ClCG10G005500 (gene) Watermelon (Charleston Gray)

Overview
NameClCG10G005500
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionVacuolar sorting protein SNF8, putative
LocationCG_Chr10 : 6796312 .. 6800165 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCGATATTTTCCTCGTCCCCAAACTAAAATCGATAAGTTTTGGTTCTCAACTTCGTTGAAGAACCCGATTGAGTTCAATAATATCAAGGCATCCGATCCGAACAACGATCAGAAATCGGAGTGAAAATGAGGAGGAGACCTGGCATTGGAGGCTTACAGACAGCTGCGGCGGCCAGGGTCTATTTCTTTTCATCCAAAATTCATGAATTCTATCAATTTAGTTGCATTGTTATTCGGATTTCTCTTGGGGTTTATTGTTCATCTCCATTAATTTTGAAGTCATTTTCATCCTTTGAGATTGTATTTTCAATTGATTAACCGGTGATGATAATATTTGCAGGACCAATACCGCCAGCTGGGTGAAAATGTAGCGAAGCTCAGAACCGATATGATGAAGGAGCAGCTCTCCACCTTTCGATCTCAGTTAGAGGATTTCGCTCGCAAACACAAGGTTGTTATTCCTACTACAACACCCCTTCAGTGTTTTGTTATCAAATATATAAGATGAATGAAGTTATCTGCTTGATTATCCGAACTGAGATCTACTTTGTTTAATTTGACATTGTCCCTTATAAATATTAAAACTAATTACGAATTTTAGACTGTTGCTCTATGTTTCTACTTGAATAAATGCTTCCTTTGGACTTGGTAATGATGGCTTGTTCTTGCTTCCAAATTATTCCTGACCCAAAAGATAGTGATTGCTTGCTGGATTCCTTATTGTCTGGTTTCGCTGTTTTCTCCTTTTTGGCCTTGCCATAGTAGTATTAATTTATTTTCCACCTTAATAAAATTGAACTTCAAGTCACTCATTTGATTTGTGCAGAAAGATATCAGTAAGAACCCGGCTTTCAGATCACAGTTCCATGAAATGTGTGCTAAAGTTGGAGTAGATCCCTTGGCCTCAAACAAGGGGTTTTGGGCAGAGCTATTAGGCATTGGTGATTTTTATTACGAGATTGGTAGGTATGGATTTTATCTTATCAGATTAAAGTAAAAGAAAATTTTGTGGTTTATCATGTTAAGAGAGAGGTTGAGGTTTCCCTTGCTCTTTTGATAGGCATGTTTTCATAAGTTATATTCATCTTACATACTTTTCAGTTTGCACTTTGTTTCTTCTCGAACTGCAGAAGATATTCCTTTTACTTGAAGGAAAATTTTGCCCGAGTTTGAGGGCATGTAAAATCATTTTGCATGCCTGTACATGGTCATGTCTATGTTGACATGTTGTGCATGTCCTCTTTGCCTTGGCCTAGGAATTTTCATTTGGATTTCTTGTTGAGTTTGGCAAACCGAGGGAAATATCATAGTAGTTTCTTTTTGTATATGGTAGCTTGGAAGGTGAGTTTCCCTTACTCTAGGAATTATGAAGTTAACCAAGTGATATTTCAACTTAGTAATTGATTTTAAGTTTCTCATGTGACATTCTGAAAGCATTTCCTTTGCTTACTGGTTAAAGATGTTGGTAGTTGACAAGAATAAATTATTATTATGGTTGAAGCATAAATCATCATTCTTTTATCTCAATCTTGTTGCTTGATGTGTTTGCTGAATTGAACTATTTTGCTATACAGGAGTGCAAATTGTTGACATTTGCTTGTCTACAAGACCCCACAATGGAGGTTTGATTAGCTTACAAGAACTGTGTACTTTGCTTCGGCAGAGACGAAAAAGTGATCGTGAAGCTGTGTCTGAGGATGACTGCCTGCGAGCTATAAGTAAACTGAAGGTATTGAGATGACCGTCTTTTAGTTGCTATGGGTTTGAAATTAGAAATTTTAAAAGGAGAACATCTTTAGGGTTCTGGTTTCAGTATTAGCTCATTTGAATATTACTCGAACAGCCTTTGAATTTGATTTCCATTTACTGTAATATGTCAACCACCCTGAGTGAGCCCAGAGGTCAAAGGAACAAATTATACAACCCAAATGTGTTTGAAATCGTGAGTTGACAACAGTCTGTAGCTACTCAAGATATTAAATATCTTTGCGAATTTCCTTATGTCAGATGTCATAGGATCATATGGCTATACTATGAAATTAATCCAATCGAGGAGTGTAAGCTATCTGTGACTCCTGCAGTCTATGGGGTAAATTGATGAAAGTATCACTGTTATATTCATCAACTCATTTGTAAGCTCTAGCTATGGATATAATTATAGGCTTCCTACGCTCTTCTAAAAATTATAATCTTTATTATCCAGAACCGCCGTGGGTTGGACTAGTAGTCAATAAAGGTCATGGTATACTATAGATTTAGAAGTAATGGGTTTAATCTATGGTAGTTACGTACCTAAGATTTAATAACCTACGAATTTTCTTGACACCCAGATGTTGTAGGATCAGGTAGGTTGACCTATGAGATTAGCTGAAGTGCACGCAAGTCGGCTTAGACACTCACGGATATAAAAAGTTGAAATAAAAATCTTTATTGTCTAGAAAGAAAAGGAACCTATCTCTTGGCTTGATACCATTATATTCATTAGAGCATTATATTATCCAGCAAAATTTATTGCCATGTCAAAGATTTTCATGAACATTTTGTAGTATACCTGTGAATGAACATAGCTATAACACTGTTTAAACGGATCTTAATTTTAAGATATAACATTATAAGTCATTTAGACATAACTCAATTTTAATTTATATTATCTATTTCTTTCTATATATTTATCATGGTACCTGTCTCTAATATTTTTAATAGTTCTTCAAAATTGGCAATCTTGTTCTTGATATTTACGTGTACCCTTAGTCATTAGGCATGAATGCTATGAATGTACTTTTACATTTGTTTTTCAAATTATATATAAATTGCATTAAACTTCAAATAATTTCTACAAGTTCTGTGATTATCCATATTTTTTCTTGAAGTATTCATCTACATATGAATAAATTCGATGCATTGAAATCAATTTTGACAATTTGACATCAATACTTCCATTTTTGGGGATAAAGCTTTCTCCATAGTTGCGATGACTGTTAGATGAAAACCGGTACTGGCAGGAAAAGTTTTTCCCCTAGGGAAGGTTGATTCCAGCTAAACTCTCATCTTTATGGTATGTTGCTGGGAAGGATCGTAACAGAATGGCTAATATGCTTCTGGTCATACAAATATTTATGTGCTTGACTAATATTTCCCCTGGGGCACTTTTATTATTTTTTGTTATTCTTAATGTAAAATATTTGATTTCGAATGGACTATACTATAAATCTACTTGATTTGCGAAGTGGCATTCTGGAGTATATCTTATACTAACATCCAGATAATTTTCCAGATATTAGGAAGTGGCTTTGAAGTAATTACTGTTGGCAGGAAAAAACTTGTTCGGTCTGTTCCGACCGAATTGAACAAAGATCACAATGAAATTCTTGAGCTTGCGCAGGTTACTTTCTCATTCAGCCCTTTCTGAAATCTATTTGCTTTTAGTTTTTGGCCACAGAGACTAATGGTCATACACAAATTGTTCTCTCAGGCTCAAGGCTATGTGACTGTTGATGAGGTAGAGAGACGACTTTCTTGGACATCTGGTCGTGCAGTTGATGCCCTCGATACTCTCCTGGATGTAAGTTTTAGCTCATATTTATTTTCTCATATATAGCATAGTTAGACACTGGGTTTGTATAAACATTCTGCACTTTTACAGGAAGGTCTTGCGATGATTGATGATGGCCACCGTGATGGTAGACGTCGCTATTGGTTTCCTTGTGTTTCTCCTATCTCATCTTCTTTCACTACTGATGCCTAACATGATAATTTTTTAAAGAACAAATCCTATGTAGTTTATGGTACAATAGAATCAAAAAGAAAGCAAATGTATCCTATGCTTTTTGTATCAATGCTATTGGTTTTCAT

mRNA sequence

CTCCGATATTTTCCTCGTCCCCAAACTAAAATCGATAAGTTTTGGTTCTCAACTTCGTTGAAGAACCCGATTGAGTTCAATAATATCAAGGCATCCGATCCGAACAACGATCAGAAATCGGAGTGAAAATGAGGAGGAGACCTGGCATTGGAGGCTTACAGACAGCTGCGGCGGCCAGGGACCAATACCGCCAGCTGGGTGAAAATGTAGCGAAGCTCAGAACCGATATGATGAAGGAGCAGCTCTCCACCTTTCGATCTCAGTTAGAGGATTTCGCTCGCAAACACAAGAAAGATATCAGTAAGAACCCGGCTTTCAGATCACAGTTCCATGAAATGTGTGCTAAAGTTGGAGTAGATCCCTTGGCCTCAAACAAGGGGTTTTGGGCAGAGCTATTAGGCATTGGTGATTTTTATTACGAGATTGGAGTGCAAATTGTTGACATTTGCTTGTCTACAAGACCCCACAATGGAGGTTTGATTAGCTTACAAGAACTGTGTACTTTGCTTCGGCAGAGACGAAAAAGTGATCGTGAAGCTGTGTCTGAGGATGACTGCCTGCGAGCTATAAGTAAACTGAAGATATTAGGAAGTGGCTTTGAAGTAATTACTGTTGGCAGGAAAAAACTTGTTCGGTCTGTTCCGACCGAATTGAACAAAGATCACAATGAAATTCTTGAGCTTGCGCAGGCTCAAGGCTATGTGACTGTTGATGAGGTAGAGAGACGACTTTCTTGGACATCTGGTCGTGCAGTTGATGCCCTCGATACTCTCCTGGATGAAGGTCTTGCGATGATTGATGATGGCCACCGTGATGGTAGACGTCGCTATTGGTTTCCTTGTGTTTCTCCTATCTCATCTTCTTTCACTACTGATGCCTAACATGATAATTTTTTAAAGAACAAATCCTATGTAGTTTATGGTACAATAGAATCAAAAAGAAAGCAAATGTATCCTATGCTTTTTGTATCAATGCTATTGGTTTTCAT

Coding sequence (CDS)

ATGAGGAGGAGACCTGGCATTGGAGGCTTACAGACAGCTGCGGCGGCCAGGGACCAATACCGCCAGCTGGGTGAAAATGTAGCGAAGCTCAGAACCGATATGATGAAGGAGCAGCTCTCCACCTTTCGATCTCAGTTAGAGGATTTCGCTCGCAAACACAAGAAAGATATCAGTAAGAACCCGGCTTTCAGATCACAGTTCCATGAAATGTGTGCTAAAGTTGGAGTAGATCCCTTGGCCTCAAACAAGGGGTTTTGGGCAGAGCTATTAGGCATTGGTGATTTTTATTACGAGATTGGAGTGCAAATTGTTGACATTTGCTTGTCTACAAGACCCCACAATGGAGGTTTGATTAGCTTACAAGAACTGTGTACTTTGCTTCGGCAGAGACGAAAAAGTGATCGTGAAGCTGTGTCTGAGGATGACTGCCTGCGAGCTATAAGTAAACTGAAGATATTAGGAAGTGGCTTTGAAGTAATTACTGTTGGCAGGAAAAAACTTGTTCGGTCTGTTCCGACCGAATTGAACAAAGATCACAATGAAATTCTTGAGCTTGCGCAGGCTCAAGGCTATGTGACTGTTGATGAGGTAGAGAGACGACTTTCTTGGACATCTGGTCGTGCAGTTGATGCCCTCGATACTCTCCTGGATGAAGGTCTTGCGATGATTGATGATGGCCACCGTGATGGTAGACGTCGCTATTGGTTTCCTTGTGTTTCTCCTATCTCATCTTCTTTCACTACTGATGCCTAA

Protein sequence

MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKNPAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISLQELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHNEILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVSPISSSFTTDA
Homology
[Close]
BLAST of ClCG10G005500 vs. Swiss-Prot
Match: VP221_ARATH (Vacuolar protein sorting-associated protein 22 homolog 1 OS=Arabidopsis thaliana GN=VP22-1 PE=2 SV=2)

HSP 1 Score: 433.7 bits (1114), Expect = 1.3e-120
Identity = 207/249 (83.13%), Postives = 229/249 (91.97%), Query Frame = 1 

Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQ AAAARDQYR LGENVAKLRTDMMKEQLSTFRSQLE+FARKHK DI KN
Sbjct: 1   MRRRPGIGGLQKAAAARDQYRLLGENVAKLRTDMMKEQLSTFRSQLEEFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFR+QFHEMCA +GVDPLASNKGFWAELLGIGDFYYE+GVQI+++C+ TR HNGGLISL
Sbjct: 61  PAFRAQFHEMCANIGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCMLTRSHNGGLISL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHN 180
           QELC  LRQRRK DREAV+EDDCLRAISKLK+LGSGFEVIT+G+KKLVRSVPTELNKDHN
Sbjct: 121 QELCNHLRQRRKKDREAVTEDDCLRAISKLKVLGSGFEVITIGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           +ILELAQ QG+V V+EV+RRLSWTSGR +DAL+TLL+EGLAMID+GH+DG+ RYWFPCVS
Sbjct: 181 QILELAQGQGFVIVEEVQRRLSWTSGRVIDALETLLEEGLAMIDNGHKDGKCRYWFPCVS 240

Query: 241 PISSSFTTD 250
            + SS  +D
Sbjct: 241 SVYSSIGSD 249

[Close]
BLAST of ClCG10G005500 vs. Swiss-Prot
Match: SNF8_XENTR (Vacuolar-sorting protein SNF8 OS=Xenopus tropicalis GN=snf8 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-62
Identity = 118/238 (49.58%), Postives = 163/238 (68.49%), Query Frame = 1 

Query: 2   RRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKNP 61
           RR  G G +     A  +Y++ G  +A+ +   M +QL  F++ LE+FA KHK++I KNP
Sbjct: 3   RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLLQMSKQLEMFKTNLEEFASKHKQEIRKNP 62

Query: 62  AFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISLQ 121
            FR QF +MCA +GVDPLAS KGFW+E+LG+GDFYYE+GVQI+++CL+ + HNGGLI+L 
Sbjct: 63  QFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHHNGGLITLA 122

Query: 122 ELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHNE 181
           EL   + + R    + VS+DD +RAI KLK+LG+GF +I VG   LV+SVP ELN DH  
Sbjct: 123 ELHQHVLKGRGKLAQDVSQDDIIRAIKKLKVLGNGFGIIPVGGSYLVQSVPAELNMDHTV 182

Query: 182 ILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCV 240
           +L+LA+ +G+VTV+E++  L+W + RA   L+ LL EGLA I D    G  +YW P +
Sbjct: 183 VLQLAEKKGFVTVNEIKSSLNWETERAKHVLEHLLKEGLAWI-DSQAQGEAQYWLPAL 239

[Close]
BLAST of ClCG10G005500 vs. Swiss-Prot
Match: SNF8_RAT (Vacuolar-sorting protein SNF8 OS=Rattus norvegicus GN=Snf8 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.4e-61
Identity = 116/238 (48.74%), Postives = 158/238 (66.39%), Query Frame = 1 

Query: 2   RRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKNP 61
           RR  G G +     A  +Y++ G  +A+ +   M +QL  F++ LE+FA KHK++I KNP
Sbjct: 3   RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP 62

Query: 62  AFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISLQ 121
            FR QF +MCA +GVDPLAS KGFW+E+LG+GDFYYE+GVQI+++CL+ +  NGGLI+L+
Sbjct: 63  EFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLE 122

Query: 122 ELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHNE 181
           EL   + + R    + VS+DD +RAI KLK LG+GF +I VG   L++SVP ELN DH  
Sbjct: 123 ELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV 182

Query: 182 ILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCV 240
           +L+LA+  GYVTV E++  L W + RA   L+ LL EGLA + D    G   YW P +
Sbjct: 183 VLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWL-DLQAPGEAHYWLPAL 239

[Close]
BLAST of ClCG10G005500 vs. Swiss-Prot
Match: SNF8_MOUSE (Vacuolar-sorting protein SNF8 OS=Mus musculus GN=Snf8 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.4e-61
Identity = 116/238 (48.74%), Postives = 158/238 (66.39%), Query Frame = 1 

Query: 2   RRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKNP 61
           RR  G G +     A  +Y++ G  +A+ +   M +QL  F++ LE+FA KHK++I KNP
Sbjct: 3   RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP 62

Query: 62  AFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISLQ 121
            FR QF +MCA +GVDPLAS KGFW+E+LG+GDFYYE+GVQI+++CL+ +  NGGLI+L+
Sbjct: 63  EFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLE 122

Query: 122 ELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHNE 181
           EL   + + R    + VS+DD +RAI KLK LG+GF +I VG   L++SVP ELN DH  
Sbjct: 123 ELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV 182

Query: 182 ILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCV 240
           +L+LA+  GYVTV E++  L W + RA   L+ LL EGLA + D    G   YW P +
Sbjct: 183 VLQLAEKNGYVTVSEIKTSLKWETERARQVLEHLLKEGLAWL-DLQAPGEAHYWLPAL 239

[Close]
BLAST of ClCG10G005500 vs. Swiss-Prot
Match: SNF8_HUMAN (Vacuolar-sorting protein SNF8 OS=Homo sapiens GN=SNF8 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.4e-61
Identity = 116/238 (48.74%), Postives = 158/238 (66.39%), Query Frame = 1 

Query: 2   RRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKNP 61
           RR  G G +     A  +Y++ G  +A+ +   M +QL  F++ LE+FA KHK++I KNP
Sbjct: 3   RRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRKNP 62

Query: 62  AFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISLQ 121
            FR QF +MCA +GVDPLAS KGFW+E+LG+GDFYYE+GVQI+++CL+ +  NGGLI+L+
Sbjct: 63  EFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLE 122

Query: 122 ELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHNE 181
           EL   + + R    + VS+DD +RAI KLK LG+GF +I VG   L++SVP ELN DH  
Sbjct: 123 ELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDHTV 182

Query: 182 ILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCV 240
           +L+LA+  GYVTV E++  L W + RA   L+ LL EGLA + D    G   YW P +
Sbjct: 183 VLQLAEKNGYVTVSEIKASLKWETERARQVLEHLLKEGLAWL-DLQAPGEAHYWLPAL 239

[Close]
BLAST of ClCG10G005500 vs. TrEMBL
Match: A0A0A0L307_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077720 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 7.2e-137
Identity = 246/250 (98.40%), Postives = 247/250 (98.80%), Query Frame = 1 

Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYRQLGENVAKLR DMMKEQLSTFRSQLEDFARKHKKDISKN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRADMMKEQLSTFRSQLEDFARKHKKDISKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHN 180
           QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVG+KKLVRSVPTELNKDHN
Sbjct: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQGY TVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS
Sbjct: 181 EILELAQAQGYATVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240

Query: 241 PISSSFTTDA 251
           PISSS TTDA
Sbjct: 241 PISSSLTTDA 250

[Close]
BLAST of ClCG10G005500 vs. TrEMBL
Match: U5GUN0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s44880g PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 8.8e-127
Identity = 224/249 (89.96%), Postives = 240/249 (96.39%), Query Frame = 1 

Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYR LGENVAKLRTD+MKEQL+TFRSQLEDFARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRLLGENVAKLRTDLMKEQLATFRSQLEDFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           P FR+QFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIV+ICL+TRPHNGGLI+L
Sbjct: 61  PTFRTQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHN 180
           QELC LLRQ+RKSDREAVSEDDCLRAISKLKILGSGFEVI+VG++KLVRSVPTELNKDHN
Sbjct: 121 QELCALLRQKRKSDREAVSEDDCLRAISKLKILGSGFEVISVGKRKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQG+VTVDE+ERRLSWTSGRA DALDTLLDEGLAMIDDGHRDG+RRYWFPCVS
Sbjct: 181 EILELAQAQGFVTVDELERRLSWTSGRATDALDTLLDEGLAMIDDGHRDGKRRYWFPCVS 240

Query: 241 PISSSFTTD 250
            IS+S  +D
Sbjct: 241 SISTSVVSD 249

[Close]
BLAST of ClCG10G005500 vs. TrEMBL
Match: A0A067KVS9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00860 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.5e-126
Identity = 223/249 (89.56%), Postives = 241/249 (96.79%), Query Frame = 1 

Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYR LGENVAKLRTD+MKEQL+TFRSQLE+FARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRLLGENVAKLRTDLMKEQLATFRSQLEEFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           P FR+QFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIV+ICL+TRPHNGGLI+L
Sbjct: 61  PTFRTQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHN 180
           QELCTLLRQ+RKSDREAVSEDDCLRAISKLKILGSGFEVI+VG+KKLVRSVPTELNKDHN
Sbjct: 121 QELCTLLRQKRKSDREAVSEDDCLRAISKLKILGSGFEVISVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQG+VTV+EVERRLSWTSGRA+DALDTLLDEGLAMIDDGH+DG+RRYWFPCV+
Sbjct: 181 EILELAQAQGFVTVEEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHKDGKRRYWFPCVA 240

Query: 241 PISSSFTTD 250
            ISS+   D
Sbjct: 241 SISSAIGAD 249

[Close]
BLAST of ClCG10G005500 vs. TrEMBL
Match: G7IXK4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_3g051210 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.0e-126
Identity = 224/244 (91.80%), Postives = 237/244 (97.13%), Query Frame = 1 

Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQY++LGENVAK+RTDMMKEQLSTFRSQLEDFARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYKKLGENVAKIRTDMMKEQLSTFRSQLEDFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIVDICL+TRP NGGLI+L
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPLNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHN 180
           QELC LLRQRRKSDR  VSEDDCLRAISKLK+LGSGFEVI+VG+KKLVRSVPTELNKDHN
Sbjct: 121 QELCQLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVISVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQ QG+VTVDEVERRLSWTSGRA+DALDTLLDEGLAMIDDGH+DG+RRYWFPCVS
Sbjct: 181 EILELAQGQGFVTVDEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHKDGKRRYWFPCVS 240

Query: 241 PISS 245
           PISS
Sbjct: 241 PISS 244

[Close]
BLAST of ClCG10G005500 vs. TrEMBL
Match: B9SAF4_RICCO (Vacuolar sorting protein SNF8, putative OS=Ricinus communis GN=RCOM_0585710 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 2.6e-126
Identity = 225/249 (90.36%), Postives = 239/249 (95.98%), Query Frame = 1 

Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYR LGENVAKLRTD+MKEQLSTFRSQLE+FARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRLLGENVAKLRTDLMKEQLSTFRSQLEEFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           P FR+QFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIV+ICL+TRPHNGGLI+L
Sbjct: 61  PTFRAQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHN 180
           QELCTLLRQ+RKSDR AVSEDDCLRAISKLKILG+GFEVI+VG+KKLVRSVPTELNKDHN
Sbjct: 121 QELCTLLRQKRKSDRGAVSEDDCLRAISKLKILGNGFEVISVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQG+VTVDEVERRLSWTSGRA+DALDTLLDEGLAMIDDGH DG+RRYWFPCVS
Sbjct: 181 EILELAQAQGFVTVDEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHGDGKRRYWFPCVS 240

Query: 241 PISSSFTTD 250
            ISSS   D
Sbjct: 241 SISSSVGAD 249

[Close]
BLAST of ClCG10G005500 vs. TAIR10
Match: AT4G27040.1 (AT4G27040.1 EAP30/Vps36 family protein)

HSP 1 Score: 433.7 bits (1114), Expect = 7.6e-122
Identity = 207/249 (83.13%), Postives = 229/249 (91.97%), Query Frame = 1 

Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQ AAAARDQYR LGENVAKLRTDMMKEQLSTFRSQLE+FARKHK DI KN
Sbjct: 1   MRRRPGIGGLQKAAAARDQYRLLGENVAKLRTDMMKEQLSTFRSQLEEFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFR+QFHEMCA +GVDPLASNKGFWAELLGIGDFYYE+GVQI+++C+ TR HNGGLISL
Sbjct: 61  PAFRAQFHEMCANIGVDPLASNKGFWAELLGIGDFYYELGVQIIEVCMLTRSHNGGLISL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHN 180
           QELC  LRQRRK DREAV+EDDCLRAISKLK+LGSGFEVIT+G+KKLVRSVPTELNKDHN
Sbjct: 121 QELCNHLRQRRKKDREAVTEDDCLRAISKLKVLGSGFEVITIGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           +ILELAQ QG+V V+EV+RRLSWTSGR +DAL+TLL+EGLAMID+GH+DG+ RYWFPCVS
Sbjct: 181 QILELAQGQGFVIVEEVQRRLSWTSGRVIDALETLLEEGLAMIDNGHKDGKCRYWFPCVS 240

Query: 241 PISSSFTTD 250
            + SS  +D
Sbjct: 241 SVYSSIGSD 249

[Close]
BLAST of ClCG10G005500 vs. NCBI nr
Match: gi|659126924|ref|XP_008463432.1| (PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Cucumis melo])

HSP 1 Score: 498.0 bits (1281), Expect = 9.3e-138
Identity = 248/250 (99.20%), Postives = 249/250 (99.60%), Query Frame = 1 

Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHN 180
           QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVG+KKLVRSVPTELNKDHN
Sbjct: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS
Sbjct: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240

Query: 241 PISSSFTTDA 251
           PISSS TTDA
Sbjct: 241 PISSSLTTDA 250

[Close]
BLAST of ClCG10G005500 vs. NCBI nr
Match: gi|449470437|ref|XP_004152923.1| (PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Cucumis sativus])

HSP 1 Score: 494.6 bits (1272), Expect = 1.0e-136
Identity = 246/250 (98.40%), Postives = 247/250 (98.80%), Query Frame = 1 

Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYRQLGENVAKLR DMMKEQLSTFRSQLEDFARKHKKDISKN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRADMMKEQLSTFRSQLEDFARKHKKDISKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHN 180
           QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVG+KKLVRSVPTELNKDHN
Sbjct: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQGY TVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS
Sbjct: 181 EILELAQAQGYATVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240

Query: 241 PISSSFTTDA 251
           PISSS TTDA
Sbjct: 241 PISSSLTTDA 250

[Close]
BLAST of ClCG10G005500 vs. NCBI nr
Match: gi|1011992601|ref|XP_015955484.1| (PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Arachis duranensis])

HSP 1 Score: 466.1 bits (1198), Expect = 3.9e-128
Identity = 227/250 (90.80%), Postives = 240/250 (96.00%), Query Frame = 1 

Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYR LGENVAK+RTD+MKEQL+TFRSQLEDFARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRLLGENVAKIRTDLMKEQLATFRSQLEDFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIVDICL+TRPHNGGLI+L
Sbjct: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRPHNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHN 180
           QELC LLRQRRKSDR  VSEDDCLRAISKLK+LGSGFEV +VG+KKLVRSVPTELNKDHN
Sbjct: 121 QELCHLLRQRRKSDRGVVSEDDCLRAISKLKVLGSGFEVFSVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQGYVTV+EVERRLSWTSGRA+DALDTLLDEGLAMIDDGHRDG+RRYWFPCVS
Sbjct: 181 EILELAQAQGYVTVEEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHRDGKRRYWFPCVS 240

Query: 241 PISSSFTTDA 251
           PISSS   D+
Sbjct: 241 PISSSIGVDS 250

[Close]
BLAST of ClCG10G005500 vs. NCBI nr
Match: gi|566154928|ref|XP_006370686.1| (hypothetical protein POPTR_0001s44880g [Populus trichocarpa])

HSP 1 Score: 461.1 bits (1185), Expect = 1.3e-126
Identity = 224/249 (89.96%), Postives = 240/249 (96.39%), Query Frame = 1 

Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYR LGENVAKLRTD+MKEQL+TFRSQLEDFARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRLLGENVAKLRTDLMKEQLATFRSQLEDFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           P FR+QFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIV+ICL+TRPHNGGLI+L
Sbjct: 61  PTFRTQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHN 180
           QELC LLRQ+RKSDREAVSEDDCLRAISKLKILGSGFEVI+VG++KLVRSVPTELNKDHN
Sbjct: 121 QELCALLRQKRKSDREAVSEDDCLRAISKLKILGSGFEVISVGKRKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQG+VTVDE+ERRLSWTSGRA DALDTLLDEGLAMIDDGHRDG+RRYWFPCVS
Sbjct: 181 EILELAQAQGFVTVDELERRLSWTSGRATDALDTLLDEGLAMIDDGHRDGKRRYWFPCVS 240

Query: 241 PISSSFTTD 250
            IS+S  +D
Sbjct: 241 SISTSVVSD 249

[Close]
BLAST of ClCG10G005500 vs. NCBI nr
Match: gi|802588265|ref|XP_012070790.1| (PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Jatropha curcas])

HSP 1 Score: 460.3 bits (1183), Expect = 2.1e-126
Identity = 223/249 (89.56%), Postives = 241/249 (96.79%), Query Frame = 1 

Query: 1   MRRRPGIGGLQTAAAARDQYRQLGENVAKLRTDMMKEQLSTFRSQLEDFARKHKKDISKN 60
           MRRRPGIGGLQTAAAARDQYR LGENVAKLRTD+MKEQL+TFRSQLE+FARKHK DI KN
Sbjct: 1   MRRRPGIGGLQTAAAARDQYRLLGENVAKLRTDLMKEQLATFRSQLEEFARKHKNDIRKN 60

Query: 61  PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYEIGVQIVDICLSTRPHNGGLISL 120
           P FR+QFHEMCAKVGVDPLASNKGFWAELLGIGDFYYE+GVQIV+ICL+TRPHNGGLI+L
Sbjct: 61  PTFRTQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVEICLATRPHNGGLINL 120

Query: 121 QELCTLLRQRRKSDREAVSEDDCLRAISKLKILGSGFEVITVGRKKLVRSVPTELNKDHN 180
           QELCTLLRQ+RKSDREAVSEDDCLRAISKLKILGSGFEVI+VG+KKLVRSVPTELNKDHN
Sbjct: 121 QELCTLLRQKRKSDREAVSEDDCLRAISKLKILGSGFEVISVGKKKLVRSVPTELNKDHN 180

Query: 181 EILELAQAQGYVTVDEVERRLSWTSGRAVDALDTLLDEGLAMIDDGHRDGRRRYWFPCVS 240
           EILELAQAQG+VTV+EVERRLSWTSGRA+DALDTLLDEGLAMIDDGH+DG+RRYWFPCV+
Sbjct: 181 EILELAQAQGFVTVEEVERRLSWTSGRAIDALDTLLDEGLAMIDDGHKDGKRRYWFPCVA 240

Query: 241 PISSSFTTD 250
            ISS+   D
Sbjct: 241 SISSAIGAD 249

The following BLAST results are available for this feature:
BLAST of ClCG10G005500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
VP221_ARATH1.3e-12083.13Vacuolar protein sorting-associated protein 22 homolog 1 OS=Arabidopsis thaliana... [more]
SNF8_XENTR1.3e-6249.58Vacuolar-sorting protein SNF8 OS=Xenopus tropicalis GN=snf8 PE=2 SV=1[more]
SNF8_RAT5.4e-6148.74Vacuolar-sorting protein SNF8 OS=Rattus norvegicus GN=Snf8 PE=1 SV=1[more]
SNF8_MOUSE5.4e-6148.74Vacuolar-sorting protein SNF8 OS=Mus musculus GN=Snf8 PE=1 SV=1[more]
SNF8_HUMAN5.4e-6148.74Vacuolar-sorting protein SNF8 OS=Homo sapiens GN=SNF8 PE=1 SV=1[more]
BLAST of ClCG10G005500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L307_CUCSA7.2e-13798.40Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077720 PE=4 SV=1[more]
U5GUN0_POPTR8.8e-12789.96Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s44880g PE=4 SV=1[more]
A0A067KVS9_JATCU1.5e-12689.56Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00860 PE=4 SV=1[more]
G7IXK4_MEDTR2.0e-12691.80Uncharacterized protein OS=Medicago truncatula GN=MTR_3g051210 PE=4 SV=1[more]
B9SAF4_RICCO2.6e-12690.36Vacuolar sorting protein SNF8, putative OS=Ricinus communis GN=RCOM_0585710 PE=4... [more]
BLAST of ClCG10G005500 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27040.17.6e-12283.13 EAP30/Vps36 family protein[more]
BLAST of ClCG10G005500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659126924|ref|XP_008463432.1|9.3e-13899.20PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Cucumis mel... [more]
gi|449470437|ref|XP_004152923.1|1.0e-13698.40PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Cucumis sat... [more]
gi|1011992601|ref|XP_015955484.1|3.9e-12890.80PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Arachis dur... [more]
gi|566154928|ref|XP_006370686.1|1.3e-12689.96hypothetical protein POPTR_0001s44880g [Populus trichocarpa][more]
gi|802588265|ref|XP_012070790.1|2.1e-12689.56PREDICTED: vacuolar protein sorting-associated protein 22 homolog 1 [Jatropha cu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007286EAP30
IPR011991Winged helix-turn-helix DNA-binding domain
IPR016689ESCRT-2_cplx_Snf8
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
biological_process GO:0071985 multivesicular body sorting pathway
cellular_component GO:0005575 cellular_component
cellular_component GO:0000814 ESCRT II complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G005500.1ClCG10G005500.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007286EAP30PANTHERPTHR12806EAP30 SUBUNIT OF ELL COMPLEXcoord: 1..245
score: 1.2E
IPR007286EAP30PFAMPF04157EAP30coord: 6..225
score: 2.2
IPR011991Winged helix-turn-helix DNA-binding domainGENE3DG3DSA:1.10.10.10coord: 91..171
score: 1.6E-34coord: 172..241
score: 5.6
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 175..238
score: 6.96E-16coord: 24..174
score: 6.35
IPR016689ESCRT-2 complex, Snf8PIRPIRSF017215ESCRT2_Vps22coord: 1..245
score: 8.6
NoneNo IPR availableunknownCoilCoilcoord: 13..33
scor
NoneNo IPR availablePANTHERPTHR12806:SF0VACUOLAR-SORTING PROTEIN SNF8coord: 1..245
score: 1.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG10G005500Csa3G077720Cucumber (Chinese Long) v2cuwcgB189
ClCG10G005500Cla005300Watermelon (97103) v1wcgwmB052
ClCG10G005500Cla97C10G189730Watermelon (97103) v2wcgwmbB038
ClCG10G005500Bhi11G000491Wax gourdwcgwgoB080
ClCG10G005500CSPI03G05220Wild cucumber (PI 183967)cpiwcgB190
ClCG10G005500Cucsa.059860Cucumber (Gy14) v1cgywcgB049
ClCG10G005500CmaCh04G009510Cucurbita maxima (Rimu)cmawcgB611
ClCG10G005500CmoCh04G010210Cucurbita moschata (Rifu)cmowcgB612
ClCG10G005500Lsi05G006080Bottle gourd (USVL1VR-Ls)lsiwcgB318
ClCG10G005500Cp4.1LG01g08080Cucurbita pepo (Zucchini)cpewcgB349
ClCG10G005500Carg00064Silver-seed gourdcarwcgB0640
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG10G005500Watermelon (Charleston Gray)wcgwcgB053
ClCG10G005500Cucurbita maxima (Rimu)cmawcgB013
ClCG10G005500Cucurbita maxima (Rimu)cmawcgB283
ClCG10G005500Cucurbita maxima (Rimu)cmawcgB614
ClCG10G005500Cucurbita moschata (Rifu)cmowcgB006
ClCG10G005500Cucurbita moschata (Rifu)cmowcgB274
ClCG10G005500Cucurbita moschata (Rifu)cmowcgB615
ClCG10G005500Melon (DHL92) v3.5.1mewcgB412
ClCG10G005500Cucurbita pepo (Zucchini)cpewcgB001
ClCG10G005500Cucurbita pepo (Zucchini)cpewcgB347
ClCG10G005500Cucurbita pepo (Zucchini)cpewcgB692
ClCG10G005500Cucumber (Gy14) v2cgybwcgB174
ClCG10G005500Melon (DHL92) v3.6.1medwcgB403
ClCG10G005500Silver-seed gourdcarwcgB0641
ClCG10G005500Silver-seed gourdcarwcgB0881
ClCG10G005500Cucumber (Chinese Long) v3cucwcgB194