Cp4.1LG01g06780 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g06780
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionHistone deacetylase complex subunit SAP30/SAP30-like protein
LocationCp4.1LG01 : 4088434 .. 4092629 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACACTCTCTCTCTCTCTCTCTCTCTCTTCGCCTCTTTTCCATTTTGCACATTTCAATGCTTCCTTCCTTCCTCTTACATTACACCTCTGTTTCTTCTTTGTCCCTTTGATCACTCACTCACTCCCTTCGCTCCATTTCTTCTGAAATTCCCATCTCTTCTTCCCTTCTAAATCTTCTCTCGTTTTCCTGTTTCTCATCTTCCAATCCGCCTCCATTCTGCTTCCATTCGAGGTATTGTAATCGAATCCCTCTGCATTTATTGCTGTATTGTAATGTTTCCTTTCTCTGCTTCTGTTTGTTTGGTGAACTCAGAGTGATTTGCCTGTTTTAATGGGGTTTTTCATTGTCAGTGAGCTTAAATCAAATACTAATTACGATTCTGTTTCTTTCTTTTTCTTGGGTTTTTTCATTGATGATTGTTTGTTCCCTGAAAACCCAAATTGAATGTGTTCTTCAAATGGGCATTTCTCGTTTACCTTATATATATTCTGCAATTTCCAAATGTAATATCGGTTTTCAGTTGACTTTGATGAGATATGCTTTCTTGACTTCTTGACTGTTGTCTAGGAAGATGCTGCGAAGGTTTCAGAAGGTTTTATTTATTTAATTTTCGAATTGGTAATTGGAGATTTTCATTCGATTCTGCGCAGAGATTGAATGATTTTCTTTTCCTTTGAAATTTTAGCTAATAAATTGAATGCTGGATTCTGTTTTTCCCCCTTTCTCTAAGCTTAGGAATTAAAAACATCATTTTCATCTATTCTGTCAGAAACACATATGTTCCATATTTTCATCGAGCTTCTTACTGTTTTCGTTCTTAGCTTGTCTTTTGGAAATATTAAGAATTATATGATTTATTCATATGGGAAGGGAATGTAAAAGCTGTTGGAACAATCAAACTTGCTAATCCATAGAAAATTCTCCAGTTCGTCTACGATCTATTTGCTCCAAATTGATATTTGGCTGTTGGGCGTCAATGAAATGAGGATATGATGTCATCATGTCACTTCTACTCGAGAGAATTCAAGGAAGAGCCTATTTATGAGCACCAAGCTTATCCTGTCTTGCCGTGGTTCATTTATTATCAGCACAATGTGCCCGTGAAGTATAGATATATTTACTACGCTTCTTCCATGCTAGGGCCATTTATCATTTCCTGATCTTGTTCGTGTAAACTACAGGTACTGCCACTCTTCTATAATCCCTCTTCCCCTTTTCCTGATACTGTTCTGCTTTTGTCTTTTACTACATATAATATAATATTCTTCAGGACTTCTTAATGGAGTTCAACATCTCTGAAGTTAGATTCCACTGACACAAACAAAATTCATAATGGCCTACTGATCAGCAAAAGAGGGTTGCTGCTTATTATTGCTCAAGTTGAGCATGAATTCTTGCACTATATGTGGGTCACAGGGCTTTNGGCCTACTGATCAGCAAAAGAGGGTTGCTGCTTATTATTGCTCGAGTTGAGCATGAATTCTTGCACTATATGTGGGTCACAGGGCTTTGGGGTATTTGGCTGCAATCTTGAAGTCTTCTGAACTTGTGTTCTTGTTTTGGTTAGGTTCTATTTGAGAAAAGACTTCTGAAAAACTTTCAAAGAANTGTGTTCTTGTTTTGGTTAGGTTCTATTTGAGAAAAGACTTCTCAAAAACTTTCAAAGAAGGGTTCAAAGAATGCTGGAACCGGAGTTTTGTGCTTCTAGAATTCAGTCTCCTTTTCGTGAGGAGAGTTGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGGAAATAACAGAACAAAGTCTGTTTTACTGGGATTGCAAGGCGTAGTTAAGAAGGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTATTCTCTTTTTCATCCTGTCTTTTCCCTTTGTTCTTCGTCTCTTATTTACCCTCTGTATTATGCATTTTTCTATCTGGCCATTTGCTTACTTGTCGTGAAAGTTACACCAAAAGTCATGACAATAACCAACTATGATTGGAGAAATGCTATTATTTTGTTTTAGCTCCTACGTTTCTAAGCTAGAAGCTTGTAATCAGAAGGAATTTATGAGTTATTCAAGTTCCACTTGATAAGTTTTCTGTTCTTAATAATTGTGCTTGCTTCTAATCTCCTTTAACAACACACTTGAGTCCATAGAAAGTTCCAAAAACAAAAACAATTGTTTCCATTTTCAAATTTTAGCTTAGATTTCTTATAGTATATAAGACGATTATCTGCGACTATTTCAATTTATCTCTGTGAATTTTGATTAAAGGCTTTGGAGATGATTTAGCTGTATGGTTGGAATGTTCCGACAAGGCTCCGCTTAACGGTCTCTTGCATGGCTCATTTCCTGTGCAAAAGAACGAAACTAGTTACCCTACCTCTGTTTGATTATTTAATGAATTCACTTCATTCGTTACCTCATGATCCTTAGTAGTAGGCTAAATTAGATTTCGACTATAAAGGAGTTTGATTTTTGCTGTGATGGACTCTTTCCATGTAAGGTTTTGAAAAATGGGGTTGAAGTGAAGCTGCAAAGGAATGCACTGAGTGTGCTGGAACATCCCACAGGAAACAAAAATGATGATCATGATTTGGACAACTCAAGTTGTAGCTCCGACATGGGTGAGAAGGACAATGATCTGTGTAAGTCACATCTTCATGTTGCCAAATGATGGACATGGACCGACCTCCATGTTCCCAAATCGTTTCTGTTCCCTTTTTAAAGTGGATTTTATTTAGCTTGAATTGTGTCGGAGACTTAAAGTGTCGCCGTTCATGGGCAGCTAGCAGCATTGTTTTCCACAAACTTAGCAAACAAAAAGTGAGGCAAATTAGGCCATGGGCTCCATCTTCATCGGCAAAGCCAACAGGTCGGGGCAGCTGTGGGGAAATTCAATCTATTCACATGCCGAAGCTGGTCACGGTGAGAAATTTGGAAACCATTGATTTTCTTTTTTTGTTTTCTTTTTTTGATATCCATCGAGTGCCCAAACAAATATTTGGTTGTGAAGACCGTAGGATTTTCATATAGCCCTTCAGTTCTGAAAATTGGATAGAAAATCTTAAGATTTGTACTTTTTAGGGGTAAAATTCATTTGAATTTATTTTCTACTTAGTACCCCCTTCACGATCCAACGTCCTCGCTGACACTCGTTCCTCTCTCCAATCGATGTGAGATCTCATAATCCACCCCCTTCGAAGTCCAGCATCCTCGTTGTCACACTTTCTGGCTGTAATACCATTTGTAATGGCCAAGCTCACCGCTAGCAGATATTGTCCTCTTTAGGCTTTCCCTTCCGAGCTTCCCCTCAAGGTTTTTAAAACGCATTTTCTAGGGAGAGATTCCACACCCTTGTAAAGAATATTTTGTTTTTCTTCCTAACCGAGGTAAGATCTCACAATGTTTGAGTAGAATTAACAATTAGTTGACTTACTAACTAGACTACGTTTTATAAGTTGGTACCAAGTAGAAAAAAATTGCAAACTTGATGGACCAATTAGAAACAGTTATTCAAACCTGGAGAATATGATTTTAGGCTCATGAGCTGTTTTTCTTGAATCTTGGGTAGCTAAGCATTGACAAAATTGTTTGTTTTTGGAGCATGCAGCGGGTGAAACTGGGGAAACTAGGAACAGAATCTTTGTGGAGATACATCAGGCACTTCAATCTAGTGGGTCTCACTGCAACACTTGCAATTTTATGCTTCTTTTTTTTTAATTTTTTGTTTTCTCTATATACTTAACTAAATCCATTCCAGGTGAATAGCATTTCAAATGCTTCAAGGGACCAAATCCTTCACGTTGTGCAGCGACATTTTGCATTACAGGTTCTTTCTCTTTCTCTCTCTCTCTTTGCTGTTTGCATTTGAAATTATGAACTACTTTGTTTTGAGAAACATATCTGTCTGTGTTCCTTTGTTTGATACAGACGAGCTTGAACGAGGCATCGGTGATGACTGAATTCATTCGCACTGTTAAGAGACGAAGGGAGTGAATCGAGTGACAGCAAGCGAGAGTGAATGATGATTGAAAAGTGATTTCACATAAATGTATGTTTGTATAGTGATTATGTCTGTTAAATGCTAACTATAACTTGTAGCTTCTAACTTCTAACACTCGACCTTGATTACTACCTAGACCCGTAATATATTTTTAGCTTCTTTCTCTTCGTGAAA

mRNA sequence

CACACTCTCTCTCTCTCTCTCTCTCTCTTCGCCTCTTTTCCATTTTGCACATTTCAATGCTTCCTTCCTTCCTCTTACATTACACCTCTGTTTCTTCTTTGTCCCTTTGATCACTCACTCACTCCCTTCGCTCCATTTCTTCTGAAATTCCCATCTCTTCTTCCCTTCTAAATCTTCTCTCGTTTTCCTGTTTCTCATCTTCCAATCCGCCTCCATTCTGCTTCCATTCGAGTTCGTCTACGATCTATTTGCTCCAAATTGATATTTGGCTGTTGGGCGTCAATGAAATGAGGATATGATGTCATCATGTCACTTCTACTCGAGAGAATTCAAGGAAGAGCCTATTTATGAGCACCAAGCTTATCCTGTCTTGCCGTGGTTCATTTATTATCAGCACAATGTGCCCGTGAAGTATAGATATATTTACTACGCTTCTTCCATGCTAGGGCCATTTATCATTTCCTGATCTTGTTCGTGTAAACTACAGGTTCTATTTGAGAAAAGACTTCTCAAAAACTTTCAAAGAAGGGTTCAAAGAATGCTGGAACCGGAGTTTTGTGCTTCTAGAATTCAGTCTCCTTTTCGTGAGGAGAGTTGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGGAAATAACAGAACAAAGTCTGTTTTACTGGGATTGCAAGGCGTAGTTAAGAAGGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTTTTGAAAAATGGGGTTGAAGTGAAGCTGCAAAGGAATGCACTGAGTGTGCTGGAACATCCCACAGGAAACAAAAATGATGATCATGATTTGGACAACTCAAGTTGTAGCTCCGACATGGGTGAGAAGGACAATGATCTGTCTAGCAGCATTGTTTTCCACAAACTTAGCAAACAAAAAGTGAGGCAAATTAGGCCATGGGCTCCATCTTCATCGGCAAAGCCAACAGGTCGGGGCAGCTGTGGGGAAATTCAATCTATTCACATGCCGAAGCTGGTCACGGTGAATAGCATTTCAAATGCTTCAAGGGACCAAATCCTTCACGTTGTGCAGCGACATTTTGCATTACAGACGAGCTTGAACGAGGCATCGGTGATGACTGAATTCATTCGCACTGTTAAGAGACGAAGGGAGTGAATCGAGTGACAGCAAGCGAGAGTGAATGATGATTGAAAAGTGATTTCACATAAATGTATGTTTGTATAGTGATTATGTCTGTTAAATGCTAACTATAACTTGTAGCTTCTAACTTCTAACACTCGACCTTGATTACTACCTAGACCCGTAATATATTTTTAGCTTCTTTCTCTTCGTGAAA

Coding sequence (CDS)

ATGCTGGAACCGGAGTTTTGTGCTTCTAGAATTCAGTCTCCTTTTCGTGAGGAGAGTTGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGGAAATAACAGAACAAAGTCTGTTTTACTGGGATTGCAAGGCGTAGTTAAGAAGGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTTTTGAAAAATGGGGTTGAAGTGAAGCTGCAAAGGAATGCACTGAGTGTGCTGGAACATCCCACAGGAAACAAAAATGATGATCATGATTTGGACAACTCAAGTTGTAGCTCCGACATGGGTGAGAAGGACAATGATCTGTCTAGCAGCATTGTTTTCCACAAACTTAGCAAACAAAAAGTGAGGCAAATTAGGCCATGGGCTCCATCTTCATCGGCAAAGCCAACAGGTCGGGGCAGCTGTGGGGAAATTCAATCTATTCACATGCCGAAGCTGGTCACGGTGAATAGCATTTCAAATGCTTCAAGGGACCAAATCCTTCACGTTGTGCAGCGACATTTTGCATTACAGACGAGCTTGAACGAGGCATCGGTGATGACTGAATTCATTCGCACTGTTAAGAGACGAAGGGAGTGA

Protein sequence

MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKLSKQKVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTVNSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE
Homology
[Close]
BLAST of Cp4.1LG01g06780 vs. TrEMBL
Match: A0A0A0KUM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047910 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.5e-92
Identity = 183/223 (82.06%), Postives = 190/223 (85.20%), Query Frame = 1 

Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS IQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+ND+HDLDNSSCSSD+GEKDND SSS+VFHKL
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKQKVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVT---------------------V 180
           SK KVRQI+PWAPSSSAK T RGS GEIQSIHMPK  T                     V
Sbjct: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 203
           NSISN SRDQIL VVQRHFALQTSLNEASVMTEFIR VK+RRE
Sbjct: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]
BLAST of Cp4.1LG01g06780 vs. TrEMBL
Match: F6HUL7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00080 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.6e-65
Identity = 144/220 (65.45%), Postives = 163/220 (74.09%), Query Frame = 1 

Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLEPE C++R+ SPFREES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLGG
Sbjct: 1   MLEPELCSARVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGN-KNDDHDLDNSSCSSDMGEKDNDLSSSIVFHK 120
           WHWLVLKNGVEVKLQRNALSVLE PTGN ++DDHD DNSS SSD+GEKDND SSSI FHK
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEPPTGNEEDDDHDFDNSSSSSDIGEKDNDFSSSIEFHK 120

Query: 121 LSKQKVRQIRPWAPSSSAKPTGRGSCGEIQS--------IHMPKLVT------------V 180
           LSK + R  RPWAPS+S K T R S  E+QS        +++ KL T             
Sbjct: 121 LSKPRARHTRPWAPSASVKLTNRNSHREVQSGIDAPQPIVNLAKLGTDSLWRYCKKFNIG 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKR 200
           N  SN+SR+Q+L  VQ+HF  Q  + E  V+  FIR  KR
Sbjct: 181 NLNSNSSREQMLKAVQQHFTAQ-QVEEVPVIMGFIRAAKR 219

[Close]
BLAST of Cp4.1LG01g06780 vs. TrEMBL
Match: V4SXX0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022027mg PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-63
Identity = 143/227 (63.00%), Postives = 170/227 (74.89%), Query Frame = 1 

Query: 1   MLEPEFCASR-IQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLG 60
           MLEPE C++R + SPFREES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLG
Sbjct: 1   MLEPELCSNRGVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLG 60

Query: 61  GWHWLVLKNGVEVKLQRNALSVLEHPTGNK-NDDHDLDNSSCSSDMGEKDNDLSSSIVFH 120
           GWHWLVLKNGVEVKLQRNALSVLEHPTGN+ ++DHD D+SS  SD+GEKD+D SSSI FH
Sbjct: 61  GWHWLVLKNGVEVKLQRNALSVLEHPTGNEVDEDHDFDSSS-GSDIGEKDHDFSSSIEFH 120

Query: 121 KLSKQKVRQIRPWAPSSSAKPTGRGSCGEIQSI--------HMPKLVT------------ 180
           KLSK +VRQ RPW  S+SAK   RGS  ++QSI        ++ +L T            
Sbjct: 121 KLSKPRVRQTRPWVSSASAKLVNRGSYRDVQSIIHRSQPKVNLARLGTDSLRRYCRHYNL 180

Query: 181 VNSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTV----KRRR 202
            N  S++SR+Q+L+ VQRHF  Q  L+E  V++EF+  V    KRR+
Sbjct: 181 ANISSDSSREQMLNAVQRHFTSQPKLSEVHVISEFVNAVMKATKRRK 226

[Close]
BLAST of Cp4.1LG01g06780 vs. TrEMBL
Match: A0A067G9D3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025276mg PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.5e-63
Identity = 143/227 (63.00%), Postives = 170/227 (74.89%), Query Frame = 1 

Query: 1   MLEPEFCASR-IQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLG 60
           MLEPE C++R + SPFREES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLG
Sbjct: 1   MLEPELCSNRGVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLG 60

Query: 61  GWHWLVLKNGVEVKLQRNALSVLEHPTGNK-NDDHDLDNSSCSSDMGEKDNDLSSSIVFH 120
           GWHWLVLKNGVEVKLQRNALSVLEHPTGN+ ++DHD D+SS  SD+GEKD+D SSSI FH
Sbjct: 61  GWHWLVLKNGVEVKLQRNALSVLEHPTGNEVDEDHDFDSSS-GSDIGEKDHDFSSSIEFH 120

Query: 121 KLSKQKVRQIRPWAPSSSAKPTGRGSCGEIQSI--------HMPKLVT------------ 180
           KLSK +VRQ RPW  S+SAK   RGS  ++QSI        ++ +L T            
Sbjct: 121 KLSKPRVRQTRPWVSSASAKLVNRGSYRDVQSIIHRSQPKVNLARLGTDSLRRYCRHYNL 180

Query: 181 VNSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTV----KRRR 202
            N  S++SR+Q+L+ VQRHF  Q  L+E  V++EF+  V    KRR+
Sbjct: 181 ANISSDSSREQMLNAVQRHFTSQPKLSEVHVISEFVNAVMKATKRRK 226

[Close]
BLAST of Cp4.1LG01g06780 vs. TrEMBL
Match: A0A061G4L4_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_016291 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.5e-63
Identity = 134/219 (61.19%), Postives = 159/219 (72.60%), Query Frame = 1 

Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLE E C+SR+ SPFREES DEELSVLPRHTKVIV GNNRTKSVL+GLQGVVKKAVGLGG
Sbjct: 1   MLEHELCSSRVLSPFREESGDEELSVLPRHTKVIVRGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNK-NDDHDLDNSSCSSDMGEKDNDLSSSIVFHK 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+ +DDHD DNSS  SD+GEKD+D SSSI +H+
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNEVDDDHDFDNSSSGSDIGEKDHDFSSSIEYHR 120

Query: 121 LSKQKVRQIRPWAPSSSAKPTGRGSCGEIQS-IHMPKLVTVNSISNAS------------ 180
            +K +VR  +PW PS+  K T R    +++S IH P+LV +  +   S            
Sbjct: 121 PAKPRVRHTKPWVPSAPIKSTNRSGYRDVRSIIHAPQLVNLARLDTDSLRRYCKHFKLGG 180

Query: 181 ------RDQILHVVQRHFALQTSLNEASVMTEFIRTVKR 200
                 R+Q+L+ VQ+HF  Q  LNE  V++EFI   KR
Sbjct: 181 INAYSPREQMLNTVQQHFVSQPPLNEVQVISEFISVAKR 219

[Close]
BLAST of Cp4.1LG01g06780 vs. TAIR10
Match: AT1G19330.3 (AT1G19330.3 unknown protein)

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-38
Identity = 102/218 (46.79%), Postives = 133/218 (61.01%), Query Frame = 1 

Query: 10  RIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNG 69
           +IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG
Sbjct: 17  QIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNG 76

Query: 70  VEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKLSKQKVRQIR 129
           +EVKLQRNALSVLE PTGN+ DD DLD  +   +  +      +S    K  K K+R  R
Sbjct: 77  IEVKLQRNALSVLEPPTGNEEDD-DLDFENTQRNGSDMIVSFPASEDTLKPHKSKLRGQR 136

Query: 130 PWAPSSSAKPTGRGSCGEIQS------------------IHMPKLVT-------VNSISN 189
             +  SS K   R    + QS                  + MP L+        V++I N
Sbjct: 137 --SSRSSHKTMSRSLSSDSQSKSSGFTPPENMQKVDLSKLEMPALLNYWRHFNLVDAIPN 196

Query: 190 ASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 203
            S++Q++ +VQRHF  Q  ++E  V+  F++  KR ++
Sbjct: 197 PSKEQLIDIVQRHFMSQ-QMDELQVIVGFVQAAKRMKK 230

[Close]
BLAST of Cp4.1LG01g06780 vs. TAIR10
Match: AT1G75060.1 (AT1G75060.1 unknown protein)

HSP 1 Score: 153.7 bits (387), Expect = 1.2e-37
Identity = 95/212 (44.81%), Postives = 134/212 (63.21%), Query Frame = 1 

Query: 9   SRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKN 68
           S++QS F + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL N
Sbjct: 20  SQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTN 79

Query: 69  GVEVKLQRNALSVLEHPTGNKND-DHDLDNS---SCSSDM--------------GEKDND 128
           G+EVKLQRNALSVLEHPTGN+ D D ++D+S   +  SDM              G + + 
Sbjct: 80  GIEVKLQRNALSVLEHPTGNEEDNDLEVDHSTQWNHPSDMTTEDTLKPHKSKKRGHRSSR 139

Query: 129 LSSSIVFHKLSKQKVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLV-------TVNSIS 188
           LS   ++ ++S     +I    P  + K        ++  + M  L+        V+++ 
Sbjct: 140 LSQKALYREVSCDSHSKISSITPRLNMKV-------DLTKLDMAALLRYWRHFNLVDALP 199

Query: 189 NASRDQILHVVQRHFALQTSLNEASVMTEFIR 196
           N +++Q++ ++QRHF  Q  ++E  V+  F++
Sbjct: 200 NPTKEQLIDIIQRHFMSQ-QMDELQVIVGFVQ 223

[Close]
BLAST of Cp4.1LG01g06780 vs. NCBI nr
Match: gi|449457566|ref|XP_004146519.1| (PREDICTED: uncharacterized protein LOC101209634 [Cucumis sativus])

HSP 1 Score: 347.1 bits (889), Expect = 2.1e-92
Identity = 183/223 (82.06%), Postives = 190/223 (85.20%), Query Frame = 1 

Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS IQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+ND+HDLDNSSCSSD+GEKDND SSS+VFHKL
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKQKVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVT---------------------V 180
           SK KVRQI+PWAPSSSAK T RGS GEIQSIHMPK  T                     V
Sbjct: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 203
           NSISN SRDQIL VVQRHFALQTSLNEASVMTEFIR VK+RRE
Sbjct: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]
BLAST of Cp4.1LG01g06780 vs. NCBI nr
Match: gi|659102276|ref|XP_008452044.1| (PREDICTED: uncharacterized protein LOC103493170 [Cucumis melo])

HSP 1 Score: 345.5 bits (885), Expect = 6.2e-92
Identity = 183/223 (82.06%), Postives = 190/223 (85.20%), Query Frame = 1 

Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS IQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 12  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 71

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKL 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+ND+ DLDNSSCSSD+GEKDND SSS+VFHKL
Sbjct: 72  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDNDFSSSVVFHKL 131

Query: 121 SKQKVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVT---------------------V 180
           SK KVRQI+ WAPSSSAK TGRGS GEIQSIHMPK  T                     V
Sbjct: 132 SKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSGTRVKLGKLGTESLWRYIKHFNLV 191

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 203
           NSISN SRDQILHVVQRHFALQTSLNEASVMTEFIR VK+RRE
Sbjct: 192 NSISNTSRDQILHVVQRHFALQTSLNEASVMTEFIRAVKKRRE 234

[Close]
BLAST of Cp4.1LG01g06780 vs. NCBI nr
Match: gi|297742214|emb|CBI34363.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 257.3 bits (656), Expect = 2.2e-65
Identity = 144/220 (65.45%), Postives = 163/220 (74.09%), Query Frame = 1 

Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLEPE C++R+ SPFREES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLGG
Sbjct: 1   MLEPELCSARVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGN-KNDDHDLDNSSCSSDMGEKDNDLSSSIVFHK 120
           WHWLVLKNGVEVKLQRNALSVLE PTGN ++DDHD DNSS SSD+GEKDND SSSI FHK
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEPPTGNEEDDDHDFDNSSSSSDIGEKDNDFSSSIEFHK 120

Query: 121 LSKQKVRQIRPWAPSSSAKPTGRGSCGEIQS--------IHMPKLVT------------V 180
           LSK + R  RPWAPS+S K T R S  E+QS        +++ KL T             
Sbjct: 121 LSKPRARHTRPWAPSASVKLTNRNSHREVQSGIDAPQPIVNLAKLGTDSLWRYCKKFNIG 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKR 200
           N  SN+SR+Q+L  VQ+HF  Q  + E  V+  FIR  KR
Sbjct: 181 NLNSNSSREQMLKAVQQHFTAQ-QVEEVPVIMGFIRAAKR 219

[Close]
BLAST of Cp4.1LG01g06780 vs. NCBI nr
Match: gi|359474294|ref|XP_002279852.2| (PREDICTED: uncharacterized protein LOC100258615 isoform X1 [Vitis vinifera])

HSP 1 Score: 257.3 bits (656), Expect = 2.2e-65
Identity = 144/220 (65.45%), Postives = 163/220 (74.09%), Query Frame = 1 

Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLEPE C++R+ SPFREES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLGG
Sbjct: 1   MLEPELCSARVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGN-KNDDHDLDNSSCSSDMGEKDNDLSSSIVFHK 120
           WHWLVLKNGVEVKLQRNALSVLE PTGN ++DDHD DNSS SSD+GEKDND SSSI FHK
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEPPTGNEEDDDHDFDNSSSSSDIGEKDNDFSSSIEFHK 120

Query: 121 LSKQKVRQIRPWAPSSSAKPTGRGSCGEIQS--------IHMPKLVT------------V 180
           LSK + R  RPWAPS+S K T R S  E+QS        +++ KL T             
Sbjct: 121 LSKPRARHTRPWAPSASVKLTNRNSHREVQSGIDAPQPIVNLAKLGTDSLWRYCKKFNIG 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKR 200
           N  SN+SR+Q+L  VQ+HF  Q  + E  V+  FIR  KR
Sbjct: 181 NLNSNSSREQMLKAVQQHFTAQ-QVEEVPVIMGFIRAAKR 219

[Close]
BLAST of Cp4.1LG01g06780 vs. NCBI nr
Match: gi|1009156141|ref|XP_015896088.1| (PREDICTED: uncharacterized protein LOC107429848 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-64
Identity = 140/223 (62.78%), Postives = 168/223 (75.34%), Query Frame = 1 

Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLE E C+SR+ SP REES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLGG
Sbjct: 1   MLEAELCSSRVLSPLREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNK-NDDHDLDNSSCSSDMGEKDNDLSSSIVFHK 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+ +DDHD DNSS SSD+ +KDND SSS  FHK
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNEIDDDHDYDNSSTSSDIVDKDNDFSSSTEFHK 120

Query: 121 LSKQKVRQIRPWAPSSSAKPTGRGSCGEIQSIH-------MPKL------------VTVN 180
           LSK ++R  + W P +S KP  R +  E+QSIH       M KL              ++
Sbjct: 121 LSKPRIRHAKRWIPPTSLKPINRSTYKEVQSIHTSQSSINMAKLGMDALRRYCKHFNLLS 180

Query: 181 SISNASRDQILHVVQRHF-ALQTSLNEASVMTEFIRTVKRRRE 203
           S S+ +R+ ++++VQRHF + Q  L+EASV+TEF+ + KRR+E
Sbjct: 181 SNSDPTREHMVNIVQRHFTSHQKPLDEASVITEFVHSAKRRKE 223

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g06780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g06780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUM7_CUCSA1.5e-9282.06Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047910 PE=4 SV=1[more]
F6HUL7_VITVI1.6e-6565.45Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00080 PE=4 SV=... [more]
V4SXX0_9ROSI1.5e-6363.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022027mg PE=4 SV=1[more]
A0A067G9D3_CITSI1.5e-6363.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025276mg PE=4 SV=1[more]
A0A061G4L4_THECC2.5e-6361.19Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_016291 PE=4 SV=1[more]
BLAST of Cp4.1LG01g06780 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19330.31.9e-3846.79 unknown protein[more]
AT1G75060.11.2e-3744.81 unknown protein[more]
BLAST of Cp4.1LG01g06780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457566|ref|XP_004146519.1|2.1e-9282.06PREDICTED: uncharacterized protein LOC101209634 [Cucumis sativus][more]
gi|659102276|ref|XP_008452044.1|6.2e-9282.06PREDICTED: uncharacterized protein LOC103493170 [Cucumis melo][more]
gi|297742214|emb|CBI34363.3|2.2e-6565.45unnamed protein product [Vitis vinifera][more]
gi|359474294|ref|XP_002279852.2|2.2e-6565.45PREDICTED: uncharacterized protein LOC100258615 isoform X1 [Vitis vinifera][more]
gi|1009156141|ref|XP_015896088.1|1.4e-6462.78PREDICTED: uncharacterized protein LOC107429848 isoform X1 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR025718SAP30_Sin3-bd
IPR024145His_deAcase_SAP30/SAP30L
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g06780.1Cp4.1LG01g06780.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024145Histone deacetylase complex subunit SAP30/SAP30-likePANTHERPTHR13286SAP30coord: 8..202
score: 2.0
IPR025718Histone deacetylase complex subunit SAP30, Sin3 binding domainPFAMPF13867SAP30_Sin3_bdgcoord: 161..198
score: 2.
NoneNo IPR availablePANTHERPTHR13286:SF8SUBFAMILY NOT NAMEDcoord: 8..202
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g06780Cucsa.106720Cucumber (Gy14) v1cgycpeB0238
Cp4.1LG01g06780CmaCh04G007420Cucurbita maxima (Rimu)cmacpeB731
Cp4.1LG01g06780CmoCh04G007910Cucurbita moschata (Rifu)cmocpeB684
Cp4.1LG01g06780Cla014613Watermelon (97103) v1cpewmB420
Cp4.1LG01g06780Csa4G047910Cucumber (Chinese Long) v2cpecuB400
Cp4.1LG01g06780MELO3C016365Melon (DHL92) v3.5.1cpemeB424
Cp4.1LG01g06780ClCG07G008240Watermelon (Charleston Gray)cpewcgB412
Cp4.1LG01g06780CSPI04G05700Wild cucumber (PI 183967)cpecpiB397
Cp4.1LG01g06780Lsi07G002730Bottle gourd (USVL1VR-Ls)cpelsiB373
Cp4.1LG01g06780MELO3C016365.2Melon (DHL92) v3.6.1cpemedB496
Cp4.1LG01g06780CsaV3_4G005860Cucumber (Chinese Long) v3cpecucB0497
Cp4.1LG01g06780Bhi01G001856Wax gourdcpewgoB0510
Cp4.1LG01g06780CsGy4G005570Cucumber (Gy14) v2cgybcpeB502
Cp4.1LG01g06780Carg14139Silver-seed gourdcarcpeB1303
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g06780Silver-seed gourdcarcpeB1302
Cp4.1LG01g06780Silver-seed gourdcarcpeB1417
Cp4.1LG01g06780Silver-seed gourdcarcpeB1418
Cp4.1LG01g06780Cucumber (Chinese Long) v3cpecucB0580
Cp4.1LG01g06780Wax gourdcpewgoB0511
Cp4.1LG01g06780Cucurbita pepo (Zucchini)cpecpeB073
Cp4.1LG01g06780Cucurbita pepo (Zucchini)cpecpeB233
Cp4.1LG01g06780Cucurbita pepo (Zucchini)cpecpeB237
Cp4.1LG01g06780Cucurbita pepo (Zucchini)cpecpeB385
Cp4.1LG01g06780Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g06780Cucurbita maxima (Rimu)cmacpeB354
Cp4.1LG01g06780Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g06780Cucurbita maxima (Rimu)cmacpeB876
Cp4.1LG01g06780Cucurbita moschata (Rifu)cmocpeB312
Cp4.1LG01g06780Cucurbita moschata (Rifu)cmocpeB316
Cp4.1LG01g06780Cucurbita moschata (Rifu)cmocpeB613
Cp4.1LG01g06780Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g06780Cucurbita moschata (Rifu)cmocpeB813
Cp4.1LG01g06780Wild cucumber (PI 183967)cpecpiB468
Cp4.1LG01g06780Watermelon (Charleston Gray)cpewcgB374
Cp4.1LG01g06780Watermelon (97103) v1cpewmB443
Cp4.1LG01g06780Melon (DHL92) v3.5.1cpemeB434
Cp4.1LG01g06780Cucumber (Gy14) v2cgybcpeB807
Cp4.1LG01g06780Melon (DHL92) v3.6.1cpemedB510