Cp4.1LG01g08080 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g08080
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Vacuolar sorting protein SNF8, putative
Location	Cp4.1LG01 : 5087017 .. 5092234 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTTGGAATTAGAAATCTTTGTATTGTATAAGGAAAATATAGTTTTTTTTTTCTTTTTTTTTTTCTCGTCCCCAAAATAAAATTTGACAATTTCTGGTTCTCAACCTCGTTGAAGAACCCGATTGAGTCCAATATCGAGGCTTTGGATCGGAGAAACACAAAGAAATCGAAGTGAAAATGAGGAGAAGACCTGGCATTGGAGGTCTGCAGACGGCTGCGGCAGCGAGGGTTTTTTTCTGCTCAATCTATTTCTGTTCCTCCAAAATTTATGAATTTTTTCAATTTAAGTGCTTAAATATTTGGACTTCTATGGGTTTATTGTTCATCTCCATTTATTTTGACGTTATTTTCATCTTTTTAGATTGTGTTTTCCATTGATTAACCGATGATGATAATATTTATTTCTAGGACCAATACCGTCAGCTGGGTGAAAATGTAGCGAAGCTCAGAACCGATATGATGAAGGAGCAGCTCTCCACCTTTCGATCTCAGTTAGAGGATTTCGCGCGCAAACACAAGGTCTTTATTCCTCCCACAACTCGTCTCCAGTATTTTGCTATCAAATTTATAAGATGAATGAAGCTATCTGCTGGAATTTCTGACTTAAGATTTGAGATCTACTTTATTTAATTAGAAATTTTGTTTCACAATATTAGAGTGATTACGAATTTAAGACTGTTGCTGAATGCTTTCACTTGGATTAATGCTTCCTTTGTTCACGTTGGAGTTGGAAATTATTGTACTACTCTTTCGACTTTGTAATGGCGGCTTATTCTTGCTTCCAAATTATTCCTGAACCAAAAACTAGTGAATGCTGCTCGATTGCTTATTGTGTTGTTTCATGGTTCTCTCCTTTTTGGCCCTGGAAAAGTAGTGTCAGTTTCTCTCCACCTTAATAAAATTGAACTTCAAGTCACTAATTTGATTTGTGCAGAAAGATATCAGCAAGAACCCGGCTTTCAGATCACAGTTTCATGAAATGTGTGCTAAAGTTGGAGTAGATCCCTTGGCCTCAAACAAGGGGTTTTGGGCAGAGCTATTAGGCATTGGTGATTTCTATTACGAGATTGGTAGGTATGCATGTGATCTTATCAGATTGAAGTAAGAAAGTTTTGTAATTTATCATGTCAAAGGAGGGGTTGATGTGTCTCTCGCTTTCTTCATAGGTGTATTCTAGTGATTTATTGTTATCTTATATTGTTTGCTCGATGTTTCTTCTCGAACTTTAGAAGATATTTCTTTTGCTTAAAGGGAAACTTGGCCTGAAGTTGATGGCATGTAAAATTCTTATAGCATTTTGGTTTCCGGTTCATGGTATTGTCTGAGTTGACATGTTATGCTAGTCCTCTGTGTCTAGGTCAAGGAATTTTCATGTGGATTTCTTCTCAAGTTGACAAACCAGGGGAAATGGCTTAGTTGCTTCTTTATATATATATATACATATATATATACATATATATATACATATATATATACATATATATATAGTAGCCTCTTTATTCTTATTCTGACCTAGAACTTGGAAGGAGAACTTCCCGCACTCTAGAAGTGTGAAGTAAAAACAATGGTATTTCAGCCCAGTAATGAATTTTAAATTTCTCATATGAAATTCAGAATGTGTTTTCTTTGCTTATTGGTTAAAGATATTAACAGTTGACAAAGAATAAATTATTATTATGAGTAATTGTTCTAGTATACCTCACTCTTCTTGCTGGATGTGTTTGCTAAATGTAATTAAACTATTTTGCTAGACAGGAGTGCAAATTGTTGACATTTGCTTGTCTACAAGACCCCACAATGGAGGCTTGATTAGCTTACAAGAACTTTGTACCTTGCTTCGGCAGAGAAGAAAAAGTGACCGTGAAGCTGTTTCTGAGGATGACTGCCTGCGAGCTATAAGTAAACTGAAGGTATTGACATTTTCCCGCATGTCTGTGAATATCCATCATTACTGTGTAAAAGAATCTTAATTTTAAGATTTCCATTGAAAGTCATTTACATGTAACTCAATTCTTATTTATATGGTTTATTTCTCTCTTTATATTTAGGGGAAAAAATTTAATTTATACCTCTAAATTTGGAGGGTATATTACTCAAAACCCCAAGCTAATAACAGATAGTAGGTTTTTTGCCTCCATAAAAATTTCATTTTAAAATTGTTGATGGATAGCTTTCACACATGTATAAGATTTCCGTACATGTAGAAATTAACATAAATTAGAGAGAAATGCTAGACACAAATAGATAGTAGGTTTTTTTTTAATGTGAACAATTTTTCATTTTATTATCTTCTTCTATTTTTCTCTACTTATTAAGAAGAACTTTGTGATAATTTTTATTGTTACTTTGGTAAGACTTTTGGGAGATGAATAATTTTATTTAAATGCTTTTAGCTAGTTGTAAATGAAATTGAGTGAAATAGCTATAAATCACGAATGAAGAGTCTAAATATTCATTTATGAGCATGTTGGGTTTAAATTGATACAATTATTAGTTTACAATTTTGATTAATACAACTCTAATGTTTAGGGGCATAAATTGATTTTTGCCTTTATATATCATCGTACCTCCAATTAATTTTCTTAGTTTAAAATTGGTAATAGTAATATTGATATTTAGATTGTATATAATAAGCAAGATACCCATTATTCATTTACATTCATATACACAAGTACTTTAAACGTATTTTTACATTTAGAAAAGATATATATAAATTTCATTCAAAATTCAAATAGTTTCTACAAGTTCCGTGATTTATTCATCAATATATGAATAAACTCAATGCATCAAAATCAATGTGGACATCAGTACTTTCTTTTTTGGCGGGATAAAGTTTTCTTCATTTTTGGGATGACTGAGATGAAAGTAGTTATTCTCACAGGAAAATTTTCTCTTGGGTAGGTTGATTCCAACCTAAATCTTACCTTTATGTTATGTTGCTGGGGGAGATCGTACCAGAATAGTTTATGTGCTTTTTGTGGTACAAATATTTATGTGCTTAACTAATTTTTTCCTTGGGGCACTTTTGTTATTGTTTGTTATTTAATGTAAAATATTTTATTTTGAATGGAGTATATATCTTGTTGATTTACGAAGTGGCATCCTGGAGTTCTTACACTAGCATTCTGATAATTTACTCCAGATATTAGGAAGTGGTTTTGAGGTAATTACTGTTGGCAAGAAAAAACTTGTCCGGTCAGTTCCAACCGAGTTGAACAAAGATCACAATGAAATTCTTGAGCTTGCCCAGGTTACTTTCCCATTCAGACCTTACTGCAATATATTTGTGTTACAAAGAGAATAATCCCAATACCACCGCTGTTCTCTCAGGCTCAAGGCTATGTAACTGTGGAGGAGGTAGAGAGACGACTTTCTTGGACTTCTGGTCGTGCAGTTGATGCCCTCGATACTCTCCTGGATGTAAGTTTTAGCTCACTTTTCTTTTCTTTTAGCTAGCACTATTAGACATTGCATTTGTAAAAGATTTTTGCAATTTTCCAGGAAGGTCTTGCAATGATTGATGATGGCCATCGTGATGGTAGACGTCGTTATTGGTTTCCTTGTGTTTCTCCTATTTCATCTTTACTCGGCACTGATGCCTGACATCATAATTTTGGACAAAACAAGAACTATGGTATGTGGTACGATAGAATGTCACAAAGCAAATGTATCATTTGCATTTTGTGTCAGAAGTACTGTTGTTTTTCATTTCCCCCTATGTTTTATTTATTTGTTTTAGTTGAATTTGGATGGACAATGCATAAAGAACAAGCACTTCTGCAAAGAACAAATCATTATATATAGTTTACATGTGAAGATATTCCAAATAAACAATTTTGTGTCCTTCCATTCTGCAAGGAAAAACATATTATGATCGAAAGAAGAACACAGTTAATACGCTGTAGTTTGTTCTATAATCTCAGTCTCTTCTGTCCATTCAGAATGAGGCTCGGTCCAAGATCTTGGTCTCACCCCAAGCTTGAAGAACAGGATCATCTCTAACGCCTCAAAAACCTTTGTTTCATCTAAAAGCTTATTCCAAATTCCGCTTACTATGCAGTAGTTGTTGTTATAGGGTGGACGATGATGTGCAGAATGCTGCAATCGCGACACTAGCAGGCCAGCATCTTGCATTGCTACTACGAGTGGTGGTAGTTGACTCTTTTTGTCGTGAGCCCATGCATGGAACTGTTGGCTGAACATTATACAGCCTGAGCATACGGCAACCAAACCATGTAGAATAGGGTCATTAGATGCAAGGGTTATAGGAAGTACAGTGAAAGTCACAGCTCGTGCCAAAGCATACAGATTGTTGGCAAACTGACGCTTTGTGATTGTCCATGGCCGCTTATGATGGCCTTGGAATGCTTCTATTTGGGTGCCAAAAATTGGAGTTGAGGCGTCGCCATAGTTATCGATGCCCCAATGGTAAACCCCAGATCCAAGGTCAGCTAAAATGTAGCCTACCAATGCTGCTAAAGCAGGCTCAAGCCAGGTATGTGAACTGGCTGCACCTGCTATTGATTTTGCTAAAGAGATTAGCACTATGGTGCACCCACTTGTCACCCACACACGATGACTCCAGGTCGATTGTAAACTCGGATCATTAAGAACAGAATAATAGGTGGAGGAATTGGGCAATACAGGTGTAGTAGGAGATAAAGGCTCTCGTTCAATGACTAGTTGGCCATCACCGTGCTTGGGTTTGGCGGCGGCGGTGGTAGCAGCAGCAACATTGACTGTGGTATTGGCTATGCAGCAGACAAATTTGCGTGGAATCGCAGGGCTCCACAGGCTAACATGTGTTTTGGAGCTCAATAGGAACTTGTTTTGAACTAAGATCGACATTGCAAAGGAGGAAGAAGAAGAAAGCAATACAGAGGAATGAAGAGTGCCAAAATATTTTGAAGTCTGGTTGAGTTGAATTAGTGGCGAAGAGGAATGCACATAGGATCAATGGTTTTTGTTTGTGGAAAGCTTTTTAGACTACGTGGAACAGTCTATGCCGTTTAAGCATACGCAAGTTACAGGCTTTGAAACCACAAATTTCTGAACCCATTCTTTGGTTGAAGATAGAGACGCAGAGGTTGAGATTAACTCCTTTTGGGCGGTTTGAAACTTCCGTATAAATATTCAATTCTGTGCCAAATTATTTTAGGAAGGAAAAACTAAATAAATAAAAGTGAGTCTTTTAAGTTTGACTCATTTTAGTCTT

mRNA sequence

AAATTTTGGAATTAGAAATCTTTGTATTGTATAAGGAAAATATAGTTTTTTTTTTCTTTTTTTTTTTCTCGTCCCCAAAATAAAATTTGACAATTTCTGGTTCTCAACCTCGTTGAAGAACCCGATTGAGTCCAATATCGAGGCTTTGGATCGGAGAAACACAAAGAAATCGAAGTGAAAATGAGGAGAAGACCTGGCATTGGAGGTCTGCAGACGGCTGCGGCAGCGAGGGACCAATACCGTCAGCTGGGTGAAAATGTAGCGAAGCTCAGAACCGATATGATGAAGGAGCAGCTCTCCACCTTTCGATCTCAGTTAGAGGATTTCGCGCGCAAACACAAGAAAGATATCAGCAAGAACCCGGCTTTCAGATCACAGTTTCATGAAATGTGTGCTAAAGTTGGAGTAGATCCCTTGGCCTCAAACAAGGGGTTTTGGGCAGAGCTATTAGGCATTGGTGATTTCTATTACGAGATTGGAGTGCAAATTGTTGACATTTGCTTGTCTACAAGACCCCACAATGGAGGCTTGATTAGCTTACAAGAACTTTGTACCTTGCTTCGGCAGAGAAGAAAAAGTGACCGTGAAGCTGTTTCTGAGGATGACTGCCTGCGAGCTATAAGTAAACTGAAGATATTAGGAAGTGGTTTTGAGGTAATTACTGTTGGCAAGAAAAAACTTGTCCGGTCAGTTCCAACCGAGTTGAACAAAGATCACAATGAAATTCTTGAGCTTGCCCAGGCTCAAGGCTATGTAACTGTGGAGGAGGTAGAGAGACGACTTTCTTGGACTTCTGGTCGTGCAGTTGATGCCCTCGATACTCTCCTGGATGAAGGTCTTGCAATGATTGATGATGGCCATCGTGATGGTAGACGTCGTTATTGGTTTCCTTGTGTTTCTCCTATTTCATCTTTACTCGGCACTGATGCCTGACATCATAATTTTGGACAAAACAAGAACTATGGTATGTGGTACGATAGAATGTCACAAAGCAAATGTATCATTTGCATTTTGTGTCAGAAGTACTGTTGTTTTTCATTTCCCCCTATGTTTTATTTATTTGTTTTAGTTGAATTTGGATGGACAATGCATAAAGAACAAGCACTTCTGCAAAGAACAAATCATTATATATAGTTTACATGTGAAGATATTCCAAATAAACAATTTTGTGTCCTTCCATTCTGCAAGGAAAAACATATTATGATCGAAAGAAGAACACAGTTAATACGCTGTAGTTTGTTCTATAATCTCAGTCTCTTCTGTCCATTCAGAATGAGGCTCGGTCCAAGATCTTGGTCTCACCCCAAGCTTGAAGAACAGGATCATCTCTAACGCCTCAAAAACCTTTGTTTCATCTAAAAGCTTATTCCAAATTCCGCTTACTATGCAGTAGTTGTTGTTATAGGGTGGACGATGATGTGCAGAATGCTGCAATCGCGACACTAGCAGGCCAGCATCTTGCATTGCTACTACGAGTGGTGGTAGTTGACTCTTTTTGTCGTGAGCCCATGCATGGAACTGTTGGCTGAACATTATACAGCCTGAGCATACGGCAACCAAACCATGTAGAATAGGGTCATTAGATGCAAGGGTTATAGGAAGTACAGTGAAAGTCACAGCTCGTGCCAAAGCATACAGATTGTTGGCAAACTGACGCTTTGTGATTGTCCATGGCCGCTTATGATGGCCTTGGAATGCTTCTATTTGGGTGCCAAAAATTGGAGTTGAGGCGTCGCCATAGTTATCGATGCCCCAATGGTAAACCCCAGATCCAAGGTCAGCTAAAATGTAGCCTACCAATGCTGCTAAAGCAGGCTCAAGCCAGGTATGTGAACTGGCTGCACCTGCTATTGATTTTGCTAAAGAGATTAGCACTATGGTGCACCCACTTGTCACCCACACACGATGACTCCAGGTCGATTGTAAACTCGGATCATTAAGAACAGAATAATAGGTGGAGGAATTGGGCAATACAGGTGTAGTAGGAGATAAAGGCTCTCGTTCAATGACTAGTTGGCCATCACCGTGCTTGGGTTTGGCGGCGGCGGTGGTAGCAGCAGCAACATTGACTGTGGTATTGGCTATGCAGCAGACAAATTTGCGTGGAATCGCAGGGCTCCACAGGCTAACATGTGTTTTGGAGCTCAATAGGAACTTGTTTTGAACTAAGATCGACATTGCAAAGGAGGAAGAAGAAGAAAGCAATACAGAGGAATGAAGAGTGCCAAAATATTTTGAAGTCTGGTTGAGTTGAATTAGTGGCGAAGAGGAATGCACATAGGATCAATGGTTTTTGTTTGTGGAAAGCTTTTTAGACTACGTGGAACAGTCTATGCCGTTTAAGCATACGCAAGTTACAGGCTTTGAAACCACAAATTTCTGAACCCATTCTTTGGTTGAAGATAGAGACGCAGAGGTTGAGATTAACTCCTTTTGGGCGGTTTGAAACTTCCGTATAAATATTCAATTCTGTGCCAAATTATTTTAGGAAGGAAAAACTAAATAAATAAAAGTGAGTCTTTTAAGTTTGACTCATTTTAGTCTT

Coding sequence (CDS)

ATGAGGAGAAGACCTGGCATTGGAGGTCTGCAGACGGCTGCGGCAGCGAGGGACCAATACCGTCAGCTGGGTGAAAATGTAGCGAAGCTCAGAACCGATATGATGAAGGAGCAGCTCTCCACCTTTCGATCTCAGTTAGAGGATTTCGCGCGCAAACACAAGAAAGATATCAGCAAGAACCCGGCTTTCAGATCACAGTTTCATGAAATGTGTGCTAAAGTTGGAGTAGATCCCTTGGCCTCAAACAAGGGGTTTTGGGCAGAGCTATTAGGCATTGGTGATTTCTATTACGAGATTGGAGTGCAAATTGTTGACATTTGCTTGTCTACAAGACCCCACAATGGAGGCTTGATTAGCTTACAAGAACTTTGTACCTTGCTTCGGCAGAGAAGAAAAAGTGACCGTGAAGCTGTTTCTGAGGATGACTGCCTGCGAGCTATAAGTAAACTGAAGATATTAGGAAGTGGTTTTGAGGTAATTACTGTTGGCAAGAAAAAACTTGTCCGGTCAGTTCCAACCGAGTTGAACAAAGATCACAATGAAATTCTTGAGCTTGCCCAGGCTCAAGGCTATGTAACTGTGGAGGAGGTAGAGAGACGACTTTCTTGGACTTCTGGTCGTGCAGTTGATGCCCTCGATACTCTCCTGGATGAAGGTCTTGCAATGATTGATGATGGCCATCGTGATGGTAGACGTCGTTATTGGTTTCCTTGTGTTTCTCCTATTTCATCTTTACTCGGCACTGATGCCTGA

Protein sequence

MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISLQELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHNEILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVSPISSLLGTDA

Homology

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BLAST of Cp4.1LG01g08080 vs. Swiss-Prot
Match: VP221_ARATH (Vacuolar protein sorting-associated protein 22 homolog 1 OS=Arabidopsis thaliana GN=VP22-1 PE=2 SV=2)

HSP 1 Score: 439.5 bits (1129), Expect = 2.5e-122
Identity = 209/249 (83.94%), Postives = 232/249 (93.17%), Query Frame = 1


Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQ AAAARDQYR LGENVAKLRTDMMKEQLSTFRSQLE+FARKHK DI KN
Sbjct: 1   MRRRPGIGGLQKAAAARDQYRLLGENVAKLRTDMMKEQLSTFRSQLEEFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFR+QFHEMCA +GVDPLASNKGFWAELLGIGDFYYE+GVQI+++C+ TR HNGGLISL
Sbjct: 61  PAFRAQFHEMCANIGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCMLTRSHNGGLISL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180
           QELC  LRQRRK DREAV+EDDCLRAISKLK+LGSGFEVIT+GKKKLVRSVPTELNKDHN
Sbjct: 121 QELCNHLRQRRKKDREAVTEDDCLRAISKLKVLGSGFEVITIGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           +ILELAQ QG+V VEEV+RRLSWTSGR +DAL+TLL+EGLAMID+GH+DG+ RYWFPCVS
Sbjct: 181 QILELAQGQGFVIVEEVQRRLSWTSGRVIDALETLLEEGLAMIDNGHKDGKCRYWFPCVS 240

Query: 241 PISSLLGTD 250
            + S +G+D
Sbjct: 241 SVYSSIGSD 249

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BLAST of Cp4.1LG01g08080 vs. Swiss-Prot
Match: SNF8_XENTR (Vacuolar-sorting protein SNF8 OS=Xenopus tropicalis GN=snf8 PE=2 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.7e-62
Identity = 118/238 (49.58%), Postives = 164/238 (68.91%), Query Frame = 1


Query: 2   RRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKNP 61
           RR  G G +     A  +Y++ G  +A+ +   M +QL  F++ LE+FA KHK++I KNP
Sbjct: 3   RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLLQMSKQLEMFKTNLEEFASKHKQEIRKNP 62

Query: 62  AFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISLQ 121
            FR QF +MCA +GVDPLAS KGFW+E+LG+GDFYYE+GVQI+++CL+ + HNGGLI+L 
Sbjct: 63  QFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHHNGGLITLA 122

Query: 122 ELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHNE 181
           EL   + + R    + VS+DD +RAI KLK+LG+GF +I VG   LV+SVP ELN DH  
Sbjct: 123 ELHQHVLKGRGKLAQDVSQDDIIRAIKKLKVLGNGFGIIPVGGSYLVQSVPAELNMDHTV 182

Query: 182 ILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCV 240
           +L+LA+ +G+VTV E++  L+W + RA   L+ LL EGLA I D    G  +YW P +
Sbjct: 183 VLQLAEKKGFVTVNEIKSSLNWETERAKHVLEHLLKEGLAWI-DSQAQGEAQYWLPAL 239

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BLAST of Cp4.1LG01g08080 vs. Swiss-Prot
Match: SNF8_DANRE (Vacuolar-sorting protein SNF8 OS=Danio rerio GN=snf8 PE=2 SV=2)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-61
Identity = 121/248 (48.79%), Postives = 163/248 (65.73%), Query Frame = 1


Query: 2   RRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKNP 61
           RR  G G +     A  +Y++ G  +A+ +   M +QL TF++ LE+FA KHK++I K+ 
Sbjct: 3   RRGVGAGAIAKKKLAEAKYKERGSVLAEDQIAQMSKQLDTFKTHLEEFASKHKQEIRKSS 62

Query: 62  AFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISLQ 121
            FR QF EMCA +GVDPLAS KGFW+E+LG+GDFYYE+GVQI+++CL+ +  NGGLI+L 
Sbjct: 63  QFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLD 122

Query: 122 ELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHNE 181
           EL   + + R    + VS+DD +RAI KLK +G+GF +I VG   LV+SVP ELN DH  
Sbjct: 123 ELHHRVLKGRGKFAQDVSQDDLVRAIKKLKAMGNGFGMIPVGGTYLVQSVPAELNMDHTV 182

Query: 182 ILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVSP 241
           +L+LA+ +GYVTV E+   L W   RA   LD LL EGLA + D    G  +YW P +  
Sbjct: 183 VLQLAEKKGYVTVSEIRESLKWEKERACHVLDHLLKEGLAWL-DSQAAGEPQYWLPAL-- 242

Query: 242 ISSLLGTD 250
            S LL  D
Sbjct: 243 FSELLSQD 247

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BLAST of Cp4.1LG01g08080 vs. Swiss-Prot
Match: SNF8_RAT (Vacuolar-sorting protein SNF8 OS=Rattus norvegicus GN=Snf8 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.4e-61
Identity = 116/238 (48.74%), Postives = 160/238 (67.23%), Query Frame = 1


Query: 2   RRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKNP 61
           RR  G G +     A  +Y++ G  +A+ +   M +QL  F++ LE+FA KHK++I KNP
Sbjct: 3   RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP 62

Query: 62  AFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISLQ 121
            FR QF +MCA +GVDPLAS KGFW+E+LG+GDFYYE+GVQI+++CL+ +  NGGLI+L+
Sbjct: 63  EFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLE 122

Query: 122 ELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHNE 181
           EL   + + R    + VS+DD +RAI KLK LG+GF +I VG   L++SVP ELN DH  
Sbjct: 123 ELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV 182

Query: 182 ILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCV 240
           +L+LA+  GYVTV E++  L W + RA   L+ LL EGLA + D    G   YW P +
Sbjct: 183 VLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWL-DLQAPGEAHYWLPAL 239

[Close]

BLAST of Cp4.1LG01g08080 vs. Swiss-Prot
Match: SNF8_MOUSE (Vacuolar-sorting protein SNF8 OS=Mus musculus GN=Snf8 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.4e-61
Identity = 116/238 (48.74%), Postives = 160/238 (67.23%), Query Frame = 1


Query: 2   RRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKNP 61
           RR  G G +     A  +Y++ G  +A+ +   M +QL  F++ LE+FA KHK++I KNP
Sbjct: 3   RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP 62

Query: 62  AFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISLQ 121
            FR QF +MCA +GVDPLAS KGFW+E+LG+GDFYYE+GVQI+++CL+ +  NGGLI+L+
Sbjct: 63  EFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLE 122

Query: 122 ELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHNE 181
           EL   + + R    + VS+DD +RAI KLK LG+GF +I VG   L++SVP ELN DH  
Sbjct: 123 ELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV 182

Query: 182 ILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCV 240
           +L+LA+  GYVTV E++  L W + RA   L+ LL EGLA + D    G   YW P +
Sbjct: 183 VLQLAEKNGYVTVSEIKTSLKWETERARQVLEHLLKEGLAWL-DLQAPGEAHYWLPAL 239

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BLAST of Cp4.1LG01g08080 vs. TrEMBL
Match: A0A0A0L307_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077720 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 2.7e-136
Identity = 245/250 (98.00%), Postives = 246/250 (98.40%), Query Frame = 1


Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYRQLGENVAKLR DMMKEQLSTFRSQLEDFARKHKKDISKN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRADMMKEQLSTFRSQLEDFARKHKKDISKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180
           QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN
Sbjct: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQGY TV+EVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS
Sbjct: 181 EILELAQAQGYATVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240

Query: 241 PISSLLGTDA 251
           PISS L TDA
Sbjct: 241 PISSSLTTDA 250

[Close]

BLAST of Cp4.1LG01g08080 vs. TrEMBL
Match: A0A067KVS9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00860 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 9.4e-129
Identity = 226/249 (90.76%), Postives = 242/249 (97.19%), Query Frame = 1


Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYR LGENVAKLRTD+MKEQL+TFRSQLE+FARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRLLGENVAKLRTDLMKEQLATFRSQLEEFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           P FR+QFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIV+ICL+TRPHNGGLI+L
Sbjct: 61  PTFRTQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180
           QELCTLLRQ+RKSDREAVSEDDCLRAISKLKILGSGFEVI+VGKKKLVRSVPTELNKDHN
Sbjct: 121 QELCTLLRQKRKSDREAVSEDDCLRAISKLKILGSGFEVISVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQG+VTVEEVERRLSWTSGRA+DALDTLLDEGLAMIDDGH+DG+RRYWFPCV+
Sbjct: 181 EILELAQAQGFVTVEEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHKDGKRRYWFPCVA 240

Query: 241 PISSLLGTD 250
            ISS +G D
Sbjct: 241 SISSAIGAD 249

[Close]

BLAST of Cp4.1LG01g08080 vs. TrEMBL
Match: G7IXK4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g051210 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.2e-128
Identity = 227/250 (90.80%), Postives = 241/250 (96.40%), Query Frame = 1


Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQY++LGENVAK+RTDMMKEQLSTFRSQLEDFARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYKKLGENVAKIRTDMMKEQLSTFRSQLEDFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIVDICL+TRP NGGLI+L
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPLNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180
           QELC LLRQRRKSDR  VSEDDCLRAISKLK+LGSGFEVI+VGKKKLVRSVPTELNKDHN
Sbjct: 121 QELCQLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVISVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQ QG+VTV+EVERRLSWTSGRA+DALDTLLDEGLAMIDDGH+DG+RRYWFPCVS
Sbjct: 181 EILELAQGQGFVTVDEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHKDGKRRYWFPCVS 240

Query: 241 PISSLLGTDA 251
           PISSL G D+
Sbjct: 241 PISSLTGIDS 250

[Close]

BLAST of Cp4.1LG01g08080 vs. TrEMBL
Match: B7FKV8_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 6.1e-128
Identity = 226/250 (90.40%), Postives = 240/250 (96.00%), Query Frame = 1


Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQY++LGENVAK RTDMM+EQLSTFRSQLEDFARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYKKLGENVAKTRTDMMREQLSTFRSQLEDFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIVDICL+TRP NGGLI+L
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPLNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180
           QELC LLRQRRKSDR  VSEDDCLRAISKLK+LGSGFEVI+VGKKKLVRSVPTELNKDHN
Sbjct: 121 QELCQLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVISVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQ QG+VTV+EVERRLSWTSGRA+DALDTLLDEGLAMIDDGH+DG+RRYWFPCVS
Sbjct: 181 EILELAQGQGFVTVDEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHKDGKRRYWFPCVS 240

Query: 241 PISSLLGTDA 251
           PISSL G D+
Sbjct: 241 PISSLTGIDS 250

[Close]

BLAST of Cp4.1LG01g08080 vs. TrEMBL
Match: A0A151T1J8_CAJCA (Vacuolar protein sorting-associated protein 22 isogeny 1 OS=Cajanus cajan GN=KK1_023365 PE=4 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 7.9e-128
Identity = 226/250 (90.40%), Postives = 241/250 (96.40%), Query Frame = 1


Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQT AAARDQ+R LGENVAK+RTD+MKEQL+TFRSQLEDFARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTHAAARDQFRLLGENVAKIRTDLMKEQLATFRSQLEDFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIVDICL+TR HNGGLI+L
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRAHNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180
           QELC LLRQRRKSDR  VSEDDCLRAISKLK+LGSGFEVI+VGKKKLVRSVPTELNKDHN
Sbjct: 121 QELCHLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVISVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQG+VTV+EVERRLSW+SGRAVDALDTLLDEGLAMIDDGHRDG+RRYWFPCVS
Sbjct: 181 EILELAQAQGFVTVDEVERRLSWSSGRAVDALDTLLDEGLAMIDDGHRDGKRRYWFPCVS 240

Query: 241 PISSLLGTDA 251
           PISSL+G D+
Sbjct: 241 PISSLVGVDS 250

[Close]

BLAST of Cp4.1LG01g08080 vs. TAIR10
Match: AT4G27040.1 (AT4G27040.1 EAP30/Vps36 family protein)

HSP 1 Score: 439.5 bits (1129), Expect = 1.4e-123
Identity = 209/249 (83.94%), Postives = 232/249 (93.17%), Query Frame = 1


Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQ AAAARDQYR LGENVAKLRTDMMKEQLSTFRSQLE+FARKHK DI KN
Sbjct: 1   MRRRPGIGGLQKAAAARDQYRLLGENVAKLRTDMMKEQLSTFRSQLEEFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFR+QFHEMCA +GVDPLASNKGFWAELLGIGDFYYE+GVQI+++C+ TR HNGGLISL
Sbjct: 61  PAFRAQFHEMCANIGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCMLTRSHNGGLISL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180
           QELC  LRQRRK DREAV+EDDCLRAISKLK+LGSGFEVIT+GKKKLVRSVPTELNKDHN
Sbjct: 121 QELCNHLRQRRKKDREAVTEDDCLRAISKLKVLGSGFEVITIGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           +ILELAQ QG+V VEEV+RRLSWTSGR +DAL+TLL+EGLAMID+GH+DG+ RYWFPCVS
Sbjct: 181 QILELAQGQGFVIVEEVQRRLSWTSGRVIDALETLLEEGLAMIDNGHKDGKCRYWFPCVS 240

Query: 241 PISSLLGTD 250
            + S +G+D
Sbjct: 241 SVYSSIGSD 249

[Close]

BLAST of Cp4.1LG01g08080 vs. NCBI nr
Match: gi|659126924|ref|XP_008463432.1| (PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Cucumis melo])

HSP 1 Score: 496.1 bits (1276), Expect = 3.5e-137
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 1


Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180
           QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN
Sbjct: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQGYVTV+EVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS
Sbjct: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240

Query: 241 PISSLLGTDA 251
           PISS L TDA
Sbjct: 241 PISSSLTTDA 250

[Close]

BLAST of Cp4.1LG01g08080 vs. NCBI nr
Match: gi|449470437|ref|XP_004152923.1| (PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Cucumis sativus])

HSP 1 Score: 492.7 bits (1267), Expect = 3.9e-136
Identity = 245/250 (98.00%), Postives = 246/250 (98.40%), Query Frame = 1


Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYRQLGENVAKLR DMMKEQLSTFRSQLEDFARKHKKDISKN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRADMMKEQLSTFRSQLEDFARKHKKDISKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180
           QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN
Sbjct: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQGY TV+EVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS
Sbjct: 181 EILELAQAQGYATVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240

Query: 241 PISSLLGTDA 251
           PISS L TDA
Sbjct: 241 PISSSLTTDA 250

[Close]

BLAST of Cp4.1LG01g08080 vs. NCBI nr
Match: gi|1011992601|ref|XP_015955484.1| (PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Arachis duranensis])

HSP 1 Score: 471.9 bits (1213), Expect = 7.1e-130
Identity = 229/250 (91.60%), Postives = 241/250 (96.40%), Query Frame = 1


Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYR LGENVAK+RTD+MKEQL+TFRSQLEDFARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRLLGENVAKIRTDLMKEQLATFRSQLEDFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIVDICL+TRPHNGGLI+L
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPHNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180
           QELC LLRQRRKSDR  VSEDDCLRAISKLK+LGSGFEV +VGKKKLVRSVPTELNKDHN
Sbjct: 121 QELCHLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVFSVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQGYVTVEEVERRLSWTSGRA+DALDTLLDEGLAMIDDGHRDG+RRYWFPCVS
Sbjct: 181 EILELAQAQGYVTVEEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHRDGKRRYWFPCVS 240

Query: 241 PISSLLGTDA 251
           PISS +G D+
Sbjct: 241 PISSSIGVDS 250

[Close]

BLAST of Cp4.1LG01g08080 vs. NCBI nr
Match: gi|802588265|ref|XP_012070790.1| (PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Jatropha curcas])

HSP 1 Score: 467.6 bits (1202), Expect = 1.3e-128
Identity = 226/249 (90.76%), Postives = 242/249 (97.19%), Query Frame = 1


Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYR LGENVAKLRTD+MKEQL+TFRSQLE+FARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRLLGENVAKLRTDLMKEQLATFRSQLEEFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           P FR+QFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIV+ICL+TRPHNGGLI+L
Sbjct: 61  PTFRTQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180
           QELCTLLRQ+RKSDREAVSEDDCLRAISKLKILGSGFEVI+VGKKKLVRSVPTELNKDHN
Sbjct: 121 QELCTLLRQKRKSDREAVSEDDCLRAISKLKILGSGFEVISVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQG+VTVEEVERRLSWTSGRA+DALDTLLDEGLAMIDDGH+DG+RRYWFPCV+
Sbjct: 181 EILELAQAQGFVTVEEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHKDGKRRYWFPCVA 240

Query: 241 PISSLLGTD 250
            ISS +G D
Sbjct: 241 SISSAIGAD 249

[Close]

BLAST of Cp4.1LG01g08080 vs. NCBI nr
Match: gi|357459547|ref|XP_003600054.1| (vacuolar sorting protein SNF8 [Medicago truncatula])

HSP 1 Score: 467.2 bits (1201), Expect = 1.8e-128
Identity = 227/250 (90.80%), Postives = 241/250 (96.40%), Query Frame = 1


Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQY++LGENVAK+RTDMMKEQLSTFRSQLEDFARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYKKLGENVAKIRTDMMKEQLSTFRSQLEDFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIVDICL+TRP NGGLI+L
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPLNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180
           QELC LLRQRRKSDR  VSEDDCLRAISKLK+LGSGFEVI+VGKKKLVRSVPTELNKDHN
Sbjct: 121 QELCQLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVISVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVEEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQ QG+VTV+EVERRLSWTSGRA+DALDTLLDEGLAMIDDGH+DG+RRYWFPCVS
Sbjct: 181 EILELAQGQGFVTVDEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHKDGKRRYWFPCVS 240

Query: 241 PISSLLGTDA 251
           PISSL G D+
Sbjct: 241 PISSLTGIDS 250

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g08080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VP221_ARATH	2.5e-122	83.94	Vacuolar protein sorting-associated protein 22 homolog 1 OS=Arabidopsis thaliana...	[more]
SNF8_XENTR	1.7e-62	49.58	Vacuolar-sorting protein SNF8 OS=Xenopus tropicalis GN=snf8 PE=2 SV=1	[more]
SNF8_DANRE	1.1e-61	48.79	Vacuolar-sorting protein SNF8 OS=Danio rerio GN=snf8 PE=2 SV=2	[more]
SNF8_RAT	5.4e-61	48.74	Vacuolar-sorting protein SNF8 OS=Rattus norvegicus GN=Snf8 PE=1 SV=1	[more]
SNF8_MOUSE	5.4e-61	48.74	Vacuolar-sorting protein SNF8 OS=Mus musculus GN=Snf8 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g08080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L307_CUCSA	2.7e-136	98.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077720 PE=4 SV=1	[more]
A0A067KVS9_JATCU	9.4e-129	90.76	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00860 PE=4 SV=1	[more]
G7IXK4_MEDTR	1.2e-128	90.80	Uncharacterized protein OS=Medicago truncatula GN=MTR_3g051210 PE=4 SV=1	[more]
B7FKV8_MEDTR	6.1e-128	90.40	Uncharacterized protein OS=Medicago truncatula PE=2 SV=1	[more]
A0A151T1J8_CAJCA	7.9e-128	90.40	Vacuolar protein sorting-associated protein 22 isogeny 1 OS=Cajanus cajan GN=KK1...	[more]

BLAST of Cp4.1LG01g08080 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G27040.1	1.4e-123	83.94	EAP30/Vps36 family protein	[more]

BLAST of Cp4.1LG01g08080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126924\|ref\|XP_008463432.1\|	3.5e-137	98.80	PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Cucumis mel...	[more]
gi\|449470437\|ref\|XP_004152923.1\|	3.9e-136	98.00	PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Cucumis sat...	[more]
gi\|1011992601\|ref\|XP_015955484.1\|	7.1e-130	91.60	PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Arachis dur...	[more]
gi\|802588265\|ref\|XP_012070790.1\|	1.3e-128	90.76	PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Jatropha cu...	[more]
gi\|357459547\|ref\|XP_003600054.1\|	1.8e-128	90.80	vacuolar sorting protein SNF8 [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016689	ESCRT-2_cplx_Snf8
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR007286	EAP30

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0043328	protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
biological_process	GO:0071985	multivesicular body sorting pathway
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000814	ESCRT II complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g08080.1	Cp4.1LG01g08080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007286	EAP30	PANTHER	PTHR12806	EAP30 SUBUNIT OF ELL COMPLEX	coord: 1..242 score: 1.4E
IPR007286	EAP30	PFAM	PF04157	EAP30	coord: 6..225 score: 1.7
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	G3DSA:1.10.10.10		coord: 172..240 score: 1.0E-25coord: 91..171 score: 1.1
IPR011991	Winged helix-turn-helix DNA-binding domain	unknown	SSF46785	"Winged helix" DNA-binding domain	coord: 24..174 score: 5.44E-52coord: 175..238 score: 1.52
IPR016689	ESCRT-2 complex, Snf8	PIR	PIRSF017215	ESCRT2_Vps22	coord: 1..244 score: 4.2
None	No IPR available	unknown	Coil	Coil	coord: 13..33 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g08080	Cucsa.059860	Cucumber (Gy14) v1	cgycpeB0077
Cp4.1LG01g08080	CmaCh04G009510	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g08080	CmoCh04G010210	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g08080	Cla005300	Watermelon (97103) v1	cpewmB386
Cp4.1LG01g08080	Csa3G077720	Cucumber (Chinese Long) v2	cpecuB393
Cp4.1LG01g08080	MELO3C025389	Melon (DHL92) v3.5.1	cpemeB410
Cp4.1LG01g08080	ClCG10G005500	Watermelon (Charleston Gray)	cpewcgB349
Cp4.1LG01g08080	CSPI03G05220	Wild cucumber (PI 183967)	cpecpiB392
Cp4.1LG01g08080	Lsi05G006080	Bottle gourd (USVL1VR-Ls)	cpelsiB370
Cp4.1LG01g08080	MELO3C031910.2	Melon (DHL92) v3.6.1	cpemedB480
Cp4.1LG01g08080	CsaV3_3G005220	Cucumber (Chinese Long) v3	cpecucB0488
Cp4.1LG01g08080	Bhi11G000491	Wax gourd	cpewgoB0480
Cp4.1LG01g08080	CsGy3G005280	Cucumber (Gy14) v2	cgybcpeB365
Cp4.1LG01g08080	Carg00064	Silver-seed gourd	carcpeB0938

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g08080	Cucurbita pepo (Zucchini)	cpecpeB007
Cp4.1LG01g08080	Cucumber (Gy14) v1	cgycpeB0078
Cp4.1LG01g08080	Cucurbita maxima (Rimu)	cmacpeB350
Cp4.1LG01g08080	Cucurbita moschata (Rifu)	cmocpeB312
Cp4.1LG01g08080	Cucurbita moschata (Rifu)	cmocpeB317
Cp4.1LG01g08080	Wild cucumber (PI 183967)	cpecpiB391
Cp4.1LG01g08080	Cucumber (Chinese Long) v2	cpecuB392
Cp4.1LG01g08080	Bottle gourd (USVL1VR-Ls)	cpelsiB368
Cp4.1LG01g08080	Watermelon (Charleston Gray)	cpewcgB347
Cp4.1LG01g08080	Watermelon (97103) v1	cpewmB385
Cp4.1LG01g08080	Melon (DHL92) v3.5.1	cpemeB409
Cp4.1LG01g08080	Melon (DHL92) v3.5.1	cpemeB413
Cp4.1LG01g08080	Cucumber (Gy14) v2	cgybcpeB369
Cp4.1LG01g08080	Melon (DHL92) v3.6.1	cpemedB484
Cp4.1LG01g08080	Silver-seed gourd	carcpeB1110
Cp4.1LG01g08080	Cucumber (Chinese Long) v3	cpecucB0491
Cp4.1LG01g08080	Wax gourd	cpewgoB0484