Cp4.1LG01g08160 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g08160
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin-conjugating enzyme, putative
LocationCp4.1LG01 : 5087384 .. 5088340 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGATCTTAGTTCAAAACAAGTTCCTATTGAGCTCCAAAACACATGTTAGCCTGTGGAGCCCTGCGATTCCACGCAAATTTGTCTGCTGCATAGCCAATACCACAGTCAATGTTGCTGCTGCTACCACCGCCGCCGCCAAACCCAAGCACGGTGATGGCCAACTAGTCATTGAACGAGAGCCTTTATCTCCTACTACACCTGTATTGCCCAATTCCTCCACCTATTATTCTGTTCTTAATGATCCGAGTTTACAATCGACCTGGAGTCATCGTGTGTGGGTGACAAGTGGGTGCACCATAGTGCTAATCTCTTTAGCAAAATCAATAGCAGGTGCAGCCAGTTCACATACCTGGCTTGAGCCTGCTTTAGCAGCATTGGTAGGCTACATTTTAGCTGACCTTGGATCTGGGGTTTACCATTGGGGCATCGATAACTATGGCGACGCCTCAACTCCAATTTTTGGCACCCAAATAGAAGCATTCCAAGGCCATCATAAGCGGCCATGGACAATCACAAAGCGTCAGTTTGCCAACAATCTGTATGCTTTGGCACGAGCTGTGACTTTCACTGTACTTCCTATAACCCTTGCATCTAATGACCCTATTCTACATGGTTTGGTTGCCGTATGCTCAGGCTGTATAATGTTCAGCCAACAGTTCCATGCATGGGCTCACGACAAAAAGAGTCAACTACCACCACTCGTAGTAGCAATGCAAGATGCTGGCCTGCTAGTGTCGCGATTGCAGCATTCTGCACATCATCGTCCACCCTATAACAACAACTACTGCATAGTAAGCGGAATTTGGAATAAGCTTTTAGATGAAACAAAGGTTTTTGAGGCGTTAGAGATGATCCTGTTCTTCAAGCTTGGGGTGAGACCAAGATCTTGGACCGAGCCTCATTCTGAATGGACAGAAGAGACTGAGATTATAGAACAAACTACAGCGTATTAA

mRNA sequence

ATGTCGATCTTAGTTCAAAACAAGTTCCTATTGAGCTCCAAAACACATGTTAGCCTGTGGAGCCCTGCGATTCCACGCAAATTTGTCTGCTGCATAGCCAATACCACAGTCAATGTTGCTGCTGCTACCACCGCCGCCGCCAAACCCAAGCACGGTGATGGCCAACTAGTCATTGAACGAGAGCCTTTATCTCCTACTACACCTGTATTGCCCAATTCCTCCACCTATTATTCTGTTCTTAATGATCCGAGTTTACAATCGACCTGGAGTCATCGTGTGTGGGTGACAAGTGGGTGCACCATAGTGCTAATCTCTTTAGCAAAATCAATAGCAGGTGCAGCCAGTTCACATACCTGGCTTGAGCCTGCTTTAGCAGCATTGGTAGGCTACATTTTAGCTGACCTTGGATCTGGGGTTTACCATTGGGGCATCGATAACTATGGCGACGCCTCAACTCCAATTTTTGGCACCCAAATAGAAGCATTCCAAGGCCATCATAAGCGGCCATGGACAATCACAAAGCGTCAGTTTGCCAACAATCTGTATGCTTTGGCACGAGCTGTGACTTTCACTGTACTTCCTATAACCCTTGCATCTAATGACCCTATTCTACATGGTTTGGTTGCCGTATGCTCAGGCTGTATAATGTTCAGCCAACAGTTCCATGCATGGGCTCACGACAAAAAGAGTCAACTACCACCACTCGTAGTAGCAATGCAAGATGCTGGCCTGCTAGTGTCGCGATTGCAGCATTCTGCACATCATCGTCCACCCTATAACAACAACTACTGCATAGTAAGCGGAATTTGGAATAAGCTTTTAGATGAAACAAAGGTTTTTGAGGCGTTAGAGATGATCCTGTTCTTCAAGCTTGGGGTGAGACCAAGATCTTGGACCGAGCCTCATTCTGAATGGACAGAAGAGACTGAGATTATAGAACAAACTACAGCGTATTAA

Coding sequence (CDS)

ATGTCGATCTTAGTTCAAAACAAGTTCCTATTGAGCTCCAAAACACATGTTAGCCTGTGGAGCCCTGCGATTCCACGCAAATTTGTCTGCTGCATAGCCAATACCACAGTCAATGTTGCTGCTGCTACCACCGCCGCCGCCAAACCCAAGCACGGTGATGGCCAACTAGTCATTGAACGAGAGCCTTTATCTCCTACTACACCTGTATTGCCCAATTCCTCCACCTATTATTCTGTTCTTAATGATCCGAGTTTACAATCGACCTGGAGTCATCGTGTGTGGGTGACAAGTGGGTGCACCATAGTGCTAATCTCTTTAGCAAAATCAATAGCAGGTGCAGCCAGTTCACATACCTGGCTTGAGCCTGCTTTAGCAGCATTGGTAGGCTACATTTTAGCTGACCTTGGATCTGGGGTTTACCATTGGGGCATCGATAACTATGGCGACGCCTCAACTCCAATTTTTGGCACCCAAATAGAAGCATTCCAAGGCCATCATAAGCGGCCATGGACAATCACAAAGCGTCAGTTTGCCAACAATCTGTATGCTTTGGCACGAGCTGTGACTTTCACTGTACTTCCTATAACCCTTGCATCTAATGACCCTATTCTACATGGTTTGGTTGCCGTATGCTCAGGCTGTATAATGTTCAGCCAACAGTTCCATGCATGGGCTCACGACAAAAAGAGTCAACTACCACCACTCGTAGTAGCAATGCAAGATGCTGGCCTGCTAGTGTCGCGATTGCAGCATTCTGCACATCATCGTCCACCCTATAACAACAACTACTGCATAGTAAGCGGAATTTGGAATAAGCTTTTAGATGAAACAAAGGTTTTTGAGGCGTTAGAGATGATCCTGTTCTTCAAGCTTGGGGTGAGACCAAGATCTTGGACCGAGCCTCATTCTGAATGGACAGAAGAGACTGAGATTATAGAACAAACTACAGCGTATTAA

Protein sequence

MSILVQNKFLLSSKTHVSLWSPAIPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTEPHSEWTEETEIIEQTTAY
Homology
[Close]
BLAST of Cp4.1LG01g08160 vs. Swiss-Prot
Match: FAD4_ARATH (Fatty acid desaturase 4, chloroplastic OS=Arabidopsis thaliana GN=FAD4 PE=1 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 6.5e-104
Identity = 179/290 (61.72%), Postives = 218/290 (75.17%), Query Frame = 1 

Query: 25  PRKFVCCIANTTVNVAAA---TTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLN 84
           P +    +   TVN+  +   +  + KP+    +LV+E+   SP             + N
Sbjct: 41  PNREKLLVEQRTVNLPLSNDQSLQSTKPRPNREKLVVEQRLASPP------------LSN 100

Query: 85  DPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYH 144
           DP+L+STW+HR+WV +GCT + +SLAKS+ G   SH  LEPALA   GYILADLGSGVYH
Sbjct: 101 DPTLKSTWTHRLWVAAGCTTLFVSLAKSVIGGFDSHLCLEPALAGYAGYILADLGSGVYH 160

Query: 145 WGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLASND 204
           W IDNYGD STP+ GTQIEAFQGHHK PWTIT+RQFANNL+ALA+ +TFTVLP+ LA ND
Sbjct: 161 WAIDNYGDESTPVVGTQIEAFQGHHKWPWTITRRQFANNLHALAQVITFTVLPLDLAFND 220

Query: 205 PILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNN 264
           P+ HG V   + CI+FSQQFHAWAH  KS+LPPLVVA+QD GLLVSR QH+ HHR PYNN
Sbjct: 221 PVFHGFVCTFAFCILFSQQFHAWAHGTKSKLPPLVVALQDMGLLVSRRQHAEHHRAPYNN 280

Query: 265 NYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTEPHSEWTEETEI 312
           NYCIVSG WN +LDE+KVFEALEM+ +F+LGVRPRSW+EP+S+W EETEI
Sbjct: 281 NYCIVSGAWNNVLDESKVFEALEMVFYFQLGVRPRSWSEPNSDWIEETEI 318

[Close]
BLAST of Cp4.1LG01g08160 vs. Swiss-Prot
Match: FD4L1_ARATH (Fatty acid desaturase 4-like 1, chloroplastic OS=Arabidopsis thaliana GN=FAD4L1 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 6.6e-96
Identity = 168/287 (58.54%), Postives = 205/287 (71.43%), Query Frame = 1 

Query: 24  IPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDP 83
           IPR +      T V V  + T    P+     LV+E+  ++P  P+  N        NDP
Sbjct: 17  IPRSY----GPTRVRVTCSVTTT-NPQLNHENLVVEKRLVNP--PLSKN--------NDP 76

Query: 84  SLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWG 143
           +LQSTW+HR+WV +G T +  S AKSI G   SH WL+PALA   GY+ ADLGSGVYHW 
Sbjct: 77  TLQSTWTHRLWVAAGSTTIFASFAKSIIGGFGSHLWLQPALACYAGYVFADLGSGVYHWA 136

Query: 144 IDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLASNDPI 203
           IDNYG ASTPI G Q+EA QGHHK PWTITKRQFANN Y +ARA+TF VLP+ LA N+P+
Sbjct: 137 IDNYGGASTPIVGAQLEASQGHHKYPWTITKRQFANNSYTIARAITFIVLPLNLAINNPL 196

Query: 204 LHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNY 263
            H  V+  + CI+ SQQFHAWAH  KS+LPPLV+A+QD GLLVSR  H  HH+ PYN+NY
Sbjct: 197 FHSFVSTFAFCILLSQQFHAWAHGTKSKLPPLVMALQDMGLLVSRKDHPGHHQAPYNSNY 256

Query: 264 CIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTEPHSEWTEETE 311
           C+VSG WNK+LDE+ +F+ALEM LFF+ GVRP SW EP+S+WTEETE
Sbjct: 257 CVVSGAWNKVLDESNLFKALEMALFFQFGVRPNSWNEPNSDWTEETE 288

[Close]
BLAST of Cp4.1LG01g08160 vs. Swiss-Prot
Match: FD4L2_ARATH (Fatty acid desaturase 4-like 2, chloroplastic OS=Arabidopsis thaliana GN=FAD4L2 PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.2e-91
Identity = 154/262 (58.78%), Postives = 196/262 (74.81%), Query Frame = 1 

Query: 43  TTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIV 102
           +T  ++P H + +LV+E+  ++P             + NDP+LQSTW+HR+WV +GCT V
Sbjct: 31  STTNSQPNH-EMKLVVEQRLVNPP------------LSNDPTLQSTWTHRLWVAAGCTTV 90

Query: 103 LISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAF 162
            +S +KSI GA  SH WLEP+LA   GYILADLGSGVYHW  DNYGD STP+ G  IE  
Sbjct: 91  FVSFSKSIIGAFGSHLWLEPSLAGFAGYILADLGSGVYHWATDNYGDESTPLVGIHIEDS 150

Query: 163 QGHHKRPWTITKRQFANNLYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFH 222
           Q HHK PWTITKRQFANNL+ +AR  T  VLP+ LA +D ++HG V++ + C++F Q FH
Sbjct: 151 QDHHKCPWTITKRQFANNLHFMARGTTLIVLPLDLAFDDHVVHGFVSMFAFCVLFCQLFH 210

Query: 223 AWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEA 282
           AWAH  KS+LPPLVV +QD GLLVSR+ H  HHR PYNNNYC+VSG+WNK+LDE+ VF+A
Sbjct: 211 AWAHGTKSKLPPLVVGLQDIGLLVSRIHHMNHHRAPYNNNYCVVSGVWNKVLDESNVFKA 270

Query: 283 LEMILFFKLGVRPRSWTEPHSE 305
           +EM+L+ +LGVRPRSWTEP+ E
Sbjct: 271 MEMVLYIQLGVRPRSWTEPNYE 279

[Close]
BLAST of Cp4.1LG01g08160 vs. Swiss-Prot
Match: YL630_MIMIV (Uncharacterized protein L630 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L630 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-11
Identity = 47/181 (25.97%), Postives = 80/181 (44.20%), Query Frame = 1 

Query: 118 TWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFG-TQIEAFQGHHKRPWTITKRQ 177
           T ++  +  ++GY+L+D   G+YHW  D Y    TPI G T I   + HH RP  + +  
Sbjct: 4   TIIDKFIQIVLGYLLSDFIMGIYHWIKDTYFSPFTPIIGKTFIWGSRLHHVRPRYVLEFT 63

Query: 178 FANNLYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLV 237
             + +   A+     + P+        L   +      I  +   H + H+   + P   
Sbjct: 64  DKDLIIDSAKWTLSWIGPLFFWFG---LTPFLVTMFIMISLNDVIHKYTHEIDHERPMWA 123

Query: 238 VAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPR 297
             +Q  G   S  +H  HH  P+  NYC V+   N  L++  ++  LE  + +  GV+PR
Sbjct: 124 TILQRIGFFQSHDEHHLHHIAPHEINYCPVTPYVNIWLEKINLWRKLESFVEYLTGVKPR 181

[Close]
BLAST of Cp4.1LG01g08160 vs. TrEMBL
Match: A0A0A0L6B9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077710 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.1e-150
Identity = 263/318 (82.70%), Postives = 281/318 (88.36%), Query Frame = 1 

Query: 1   MSILVQNKFLLSSKTHVSLWSPAIPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNKFLLSS++HV+  S  IPR+ V CIANTTVN       A  PKH DGQLVIER
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPIPRRVVYCIANTTVN-----GVATSPKHADGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           E +SPT     NSSTYYSVLNDPSL+STWSHR WV  GCT VLISLAKSI GAASSH WL
Sbjct: 61  EVISPTPLTFVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSHIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHK PWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTF VLP++LA +DPILHG V +CSGCIMFSQQFHAWAH KKS+LPPLVVAMQ
Sbjct: 181 LYALARAVTFAVLPVSLAIDDPILHGFVGMCSGCIMFSQQFHAWAHSKKSELPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           +AGLLVSR QHS HHRPPYNNNYCIVSGIWNKLLDETK+FEALEMIL+FKLG+RPRSWTE
Sbjct: 241 NAGLLVSRTQHSTHHRPPYNNNYCIVSGIWNKLLDETKLFEALEMILYFKLGLRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           P+SEWTEETEI+EQTTA+
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]
BLAST of Cp4.1LG01g08160 vs. TrEMBL
Match: W9QQD6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017818 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 1.1e-121
Identity = 223/316 (70.57%), Postives = 249/316 (78.80%), Query Frame = 1 

Query: 1   MSILVQNKFLLSSKTHVSLWSPAIPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNK  L S+ H          K+     +T V+ +A TT   KPK    +LV+E 
Sbjct: 1   MSILAQNKLPLGSQRHF--------HKYHVPSIHTRVHCSATTTT--KPKTEPNRLVVEP 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           + + PT  +  NS+    VLNDPSL STWSHR WV SGCT VLISLAKS+AGAA+SH WL
Sbjct: 61  QVVLPTPSLSTNSAR--PVLNDPSLLSTWSHRAWVASGCTTVLISLAKSLAGAANSHIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EP LA LVGYILADLGSGVYHWGIDNYGDASTP FGTQIEAFQGHHK PWTIT+RQFANN
Sbjct: 121 EPVLAGLVGYILADLGSGVYHWGIDNYGDASTPSFGTQIEAFQGHHKWPWTITRRQFANN 180

Query: 181 LYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           L+ALARAVTFTVLPI L  NDPI+HG VAVCSGCIMFSQQFHAWAH  KS+LPPLVVA+Q
Sbjct: 181 LHALARAVTFTVLPIDLLCNDPIIHGFVAVCSGCIMFSQQFHAWAHGTKSRLPPLVVALQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           D  +LVSR QH+AHHRPPYNNNYCIVSG+WN+ LD+  VFEALEMILFFKLGVRPRSW+E
Sbjct: 241 DLSILVSRSQHAAHHRPPYNNNYCIVSGVWNEFLDKQMVFEALEMILFFKLGVRPRSWSE 300

Query: 301 PHSEWTEETEIIEQTT 317
           P+S+WTEE E   Q T
Sbjct: 301 PNSDWTEEAETPSQLT 304

[Close]
BLAST of Cp4.1LG01g08160 vs. TrEMBL
Match: M5WU70_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009008mg PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 8.3e-114
Identity = 217/321 (67.60%), Postives = 240/321 (74.77%), Query Frame = 1 

Query: 1   MSILVQNKF--LLSSKTHVSLWSPAIPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVI 60
           MSIL Q K    L  + H S  SP         I  T V+ +AATT    P     +LV+
Sbjct: 1   MSILTQAKLHPSLQHQLHTS-HSP---------ILRTAVHCSAATTTKPNPNPNPKKLVL 60

Query: 61  ER--EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASS 120
           E     L P  P+LPN +     LNDPSL STWSHR WV SGCT VL+SLAKSI  AA+S
Sbjct: 61  EPPIRRLEPPPPLLPNPTR--PQLNDPSLLSTWSHRAWVASGCTTVLVSLAKSITCAANS 120

Query: 121 HTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQ 180
           H W EP LA LVGY+LADLGSGVYHWGIDNYG ASTPIFG QIEAFQGHHK PWTIT+R+
Sbjct: 121 HMWAEPILAGLVGYVLADLGSGVYHWGIDNYGGASTPIFGAQIEAFQGHHKWPWTITRRE 180

Query: 181 FANNLYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLV 240
           FANNL+ALAR VTF VLPI L  +DPI++G VAVCSG IMFSQQFHAWAH  KS+LPPLV
Sbjct: 181 FANNLHALARVVTFIVLPIDLVCDDPIVNGFVAVCSGSIMFSQQFHAWAHGTKSRLPPLV 240

Query: 241 VAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPR 300
           VA+QD G+LVSR QHSAHHR PYNNNYCIVSG+WN+ LD+ KVFEALEMILFFK GVRPR
Sbjct: 241 VALQDFGVLVSRSQHSAHHREPYNNNYCIVSGVWNEFLDKHKVFEALEMILFFKQGVRPR 300

Query: 301 SWTEPHSEWTEETEIIEQTTA 318
           SW+EP SEWTEETE   Q TA
Sbjct: 301 SWSEPSSEWTEETETTSQLTA 309

[Close]
BLAST of Cp4.1LG01g08160 vs. TrEMBL
Match: F6HEN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00120 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 8.3e-114
Identity = 201/284 (70.77%), Postives = 224/284 (78.87%), Query Frame = 1 

Query: 39  VAAATTAAAKPKHGDGQLVIEREPLSPT----TPVLPNSSTYYSVLNDPSLQSTWSHRVW 98
           V  + T+ AK KH   QLVIE  PL+PT    TP  P+       + DP L STW HR W
Sbjct: 31  VHCSATSTAKAKHKADQLVIEPRPLTPTPIAKTPDRPS-------IKDPDLLSTWPHRAW 90

Query: 99  VTSGCTIVLISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPI 158
           V SGCT VLISL K   G+A SH WLEP LA L+GY+LADLGSGVYHWGIDNYGDASTP+
Sbjct: 91  VASGCTTVLISLLKCATGSAHSHMWLEPVLAGLIGYVLADLGSGVYHWGIDNYGDASTPV 150

Query: 159 FGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLASNDPILHGLVAVCSGC 218
           FG+QIEAFQGHHK PWTI +RQFANNL+ALARAVTFTVLP+ L  NDP++HG V VCSGC
Sbjct: 151 FGSQIEAFQGHHKWPWTIIRRQFANNLHALARAVTFTVLPLDLVFNDPVVHGFVWVCSGC 210

Query: 219 IMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLL 278
           IMFSQQFHAWAH  KS+LPPLVVA+QDAGLLVSR QH+AHH  PYNNNYCIVSG+WN+ L
Sbjct: 211 IMFSQQFHAWAHGTKSRLPPLVVALQDAGLLVSRSQHAAHHHAPYNNNYCIVSGVWNEFL 270

Query: 279 DETKVFEALEMILFFKLGVRPRSWTEPHSEWTEETEIIEQTTAY 319
           DE KVFEALEMILFF+LGVRPRSW+EP+  W EE E   QTT Y
Sbjct: 271 DENKVFEALEMILFFQLGVRPRSWSEPNFGWIEEIETHSQTTVY 307

[Close]
BLAST of Cp4.1LG01g08160 vs. TrEMBL
Match: U5GX40_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s44870g PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 9.2e-113
Identity = 205/314 (65.29%), Postives = 233/314 (74.20%), Query Frame = 1 

Query: 1   MSILVQNKFLLSSKTHVSLWSPAIPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL Q+   L+     + W     RK + C         +ATT   KPK    QL  E 
Sbjct: 1   MSILPQHNHCLTRSPAHNPWH----RKRIIC---------SATTTPTKPKSSPNQLTFEP 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           + ++P  P L  S +   VLNDPSLQSTWSHR WV +GCT VL+SLAK+IAGA  SH WL
Sbjct: 61  QFVTP--PNLVTSISTPPVLNDPSLQSTWSHRTWVATGCTTVLVSLAKAIAGAGHSHIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EP LA  +GYILADLGSGVYHWGIDNYGD STPIFG QIEAFQGHHK PWTIT+RQFANN
Sbjct: 121 EPMLAGYIGYILADLGSGVYHWGIDNYGDGSTPIFGNQIEAFQGHHKWPWTITRRQFANN 180

Query: 181 LYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           L+ALAR V F VLP+ L  NDP ++  V VCSGCIMFSQQFHAWAH  KS+LPP+VVA+Q
Sbjct: 181 LHALARTVAFFVLPVDLVCNDPTVNAFVGVCSGCIMFSQQFHAWAHGTKSKLPPIVVALQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           D GLLVSR QH AHHR PYNNNYCIVSG+WN+ LD+ KVFEALEM L+FKLGVRPRSW+E
Sbjct: 241 DVGLLVSRSQHGAHHRQPYNNNYCIVSGVWNEFLDKNKVFEALEMALYFKLGVRPRSWSE 299

Query: 301 PHSEWTEETEIIEQ 315
           P ++WTEETE   Q
Sbjct: 301 PTTDWTEETESASQ 299

[Close]
BLAST of Cp4.1LG01g08160 vs. TAIR10
Match: AT4G27030.1 (AT4G27030.1 fatty acid desaturase A)

HSP 1 Score: 378.6 bits (971), Expect = 3.7e-105
Identity = 179/290 (61.72%), Postives = 218/290 (75.17%), Query Frame = 1 

Query: 25  PRKFVCCIANTTVNVAAA---TTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLN 84
           P +    +   TVN+  +   +  + KP+    +LV+E+   SP             + N
Sbjct: 41  PNREKLLVEQRTVNLPLSNDQSLQSTKPRPNREKLVVEQRLASPP------------LSN 100

Query: 85  DPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYH 144
           DP+L+STW+HR+WV +GCT + +SLAKS+ G   SH  LEPALA   GYILADLGSGVYH
Sbjct: 101 DPTLKSTWTHRLWVAAGCTTLFVSLAKSVIGGFDSHLCLEPALAGYAGYILADLGSGVYH 160

Query: 145 WGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLASND 204
           W IDNYGD STP+ GTQIEAFQGHHK PWTIT+RQFANNL+ALA+ +TFTVLP+ LA ND
Sbjct: 161 WAIDNYGDESTPVVGTQIEAFQGHHKWPWTITRRQFANNLHALAQVITFTVLPLDLAFND 220

Query: 205 PILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNN 264
           P+ HG V   + CI+FSQQFHAWAH  KS+LPPLVVA+QD GLLVSR QH+ HHR PYNN
Sbjct: 221 PVFHGFVCTFAFCILFSQQFHAWAHGTKSKLPPLVVALQDMGLLVSRRQHAEHHRAPYNN 280

Query: 265 NYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTEPHSEWTEETEI 312
           NYCIVSG WN +LDE+KVFEALEM+ +F+LGVRPRSW+EP+S+W EETEI
Sbjct: 281 NYCIVSGAWNNVLDESKVFEALEMVFYFQLGVRPRSWSEPNSDWIEETEI 318

[Close]
BLAST of Cp4.1LG01g08160 vs. TAIR10
Match: AT1G62190.1 (AT1G62190.1 Kua-ubiquitin conjugating enzyme hybrid localisation domain)

HSP 1 Score: 352.1 bits (902), Expect = 3.7e-97
Identity = 168/287 (58.54%), Postives = 205/287 (71.43%), Query Frame = 1 

Query: 24  IPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDP 83
           IPR +      T V V  + T    P+     LV+E+  ++P  P+  N        NDP
Sbjct: 17  IPRSY----GPTRVRVTCSVTTT-NPQLNHENLVVEKRLVNP--PLSKN--------NDP 76

Query: 84  SLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWG 143
           +LQSTW+HR+WV +G T +  S AKSI G   SH WL+PALA   GY+ ADLGSGVYHW 
Sbjct: 77  TLQSTWTHRLWVAAGSTTIFASFAKSIIGGFGSHLWLQPALACYAGYVFADLGSGVYHWA 136

Query: 144 IDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLASNDPI 203
           IDNYG ASTPI G Q+EA QGHHK PWTITKRQFANN Y +ARA+TF VLP+ LA N+P+
Sbjct: 137 IDNYGGASTPIVGAQLEASQGHHKYPWTITKRQFANNSYTIARAITFIVLPLNLAINNPL 196

Query: 204 LHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNY 263
            H  V+  + CI+ SQQFHAWAH  KS+LPPLV+A+QD GLLVSR  H  HH+ PYN+NY
Sbjct: 197 FHSFVSTFAFCILLSQQFHAWAHGTKSKLPPLVMALQDMGLLVSRKDHPGHHQAPYNSNY 256

Query: 264 CIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTEPHSEWTEETE 311
           C+VSG WNK+LDE+ +F+ALEM LFF+ GVRP SW EP+S+WTEETE
Sbjct: 257 CVVSGAWNKVLDESNLFKALEMALFFQFGVRPNSWNEPNSDWTEETE 288

[Close]
BLAST of Cp4.1LG01g08160 vs. TAIR10
Match: AT2G22890.1 (AT2G22890.1 Kua-ubiquitin conjugating enzyme hybrid localisation domain)

HSP 1 Score: 337.0 bits (863), Expect = 1.2e-92
Identity = 154/262 (58.78%), Postives = 196/262 (74.81%), Query Frame = 1 

Query: 43  TTAAAKPKHGDGQLVIEREPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIV 102
           +T  ++P H + +LV+E+  ++P             + NDP+LQSTW+HR+WV +GCT V
Sbjct: 31  STTNSQPNH-EMKLVVEQRLVNPP------------LSNDPTLQSTWTHRLWVAAGCTTV 90

Query: 103 LISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAF 162
            +S +KSI GA  SH WLEP+LA   GYILADLGSGVYHW  DNYGD STP+ G  IE  
Sbjct: 91  FVSFSKSIIGAFGSHLWLEPSLAGFAGYILADLGSGVYHWATDNYGDESTPLVGIHIEDS 150

Query: 163 QGHHKRPWTITKRQFANNLYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFH 222
           Q HHK PWTITKRQFANNL+ +AR  T  VLP+ LA +D ++HG V++ + C++F Q FH
Sbjct: 151 QDHHKCPWTITKRQFANNLHFMARGTTLIVLPLDLAFDDHVVHGFVSMFAFCVLFCQLFH 210

Query: 223 AWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEA 282
           AWAH  KS+LPPLVV +QD GLLVSR+ H  HHR PYNNNYC+VSG+WNK+LDE+ VF+A
Sbjct: 211 AWAHGTKSKLPPLVVGLQDIGLLVSRIHHMNHHRAPYNNNYCVVSGVWNKVLDESNVFKA 270

Query: 283 LEMILFFKLGVRPRSWTEPHSE 305
           +EM+L+ +LGVRPRSWTEP+ E
Sbjct: 271 MEMVLYIQLGVRPRSWTEPNYE 279

[Close]
BLAST of Cp4.1LG01g08160 vs. NCBI nr
Match: gi|449470467|ref|XP_004152938.1| (PREDICTED: fatty acid desaturase 4, chloroplastic [Cucumis sativus])

HSP 1 Score: 540.8 bits (1392), Expect = 1.6e-150
Identity = 263/318 (82.70%), Postives = 281/318 (88.36%), Query Frame = 1 

Query: 1   MSILVQNKFLLSSKTHVSLWSPAIPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNKFLLSS++HV+  S  IPR+ V CIANTTVN       A  PKH DGQLVIER
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPIPRRVVYCIANTTVN-----GVATSPKHADGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           E +SPT     NSSTYYSVLNDPSL+STWSHR WV  GCT VLISLAKSI GAASSH WL
Sbjct: 61  EVISPTPLTFVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSHIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHK PWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTF VLP++LA +DPILHG V +CSGCIMFSQQFHAWAH KKS+LPPLVVAMQ
Sbjct: 181 LYALARAVTFAVLPVSLAIDDPILHGFVGMCSGCIMFSQQFHAWAHSKKSELPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           +AGLLVSR QHS HHRPPYNNNYCIVSGIWNKLLDETK+FEALEMIL+FKLG+RPRSWTE
Sbjct: 241 NAGLLVSRTQHSTHHRPPYNNNYCIVSGIWNKLLDETKLFEALEMILYFKLGLRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           P+SEWTEETEI+EQTTA+
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]
BLAST of Cp4.1LG01g08160 vs. NCBI nr
Match: gi|659126922|ref|XP_008463431.1| (PREDICTED: transmembrane protein 189 [Cucumis melo])

HSP 1 Score: 526.9 bits (1356), Expect = 2.4e-146
Identity = 256/318 (80.50%), Postives = 278/318 (87.42%), Query Frame = 1 

Query: 1   MSILVQNKFLLSSKTHVSLWSPAIPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNKFLLSS++HV+  S   PR+ V CIANTTVN    ++     KHGDGQLVIER
Sbjct: 1   MSILAQNKFLLSSRSHVNPCSTPTPRRVVYCIANTTVNGVGTSS-----KHGDGQLVIER 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           E +SP+     NSSTYYSVLNDPSL+STWSHR WV  GCT VLISLAKSI GAASS  WL
Sbjct: 61  EVISPSPLTSVNSSTYYSVLNDPSLRSTWSHRAWVAGGCTTVLISLAKSIVGAASSRIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EPALAALVGYILADLGSG+YHWGIDNYG ASTPIFGTQIEAFQGHHK PWTITKRQFANN
Sbjct: 121 EPALAALVGYILADLGSGIYHWGIDNYGGASTPIFGTQIEAFQGHHKWPWTITKRQFANN 180

Query: 181 LYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           LYALARAVTF VLP++LA +DP LHG V VCSGCIMFSQQFHAWAH KKS++PPLVVAMQ
Sbjct: 181 LYALARAVTFAVLPVSLAFDDPTLHGFVGVCSGCIMFSQQFHAWAHGKKSEIPPLVVAMQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           DAGLLVSR QH+ HHRPPYNNNYCIVSGIWN+LLDETKVFEALEMIL+FKLG+RPRSWTE
Sbjct: 241 DAGLLVSRTQHATHHRPPYNNNYCIVSGIWNQLLDETKVFEALEMILYFKLGLRPRSWTE 300

Query: 301 PHSEWTEETEIIEQTTAY 319
           P+SEWTEETEI+EQTTA+
Sbjct: 301 PNSEWTEETEILEQTTAH 313

[Close]
BLAST of Cp4.1LG01g08160 vs. NCBI nr
Match: gi|703083108|ref|XP_010092130.1| (hypothetical protein L484_017818 [Morus notabilis])

HSP 1 Score: 444.5 bits (1142), Expect = 1.6e-121
Identity = 223/316 (70.57%), Postives = 249/316 (78.80%), Query Frame = 1 

Query: 1   MSILVQNKFLLSSKTHVSLWSPAIPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIER 60
           MSIL QNK  L S+ H          K+     +T V+ +A TT   KPK    +LV+E 
Sbjct: 1   MSILAQNKLPLGSQRHF--------HKYHVPSIHTRVHCSATTTT--KPKTEPNRLVVEP 60

Query: 61  EPLSPTTPVLPNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHTWL 120
           + + PT  +  NS+    VLNDPSL STWSHR WV SGCT VLISLAKS+AGAA+SH WL
Sbjct: 61  QVVLPTPSLSTNSAR--PVLNDPSLLSTWSHRAWVASGCTTVLISLAKSLAGAANSHIWL 120

Query: 121 EPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFANN 180
           EP LA LVGYILADLGSGVYHWGIDNYGDASTP FGTQIEAFQGHHK PWTIT+RQFANN
Sbjct: 121 EPVLAGLVGYILADLGSGVYHWGIDNYGDASTPSFGTQIEAFQGHHKWPWTITRRQFANN 180

Query: 181 LYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVAMQ 240
           L+ALARAVTFTVLPI L  NDPI+HG VAVCSGCIMFSQQFHAWAH  KS+LPPLVVA+Q
Sbjct: 181 LHALARAVTFTVLPIDLLCNDPIIHGFVAVCSGCIMFSQQFHAWAHGTKSRLPPLVVALQ 240

Query: 241 DAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSWTE 300
           D  +LVSR QH+AHHRPPYNNNYCIVSG+WN+ LD+  VFEALEMILFFKLGVRPRSW+E
Sbjct: 241 DLSILVSRSQHAAHHRPPYNNNYCIVSGVWNEFLDKQMVFEALEMILFFKLGVRPRSWSE 300

Query: 301 PHSEWTEETEIIEQTT 317
           P+S+WTEE E   Q T
Sbjct: 301 PNSDWTEEAETPSQLT 304

[Close]
BLAST of Cp4.1LG01g08160 vs. NCBI nr
Match: gi|470119426|ref|XP_004295815.1| (PREDICTED: fatty acid desaturase 4, chloroplastic [Fragaria vesca subsp. vesca])

HSP 1 Score: 427.6 bits (1098), Expect = 2.0e-116
Identity = 216/316 (68.35%), Postives = 240/316 (75.95%), Query Frame = 1 

Query: 1   MSILVQNKFLLSSKTHV-SLWSPAIPRKFVCCIANTTVNVAAATTAAAKPKHGDGQLVIE 60
           MSI  Q K L S K HV +L  P + R  V C   TT           KPK    +LVIE
Sbjct: 1   MSIFTQTKLLPSPKHHVHTLCHPPVLRTTVHCSITTT-----------KPKPVPEKLVIE 60

Query: 61  REPLSPTTPVL-PNSSTYYSVLNDPSLQSTWSHRVWVTSGCTIVLISLAKSIAGAASSHT 120
                P  P L P+      +LNDPSL STWSHR WV SGCT VLISLAKS+ GAA+SH 
Sbjct: 61  ----PPWLPQLEPSPDIARPMLNDPSLLSTWSHRAWVASGCTTVLISLAKSVVGAANSHI 120

Query: 121 WLEPALAALVGYILADLGSGVYHWGIDNYGDASTPIFGTQIEAFQGHHKRPWTITKRQFA 180
           W +P LA LVGY+LADLGSGVYHWGIDNYG ASTPIFG QIEAFQGHHK PWTITKRQFA
Sbjct: 121 WADPILAGLVGYVLADLGSGVYHWGIDNYGGASTPIFGAQIEAFQGHHKWPWTITKRQFA 180

Query: 181 NNLYALARAVTFTVLPITLASNDPILHGLVAVCSGCIMFSQQFHAWAHDKKSQLPPLVVA 240
           NNL+ALAR +TFTVLP+ LA +DPILHG VAVCSGCIMFSQQFHAWAH  KS+LPPLVVA
Sbjct: 181 NNLHALARVITFTVLPLDLAFDDPILHGFVAVCSGCIMFSQQFHAWAHGTKSRLPPLVVA 240

Query: 241 MQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLLDETKVFEALEMILFFKLGVRPRSW 300
           +QD+G+L+SR QHSAHHR PYNNNYCIVSG+WN+ LD+ KVFEALEMILFFK G+RPRSW
Sbjct: 241 LQDSGILISRSQHSAHHRQPYNNNYCIVSGVWNEFLDKQKVFEALEMILFFKQGLRPRSW 300

Query: 301 TEPHSEWTEETEIIEQ 315
           +EP SEW EE E I +
Sbjct: 301 SEPSSEWIEEAETISE 301

[Close]
BLAST of Cp4.1LG01g08160 vs. NCBI nr
Match: gi|225461021|ref|XP_002280983.1| (PREDICTED: fatty acid desaturase 4, chloroplastic [Vitis vinifera])

HSP 1 Score: 418.3 bits (1074), Expect = 1.2e-113
Identity = 201/284 (70.77%), Postives = 224/284 (78.87%), Query Frame = 1 

Query: 39  VAAATTAAAKPKHGDGQLVIEREPLSPT----TPVLPNSSTYYSVLNDPSLQSTWSHRVW 98
           V  + T+ AK KH   QLVIE  PL+PT    TP  P+       + DP L STW HR W
Sbjct: 31  VHCSATSTAKAKHKADQLVIEPRPLTPTPIAKTPDRPS-------IKDPDLLSTWPHRAW 90

Query: 99  VTSGCTIVLISLAKSIAGAASSHTWLEPALAALVGYILADLGSGVYHWGIDNYGDASTPI 158
           V SGCT VLISL K   G+A SH WLEP LA L+GY+LADLGSGVYHWGIDNYGDASTP+
Sbjct: 91  VASGCTTVLISLLKCATGSAHSHMWLEPVLAGLIGYVLADLGSGVYHWGIDNYGDASTPV 150

Query: 159 FGTQIEAFQGHHKRPWTITKRQFANNLYALARAVTFTVLPITLASNDPILHGLVAVCSGC 218
           FG+QIEAFQGHHK PWTI +RQFANNL+ALARAVTFTVLP+ L  NDP++HG V VCSGC
Sbjct: 151 FGSQIEAFQGHHKWPWTIIRRQFANNLHALARAVTFTVLPLDLVFNDPVVHGFVWVCSGC 210

Query: 219 IMFSQQFHAWAHDKKSQLPPLVVAMQDAGLLVSRLQHSAHHRPPYNNNYCIVSGIWNKLL 278
           IMFSQQFHAWAH  KS+LPPLVVA+QDAGLLVSR QH+AHH  PYNNNYCIVSG+WN+ L
Sbjct: 211 IMFSQQFHAWAHGTKSRLPPLVVALQDAGLLVSRSQHAAHHHAPYNNNYCIVSGVWNEFL 270

Query: 279 DETKVFEALEMILFFKLGVRPRSWTEPHSEWTEETEIIEQTTAY 319
           DE KVFEALEMILFF+LGVRPRSW+EP+  W EE E   QTT Y
Sbjct: 271 DENKVFEALEMILFFQLGVRPRSWSEPNFGWIEEIETHSQTTVY 307

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g08160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FAD4_ARATH6.5e-10461.72Fatty acid desaturase 4, chloroplastic OS=Arabidopsis thaliana GN=FAD4 PE=1 SV=1[more]
FD4L1_ARATH6.6e-9658.54Fatty acid desaturase 4-like 1, chloroplastic OS=Arabidopsis thaliana GN=FAD4L1 ... [more]
FD4L2_ARATH2.2e-9158.78Fatty acid desaturase 4-like 2, chloroplastic OS=Arabidopsis thaliana GN=FAD4L2 ... [more]
YL630_MIMIV1.0e-1125.97Uncharacterized protein L630 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L630 PE... [more]
BLAST of Cp4.1LG01g08160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6B9_CUCSA1.1e-15082.70Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077710 PE=4 SV=1[more]
W9QQD6_9ROSA1.1e-12170.57Uncharacterized protein OS=Morus notabilis GN=L484_017818 PE=4 SV=1[more]
M5WU70_PRUPE8.3e-11467.60Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009008mg PE=4 SV=1[more]
F6HEN8_VITVI8.3e-11470.77Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g00120 PE=4 SV=... [more]
U5GX40_POPTR9.2e-11365.29Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s44870g PE=4 SV=1[more]
BLAST of Cp4.1LG01g08160 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27030.13.7e-10561.72 fatty acid desaturase A[more]
AT1G62190.13.7e-9758.54 Kua-ubiquitin conjugating enzyme hybrid localisation domain[more]
AT2G22890.11.2e-9258.78 Kua-ubiquitin conjugating enzyme hybrid localisation domain[more]
BLAST of Cp4.1LG01g08160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449470467|ref|XP_004152938.1|1.6e-15082.70PREDICTED: fatty acid desaturase 4, chloroplastic [Cucumis sativus][more]
gi|659126922|ref|XP_008463431.1|2.4e-14680.50PREDICTED: transmembrane protein 189 [Cucumis melo][more]
gi|703083108|ref|XP_010092130.1|1.6e-12170.57hypothetical protein L484_017818 [Morus notabilis][more]
gi|470119426|ref|XP_004295815.1|2.0e-11668.35PREDICTED: fatty acid desaturase 4, chloroplastic [Fragaria vesca subsp. vesca][more]
gi|225461021|ref|XP_002280983.1|1.2e-11370.77PREDICTED: fatty acid desaturase 4, chloroplastic [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019547TMEM189_B_dmain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030433 ER-associated ubiquitin-dependent protein catabolic process
biological_process GO:0000209 protein polyubiquitination
cellular_component GO:0005575 cellular_component
cellular_component GO:0005783 endoplasmic reticulum
molecular_function GO:0003674 molecular_function
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0031625 ubiquitin protein ligase binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g08160.1Cp4.1LG01g08160.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019547B domain of TMEM189, localisation domainPFAMPF10520TMEM189_B_dmaincoord: 130..298
score: 6.8
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 139..318
score: 1.5
NoneNo IPR availablePANTHERPTHR24067:SF41AKT-INTERACTING PROTEINcoord: 139..318
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g08160Cla005301Watermelon (97103) v1cpewmB386
Cp4.1LG01g08160Csa3G077710Cucumber (Chinese Long) v2cpecuB393
Cp4.1LG01g08160MELO3C025390Melon (DHL92) v3.5.1cpemeB410
Cp4.1LG01g08160ClCG10G005490Watermelon (Charleston Gray)cpewcgB349
Cp4.1LG01g08160CSPI03G05210Wild cucumber (PI 183967)cpecpiB392
Cp4.1LG01g08160Lsi05G006070Bottle gourd (USVL1VR-Ls)cpelsiB368
Cp4.1LG01g08160MELO3C025390.2Melon (DHL92) v3.6.1cpemedB480
Cp4.1LG01g08160CsaV3_3G005230Cucumber (Chinese Long) v3cpecucB0491
Cp4.1LG01g08160Bhi11G000492Wax gourdcpewgoB0480
Cp4.1LG01g08160CsGy3G005290Cucumber (Gy14) v2cgybcpeB369
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g08160Cucurbita pepo (Zucchini)cpecpeB007
Cp4.1LG01g08160Cucumber (Gy14) v1cgycpeB0077
Cp4.1LG01g08160Cucumber (Gy14) v1cgycpeB0078
Cp4.1LG01g08160Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g08160Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g08160Cucurbita moschata (Rifu)cmocpeB312
Cp4.1LG01g08160Cucurbita moschata (Rifu)cmocpeB317
Cp4.1LG01g08160Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g08160Wild cucumber (PI 183967)cpecpiB391
Cp4.1LG01g08160Cucumber (Chinese Long) v2cpecuB392
Cp4.1LG01g08160Bottle gourd (USVL1VR-Ls)cpelsiB370
Cp4.1LG01g08160Watermelon (Charleston Gray)cpewcgB347
Cp4.1LG01g08160Watermelon (97103) v1cpewmB385
Cp4.1LG01g08160Melon (DHL92) v3.5.1cpemeB409
Cp4.1LG01g08160Melon (DHL92) v3.5.1cpemeB413
Cp4.1LG01g08160Cucumber (Gy14) v2cgybcpeB365
Cp4.1LG01g08160Melon (DHL92) v3.6.1cpemedB484
Cp4.1LG01g08160Silver-seed gourdcarcpeB0938
Cp4.1LG01g08160Silver-seed gourdcarcpeB1110
Cp4.1LG01g08160Cucumber (Chinese Long) v3cpecucB0488
Cp4.1LG01g08160Wax gourdcpewgoB0484