTAACAACAGCAACGATTTTAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGATGCAATTCTGCTTCGATTATCCGATCACTCAGGCTTGTGTAATATTAGTGCATATTTGCATAACTCAATTGCATCGTAATAATGATTTGTATAATCAATAAAAAATTGAATAGAGAAAGGTGAGGTTGAGGAGGAAACTTATCCCTGGAATTGTAGCTTGTTGGTTCAACTGCCCTCTGCAATTTTAAATCTTCCCATTTCTACATGATCGATGCTTTGTTCTCTTTTGTTCTTAGATTCAACTTAGGGCAACAATAATCTGTTTATTTATTGATTGATTGAGTGAATATTCCTACCCAATTGTTGGAGAAAGATCAACTTGGTTCTTGAAGTTTGATTTCTAATAA

Coding sequence (CDS)

ATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTTAGCGTGTCGCGCATGGAGAATCCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGATCACCACCAGAATACAACGGCGTAGAAGACGAGGCGCGCTGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTAGGAGCGATCTCGGAGGATAATGTAGTTCTGGTAGTGATGGAGAGAAAGAAGAGCGAGGATCGGACGGCGGAATCAGAGCGATCCGTGAAGAGGAAGAGCGGATCTCGAAATGGAAAGGCAAGAGGAGTTCACGGACGTAACAACAGCAACGATTTTAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGA

Protein sequence

MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
Homology
[Close]
BLAST of Cp4.1LG01g08260 vs. TrEMBL
Match: A0A0A0L6G1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G094500 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.9e-47
Identity = 106/143 (74.13%), Postives = 124/143 (86.71%), Query Frame = 1 

Query: 1   MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAA-KM 60
           MKFL EFVSCCVPV++SR++NPE TEA G++E+RSL PITTR  RRR+R AL  SAA K+
Sbjct: 1   MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKL 60

Query: 61  AGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDF 120
           A DW PSLGAISED VVLVVMER+KS+++T E ERSVKRKS SR+G++RGVHGRNNSNDF
Sbjct: 61  AADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRKSRSRDGESRGVHGRNNSNDF 120

Query: 121 --RRSPAAIPVVIPAFSPTPFLF 141
             R+SP+AIPVVIPAFSP PFLF
Sbjct: 121 SLRQSPSAIPVVIPAFSPAPFLF 143

[Close]
BLAST of Cp4.1LG01g08260 vs. TrEMBL
Match: M5WVR1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013389mg PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.6e-13
Identity = 63/142 (44.37%), Postives = 84/142 (59.15%), Query Frame = 1 

Query: 1   MKFLPEFVSCCVPVSVSRMENPEAT--EAPGAEEIRSLAPITTRIQRRRRRGALYTSAAK 60
           MKFL EFVSCC    ++R   P  T  +AP +EE  SL P   R +R+R R     S + 
Sbjct: 1   MKFLLEFVSCC---GIAR---PATTGEQAPLSEETSSLVPRRMRRRRKRGRPGNSGSTSP 60

Query: 61  MAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSND 120
            + +W PSL +ISEDNVV +V+      DRTAE ER++KRKSG     A+    R++  D
Sbjct: 61  NSVEWRPSLTSISEDNVVAMVV------DRTAEVERAMKRKSGQSRTIAQ---VRSHGED 120

Query: 121 FRRSPAAIPVVIPAFSPTPFLF 141
           +    A++   IPAFSPTPF+F
Sbjct: 121 Y--GQASLTTAIPAFSPTPFMF 125

[Close]
BLAST of Cp4.1LG01g08260 vs. TrEMBL
Match: W9QQS7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021141 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.8e-13
Identity = 70/149 (46.98%), Postives = 92/149 (61.74%), Query Frame = 1 

Query: 1   MKFLPEFVSCCVPVSVS--RMENPEATEA-PGAEEIRSLAPITTRIQRRRRRGALYTS-A 60
           M+FL  FVSCC P  +   R E+ +++ A P AEE RSL   + R +RR +RG L  S +
Sbjct: 1   MRFLV-FVSCCGPTVMPAVRPESSQSSSATPPAEETRSLVR-SRRYRRRPKRGRLGASGS 60

Query: 61  AKMAGDWTPSLGAISEDNVVLVVMERKKSED-----RTAESERSVKRKSGSRNGKARGVH 120
           A +  +W PSL +ISEDNVV+V  ER   +D     RTA  ER VKRKSGS + +   V 
Sbjct: 61  APVPVEWKPSLCSISEDNVVMV--ERSDGQDRQDQYRTAGPERLVKRKSGSGSSRMNVV- 120

Query: 121 GRNNSNDFRRSPAAIPVVIPAFSPTPFLF 141
             +  +D+ RS  + P VIPAFSPTPF+F
Sbjct: 121 -ASFGDDYGRS--SFPTVIPAFSPTPFMF 141

[Close]
BLAST of Cp4.1LG01g08260 vs. TrEMBL
Match: V4US81_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009866mg PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.4e-11
Identity = 63/147 (42.86%), Postives = 83/147 (56.46%), Query Frame = 1 

Query: 1   MKFLPEFVSCC-VPVSVSRMENPEAT----EAPGAEEIRSLAPITTRIQRRRRRGALYTS 60
           M+FL E VSCC    S     +   T    E+P +E  R L P++ R  RRRRRG     
Sbjct: 1   MRFLLELVSCCGCQESFCGGGDGGGTSPVPESPSSESSR-LVPVSRRSFRRRRRGRTAGG 60

Query: 61  --AAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGR 120
               + +G+W PSL AISEDNVV+        E +T++S+ +VKRKSGS   K   +  R
Sbjct: 61  DFGGRSSGEWKPSLFAISEDNVVI--------ERQTSDSDGAVKRKSGS--FKPDKIRLR 120

Query: 121 NNSNDFRRSPAAIPVVIPAFSPTPFLF 141
             S DF +S  ++P  IPAFSPTPF+F
Sbjct: 121 TFSKDFGQS--SMPTFIPAFSPTPFMF 134

[Close]
BLAST of Cp4.1LG01g08260 vs. TrEMBL
Match: A0A0D2U0X6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G428800 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.8e-11
Identity = 61/142 (42.96%), Postives = 81/142 (57.04%), Query Frame = 1 

Query: 1   MKFLPEFVSCCVP-VSVSRMENPEATEAPGAEEIRS-LAPITTRIQRRRRRGALYTSAAK 60
           M+   +FVS CV    VS  E    T APG EE RS +AP    ++++++R  + T  + 
Sbjct: 1   MRSFLKFVSRCVKNPEVSTTEEVVVT-APGREETRSFMAPKMVALKKKKKRVKVGTPFST 60

Query: 61  MAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSND 120
              DW PSL  ISEDNV+    E+   E  T  ++R+VKRKSG   G    VH R+ S+D
Sbjct: 61  TP-DWKPSLYVISEDNVLAEKREKITPEASTTPADRAVKRKSGV--GSRSKVHVRSYSDD 120

Query: 121 FRRSPAAIPVVIPAFSPTPFLF 141
             R+    PVVIP FSPTPF+F
Sbjct: 121 IGRNQE--PVVIPTFSPTPFMF 136

[Close]
BLAST of Cp4.1LG01g08260 vs. TAIR10
Match: AT5G54585.1 (AT5G54585.1 unknown protein)

HSP 1 Score: 54.7 bits (130), Expect = 5.4e-08
Identity = 47/145 (32.41%), Postives = 67/145 (46.21%), Query Frame = 1 

Query: 1   MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
           MKFL E V  C      +       +   ++E ++L       QRRRR+           
Sbjct: 1   MKFLLELVVPCFGSQQFQESAASTADDSVSDETQTLMK-----QRRRRKRVRVAGQPGQV 60

Query: 61  GDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKS-----GSRNGKARGVHGRNN 120
            +W PSL  ISE+   +  +  K  E      ++ V+RKS     G  + ++ G H R  
Sbjct: 61  AEWRPSLSVISENKPAITKISEKNEE------KKKVRRKSEGNGGGDASSRSGGGHIRFR 120

Query: 121 SNDFRRSPAAIPVVIPAFSPTPFLF 141
           S+DF R+  A   VIPAFSPTPF+F
Sbjct: 121 SDDFGRN--AFEPVIPAFSPTPFMF 132

[Close]
BLAST of Cp4.1LG01g08260 vs. NCBI nr
Match: gi|778676197|ref|XP_004149939.2| (PREDICTED: uncharacterized protein LOC101213465 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 4.2e-47
Identity = 106/143 (74.13%), Postives = 124/143 (86.71%), Query Frame = 1 

Query: 1   MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAA-KM 60
           MKFL EFVSCCVPV++SR++NPE TEA G++E+RSL PITTR  RRR+R AL  SAA K+
Sbjct: 1   MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKL 60

Query: 61  AGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDF 120
           A DW PSLGAISED VVLVVMER+KS+++T E ERSVKRKS SR+G++RGVHGRNNSNDF
Sbjct: 61  AADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRKSRSRDGESRGVHGRNNSNDF 120

Query: 121 --RRSPAAIPVVIPAFSPTPFLF 141
             R+SP+AIPVVIPAFSP PFLF
Sbjct: 121 SLRQSPSAIPVVIPAFSPAPFLF 143

[Close]
BLAST of Cp4.1LG01g08260 vs. NCBI nr
Match: gi|659102830|ref|XP_008452335.1| (PREDICTED: uncharacterized protein LOC103493394 [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 4.0e-45
Identity = 105/143 (73.43%), Postives = 123/143 (86.01%), Query Frame = 1 

Query: 1   MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAA-KM 60
           MKFL EFVSCCVPV++SR+ENPE TEA  ++E+R+LAPITTR  RRR+R AL  SAA K+
Sbjct: 1   MKFLFEFVSCCVPVNMSRIENPEETEAAASKEMRTLAPITTRKHRRRKRSALLPSAAAKL 60

Query: 61  AGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDF 120
           A DW PSLGAISED VVLVVMER+KS+D+ AE ERSVKRKSGSR+G++R VHGR NSNDF
Sbjct: 61  AADWKPSLGAISEDKVVLVVMEREKSDDQAAELERSVKRKSGSRDGESR-VHGRKNSNDF 120

Query: 121 --RRSPAAIPVVIPAFSPTPFLF 141
             R++P+AIPVVIPAFSP PFLF
Sbjct: 121 SLRQNPSAIPVVIPAFSPAPFLF 142

[Close]
BLAST of Cp4.1LG01g08260 vs. NCBI nr
Match: gi|658061229|ref|XP_008366475.1| (PREDICTED: uncharacterized protein LOC103430120 [Malus domestica])

HSP 1 Score: 85.5 bits (210), Expect = 8.1e-14
Identity = 65/141 (46.10%), Postives = 81/141 (57.45%), Query Frame = 1 

Query: 1   MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIQRRRR-RGALYTSAAKM 60
           MKFL EFV CC     +R     +  AP +EE RSL    +RI RRRR RG+   S+   
Sbjct: 1   MKFLLEFVPCC---GATRPTTSNSEPAPLSEETRSLVRAPSRILRRRRKRGSSVNSS--- 60

Query: 61  AGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDF 120
             DWTPSL +ISEDNV   V+      DRTA  ER+VKRKSG    +   V  R++  D+
Sbjct: 61  --DWTPSLSSISEDNVAAKVV------DRTAAIERAVKRKSGQDRTR---VQVRSHGEDY 120

Query: 121 RRSPAAIPVVIPAFSPTPFLF 141
            ++  A    IPAFSPTPF+F
Sbjct: 121 GQASFA----IPAFSPTPFMF 120

[Close]
BLAST of Cp4.1LG01g08260 vs. NCBI nr
Match: gi|595877258|ref|XP_007212234.1| (hypothetical protein PRUPE_ppa013389mg [Prunus persica])

HSP 1 Score: 82.8 bits (203), Expect = 5.2e-13
Identity = 63/142 (44.37%), Postives = 84/142 (59.15%), Query Frame = 1 

Query: 1   MKFLPEFVSCCVPVSVSRMENPEAT--EAPGAEEIRSLAPITTRIQRRRRRGALYTSAAK 60
           MKFL EFVSCC    ++R   P  T  +AP +EE  SL P   R +R+R R     S + 
Sbjct: 1   MKFLLEFVSCC---GIAR---PATTGEQAPLSEETSSLVPRRMRRRRKRGRPGNSGSTSP 60

Query: 61  MAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSND 120
            + +W PSL +ISEDNVV +V+      DRTAE ER++KRKSG     A+    R++  D
Sbjct: 61  NSVEWRPSLTSISEDNVVAMVV------DRTAEVERAMKRKSGQSRTIAQ---VRSHGED 120

Query: 121 FRRSPAAIPVVIPAFSPTPFLF 141
           +    A++   IPAFSPTPF+F
Sbjct: 121 Y--GQASLTTAIPAFSPTPFMF 125

[Close]
BLAST of Cp4.1LG01g08260 vs. NCBI nr
Match: gi|694329610|ref|XP_009355561.1| (PREDICTED: uncharacterized protein LOC103946564 [Pyrus x bretschneideri])

HSP 1 Score: 82.4 bits (202), Expect = 6.8e-13
Identity = 64/141 (45.39%), Postives = 79/141 (56.03%), Query Frame = 1 

Query: 1   MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIQRRRR-RGALYTSAAKM 60
           MKFL EFV CC     +R     +  AP +EE RSL    +RI RRRR RG+   S+   
Sbjct: 1   MKFLLEFVPCC---GATRPTTSNSEPAPLSEETRSLVRAPSRILRRRRKRGSSVNSS--- 60

Query: 61  AGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDF 120
             DWTPSL +ISEDNV   V+      DRTA  ER+VKRKS     +   V  R++  D+
Sbjct: 61  --DWTPSLSSISEDNVAAKVV------DRTAAIERAVKRKSDQDRTR---VQVRSHGEDY 120

Query: 121 RRSPAAIPVVIPAFSPTPFLF 141
             +  A    IPAFSPTPF+F
Sbjct: 121 GEASFA----IPAFSPTPFMF 120

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g08260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g08260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6G1_CUCSA2.9e-4774.13Uncharacterized protein OS=Cucumis sativus GN=Csa_3G094500 PE=4 SV=1[more]
M5WVR1_PRUPE3.6e-1344.37Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013389mg PE=4 SV=1[more]
W9QQS7_9ROSA4.8e-1346.98Uncharacterized protein OS=Morus notabilis GN=L484_021141 PE=4 SV=1[more]
V4US81_9ROSI3.4e-1142.86Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009866mg PE=4 SV=1[more]
A0A0D2U0X6_GOSRA5.8e-1142.96Uncharacterized protein OS=Gossypium raimondii GN=B456_009G428800 PE=4 SV=1[more]
BLAST of Cp4.1LG01g08260 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G54585.15.4e-0832.41 unknown protein[more]
BLAST of Cp4.1LG01g08260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778676197|ref|XP_004149939.2|4.2e-4774.13PREDICTED: uncharacterized protein LOC101213465 [Cucumis sativus][more]
gi|659102830|ref|XP_008452335.1|4.0e-4573.43PREDICTED: uncharacterized protein LOC103493394 [Cucumis melo][more]
gi|658061229|ref|XP_008366475.1|8.1e-1446.10PREDICTED: uncharacterized protein LOC103430120 [Malus domestica][more]
gi|595877258|ref|XP_007212234.1|5.2e-1344.37hypothetical protein PRUPE_ppa013389mg [Prunus persica][more]
gi|694329610|ref|XP_009355561.1|6.8e-1345.39PREDICTED: uncharacterized protein LOC103946564 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g08260.1Cp4.1LG01g08260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35318FAMILY NOT NAMEDcoord: 2..140
score: 3.8
NoneNo IPR availablePANTHERPTHR35318:SF2SUBFAMILY NOT NAMEDcoord: 2..140
score: 3.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g08260CmaCh04G009340Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g08260CmoCh04G010030Cucurbita moschata (Rifu)cmocpeB673
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g08260Wax gourdcpewgoB0484
Cp4.1LG01g08260Cucurbita pepo (Zucchini)cpecpeB007
Cp4.1LG01g08260Cucumber (Gy14) v1cgycpeB0077
Cp4.1LG01g08260Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g08260Cucurbita moschata (Rifu)cmocpeB312
Cp4.1LG01g08260Cucurbita moschata (Rifu)cmocpeB317
Cp4.1LG01g08260Wild cucumber (PI 183967)cpecpiB392
Cp4.1LG01g08260Cucumber (Chinese Long) v2cpecuB393
Cp4.1LG01g08260Bottle gourd (USVL1VR-Ls)cpelsiB368
Cp4.1LG01g08260Bottle gourd (USVL1VR-Ls)cpelsiB370
Cp4.1LG01g08260Watermelon (Charleston Gray)cpewcgB349
Cp4.1LG01g08260Watermelon (97103) v1cpewmB386
Cp4.1LG01g08260Melon (DHL92) v3.5.1cpemeB409
Cp4.1LG01g08260Melon (DHL92) v3.5.1cpemeB413
Cp4.1LG01g08260Cucumber (Gy14) v2cgybcpeB369
Cp4.1LG01g08260Melon (DHL92) v3.6.1cpemedB484
Cp4.1LG01g08260Silver-seed gourdcarcpeB0938
Cp4.1LG01g08260Silver-seed gourdcarcpeB1110
Cp4.1LG01g08260Cucumber (Chinese Long) v3cpecucB0491