Cp4.1LG01g06810 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g06810
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Homeobox-leucine zipper family protein
Location	Cp4.1LG01 : 3928387 .. 3930131 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACTAATATCCGATACCAAAAAAACCGTGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATGAACCAGCAAGAGAGTGAAGAGCATGAAGCAGTACAAATGTGTGAGTTGTACACTCCATTATACATCCAAATGCTTCCCCAACAACAAGGTTTCTACCTCTTCTTTTAACTTTACCCAAAACTCTATTTTCTTTTTCTTCAATTTTGATGTTCTCAATGCAACGGAAATTTGGTTTTGGTTACAGATAATAATTTGGTTGAAGCAAAACGGAGACGACGTCGTAAGAAGAACAGAGGATCGGAAGCGGATGCGGTGGCAAAGAAGAGGAAGCTCACAGCCGCGCAGGTTCATCTTTTGGAGACTAATTTTGGGAGTGAACATAAGTTGGAGTCGGAAAGAAAGGACCGTCTCGCGTCCGAGTTAGGGCTCGATCCTCGCCAGGTCGCCGTCTGGTTTCAGAACCGCCGTGCCCGCTGGAAGAACAAGAAACTTGAGGAGGAATATTCTAGCTTGAAGAAGCTTCATGAATCCGTCGTCGTTGAAAAATGCCGTCTTGAAACTCAGGTCCATTTTCACCCTTTCTCTCTCTGTCTCTCCTGCTGGTTTTCGTCTTTCCAGACACAACCAAACATTTTCTATTATTATTTTATAATTCAATATAATAAATAATTATTTAAAAAATTAAAAAAAAAAAACACATATTATAATTTTAAAGTTAGTTAGTTAATAACACATTTACTATTTTTCAATTTTTGTAACTGAATAGAGTAAAATCTATGTTGGCTTAATTTTTATATTAAAAAAAAAAAAAAAAACAGGAATTTGAGTACATCTCCATCAACCGAAAGGTGTTATTAGAGGAGAAAAAGCTTGGTAACTTTGGGTGATAAAGAGAGGGTGGGACACCATTTATGAACCAACGTGCATGGGCTCTGGGCTCGAAGAAGCCCACGCCACCTTCTTCAAAATATGTTTTTTTTTATTTCTTTTCTTTTCTTTTTCTTTTTACGAAAATAATAAAACTTTCCATAACCCAATTGCCTTACTACAACACCATCTCATTGGACAATAAAACTCTTTTTTTAAAAACAAACAAAAAAAAAAAAAACTAAAGTTATAAAAGTAATTATAAAGTGTTTCGTACAACGTTGTCCGTGTTTCTATGGGCCATCGGCCCACTTTGGTCCCCCTCACTTCTACATTGCACCAATCAAGACTCAACAACACCCATGGAGATAATTAACTTTTACCCTACTAACTAAACAATTTTATTACTTTTACCCATTTAAATATACCGAAAAATAAAACTATTTAACCATTTCTTTTAGTAAACAAAGATAAGCAAAAAAGTAAGGTTAATTTGTTGGTGATGATTTTACAGATACTGAAGCTGAAAGAACAACTTTCAGAAGTGGAGAAAGAAAAGGAGAGGTTGATAATGGGAGAACGGGGCGATGGGCCTTTAAGCAGCAGCAGCCCAAGCCCATCGATGTCAATGGACGCCGTCGACCCTACAGGCCTTGGGGAATTTGGAGCATCATTCGAAGATGTGTTCTATTACATGCCTGAAAACTCTTGCATTTATGGCATGGAATGGCCCAATCCCTATATTTGATATTATATTTTAGTTTTACTAATAATTCCATCTTAATTTATAAATGTATTATTATTATTATTATTATTATTAATGTTTTCTTTTTCTTTCTCTTTTTGTATAAAATTTATGAATCTAGTGTA

mRNA sequence

CAACTAATATCCGATACCAAAAAAACCGTGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATGAACCAGCAAGAGAGTGAAGAGCATGAAGCAGTACAAATGTGTGAGTTGTACACTCCATTATACATCCAAATGCTTCCCCAACAACAAGATAATAATTTGGTTGAAGCAAAACGGAGACGACGTCGTAAGAAGAACAGAGGATCGGAAGCGGATGCGGTGGCAAAGAAGAGGAAGCTCACAGCCGCGCAGGTTCATCTTTTGGAGACTAATTTTGGGAGTGAACATAAGTTGGAGTCGGAAAGAAAGGACCGTCTCGCGTCCGAGTTAGGGCTCGATCCTCGCCAGGTCGCCGTCTGGTTTCAGAACCGCCGTGCCCGCTGGAAGAACAAGAAACTTGAGGAGGAATATTCTAGCTTGAAGAAGCTTCATGAATCCGTCGTCGTTGAAAAATGCCGTCTTGAAACTCAGATACTGAAGCTGAAAGAACAACTTTCAGAAGTGGAGAAAGAAAAGGAGAGGTTGATAATGGGAGAACGGGGCGATGGGCCTTTAAGCAGCAGCAGCCCAAGCCCATCGATGTCAATGGACGCCGTCGACCCTACAGGCCTTGGGGAATTTGGAGCATCATTCGAAGATGTGTTCTATTACATGCCTGAAAACTCTTGCATTTATGGCATGGAATGGCCCAATCCCTATATTTGATATTATATTTTAGTTTTACTAATAATTCCATCTTAATTTATAAATGTATTATTATTATTATTATTATTATTAATGTTTTCTTTTTCTTTCTCTTTTTGTATAAAATTTATGAATCTAGTGTA

Coding sequence (CDS)

ATGAACCAGCAAGAGAGTGAAGAGCATGAAGCAGTACAAATGTGTGAGTTGTACACTCCATTATACATCCAAATGCTTCCCCAACAACAAGATAATAATTTGGTTGAAGCAAAACGGAGACGACGTCGTAAGAAGAACAGAGGATCGGAAGCGGATGCGGTGGCAAAGAAGAGGAAGCTCACAGCCGCGCAGGTTCATCTTTTGGAGACTAATTTTGGGAGTGAACATAAGTTGGAGTCGGAAAGAAAGGACCGTCTCGCGTCCGAGTTAGGGCTCGATCCTCGCCAGGTCGCCGTCTGGTTTCAGAACCGCCGTGCCCGCTGGAAGAACAAGAAACTTGAGGAGGAATATTCTAGCTTGAAGAAGCTTCATGAATCCGTCGTCGTTGAAAAATGCCGTCTTGAAACTCAGATACTGAAGCTGAAAGAACAACTTTCAGAAGTGGAGAAAGAAAAGGAGAGGTTGATAATGGGAGAACGGGGCGATGGGCCTTTAAGCAGCAGCAGCCCAAGCCCATCGATGTCAATGGACGCCGTCGACCCTACAGGCCTTGGGGAATTTGGAGCATCATTCGAAGATGTGTTCTATTACATGCCTGAAAACTCTTGCATTTATGGCATGGAATGGCCCAATCCCTATATTTGA

Protein sequence

MNQQESEEHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEADAVAKKRKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDAVDPTGLGEFGASFEDVFYYMPENSCIYGMEWPNPYI

Homology

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BLAST of Cp4.1LG01g06810 vs. Swiss-Prot
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=3)

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-44
Identity = 109/222 (49.10%), Postives = 154/222 (69.37%), Query Frame = 1


Query: 1   MNQQESEEHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEADA---VAKK 60
           MN    +++ A  + +LY  +Y Q++   Q   + + KRRR++ K   + AD    + +K
Sbjct: 1   MNYTVDDQNMAF-ISQLYPDVYTQIV---QPGEVKQPKRRRKKTKGSVASADGGNGLFRK 60

Query: 61  RKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY 120
           RKLT  QV++LE +FG EHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY
Sbjct: 61  RKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEY 120

Query: 121 SSLKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMD 180
           + LK  H++VVV+KCRLE+++++LKEQL + E+E +RL   ER +G  S+S  S S+S++
Sbjct: 121 NKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRL--AERVEGGSSNSPISSSVSVE 180

Query: 181 AVDPTGLGEF-----GASFEDVFYYMPENSCIYGMEWPNPYI 215
           A +    G++     G  ++ +FY +PENS I   EW + YI
Sbjct: 181 ANETPFFGDYKVGDDGDDYDHLFYPVPENSYIDEAEWMSLYI 216

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BLAST of Cp4.1LG01g06810 vs. Swiss-Prot
Match: ATB21_ARATH (Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.8e-39
Identity = 103/228 (45.18%), Postives = 148/228 (64.91%), Query Frame = 1


Query: 1   MNQQESEEHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGS---------EA 60
           MN Q  ++H  + + +LY  +Y  ++PQQ      EAK  RRRK+   S         E 
Sbjct: 1   MNNQNVDDHNLLLISQLYPNVYTPLVPQQGG----EAKPTRRRKRKSKSVVVAEEGENEG 60

Query: 61  DAVAKKRKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK 120
           +   +KRKL+  QV +LE +F  +HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK
Sbjct: 61  NGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK 120

Query: 121 KLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPS 180
           ++E+EY+ LK  +E+ VVEKCRL+++++ LKEQL E E+E +RL   +R +G LS+S  S
Sbjct: 121 RVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRL--AKRVEGTLSNSPIS 180

Query: 181 PSMSMDAVDPTG-LGEFGASF----EDVFYYMPENSCIYGMEWPNPYI 215
            S++++A   T   G++   F    ++   Y P+   I G++W + ++
Sbjct: 181 SSVTIEANHTTPFFGDYDIGFDGEADENLLYSPD--YIDGLDWMSQFM 220

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BLAST of Cp4.1LG01g06810 vs. Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.7e-35
Identity = 91/187 (48.66%), Postives = 131/187 (70.05%), Query Frame = 1


Query: 39  RRRRRKKNRGSEAD---------AVAKKRKLTAAQVHLLETNFGSEHKLESERKDRLASE 98
           +RRR+++++GS A           + +KRKLT  QV++LE +FG+EHKLES RK+++A E
Sbjct: 45  KRRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGE 104

Query: 99  LGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSEVE 158
           LGLDPRQVAVWFQNRRARWKNKKLEEEY+ LK  H++VV+ +C+LE+QILKL EQLSE +
Sbjct: 105 LGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQ 164

Query: 159 KEKERLIMGERGDGPLSSSSPSPSMSMDAVD-PTGLGEFGASFEDVFYYMPENSCIYGME 215
            E  +L   ER +  + ++S S S+S++A + PT       +  ++ +YM +N+ +  ME
Sbjct: 165 SEIRKL--SERLE-EMPTNSSSSSLSVEANNAPTDFELAPETNYNIPFYMLDNNYLQSME 224

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BLAST of Cp4.1LG01g06810 vs. Swiss-Prot
Match: HOX12_ORYSJ (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica GN=HOX12 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.3e-27
Identity = 84/183 (45.90%), Postives = 113/183 (61.75%), Query Frame = 1


Query: 36  EAKRRRRRKKNRGSEA--------DAVAKKRKLTAAQVHLLETNFGSEHKLESERKDRLA 95
           +A++RRRRK    + A        D  AKKR+L+  Q   LE +F  E KLE+ RK +LA
Sbjct: 33  KARQRRRRKVKPEAAAALAGESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLA 92

Query: 96  SELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSE 155
           +ELGLD +QVAVWFQNRRAR K+K +EEE++ L+  H++VV++ C LET++LKLKE+L++
Sbjct: 93  AELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVLQNCHLETELLKLKERLAD 152

Query: 156 VEKEKERLIM-------GERGDGPLSSSSPSPSMSMDAVDPTGLGEFG---ASFEDVFYY 201
           VE+EK +L         G  G G  SSS  S S S     P   G+FG   A+ E    Y
Sbjct: 153 VEEEKAKLAAVAAATTGGGGGGGGGSSSPTSSSFSTVTYHPALAGQFGVEAAAEEADLTY 212

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BLAST of Cp4.1LG01g06810 vs. Swiss-Prot
Match: HOX12_ORYSI (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica GN=HOX12 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.3e-27
Identity = 84/183 (45.90%), Postives = 113/183 (61.75%), Query Frame = 1


Query: 36  EAKRRRRRKKNRGSEA--------DAVAKKRKLTAAQVHLLETNFGSEHKLESERKDRLA 95
           +A++RRRRK    + A        D  AKKR+L+  Q   LE +F  E KLE+ RK +LA
Sbjct: 33  KARQRRRRKVKPEAAAALAGESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLA 92

Query: 96  SELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSE 155
           +ELGLD +QVAVWFQNRRAR K+K +EEE++ L+  H++VV++ C LET++LKLKE+L++
Sbjct: 93  AELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAVVLQNCHLETELLKLKERLAD 152

Query: 156 VEKEKERLIM-------GERGDGPLSSSSPSPSMSMDAVDPTGLGEFG---ASFEDVFYY 201
           VE+EK +L         G  G G  SSS  S S S     P   G+FG   A+ E    Y
Sbjct: 153 VEEEKAKLAAVAAATTGGGGGGGGGSSSPTSSSFSTVTYHPVLAGQFGVEAAAEEADLTY 212

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BLAST of Cp4.1LG01g06810 vs. TrEMBL
Match: A0A0A0KWL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G043850 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 3.3e-82
Identity = 172/221 (77.83%), Postives = 193/221 (87.33%), Query Frame = 1


Query: 1   MNQQESE-EHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEADAVA--KK 60
           MNQQ+++ EH++VQ+ +LY  LYIQMLPQQ   +L E+K RRRRKKNRGSE +A +  KK
Sbjct: 1   MNQQQTDQEHQSVQISQLYNGLYIQMLPQQV--HLGESKPRRRRKKNRGSETEAASGGKK 60

Query: 61  RKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY 120
           RKLTAAQV LLE+NFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY
Sbjct: 61  RKLTAAQVRLLESNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY 120

Query: 121 SSLKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMD 180
           S+LKKLHESVVVEKCRLET++LKLKEQL EVEKEKER+ MGE GDGPLSSSSPSPSMSM+
Sbjct: 121 SNLKKLHESVVVEKCRLETELLKLKEQLLEVEKEKERVRMGEGGDGPLSSSSPSPSMSME 180

Query: 181 AVD---PTGLGEFGASF-EDVFYYMPENSCIYGMEWPNPYI 215
           A++   P  LGE    + EDVFYYMPEN CIYGMEWPNPY+
Sbjct: 181 AMEMEQPISLGEISPLYEEDVFYYMPENYCIYGMEWPNPYL 219

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BLAST of Cp4.1LG01g06810 vs. TrEMBL
Match: W9RLH1_9ROSA (Homeobox-leucine zipper protein ATHB-40 OS=Morus notabilis GN=L484_009043 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.5e-58
Identity = 135/218 (61.93%), Postives = 170/218 (77.98%), Query Frame = 1


Query: 1   MNQQESEEHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEAD--AVAKKR 60
           MN Q  E+H A+ + +LY  +Y QM+PQQ      EAK RRRR+KN+  E    A AKKR
Sbjct: 1   MNNQIDEDHMAL-ISQLYPGVYTQMVPQQG-----EAKPRRRRRKNKSGEGGGCAAAKKR 60

Query: 61  KLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 120
           KL++ QV+LLE NFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS
Sbjct: 61  KLSSEQVNLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 120

Query: 121 SLKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDA 180
           +LKK+H++VVVEKCRLE+++L+LKEQ+ + +KE +RL   ER +G +SS+SPS S+S++A
Sbjct: 121 TLKKMHDNVVVEKCRLESEVLQLKEQIMDAKKEIQRL--AERAEG-VSSNSPSSSLSVEA 180

Query: 181 VDPTGLGEFGASFE--DVFYYMPENSCIYGMEWPNPYI 215
           V+P  LGEFG   E  D  +Y  EN+ I+GMEW N Y+
Sbjct: 181 VEPPFLGEFGVVSEGYDNMFYAAENNYIHGMEWVNLYL 209

[Close]

BLAST of Cp4.1LG01g06810 vs. TrEMBL
Match: A0A067KIZ9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12260 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 9.7e-58
Identity = 134/205 (65.37%), Postives = 157/205 (76.59%), Query Frame = 1


Query: 8   EHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEADAV-AKKRKLTAAQVH 67
           E   V + +LY  +Y QM+PQQ      EAK RRRRKKN+G E     AKKRKL++ QV+
Sbjct: 10  EDHMVLLSQLYPGVYTQMVPQQG-----EAKPRRRRKKNKGGEGGVGGAKKRKLSSEQVN 69

Query: 68  LLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHES 127
           LLE NFG+EHKLESERKD+LASELGLDPRQVAVWFQNRRARWKNKKLEEEY+ LK  HES
Sbjct: 70  LLEKNFGNEHKLESERKDKLASELGLDPRQVAVWFQNRRARWKNKKLEEEYTKLKTAHES 129

Query: 128 VVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDAVDPTGLGE 187
           +VVEKCRLE+++LKLKEQLSE E E  RL   ER DG +SS+SPS ++SM+A+ PT LGE
Sbjct: 130 IVVEKCRLESEVLKLKEQLSEAENEIHRLT--ERIDG-VSSNSPSSTLSMEAMKPTFLGE 189

Query: 188 FGASFEDVFYYMPENSCIYGMEWPN 212
           FG       +YMPEN  I+GMEW N
Sbjct: 190 FGMEGYGDIFYMPENYYIHGMEWFN 206

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BLAST of Cp4.1LG01g06810 vs. TrEMBL
Match: A0A068U2N9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040311001 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.4e-56
Identity = 131/208 (62.98%), Postives = 160/208 (76.92%), Query Frame = 1


Query: 8   EHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEADAVA-KKRKLTAAQVH 67
           + + V + + Y  +Y Q+ P +Q     E K RRRRKKNRG E+ +   +KRKL+  QV+
Sbjct: 10  DQQMVLISQYYPGIYSQLAPAEQG----EVKSRRRRKKNRGGESSSSGVRKRKLSQEQVN 69

Query: 68  LLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHES 127
           LLE NFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWK+KKLEEEYS LK  HE+
Sbjct: 70  LLEINFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKSKKLEEEYSKLKSEHEN 129

Query: 128 VVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDAVDPTGLGE 187
            VVEKCRLET++LKLKEQ+SE EKE +RL+  ER DG +SS+SPS S SM+A++P  LGE
Sbjct: 130 TVVEKCRLETEVLKLKEQVSEAEKEIQRLL--ERSDG-VSSNSPSSSFSMEAIEPPFLGE 189

Query: 188 FG-ASFEDVFYYMPENSCIYGMEWPNPY 214
           FG   FE+VF Y+PE + + G+EW N Y
Sbjct: 190 FGMEGFENVF-YVPETNYVNGLEWVNIY 209

[Close]

BLAST of Cp4.1LG01g06810 vs. TrEMBL
Match: A0A061DFY2_THECC (Homeobox protein, putative OS=Theobroma cacao GN=TCM_000438 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 6.5e-54
Identity = 130/213 (61.03%), Postives = 158/213 (74.18%), Query Frame = 1


Query: 1   MNQQESEEHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEAD-AVAKKRK 60
           +   E E+H A+ + ++Y  +Y Q+ P Q      E+K RRRRKKN+G E   A AKKRK
Sbjct: 5   IQMNELEDHMAL-ISQMYPGVYTQIAPHQG-----ESKPRRRRKKNKGGENSLAGAKKRK 64

Query: 61  LTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSS 120
           L+  QV+LLE NF  EHKLESERKDRLAS+LGLDPRQVAVWFQNRRARWKNKKLEEEY+ 
Sbjct: 65  LSQEQVNLLEHNFSDEHKLESERKDRLASDLGLDPRQVAVWFQNRRARWKNKKLEEEYNK 124

Query: 121 LKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDAV 180
           LK +HE  V++KC LE+++LKLK QL E EKE +RL   ER DG +SS+SPS S+SM+A+
Sbjct: 125 LKTVHEGAVLDKCHLESEVLKLKGQLCEAEKEIQRL--AERVDG-VSSNSPSSSLSMEAM 184

Query: 181 DPTGLGEFGASFEDVFYYMPENSCIYGME-WPN 212
           DP  LGEFG    D  +YMPENS I+GME W N
Sbjct: 185 DPPFLGEFGVEGYDDVFYMPENSYIHGMEYWMN 208

[Close]

BLAST of Cp4.1LG01g06810 vs. TAIR10
Match: AT4G36740.1 (AT4G36740.1 homeobox protein 40)

HSP 1 Score: 181.0 bits (458), Expect = 7.6e-46
Identity = 109/222 (49.10%), Postives = 154/222 (69.37%), Query Frame = 1


Query: 1   MNQQESEEHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEADA---VAKK 60
           MN    +++ A  + +LY  +Y Q++   Q   + + KRRR++ K   + AD    + +K
Sbjct: 1   MNYTVDDQNMAF-ISQLYPDVYTQIV---QPGEVKQPKRRRKKTKGSVASADGGNGLFRK 60

Query: 61  RKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY 120
           RKLT  QV++LE +FG EHKLESERKDRLA+ELGLDPRQVAVWFQNRRARWKNK+LEEEY
Sbjct: 61  RKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEEY 120

Query: 121 SSLKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMD 180
           + LK  H++VVV+KCRLE+++++LKEQL + E+E +RL   ER +G  S+S  S S+S++
Sbjct: 121 NKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREIQRL--AERVEGGSSNSPISSSVSVE 180

Query: 181 AVDPTGLGEF-----GASFEDVFYYMPENSCIYGMEWPNPYI 215
           A +    G++     G  ++ +FY +PENS I   EW + YI
Sbjct: 181 ANETPFFGDYKVGDDGDDYDHLFYPVPENSYIDEAEWMSLYI 216

[Close]

BLAST of Cp4.1LG01g06810 vs. TAIR10
Match: AT2G18550.1 (AT2G18550.1 homeobox protein 21)

HSP 1 Score: 162.9 bits (411), Expect = 2.1e-40
Identity = 103/228 (45.18%), Postives = 148/228 (64.91%), Query Frame = 1


Query: 1   MNQQESEEHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGS---------EA 60
           MN Q  ++H  + + +LY  +Y  ++PQQ      EAK  RRRK+   S         E 
Sbjct: 1   MNNQNVDDHNLLLISQLYPNVYTPLVPQQGG----EAKPTRRRKRKSKSVVVAEEGENEG 60

Query: 61  DAVAKKRKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK 120
           +   +KRKL+  QV +LE +F  +HKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK
Sbjct: 61  NGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNK 120

Query: 121 KLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPS 180
           ++E+EY+ LK  +E+ VVEKCRL+++++ LKEQL E E+E +RL   +R +G LS+S  S
Sbjct: 121 RVEDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRL--AKRVEGTLSNSPIS 180

Query: 181 PSMSMDAVDPTG-LGEFGASF----EDVFYYMPENSCIYGMEWPNPYI 215
            S++++A   T   G++   F    ++   Y P+   I G++W + ++
Sbjct: 181 SSVTIEANHTTPFFGDYDIGFDGEADENLLYSPD--YIDGLDWMSQFM 220

[Close]

BLAST of Cp4.1LG01g06810 vs. TAIR10
Match: AT5G66700.1 (AT5G66700.1 homeobox 53)

HSP 1 Score: 148.3 bits (373), Expect = 5.5e-36
Identity = 91/187 (48.66%), Postives = 131/187 (70.05%), Query Frame = 1


Query: 39  RRRRRKKNRGSEAD---------AVAKKRKLTAAQVHLLETNFGSEHKLESERKDRLASE 98
           +RRR+++++GS A           + +KRKLT  QV++LE +FG+EHKLES RK+++A E
Sbjct: 45  KRRRKRRSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGE 104

Query: 99  LGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHESVVVEKCRLETQILKLKEQLSEVE 158
           LGLDPRQVAVWFQNRRARWKNKKLEEEY+ LK  H++VV+ +C+LE+QILKL EQLSE +
Sbjct: 105 LGLDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQ 164

Query: 159 KEKERLIMGERGDGPLSSSSPSPSMSMDAVD-PTGLGEFGASFEDVFYYMPENSCIYGME 215
            E  +L   ER +  + ++S S S+S++A + PT       +  ++ +YM +N+ +  ME
Sbjct: 165 SEIRKL--SERLE-EMPTNSSSSSLSVEANNAPTDFELAPETNYNIPFYMLDNNYLQSME 224

[Close]

BLAST of Cp4.1LG01g06810 vs. TAIR10
Match: AT3G01470.1 (AT3G01470.1 homeobox 1)

HSP 1 Score: 98.2 bits (243), Expect = 6.5e-21
Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 1


Query: 56  KKRKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 115
           KKR+LT  QVHLLE +F +E+KLE ERK +LA +LGL PRQVAVWFQNRRARWK K+LE 
Sbjct: 68  KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127

Query: 116 EYSSLKKL-------HESVVVEKCRLETQILKLKEQL 146
           +Y  LK         ++S+V++  +L +++  L E+L
Sbjct: 128 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKL 164

[Close]

BLAST of Cp4.1LG01g06810 vs. TAIR10
Match: AT5G03790.1 (AT5G03790.1 homeobox 51)

HSP 1 Score: 87.8 bits (216), Expect = 8.8e-18
Identity = 49/103 (47.57%), Postives = 72/103 (69.90%), Query Frame = 1


Query: 56  KKRKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEE 115
           KK++LT+ Q+  LE +F  E KL+S+RK +L+ ELGL PRQ+AVWFQNRRARWK K+LE+
Sbjct: 77  KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQ 136

Query: 116 EYSSLKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMG 159
            Y SL++ ++ V  EK  L  ++ KL+  L +    K+++  G
Sbjct: 137 LYDSLRQEYDVVSREKQMLHDEVKKLRALLRDQGLIKKQISAG 179

[Close]

BLAST of Cp4.1LG01g06810 vs. NCBI nr
Match: gi|659107539|ref|XP_008453727.1| (PREDICTED: homeobox-leucine zipper protein ATHB-40 [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 6.4e-87
Identity = 177/219 (80.82%), Postives = 195/219 (89.04%), Query Frame = 1


Query: 1   MNQQESEEHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEADAVA--KKR 60
           MNQQ++EEH++VQ+ +LY  LYIQMLPQQ   NL E+K RRRRKKNRGSE +A +  KKR
Sbjct: 1   MNQQQTEEHQSVQISQLYNGLYIQMLPQQ--GNLGESKPRRRRKKNRGSETEASSGGKKR 60

Query: 61  KLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 120
           KLTAAQVHLLE+NFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS
Sbjct: 61  KLTAAQVHLLESNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 120

Query: 121 SLKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDA 180
           +LKKLHESVVVEKCRLET++LKLKEQL EVEKEKER+IMGER DGPLSSSSPSPSMSM+A
Sbjct: 121 NLKKLHESVVVEKCRLETELLKLKEQLIEVEKEKERVIMGERADGPLSSSSPSPSMSMEA 180

Query: 181 --VDPTGLGEFGASF-EDVFYYMPENSCIYGMEWPNPYI 215
             +DP  LGE    + EDVFYYMPEN CIYGMEWPNPY+
Sbjct: 181 MEMDPISLGEISPLYEEDVFYYMPENYCIYGMEWPNPYL 217

[Close]

BLAST of Cp4.1LG01g06810 vs. NCBI nr
Match: gi|449457492|ref|XP_004146482.1| (PREDICTED: homeobox-leucine zipper protein ATHB-40-like [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 4.7e-82
Identity = 172/221 (77.83%), Postives = 193/221 (87.33%), Query Frame = 1


Query: 1   MNQQESE-EHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEADAVA--KK 60
           MNQQ+++ EH++VQ+ +LY  LYIQMLPQQ   +L E+K RRRRKKNRGSE +A +  KK
Sbjct: 1   MNQQQTDQEHQSVQISQLYNGLYIQMLPQQV--HLGESKPRRRRKKNRGSETEAASGGKK 60

Query: 61  RKLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY 120
           RKLTAAQV LLE+NFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY
Sbjct: 61  RKLTAAQVRLLESNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEY 120

Query: 121 SSLKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMD 180
           S+LKKLHESVVVEKCRLET++LKLKEQL EVEKEKER+ MGE GDGPLSSSSPSPSMSM+
Sbjct: 121 SNLKKLHESVVVEKCRLETELLKLKEQLLEVEKEKERVRMGEGGDGPLSSSSPSPSMSME 180

Query: 181 AVD---PTGLGEFGASF-EDVFYYMPENSCIYGMEWPNPYI 215
           A++   P  LGE    + EDVFYYMPEN CIYGMEWPNPY+
Sbjct: 181 AMEMEQPISLGEISPLYEEDVFYYMPENYCIYGMEWPNPYL 219

[Close]

BLAST of Cp4.1LG01g06810 vs. NCBI nr
Match: gi|703111325|ref|XP_010099829.1| (Homeobox-leucine zipper protein ATHB-40 [Morus notabilis])

HSP 1 Score: 233.4 bits (594), Expect = 3.7e-58
Identity = 135/218 (61.93%), Postives = 170/218 (77.98%), Query Frame = 1


Query: 1   MNQQESEEHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEAD--AVAKKR 60
           MN Q  E+H A+ + +LY  +Y QM+PQQ      EAK RRRR+KN+  E    A AKKR
Sbjct: 1   MNNQIDEDHMAL-ISQLYPGVYTQMVPQQG-----EAKPRRRRRKNKSGEGGGCAAAKKR 60

Query: 61  KLTAAQVHLLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 120
           KL++ QV+LLE NFG+EHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS
Sbjct: 61  KLSSEQVNLLEMNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYS 120

Query: 121 SLKKLHESVVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDA 180
           +LKK+H++VVVEKCRLE+++L+LKEQ+ + +KE +RL   ER +G +SS+SPS S+S++A
Sbjct: 121 TLKKMHDNVVVEKCRLESEVLQLKEQIMDAKKEIQRL--AERAEG-VSSNSPSSSLSVEA 180

Query: 181 VDPTGLGEFGASFE--DVFYYMPENSCIYGMEWPNPYI 215
           V+P  LGEFG   E  D  +Y  EN+ I+GMEW N Y+
Sbjct: 181 VEPPFLGEFGVVSEGYDNMFYAAENNYIHGMEWVNLYL 209

[Close]

BLAST of Cp4.1LG01g06810 vs. NCBI nr
Match: gi|643721920|gb|KDP31799.1| (hypothetical protein JCGZ_12260 [Jatropha curcas])

HSP 1 Score: 231.5 bits (589), Expect = 1.4e-57
Identity = 134/205 (65.37%), Postives = 157/205 (76.59%), Query Frame = 1


Query: 8   EHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEADAV-AKKRKLTAAQVH 67
           E   V + +LY  +Y QM+PQQ      EAK RRRRKKN+G E     AKKRKL++ QV+
Sbjct: 10  EDHMVLLSQLYPGVYTQMVPQQG-----EAKPRRRRKKNKGGEGGVGGAKKRKLSSEQVN 69

Query: 68  LLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHES 127
           LLE NFG+EHKLESERKD+LASELGLDPRQVAVWFQNRRARWKNKKLEEEY+ LK  HES
Sbjct: 70  LLEKNFGNEHKLESERKDKLASELGLDPRQVAVWFQNRRARWKNKKLEEEYTKLKTAHES 129

Query: 128 VVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDAVDPTGLGE 187
           +VVEKCRLE+++LKLKEQLSE E E  RL   ER DG +SS+SPS ++SM+A+ PT LGE
Sbjct: 130 IVVEKCRLESEVLKLKEQLSEAENEIHRLT--ERIDG-VSSNSPSSTLSMEAMKPTFLGE 189

Query: 188 FGASFEDVFYYMPENSCIYGMEWPN 212
           FG       +YMPEN  I+GMEW N
Sbjct: 190 FGMEGYGDIFYMPENYYIHGMEWFN 206

[Close]

BLAST of Cp4.1LG01g06810 vs. NCBI nr
Match: gi|802640916|ref|XP_012079075.1| (PREDICTED: homeobox-leucine zipper protein ATHB-40 [Jatropha curcas])

HSP 1 Score: 231.5 bits (589), Expect = 1.4e-57
Identity = 134/205 (65.37%), Postives = 157/205 (76.59%), Query Frame = 1


Query: 8   EHEAVQMCELYTPLYIQMLPQQQDNNLVEAKRRRRRKKNRGSEADAV-AKKRKLTAAQVH 67
           E   V + +LY  +Y QM+PQQ      EAK RRRRKKN+G E     AKKRKL++ QV+
Sbjct: 43  EDHMVLLSQLYPGVYTQMVPQQG-----EAKPRRRRKKNKGGEGGVGGAKKRKLSSEQVN 102

Query: 68  LLETNFGSEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSSLKKLHES 127
           LLE NFG+EHKLESERKD+LASELGLDPRQVAVWFQNRRARWKNKKLEEEY+ LK  HES
Sbjct: 103 LLEKNFGNEHKLESERKDKLASELGLDPRQVAVWFQNRRARWKNKKLEEEYTKLKTAHES 162

Query: 128 VVVEKCRLETQILKLKEQLSEVEKEKERLIMGERGDGPLSSSSPSPSMSMDAVDPTGLGE 187
           +VVEKCRLE+++LKLKEQLSE E E  RL   ER DG +SS+SPS ++SM+A+ PT LGE
Sbjct: 163 IVVEKCRLESEVLKLKEQLSEAENEIHRLT--ERIDG-VSSNSPSSTLSMEAMKPTFLGE 222

Query: 188 FGASFEDVFYYMPENSCIYGMEWPN 212
           FG       +YMPEN  I+GMEW N
Sbjct: 223 FGMEGYGDIFYMPENYYIHGMEWFN 239

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g06810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATB40_ARATH	1.3e-44	49.10	Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 ...	[more]
ATB21_ARATH	3.8e-39	45.18	Homeobox-leucine zipper protein ATHB-21 OS=Arabidopsis thaliana GN=ATHB-21 PE=2 ...	[more]
ATB53_ARATH	9.7e-35	48.66	Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 ...	[more]
HOX12_ORYSJ	3.3e-27	45.90	Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica GN=HOX12 P...	[more]
HOX12_ORYSI	3.3e-27	45.90	Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica GN=HOX12 PE=...	[more]

BLAST of Cp4.1LG01g06810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWL3_CUCSA	3.3e-82	77.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G043850 PE=4 SV=1	[more]
W9RLH1_9ROSA	2.5e-58	61.93	Homeobox-leucine zipper protein ATHB-40 OS=Morus notabilis GN=L484_009043 PE=4 S...	[more]
A0A067KIZ9_JATCU	9.7e-58	65.37	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12260 PE=4 SV=1	[more]
A0A068U2N9_COFCA	2.4e-56	62.98	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00040311001 PE=4 SV=1	[more]
A0A061DFY2_THECC	6.5e-54	61.03	Homeobox protein, putative OS=Theobroma cacao GN=TCM_000438 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g06810 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G36740.1	7.6e-46	49.10	homeobox protein 40	[more]
AT2G18550.1	2.1e-40	45.18	homeobox protein 21	[more]
AT5G66700.1	5.5e-36	48.66	homeobox 53	[more]
AT3G01470.1	6.5e-21	53.61	homeobox 1	[more]
AT5G03790.1	8.8e-18	47.57	homeobox 51	[more]

BLAST of Cp4.1LG01g06810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107539\|ref\|XP_008453727.1\|	6.4e-87	80.82	PREDICTED: homeobox-leucine zipper protein ATHB-40 [Cucumis melo]	[more]
gi\|449457492\|ref\|XP_004146482.1\|	4.7e-82	77.83	PREDICTED: homeobox-leucine zipper protein ATHB-40-like [Cucumis sativus]	[more]
gi\|703111325\|ref\|XP_010099829.1\|	3.7e-58	61.93	Homeobox-leucine zipper protein ATHB-40 [Morus notabilis]	[more]
gi\|643721920\|gb\|KDP31799.1\|	1.4e-57	65.37	hypothetical protein JCGZ_12260 [Jatropha curcas]	[more]
gi\|802640916\|ref\|XP_012079075.1\|	1.4e-57	65.37	PREDICTED: homeobox-leucine zipper protein ATHB-40 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR017970	Homeobox_CS
IPR009057	Homeobox-like_sf
IPR001356	Homeobox_dom
IPR000047	HTH_motif

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g06810.1	Cp4.1LG01g06810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 82..91 score: 1.3E-5coord: 91..107 score: 1.
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 56..110 score: 5.9
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 54..115 score: 2.6
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 51..111 score: 16
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 58..118 score: 3.2
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 56..119 score: 2.87
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 86..109 scor
None	No IPR available	unknown	Coil	Coil	coord: 134..158 score: -coord: 103..130 scor
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 22..207 score: 1.1
None	No IPR available	PANTHER	PTHR24326:SF281	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATED	coord: 22..207 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g06810	Cucsa.201240	Cucumber (Gy14) v1	cgycpeB0569
Cp4.1LG01g06810	CmaCh04G007730	Cucurbita maxima (Rimu)	cmacpeB731
Cp4.1LG01g06810	CmoCh04G008280	Cucurbita moschata (Rifu)	cmocpeB684
Cp4.1LG01g06810	Cla014541	Watermelon (97103) v1	cpewmB420
Cp4.1LG01g06810	Csa4G043850	Cucumber (Chinese Long) v2	cpecuB400
Cp4.1LG01g06810	MELO3C017549	Melon (DHL92) v3.5.1	cpemeB424
Cp4.1LG01g06810	ClCG07G008960	Watermelon (Charleston Gray)	cpewcgB412
Cp4.1LG01g06810	CSPI04G05110	Wild cucumber (PI 183967)	cpecpiB397
Cp4.1LG01g06810	MELO3C032612.2	Melon (DHL92) v3.6.1	cpemedB496
Cp4.1LG01g06810	CsaV3_4G005240	Cucumber (Chinese Long) v3	cpecucB0497
Cp4.1LG01g06810	CsGy4G005010	Cucumber (Gy14) v2	cgybcpeB502
Cp4.1LG01g06810	Carg14172	Silver-seed gourd	carcpeB1303

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g06810	Silver-seed gourd	carcpeB1302
Cp4.1LG01g06810	Silver-seed gourd	carcpeB1418
Cp4.1LG01g06810	Wax gourd	cpewgoB0510
Cp4.1LG01g06810	Wax gourd	cpewgoB0522
Cp4.1LG01g06810	Cucurbita pepo (Zucchini)	cpecpeB233
Cp4.1LG01g06810	Cucurbita pepo (Zucchini)	cpecpeB237
Cp4.1LG01g06810	Cucurbita maxima (Rimu)	cmacpeB350
Cp4.1LG01g06810	Cucurbita maxima (Rimu)	cmacpeB354
Cp4.1LG01g06810	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g06810	Cucurbita moschata (Rifu)	cmocpeB316
Cp4.1LG01g06810	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g06810	Bottle gourd (USVL1VR-Ls)	cpelsiB373