CmaCh04G009340 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGGTTGCCGTGATTCTACGACGGACGACGGAGTAGAATATGGACTGCCGCCGTATTAGTCAATGGTAGTGATTATAAGAGATTTGCTCTTTAAGCTCGCCTCCTTCTTGGCATCGGATCGGAGCTGCTGTTCTCTTTCCGATCACTCTCCTTCTGCCTAGAGACTCGACAGGAGCGGTTTAGTGTCCGATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTGAGCGTGTCGCGCATGGAGAATCCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGGTCACCACCAGAATACACCTGCGTAGAAGACGAGGTGCGCCGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTAGGAGCGATCTCGGAGGATAATGTAGTTCTAGTAGTGATGGAGAGAAAGAAGAGCGAGGATCGGACGGCGGAATCAGAGCGATCTGTGAAGAGGAAGAGCGGATCTCGAAATGGAAAGGCAAGAGGAGTTCACGGACGTAACAACAGCAACGATTTTAGGTACGTACGTATGTCAGTTCGTGAATCTTCGGTATCATTATCGAAATCGTAACGATCTGTGAAATGAAAACGACGTCTGGAAAGAATCTTTTTGTTAATTTTCTCTCTCTCAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGATGCAATTCTGCTTCGATTATCCGATCACTCAGGCTCGTGTAATATATGTGCATATTTGCATAACTCAATTGCATCGTAATAATGATTTGTATAATCAATAAAAAAATTGATTAGAAAAAGGTGAGGTTGAGGAGGAAACTTATCCCTGGAATTGTAGCTTGTTGGTTCAACTGCTCTCTGCAATTTTAAATCTTCCCATTTCTAC CGGGTTGCCGTGATTCTACGACGGACGACGGAGTAGAATATGGACTGCCGCCGTATTAGTCAATGGTAGTGATTATAAGAGATTTGCTCTTTAAGCTCGCCTCCTTCTTGGCATCGGATCGGAGCTGCTGTTCTCTTTCCGATCACTCTCCTTCTGCCTAGAGACTCGACAGGAGCGGTTTAGTGTCCGATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTGAGCGTGTCGCGCATGGAGAATCCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGGTCACCACCAGAATACACCTGCGTAGAAGACGAGGTGCGCCGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTAGGAGCGATCTCGGAGGATAATGTAGTTCTAGTAGTGATGGAGAGAAAGAAGAGCGAGGATCGGACGGCGGAATCAGAGCGATCTGTGAAGAGGAAGAGCGGATCTCGAAATGGAAAGGCAAGAGGAGTTCACGGACGTAACAACAGCAACGATTTTAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGATGCAATTCTGCTTCGATTATCCGATCACTCAGGCTCGTGTAATATATGTGCATATTTGCATAACTCAATTGCATCGTAATAATGATTTGTATAATCAATAAAAAAATTGATTAGAAAAAGGTGAGGTTGAGGAGGAAACTTATCCCTGGAATTGTAGCTTGTTGGTTCAACTGCTCTCTGCAATTTTAAATCTTCCCATTTCTAC ATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTGAGCGTGTCGCGCATGGAGAATCCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGGTCACCACCAGAATACACCTGCGTAGAAGACGAGGTGCGCCGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTAGGAGCGATCTCGGAGGATAATGTAGTTCTAGTAGTGATGGAGAGAAAGAAGAGCGAGGATCGGACGGCGGAATCAGAGCGATCTGTGAAGAGGAAGAGCGGATCTCGAAATGGAAAGGCAAGAGGAGTTCACGGACGTAACAACAGCAACGATTTTAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGA MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPVTTRIHLRRRRGAPYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
BLAST of CmaCh04G009340 vs. TrEMBL
Match: A0A0A0L6G1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G094500 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.1e-46 Identity = 104/143 (72.73%), Postives = 123/143 (86.01%), Query Frame = 1
BLAST of CmaCh04G009340 vs. TrEMBL
Match: M5WVR1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013389mg PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.3e-13 Identity = 65/144 (45.14%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of CmaCh04G009340 vs. TrEMBL
Match: W9QQS7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021141 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.5e-11 Identity = 68/149 (45.64%), Postives = 89/149 (59.73%), Query Frame = 1
BLAST of CmaCh04G009340 vs. TrEMBL
Match: A0A0D2U0X6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G428800 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.6e-11 Identity = 62/145 (42.76%), Postives = 81/145 (55.86%), Query Frame = 1
BLAST of CmaCh04G009340 vs. TrEMBL
Match: V4US81_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009866mg PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.4e-11 Identity = 64/147 (43.54%), Postives = 83/147 (56.46%), Query Frame = 1
BLAST of CmaCh04G009340 vs. TAIR10
Match: AT5G54585.1 (AT5G54585.1 unknown protein) HSP 1 Score: 51.2 bits (121), Expect = 5.9e-07 Identity = 47/145 (32.41%), Postives = 66/145 (45.52%), Query Frame = 1
BLAST of CmaCh04G009340 vs. NCBI nr
Match: gi|778676197|ref|XP_004149939.2| (PREDICTED: uncharacterized protein LOC101213465 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 1.6e-46 Identity = 104/143 (72.73%), Postives = 123/143 (86.01%), Query Frame = 1
BLAST of CmaCh04G009340 vs. NCBI nr
Match: gi|659102830|ref|XP_008452335.1| (PREDICTED: uncharacterized protein LOC103493394 [Cucumis melo]) HSP 1 Score: 188.0 bits (476), Expect = 1.2e-44 Identity = 103/143 (72.03%), Postives = 122/143 (85.31%), Query Frame = 1
BLAST of CmaCh04G009340 vs. NCBI nr
Match: gi|595877258|ref|XP_007212234.1| (hypothetical protein PRUPE_ppa013389mg [Prunus persica]) HSP 1 Score: 84.3 bits (207), Expect = 1.8e-13 Identity = 65/144 (45.14%), Postives = 85/144 (59.03%), Query Frame = 1
BLAST of CmaCh04G009340 vs. NCBI nr
Match: gi|658061229|ref|XP_008366475.1| (PREDICTED: uncharacterized protein LOC103430120 [Malus domestica]) HSP 1 Score: 84.0 bits (206), Expect = 2.3e-13 Identity = 64/141 (45.39%), Postives = 80/141 (56.74%), Query Frame = 1
BLAST of CmaCh04G009340 vs. NCBI nr
Match: gi|694329610|ref|XP_009355561.1| (PREDICTED: uncharacterized protein LOC103946564 [Pyrus x bretschneideri]) HSP 1 Score: 80.9 bits (198), Expect = 2.0e-12 Identity = 63/141 (44.68%), Postives = 78/141 (55.32%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |