CmoCh04G007910 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G007910
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Histone deacetylase complex subunit SAP30
Location	Cmo_Chr04 : 3953402 .. 3955854 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGAACCGGAGTTTTGTGCTTCTAGAATTCAGTCTCCTTTTCGTGAGGAGAGTTGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGGAAATAACAGAACAAAGTCTGTTTTACTGGGATTGCAAGGCGTAGTTAAGAAGGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTATTCTCTTTTTCATCCTGTCTTTTCCCTTTGTTCCTCGTCTCTTATTTACCCTCTGTATTATGCATTTTTCTATCTGCCCATTTCCTTGTCGTGAAAGTTACACCAAAAGTCACAACAATAACCAACTATGATTGGAGAAATGCTATTATTTTGTTTTAGCTCCTACGTTTCTAAGCTAGAAGCCTGTAATCAGAAGGAATTTATGACTCCACTTGATAAGTTTTCTGTTCTTAAAAATTGTGCTTGCTTCTAATCTCCTTTAATAACACATTTGAGTTCTTATAAAGTTCCAAAAACAGAAACTATTGTTTCCATTTTCAAATTTTAGCTTAGATTTCTTATAGTATATAAGACGATTATTTTCGGCTGTTTCAATTTATCTCTGTGAATTTTGATTAAAGGCTTTGGAGATGATTAGCTGTATGGTTGGAATGTTCCGACAAGGCTCCGCTTAACGGTCTCTTGCATGGCTCATTTCCCGTGCAAAAGAACGAAACTAGTTACCCTACCTCTGTTTGATTATTTAATGAATTCACTTCATTCGTTACCTCATGATCCTTAGTAGTATGCTAAATTAGATTTTGACTATAAAGGAGTTTGATTTTTGCTGTGATGGACTCTTTCCATGTAAGGTTTTGAAAAATGGGGTTGAAGTGAAGCTGCAAAGGAATGCACTGAGTGTGCTGGAACATCCCACAGGAAACAAAAATGATGATCATGATTTGGACAACTCAAGTTGTAGCTCCGACATGGGTGAGAAGGACAATGATCTGTGTAAGTCACATCTTCATGTTGCCAAATGATGGACATGGACCGACCTCCATGTTCCCAAATCGTTTCTGTTCCCTTTTTAAAGTGGATTTTATTTAGCCTGAATTGTGTGGGAGACTTAAAGTATTACCGTTCATGGGCAGCTAGCAGCATTGTTTTCCACAAGATAAGCAAACAAAGAGTGAGACAAATTAGGCCATGGGCTCCATCTTCATCGGCAAAGCCAACAGGTCGGGGCAGCTGTGGGGAAATTCAATCTATTCACATGCCGAAACTGGTCACGGTGAGAAATTTGGAAACCATTGATTTTCTTTTTTTGATATCCATCGAGTGCCCAAACAAATATTTGGTTGTCAAGACCGTAGGATTTTCATATAGCCCTTCAGTTCTGAAAATTGGAGCAAATTGGATAGAAAATCTTGAGATTTGTACTTTTTAGGGGTAAAATTCATTTGAATTTATTTTCTATTAAAGTAACTAGTTTAGTATCCCCTCCCACTCGTTCCTCTCTCCAATTGACGTGAGATCTCATAATCCACCCCCTTCGAAGTCCAGCATCTAATACCATTTGTAATGGCCAAGCCCACCACTAGCAAATATTGTCCTCTTTAGACTTTCCCTTCCGAGCTTCCCCTCAAGGTTTTTAAAACGTGTTTTTTAGGGAGAGATTCCACATCCTTGTAAAGAATATTTTGTTCTTCTTCCTAACCAATGTGAGATCTAAGAGTCTTTGAATAGAATTAACAATTACTAACTAGCCTACTTTTTTATATGTTGCTACCAAGTAGAAACAAATTGCAAACTTGATGGACCAATTAGAAACAATTATTCAAACCTCGAGATTATGATTTTAGGCTCATGAGCTGTTTTTCTTGAATCTTGGGTAGCTAAGCATTGACAAAATTGTTTGTTTTTGGAGCATGCAGCGGGTGAAACTGGGGAAACTAGGAACAGAATCTTTGTGGAGATACATCAGGCACTTCAATCTAGTGGGTCTCACTGCAACACTTGCAATTTTATGCTTCTTCTTTTTTAAAATTTTTTTTCTCTATATACTTAACTAAATCCATTCCAGGTGAATAGCATTTCAAATGCTTCAAGGGACCAAATCCTTCACGTTGTGCAACGACATTTTGCATTACAGGTTCTTTCTCTTTCTCTTTCTCTCTCTTTGCTGTTTGCATTTGAAATTATGAACTACTTTGTTTTGAGAAACATATCTGTCTGTGTTCGTTTATTTGATACAGACGAGCTTGAACGAGGCATCAGTGATGACTGAATTCATTCGCACTGTTAAGAGACGAAGGGAGTGAATCGAGTGACAGCGAGCGAGCGTGAATGATGATTGAAAAGTGATTTCACACAAATGTATGTTTGTATAGTGATTATGTCTGTTAAATGCTAACTATAACTTCGTAGCTTCTAACTTCTAACACTCGACCTTGATTACTACCTAGACCCGTAATATATTTTTAGCTTCTTTCTCT

mRNA sequence

ATGCTGGAACCGGAGTTTTGTGCTTCTAGAATTCAGTCTCCTTTTCGTGAGGAGAGTTGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGGAAATAACAGAACAAAGTCTGTTTTACTGGGATTGCAAGGCGTAGTTAAGAAGGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTTTTGAAAAATGGGGTTGAAGTGAAGCTGCAAAGGAATGCACTGAGTGTGCTGGAACATCCCACAGGAAACAAAAATGATGATCATGATTTGGACAACTCAAGTTGTAGCTCCGACATGGGTGAGAAGGACAATGATCTGTCTAGCAGCATTGTTTTCCACAAGATAAGCAAACAAAGAGTGAGACAAATTAGGCCATGGGCTCCATCTTCATCGGCAAAGCCAACAGGTCGGGGCAGCTGTGGGGAAATTCAATCTATTCACATGCCGAAACTGGTCACGCGGGTGAAACTGGGGAAACTAGGAACAGAATCTTTGTGGAGATACATCAGGCACTTCAATCTAGTGAATAGCATTTCAAATGCTTCAAGGGACCAAATCCTTCACGTTGTGCAACGACATTTTGCATTACAGACGAGCTTGAACGAGGCATCAGTGATGACTGAATTCATTCGCACTGTTAAGAGACGAAGGGAGTGAATCGAGTGACAGCGAGCGAGCGTGAATGATGATTGAAAAGTGATTTCACACAAATGTATGTTTGTATAGTGATTATGTCTGTTAAATGCTAACTATAACTTCGTAGCTTCTAACTTCTAACACTCGACCTTGATTACTACCTAGACCCGTAATATATTTTTAGCTTCTTTCTCT

Coding sequence (CDS)

ATGCTGGAACCGGAGTTTTGTGCTTCTAGAATTCAGTCTCCTTTTCGTGAGGAGAGTTGGGATGAAGAGCTTTCAGTTCTTCCAAGGCACACTAAAGTTATTGTCACTGGAAATAACAGAACAAAGTCTGTTTTACTGGGATTGCAAGGCGTAGTTAAGAAGGCTGTTGGCCTTGGAGGCTGGCATTGGCTGGTTTTGAAAAATGGGGTTGAAGTGAAGCTGCAAAGGAATGCACTGAGTGTGCTGGAACATCCCACAGGAAACAAAAATGATGATCATGATTTGGACAACTCAAGTTGTAGCTCCGACATGGGTGAGAAGGACAATGATCTGTCTAGCAGCATTGTTTTCCACAAGATAAGCAAACAAAGAGTGAGACAAATTAGGCCATGGGCTCCATCTTCATCGGCAAAGCCAACAGGTCGGGGCAGCTGTGGGGAAATTCAATCTATTCACATGCCGAAACTGGTCACGCGGGTGAAACTGGGGAAACTAGGAACAGAATCTTTGTGGAGATACATCAGGCACTTCAATCTAGTGAATAGCATTTCAAATGCTTCAAGGGACCAAATCCTTCACGTTGTGCAACGACATTTTGCATTACAGACGAGCTTGAACGAGGCATCAGTGATGACTGAATTCATTCGCACTGTTAAGAGACGAAGGGAGTGA

Homology

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BLAST of CmoCh04G007910 vs. TrEMBL
Match: A0A0A0KUM7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047910 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 1.3e-108
Identity = 200/223 (89.69%), Postives = 211/223 (94.62%), Query Frame = 1


Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS IQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKI 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+ND+HDLDNSSCSSD+GEKDND SSS+VFHK+
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLV 180
           SK +VRQI+PWAPSSSAK T RGS GEIQSIHMPK  TRV+LGKLGTESLWRYI+HFNLV
Sbjct: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 224
           NSISN SRDQIL VVQRHFALQTSLNEASVMTEFIR VK+RRE
Sbjct: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

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BLAST of CmoCh04G007910 vs. TrEMBL
Match: F6HUL7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00080 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.7e-76
Identity = 156/222 (70.27%), Postives = 177/222 (79.73%), Query Frame = 1


Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLEPE C++R+ SPFREES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLGG
Sbjct: 1   MLEPELCSARVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGN-KNDDHDLDNSSCSSDMGEKDNDLSSSIVFHK 120
           WHWLVLKNGVEVKLQRNALSVLE PTGN ++DDHD DNSS SSD+GEKDND SSSI FHK
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEPPTGNEEDDDHDFDNSSSSSDIGEKDNDFSSSIEFHK 120

Query: 121 ISKQRVRQIRPWAPSSSAKPTGRGSCGEIQS-IHMPKLVTRVKLGKLGTESLWRYIRHFN 180
           +SK R R  RPWAPS+S K T R S  E+QS I  P+ +  V L KLGT+SLWRY + FN
Sbjct: 121 LSKPRARHTRPWAPSASVKLTNRNSHREVQSGIDAPQPI--VNLAKLGTDSLWRYCKKFN 180

Query: 181 LVNSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKR 221
           + N  SN+SR+Q+L  VQ+HF  Q  + E  V+  FIR  KR
Sbjct: 181 IGNLNSNSSREQMLKAVQQHFTAQ-QVEEVPVIMGFIRAAKR 219

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BLAST of CmoCh04G007910 vs. TrEMBL
Match: V4SXX0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022027mg PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.5e-74
Identity = 154/228 (67.54%), Postives = 184/228 (80.70%), Query Frame = 1


Query: 1   MLEPEFCASR-IQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLG 60
           MLEPE C++R + SPFREES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLG
Sbjct: 1   MLEPELCSNRGVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLG 60

Query: 61  GWHWLVLKNGVEVKLQRNALSVLEHPTGNK-NDDHDLDNSSCSSDMGEKDNDLSSSIVFH 120
           GWHWLVLKNGVEVKLQRNALSVLEHPTGN+ ++DHD D+SS  SD+GEKD+D SSSI FH
Sbjct: 61  GWHWLVLKNGVEVKLQRNALSVLEHPTGNEVDEDHDFDSSS-GSDIGEKDHDFSSSIEFH 120

Query: 121 KISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFN 180
           K+SK RVRQ RPW  S+SAK   RGS  ++QSI + +   +V L +LGT+SL RY RH+N
Sbjct: 121 KLSKPRVRQTRPWVSSASAKLVNRGSYRDVQSI-IHRSQPKVNLARLGTDSLRRYCRHYN 180

Query: 181 LVNSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTV----KRRR 223
           L N  S++SR+Q+L+ VQRHF  Q  L+E  V++EF+  V    KRR+
Sbjct: 181 LANISSDSSREQMLNAVQRHFTSQPKLSEVHVISEFVNAVMKATKRRK 226

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BLAST of CmoCh04G007910 vs. TrEMBL
Match: A0A067G9D3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025276mg PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.5e-74
Identity = 154/228 (67.54%), Postives = 184/228 (80.70%), Query Frame = 1


Query: 1   MLEPEFCASR-IQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLG 60
           MLEPE C++R + SPFREES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLG
Sbjct: 1   MLEPELCSNRGVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLG 60

Query: 61  GWHWLVLKNGVEVKLQRNALSVLEHPTGNK-NDDHDLDNSSCSSDMGEKDNDLSSSIVFH 120
           GWHWLVLKNGVEVKLQRNALSVLEHPTGN+ ++DHD D+SS  SD+GEKD+D SSSI FH
Sbjct: 61  GWHWLVLKNGVEVKLQRNALSVLEHPTGNEVDEDHDFDSSS-GSDIGEKDHDFSSSIEFH 120

Query: 121 KISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFN 180
           K+SK RVRQ RPW  S+SAK   RGS  ++QSI + +   +V L +LGT+SL RY RH+N
Sbjct: 121 KLSKPRVRQTRPWVSSASAKLVNRGSYRDVQSI-IHRSQPKVNLARLGTDSLRRYCRHYN 180

Query: 181 LVNSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTV----KRRR 223
           L N  S++SR+Q+L+ VQRHF  Q  L+E  V++EF+  V    KRR+
Sbjct: 181 LANISSDSSREQMLNAVQRHFTSQPKLSEVHVISEFVNAVMKATKRRK 226

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BLAST of CmoCh04G007910 vs. TrEMBL
Match: M5W9J4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023648mg PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.3e-73
Identity = 151/223 (67.71%), Postives = 176/223 (78.92%), Query Frame = 1


Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLEPE C+SR+ SPFREES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLGG
Sbjct: 1   MLEPELCSSRMLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKI 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+ +D D D SS SSD G+K+ND S  + FHK 
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNE-EDSDHDYSSSSSDHGDKENDFSRCLEFHKS 120

Query: 121 SKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLV 180
           SK RVR  RP+ PS+  K   RGS  E+QSIH P+   RV L KLGT +L RY RHFNL+
Sbjct: 121 SKPRVRYPRPYVPSTLTKSINRGSYREVQSIHRPQ--PRVNLAKLGTSTLRRYCRHFNLL 180

Query: 181 NSISNASRDQILHVVQRHF-ALQTSLNEASVMTEFIRTVKRRR 223
            S SN +R+Q+++V QRHF + Q  L+E SV+TEF+   + R+
Sbjct: 181 TSNSNPTREQLINVAQRHFISQQMPLDEVSVVTEFVDATRSRK 220

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BLAST of CmoCh04G007910 vs. TAIR10
Match: AT1G75060.1 (AT1G75060.1 unknown protein)

HSP 1 Score: 184.5 bits (467), Expect = 7.2e-47
Identity = 106/208 (50.96%), Postives = 144/208 (69.23%), Query Frame = 1


Query: 9   SRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKN 68
           S++QS F + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL N
Sbjct: 20  SQLQSCFGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTN 79

Query: 69  GVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKISKQRVRQI 128
           G+EVKLQRNALSVLEHPTGN+ +D+DL+    +      D     ++  HK SK+R  + 
Sbjct: 80  GIEVKLQRNALSVLEHPTGNE-EDNDLEVDHSTQWNHPSDMTTEDTLKPHK-SKKRGHRS 139

Query: 129 RPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISNASR 188
              +  +  +     S  +I SI  P+L  +V L KL   +L RY RHFNLV+++ N ++
Sbjct: 140 SRLSQKALYREVSCDSHSKISSI-TPRLNMKVDLTKLDMAALLRYWRHFNLVDALPNPTK 199

Query: 189 DQILHVVQRHFALQTSLNEASVMTEFIR 217
           +Q++ ++QRHF  Q  ++E  V+  F++
Sbjct: 200 EQLIDIIQRHFMSQ-QMDELQVIVGFVQ 223

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BLAST of CmoCh04G007910 vs. TAIR10
Match: AT1G19330.3 (AT1G19330.3 unknown protein)

HSP 1 Score: 181.8 bits (460), Expect = 4.6e-46
Identity = 110/218 (50.46%), Postives = 144/218 (66.06%), Query Frame = 1


Query: 10  RIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGGWHWLVLKNG 69
           +IQS + + S +EELSVLPRHTKV+VTGNNRTKSVL+GLQGVVKKAVGLGGWHWLVL NG
Sbjct: 17  QIQSFYGDCSSEEELSVLPRHTKVVVTGNNRTKSVLVGLQGVVKKAVGLGGWHWLVLTNG 76

Query: 70  VEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKISKQRVRQIR 129
           +EVKLQRNALSVLE PTGN+ DD DLD  +   +  +      +S    K  K ++R  R
Sbjct: 77  IEVKLQRNALSVLEPPTGNEEDD-DLDFENTQRNGSDMIVSFPASEDTLKPHKSKLRGQR 136

Query: 130 PWAPSSSAKPTGRGSCGEIQS----IHMPKLVTRVKLGKLGTESLWRYIRHFNLVNSISN 189
             +  SS K   R    + QS       P+ + +V L KL   +L  Y RHFNLV++I N
Sbjct: 137 --SSRSSHKTMSRSLSSDSQSKSSGFTPPENMQKVDLSKLEMPALLNYWRHFNLVDAIPN 196

Query: 190 ASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 224
            S++Q++ +VQRHF  Q  ++E  V+  F++  KR ++
Sbjct: 197 PSKEQLIDIVQRHFMSQ-QMDELQVIVGFVQAAKRMKK 230

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BLAST of CmoCh04G007910 vs. NCBI nr
Match: gi|449457566|ref|XP_004146519.1| (PREDICTED: uncharacterized protein LOC101209634 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 1.8e-108
Identity = 200/223 (89.69%), Postives = 211/223 (94.62%), Query Frame = 1


Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS IQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 1   MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKI 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+ND+HDLDNSSCSSD+GEKDND SSS+VFHK+
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEHDLDNSSCSSDIGEKDNDFSSSVVFHKL 120

Query: 121 SKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLV 180
           SK +VRQI+PWAPSSSAK T RGS GEIQSIHMPK  TRV+LGKLGTESLWRYI+HFNLV
Sbjct: 121 SKPKVRQIKPWAPSSSAKSTSRGSYGEIQSIHMPKSGTRVRLGKLGTESLWRYIKHFNLV 180

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 224
           NSISN SRDQIL VVQRHFALQTSLNEASVMTEFIR VK+RRE
Sbjct: 181 NSISNTSRDQILQVVQRHFALQTSLNEASVMTEFIRAVKKRRE 223

[Close]

BLAST of CmoCh04G007910 vs. NCBI nr
Match: gi|659102276|ref|XP_008452044.1| (PREDICTED: uncharacterized protein LOC103493170 [Cucumis melo])

HSP 1 Score: 400.2 bits (1027), Expect = 2.4e-108
Identity = 201/223 (90.13%), Postives = 211/223 (94.62%), Query Frame = 1


Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           M+EPEFCAS IQSPFREES DEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG
Sbjct: 12  MVEPEFCASNIQSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 71

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNKNDDHDLDNSSCSSDMGEKDNDLSSSIVFHKI 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+ND+ DLDNSSCSSD+GEKDND SSS+VFHK+
Sbjct: 72  WHWLVLKNGVEVKLQRNALSVLEHPTGNENDEPDLDNSSCSSDIGEKDNDFSSSVVFHKL 131

Query: 121 SKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNLV 180
           SK +VRQI+ WAPSSSAK TGRGS GEIQSIHMPK  TRVKLGKLGTESLWRYI+HFNLV
Sbjct: 132 SKPKVRQIKQWAPSSSAKSTGRGSYGEIQSIHMPKSGTRVKLGKLGTESLWRYIKHFNLV 191

Query: 181 NSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKRRRE 224
           NSISN SRDQILHVVQRHFALQTSLNEASVMTEFIR VK+RRE
Sbjct: 192 NSISNTSRDQILHVVQRHFALQTSLNEASVMTEFIRAVKKRRE 234

[Close]

BLAST of CmoCh04G007910 vs. NCBI nr
Match: gi|297742214|emb|CBI34363.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 292.7 bits (748), Expect = 5.3e-76
Identity = 156/222 (70.27%), Postives = 177/222 (79.73%), Query Frame = 1


Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLEPE C++R+ SPFREES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLGG
Sbjct: 1   MLEPELCSARVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGN-KNDDHDLDNSSCSSDMGEKDNDLSSSIVFHK 120
           WHWLVLKNGVEVKLQRNALSVLE PTGN ++DDHD DNSS SSD+GEKDND SSSI FHK
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEPPTGNEEDDDHDFDNSSSSSDIGEKDNDFSSSIEFHK 120

Query: 121 ISKQRVRQIRPWAPSSSAKPTGRGSCGEIQS-IHMPKLVTRVKLGKLGTESLWRYIRHFN 180
           +SK R R  RPWAPS+S K T R S  E+QS I  P+ +  V L KLGT+SLWRY + FN
Sbjct: 121 LSKPRARHTRPWAPSASVKLTNRNSHREVQSGIDAPQPI--VNLAKLGTDSLWRYCKKFN 180

Query: 181 LVNSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKR 221
           + N  SN+SR+Q+L  VQ+HF  Q  + E  V+  FIR  KR
Sbjct: 181 IGNLNSNSSREQMLKAVQQHFTAQ-QVEEVPVIMGFIRAAKR 219

[Close]

BLAST of CmoCh04G007910 vs. NCBI nr
Match: gi|359474294|ref|XP_002279852.2| (PREDICTED: uncharacterized protein LOC100258615 isoform X1 [Vitis vinifera])

HSP 1 Score: 292.7 bits (748), Expect = 5.3e-76
Identity = 156/222 (70.27%), Postives = 177/222 (79.73%), Query Frame = 1


Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLEPE C++R+ SPFREES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLGG
Sbjct: 1   MLEPELCSARVLSPFREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGN-KNDDHDLDNSSCSSDMGEKDNDLSSSIVFHK 120
           WHWLVLKNGVEVKLQRNALSVLE PTGN ++DDHD DNSS SSD+GEKDND SSSI FHK
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEPPTGNEEDDDHDFDNSSSSSDIGEKDNDFSSSIEFHK 120

Query: 121 ISKQRVRQIRPWAPSSSAKPTGRGSCGEIQS-IHMPKLVTRVKLGKLGTESLWRYIRHFN 180
           +SK R R  RPWAPS+S K T R S  E+QS I  P+ +  V L KLGT+SLWRY + FN
Sbjct: 121 LSKPRARHTRPWAPSASVKLTNRNSHREVQSGIDAPQPI--VNLAKLGTDSLWRYCKKFN 180

Query: 181 LVNSISNASRDQILHVVQRHFALQTSLNEASVMTEFIRTVKR 221
           + N  SN+SR+Q+L  VQ+HF  Q  + E  V+  FIR  KR
Sbjct: 181 IGNLNSNSSREQMLKAVQQHFTAQ-QVEEVPVIMGFIRAAKR 219

[Close]

BLAST of CmoCh04G007910 vs. NCBI nr
Match: gi|1009156141|ref|XP_015896088.1| (PREDICTED: uncharacterized protein LOC107429848 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 286.6 bits (732), Expect = 3.8e-74
Identity = 147/225 (65.33%), Postives = 182/225 (80.89%), Query Frame = 1


Query: 1   MLEPEFCASRIQSPFREESWDEELSVLPRHTKVIVTGNNRTKSVLLGLQGVVKKAVGLGG 60
           MLE E C+SR+ SP REES DEELSVLPRHTKVIVTGNNRTKSVL+GLQGVVKKAVGLGG
Sbjct: 1   MLEAELCSSRVLSPLREESGDEELSVLPRHTKVIVTGNNRTKSVLVGLQGVVKKAVGLGG 60

Query: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNK-NDDHDLDNSSCSSDMGEKDNDLSSSIVFHK 120
           WHWLVLKNGVEVKLQRNALSVLEHPTGN+ +DDHD DNSS SSD+ +KDND SSS  FHK
Sbjct: 61  WHWLVLKNGVEVKLQRNALSVLEHPTGNEIDDDHDYDNSSTSSDIVDKDNDFSSSTEFHK 120

Query: 121 ISKQRVRQIRPWAPSSSAKPTGRGSCGEIQSIHMPKLVTRVKLGKLGTESLWRYIRHFNL 180
           +SK R+R  + W P +S KP  R +  E+QSIH  +  + + + KLG ++L RY +HFNL
Sbjct: 121 LSKPRIRHAKRWIPPTSLKPINRSTYKEVQSIHTSQ--SSINMAKLGMDALRRYCKHFNL 180

Query: 181 VNSISNASRDQILHVVQRHF-ALQTSLNEASVMTEFIRTVKRRRE 224
           ++S S+ +R+ ++++VQRHF + Q  L+EASV+TEF+ + KRR+E
Sbjct: 181 LSSNSDPTREHMVNIVQRHFTSHQKPLDEASVITEFVHSAKRRKE 223

The following BLAST results are available for this feature:

BLAST of CmoCh04G007910 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G007910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUM7_CUCSA	1.3e-108	89.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G047910 PE=4 SV=1	[more]
F6HUL7_VITVI	3.7e-76	70.27	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00080 PE=4 SV=...	[more]
V4SXX0_9ROSI	3.5e-74	67.54	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022027mg PE=4 SV=1	[more]
A0A067G9D3_CITSI	3.5e-74	67.54	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025276mg PE=4 SV=1	[more]
M5W9J4_PRUPE	1.3e-73	67.71	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023648mg PE=4 SV=1	[more]

BLAST of CmoCh04G007910 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G75060.1	7.2e-47	50.96	unknown protein	[more]
AT1G19330.3	4.6e-46	50.46	unknown protein	[more]

BLAST of CmoCh04G007910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457566\|ref\|XP_004146519.1\|	1.8e-108	89.69	PREDICTED: uncharacterized protein LOC101209634 [Cucumis sativus]	[more]
gi\|659102276\|ref\|XP_008452044.1\|	2.4e-108	90.13	PREDICTED: uncharacterized protein LOC103493170 [Cucumis melo]	[more]
gi\|297742214\|emb\|CBI34363.3\|	5.3e-76	70.27	unnamed protein product [Vitis vinifera]	[more]
gi\|359474294\|ref\|XP_002279852.2\|	5.3e-76	70.27	PREDICTED: uncharacterized protein LOC100258615 isoform X1 [Vitis vinifera]	[more]
gi\|1009156141\|ref\|XP_015896088.1\|	3.8e-74	65.33	PREDICTED: uncharacterized protein LOC107429848 isoform X1 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR024145	His_deAcase_SAP30/SAP30L
IPR025718	SAP30_Sin3-bd

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G007910.1	CmoCh04G007910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024145	Histone deacetylase complex subunit SAP30/SAP30-like	PANTHER	PTHR13286	SAP30	coord: 8..223 score: 1.0E
IPR025718	Histone deacetylase complex subunit SAP30, Sin3 binding domain	PFAM	PF13867	SAP30_Sin3_bdg	coord: 165..219 score: 1.5
None	No IPR available	PANTHER	PTHR13286:SF8	SUBFAMILY NOT NAMED	coord: 8..223 score: 1.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G007910	Cucsa.106720	Cucumber (Gy14) v1	cgycmoB0245
CmoCh04G007910	CmaCh04G007420	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G007910	Cla014613	Watermelon (97103) v1	cmowmB671
CmoCh04G007910	Csa4G047910	Cucumber (Chinese Long) v2	cmocuB705
CmoCh04G007910	MELO3C016365	Melon (DHL92) v3.5.1	cmomeB686
CmoCh04G007910	ClCG07G008240	Watermelon (Charleston Gray)	cmowcgB670
CmoCh04G007910	CSPI04G05700	Wild cucumber (PI 183967)	cmocpiB715
CmoCh04G007910	Lsi07G002730	Bottle gourd (USVL1VR-Ls)	cmolsiB692
CmoCh04G007910	Cp4.1LG01g06780	Cucurbita pepo (Zucchini)	cmocpeB684
CmoCh04G007910	MELO3C016365.2	Melon (DHL92) v3.6.1	cmomedB779
CmoCh04G007910	CsaV3_4G005860	Cucumber (Chinese Long) v3	cmocucB0833
CmoCh04G007910	Cla97C07G135360	Watermelon (97103) v2	cmowmbB748
CmoCh04G007910	Bhi01G001856	Wax gourd	cmowgoB0853
CmoCh04G007910	CsGy4G005570	Cucumber (Gy14) v2	cgybcmoB521
CmoCh04G007910	Carg14139	Silver-seed gourd	carcmoB1259

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G007910	Wax gourd	cmowgoB0843
CmoCh04G007910	Cucurbita moschata (Rifu)	cmocmoB285
CmoCh04G007910	Cucurbita maxima (Rimu)	cmacmoB337
CmoCh04G007910	Cucurbita pepo (Zucchini)	cmocpeB667
CmoCh04G007910	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G007910	Silver-seed gourd	carcmoB1371