Cp4.1LG01g06380 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g06380
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING/U-box protein
LocationCp4.1LG01 : 113270 .. 124479 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTTTCATTCTAACTATTTAAAACATTTTCTCAAAAGGAGTCAAAATTCCTTCCATTTGTCAATCCGTCAAGATCCAATAAGGAAAAAAATGCGGAGACCCAGCTTCAAGAAAACAAGGCTTCAAATTCCACTGGTGCCACCATAACACAATTCCAAGCTCCAATTGCACAGTTCATCCGTCAAATTCTGTATGAAGTTTCGAATTGAAGAGAGAGATTCTCATTCCTGGTGTGAAATTCCAGCATGATCGATTGTTCCAGGTATCATAATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATCCTCTTCTGCAGTTTCACCTCACCATATCAGTCCTCCGCCTTCATCTCTTAGGTCACCTTCATCCGTACCCGCCGCCGCCGCCGCCGCGCAGTCACCACTGGCTCTCGCTCCTCTGACGACCCACATCTCCAATTCCCATCGGGAGTCGCTTCCTCCGCCGCCTCCTCCGCCATCGGACCATGTTGCCGGACCAGTGGTGCCGGTTGCGGCGGCCCAATCCGCCGGTGATTCTGTTGTAACTATGGCTTGCCCGCTGGCTAGGGTTCGCCTGTCTGATATTTCCCCTTACGACGGCGCGCCTGGGGGGTCCTACGTGAGGGCTGTTGAGGCTTTGTCTGGATCCTTGATGAGATATAATGCAGCTGTGATTGAATTGGAGAATGAAGGTGCTGCTCTCACTCGGTGCGGTCTTGAAGCGGCTAGGTTGTTTCTCAAGAGCCGGGCGCAGAGTGGTGGAAAAGGGCGAGGTGTTTATATGTATAGAGCCGGAAGGTTATTATAGCTTATACTCTCGTTTTTACCATGTTGATTGTTTAGCTCTCATGGAACGCTTTGTGGAACCGGGAAAGTAGATACTTCCTGGGATCTACCTTCTTGGAACTGTTTGTGGAACAAGGAAATTATTCATGCTGATTTATGCAGCTTTACATCAGCTCAAATAGATATGTTAGTCAACTAGTTTACTCTAATTAAAGGGGAAAACCTGAACGAAGTGGCTTTCTGATTGTTAGTTCCATCAGCTGGAAGCTTGACAAATTTAGTTAGTTTAAACAAAGAAAAATCGATTTTGTACCCTCTCCCTTAAATTGTACCCTTTTCGTTAAAAGTGAATTTGGTAAATTGTCTTGCCAAATCTTAATGCTAAGGTTCAAGAGAGAAGCCCTTTATCTCCAACTTGGTGTGTGATGTGCTATGTACAAGCCCTTTCTCCAACTTGGTGTGTGATGTGCTATGTACAAGATGAGTCCCAGTCACTTATTCCCATCATGTTCCTTTACCTACAGTGTATAGTCCATCAACAGAATTTTTTTTCTTGAATTTATGGTTTGAGAGAAACAATTGTATCTCAAGATTTAGGGGAGTTCAGAATATTTTCATTAAAGATAATGCAGAGATCAACGAAGACCTATTTCCAGAAAGAGACAATTAAATGGGCAAGTGAAGATCTAACTTTAAGCGTTATAATAGCATGTTTGTCATAGATTCCAAATAAATTTGTTTACATTTATAGATATTCTGACTCTAATGTGGTTCAACTAGAAAATAAACCATGGTAGAGTGAGCATGGATATTGTGAGGTTTTTTCTTCTTTCAATTTTTAACTTTTAATAAGAAACTAACCTTCTAATAAGAAAGTGAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNACAAAAGGGAATCCAGATGCAACCAAAGTAGGTATTGTTGTGTAGTTGATGTGAGCATATTGTCATGAGGTGAGTACTGGCAAACCTGTGGTGCCTAGGATGCTTTCTTAGTACGACGATCCTTAGTCAAACTTTGAGAATCGAAGAATAGTGCTTTTACTGTAACAAGGATGTATATAAGGGGGAGGCCCTAGGAGAGCTTCTTCGTTGTTCTGCTTTGTTACTTTTTGTGTTGCTTGTGCTGCAAGTTATGTGATGGAGGCCTCACGCTTTTGTGATGGATAAGTCAGTTATTCTTATGTATGCTAAATTATAATTTTGAGCTATTTTTATTGCAGAGCTGTGGAAGATTGGGAGTCTTGTCCTCCATGTATGGCTGATATTTTTAGATGTATGGGTAAAGCAGCTCGGGCTGCTTTATGTGCAATAGCCAGGCATCTTCGTTTGAGAAGCGAGTAAGAATGCTGTGAATATTCAGTTTTTTTTTGGTTAACTATGTTGAACTTATGTACCATGCAAATAAATACTCTGCAGTGTTTTCAATAATTTGCTTGATGATTCTCCACTTCCTGCTACTGAGGTATCCTCATCAGTGCTTGTTGCAATGCACCTGCATAATAGCTCTTTGCACAACTGCAAGGGTTATGGTGGGGGAGGAAAGTCAGCAATGAATGTTGAAGTTGAGAAGGGTTTACTGACATTGATTTCCTCAGACAATCCTGGTTTACAGGTGTACTTCAATGACCTTGATAACTGATCTCATTTAGATATTGATAGTTCATATATAGTTTCCAACACTGAAAACTTAGTGCATTAAAGTTTTATGGTATTGTATGGAACTTTTGTAATGACCTATACGGGTAACTTTTCTCATTGGTAGGTTTGTGATCCCAACGGTCGCTGGTACCTAGCAGATGCTGTGTTGGCTCCTGGGGATCTGTTACTGCTTACTGGCAAGGCACTCAGCCATGCTACAGCTGGCCTTCGTCCTGCTGCATCATATAAAGCTGCTCCTGATCATTCCTTGGGATCAAATTGTGGTGGGAGGTATGTAACTTTATATAAACTCTCTCTCTCTCTCTTGTGGTATATCTATGCTGTATGAGCATACCCTTTTAATTGTTGCTTGGATTGAATTACTTTATTCAGCATTGTGGTTGTAGGACTTCCCTTGCATTTAGACTCATGCCACAAACCAATGCCATATTAGACTGTTCTCCCATTGCAGCAGCTGGTCATGTTATTCCTCAAAGATATGGTCCAGTCTCTGTTAGCCAATTCATGGATGTTCTTTCCGCTGAGGAAGATGTATTATGTACTCATCTGGATAAGGACAACAATTGTGTAAGTCTTATAATCTGATTTTTTATAGAAACCCTGTTCAACTTTTTCTTGTCATGACAATCCATGGTTAAGATTCATAGTATGAAAAACTTCGGTGCATATTTAACACTGTTTTGCTTCTTTTTTCTTTACTGATATTTAATTCACTTAGTTGATTCTTTTCTCCATGTGGTTTTTGTTTTGTGCTTGCTGGTGCTTTAGTCAGGTTCAGTTTTTTCTTCATAAGTTCATATAAGTTGGAAATATAAGTGATTCGCACCTTAAAGCTATCAACATTTACACTTAAGTATATTCTAATTTTGGATCCTATCCAAATATCCTTCAATATTTTTTTAGTAATCCTACTGGGAGATGATCAAGAGTCAAACAGGAGAACGAATAGTGGTTGAATTATGGTATTTTTAAGAATTAATTTCCATTATATTAGCTAAATATATTGATTAATATGATATTTTAAAAAATTAATTTCAATTTTTTACCATGATGTTCGAGCCTAGTTAAGCCCACATACTTAGTGGCACTTTATTATTGAATTTTATATTTTGCATTATGACAGCATTTACATTTTATTAATATATTCTTCTTAATGTACAGATAGCTCGAAATGATCAAAATAAGGAGGCCTCATTAAGAAGTGTTCTCTCGGATCCGTTATCGTGAGTGACTTTCAATGGTGCTTACTATTGCTTTTCTTTTGAGCTTTTTTGTAATCTGTTCTGAAATTCAAAATTTGATCAAACCTTTCAAGCCTCCATTGGTTAGTGATGTCTGTGGAAATAAAATATCTATTGCTTTGTGCTATCACTATCATATGCCCTACAACATTTGATCGTTCAGTACTCTTTTCAGATAGCAACCCAAAATTTGGGTGAGTTAGGGAAGGATCTGGACTCTTCAACTAGGAATTCTTCTTAACATAAATTTTTGTAGTAGTTTCAACGGGAGAAATTTTGTACTGTAAAAAGGTTTTATCACAAGGATGTTTCTTGCAACAATATATTTAGAAAAATTTATTGCAGTGCTTATTTTTTACCATATGATCACTGTTTTCAATCATCCCTTGATACTGTGGAAAGTTTTCGACGTGGAGCCTGTATTAGAGAAATTACTCTTGGACTTCTGTTTGTACCAATTGGAAGGTCATTACAGACCTCCTAACCTATTCTCGTTTTTGTATATTTGATATAGTTCATTAAAGTTGTTTCTAATATACAAAAATGTATGTTTCGTGGACTGGGATATTGTTTTAACTTAATACCTACCCTTCACTTGTGAATATTGTTGTTATTAGTATTATTTATTACTTAAGATGACCGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGTGGTGGTGGTTAGAAAACTAGACTTCTTTTTTTTCTTTCTAAAGATTGAAGATCACAATAAAGTATAGTATAGAGGATTCTTCCCAACCAAATGTAGATTACCCCCAAAAAGGGGGGGAGAGAGAGAGAGAGAGGAGAATCTTGGTATATAATTTGTATATATTTTATTGTTTTTTATTAAGGAGAAAAAGAAAGTTGAGATCTCACATAGGAAAAAAAAAAACATGGTGATACCACTTGAAAAAAATATCAGATCTAACTTTCGCATCCACTTTGTCTCTAATTTATTGTTTTTATATTGTAACTATCTGTGTGGAAGTTAGGACTTCTCGTTGTGGCTACTTTCATATAATCAAATTCAGAATTACGTGAAGTTGTGCATGGTTCCATAAAAATTTCGTATTGACCAATGTTGGGAGAACTTCATGTTTTGATGTTTCTCCATTTTCTCTTTTTCTCTACTCCCAGTGGTGCATTCCTTGAGGATGCAATGTTTGTTTCGTGTGGACATTCATTTGGTGGTCTTATGCTGAGGAGGGTCATTGAGACGGTACGGGCATTCTTCTCCTAATTTATCCTCTTTTCTTATGGTATTTCCGCTATTGTTTATATCTTCGGGATATGTGTTTGATCTTTCTCACTTTCCACAGATTTAAAAAGCATGCCTTATCAATATTTATTCCCTTTGCTACTGTGAGTTAAATGAAGAATATCTAAAATTTAGGAGAGCCCATTTGGTATCCTTTCGCTTTTAGTTTTATTCGCTGCTTGCTATTTTGTTGTGTGTGTGTGTGTGTATATATATATATATATATATATTTTTTTTCTTTTTTTTTGCAATTTTTTTAGTGAGAAACCAAAATTTCAGTTTAAGATGAAGGGACGAAAGTATGGGCGAGATTTTGATGATGCTCGCTGTAGAAGGGAGCCAATGTAAAACAATAGCAAAAAACATAAAGGGAAATTACCGTGAAAGGTTACCAAATGAATTAACTTGAGCATGCTCAGCTGGTTAAGGTAATATATTTTCAACCAAAAGGTCAAATGGTTGAATTTCCACCTTGAACTATTGTTGAATCAGAAAAATTAGAAACAAAGGATAATTACAAAGACTTCTCGGTGGTAAGGCATTCAAGGAGAGGCATCGATGTAAGCCAAGACCCACGCCTCCACCCACAAATTTCTAACCCCTAAAATTTATCTTTTTTTAAGTTAAGTGCTCCGTGGAATATCCAAAAAGGAAAAAAGAAAAAGAAAAAAAACTTTATCTCAGGAAGGGGGATGGAGCACCACTGTCATCATCGACTGATAAGCCCTATTACAAACCAAAAAATTCACTGTGCACATGAAACAAATTCTCAAACAAAATTACTCTGAACACACCACAGAGGCTTTGAGATAATAGAATTCACCATGGAATGAAGTCAATGATGTTAATCTCTCTGCGAACAATAAGCCAAGCAAAAAATTGAACTTTCTTAGAGATTTTAAATTTCCAAGGTGAAGTAAACAGGAAGGAAAACGATTTGGCTGGGCACTCAAATGGGAAAAACCTACATGAAAATACATGTGCGTGACTTTGTTTCTTTTTGGGGAAAAAAAGAGAAGATATTCCTATTGGGTGAGGAAATCACCTTAGAAGATTATTTCCTCTCTAGAATTTTATTAAATCCATTCATGTCTAACAAGGCTTCGATTTGAGAGTAAGTTTCAATGATAAGTGGAGGCTTATGGGCAATCTTCATTTGAAAATTGAGCATTGGTCCGACAAGAAACACACCCTCCTGGAGTTTGTAAAGAGCTACGGAGGATGGATCTCCTTAAAGATTTTATCTTTTCCGTATTGGAAATGTTCTTTCTTTGAGGCAATAGGACAACACTTTTGTAATTTGGTAAACATTTCCTCCCAAGCAATTAATCACCCTAATAAAAGTAGAGGAAAATATTTGTGGCTTCATCCGAGCAGATATTGAAGTTAAGGGTGGTAATATTAGAAAATTTTCCCTCTGTTTTGGTGACATTGTTGCAACAGACTGTCCTAGCATGAGAAACTTTAATCGTGATGTTTTATCTATTGAAGAATTTTTGAATTTGGTGGTTGTAAGGAGATTTAATCAGGTAATGGAAGATGAAGGGTTCACTTTCTCAAACAAAGATGATTTGATGACAAGAGTTCATAGTTTAAAGTCCCTTCAGTGCATGATAAGATCGATATTTTGAATGATCTTTCTGAGCAACAATAATTTTGTGAGATACAAAACATTACATGTCGGTTTCTTGCACAAACAAAATAAATTGCCATTTTCATAAGGTGTTATTTCTCCTAATTTTATTGGACCAACTTTTGATGGAAGTGATTTGGATTTAAATAATGGAAGTGAACACCCAACGATCAATGTTATTAAAGACCATTTTATTGTTACTTATTCGAAATTTTATACAAGAAAAAATCATCTGACAATTCAATTTTCATGGTTCCAAACCCTTTCAATTTTATTAAGGCAGTTAAATTTTTGATGCTTTGGCAGTCAGATCCTATTGTATCATTAGTTGCAACCAACTGATTTTCATTTGGTAACTCAAGATGATGTTCTATGATCTGATAGGATAAGTCTTGAAAAAACAGGTTTAGAAATTTTAAAGACTAACGTATATTTTGTTGAAGATGTTTGCCTACACCTTGTGGTTCCTCTGATTCAGTCAGCTTCCCTTTGGAATTGGAGTCTTTGTAGCAAACGTTGCATAAGCCTTCTCATAATTTTGTTCATTTGTCATTCTCCATTCTAGGTTCAGACTTAATTCTGAAAAAAGGTGCATGACTTTCCTCCAAATTTTCAGATGTTCCATCATATTTTTCACAATTTGTTGACTCTAGTGTTGAATCATTAATCAGTGTAAGCATTGAGGAATAAAAAAACTGATCAAGAAATCCATTGTGAGAATGATAATCTTGAACAATCCTTAGCGCTCCTTTTTTCAGAAGATGTTGTACCTTCTCTAAAGTTTGTGGATGACCAGGTTAGAGAAGGTTCCAAGTGGAGTCCACCCTCTTGGTTACTAAAAAAATTTCATCTCTTATTGAGATTTACTGTTCTACTAGTCTAATATCATTTCTTGCCTTCATTTTCTTGAGCTGCTTTTCTGAATTTAAAGCCTTTGTGTCTTTGTTTTACTTTCCTCCATAAGAGTTTCTGCATTTTTAGCCAGAGTGGGAGCTCTTTCTTGCAGATTATTTGCTGTATTTTTGTTTGTTTCGCTAGTTGTTTTTCATTGTTTTATCCTCTTGTATTTTTAGGCTTACTTTTTGTATTTATTTTTTCGTTTTCATCGGGAACTTGTACCATTGAACTTCTCCTCATTTCCAATACATCAATGAATAGTTGTTTCTTGTTTTAAAAAAAAAATCCAGATGGGATTATGAATTTTTTATTTGATATCGTTTTATGAATTTCTAATGTCAAGGTACCAATAAGTACAAATGGTAACTTGAACTTTTGTTTGCTTTGACAGTCAAGATGCACATTATGCAACTCGGAAATTGATGCTGGGTCTCTGATTCCTAATATAGGTTCGTTAACATCATACTTGTGAACTTTGTGTCATGAACCCTCCCCCCTCTCTCTCTCTCTCTCTCTCTTAACTTTGATTTCTTGTATAGTGTTTCTCCTTTTGTAATATTTCATAGCTTCCTTTATATATGTGAGTGAAATTGGTGAAATCATTTACTTTTCATGATTTGGAATCCCTTAAAAGAACTCTACCAAACAAATAATCAAGATCAAATAAATAATTCAGTGTTCGTATAAAAATGCATATATAATTAAATTTGTGTGTTAGAAAATATCTGTAATTGTTTTGTTATGTTGTCTAATTGTCTTCCTTTTATTGAAATTGTAACACTGTAACTTCGTGTTGAACAAATTAAGAGGTATAAGGCAGTGTTTGAGACACGTCTAATAGAACACAAAATGTTTCTGCTTCATAGGTATTATTTTTCAACTTTTTTGAAGTTCTCTTGACCCCATTGATTCAAACTTGGATTTGACCAGATGGTTGGTGTGAAATTTTCTGAGATCATTTTAACCCATAAGAAAATCTGTCTTGGTAATGATTCAAAGTGAGTTGCTGAGAACAATAAAAGTGAAGAAAACAGAGCATTTGAAAACTTCATCGAATGATGTTTGTGGAGGAAGGAAAAAGAAAAAAAAAGGCGTTTAATTGTTTATCAGTAATTTATTTTAAAATTATAACAGTATCAAGAATGCATTGGTTCTTTCAAAAACGTCAGATATTAGTTAAACTTAAAATGTTTCATAAACTATTGGAACATATGAAAGAAAAGAAAAAGGTGACACTTGGAATAATAAATTACTTATTTATTTTACCAAAATTCTTAACCAAAATAATTAAATTTTCTTCGTAACAGAATTGAAAATATAAGAAACTTAGAAGGGGGAATGGAAAATACAAATAACTCTTAACATTTGTCTTTGCTCTTCTTCCGAGTAAAACATTATGTTTAATCACATATCTAAAAAGTCATAAATAGGTATAAGAGTCATATAGTAGTCAAAGTGTCGAAGCTGGTGAACAGTGAGATTTGGGAGTTCTGGTTATAAGAATAAAAGTATCAAGTATGTTAAGGACTATAAAACATAAATGAGAATAAAGTACTATTTTCTGTTTTTGTGGTTTCCCTTAATATCAATTAATCCATCAACTACGCCTTCTTCTTTTTCTTCTTTTTCTTCTTATTTCAATTTGTGTTAGTTTCTTTTCATTTGAATTTGTACGACTGAAGTGGCNTCCTTTTTAAAAAAGTTCATGTTATAGAAGTGTAATTCCATCTGCAGCACTTAGAGCCGCAGCTTCAGCTGTGAAGCAAGAAGATGACAGGAGGCTATTCCACAATGCAGCATTGAGGAAGCGTCGGAAGGAAATGGGCGACCAGATGGATCCAATGAGAAGATTAAACAGGGTAATTTATTTATTTATTATTATTATTATCTTTTTTTGTGAAGAACATCAATAATACTGGTGGGAAGTTGGAAATTGGAAATTGTGACCTCAAATAATAGAATTGGCTTTGACCGAAAGAATCATCCATGCAAGATGTTTATCTAATTCTGAAGTGCCATCCGGGAAATTGGACTTAAAAACATAGTTACAAATGTAAAAATTGGGGGAGGAAACTTCTAAGCCATAAAAGACTCGGTGTTTCTATCTTTCCTGTCTAATCGTATATATGTAAACAGCTTATACATTTTGGAAATCATGTTTCATCATGCCTGTCGAGGAGTAGGTTTAAAGTACGCACGTCATTTTATATAACTGTAAGTTGAGATAACATGGCTTGAAAAAATGTTATACGGCTGTTTGATTTTTATCCTAAAACTGATCCTAATGATTTGTAAAAGGAAACCATGATATAATCGATCTGATATTATATGAATTTTAGCTTGGTAGCAGATGCCTTTTAGTATTGTAGGCTTTCATACAGTTAGCAAGAACTTGATTACTGATGTGTAATTTGATCGAAGATGTCAACATTTTGACCATCTGAAAAACTTGAGTGAAACGATTGGTTCAGTCTACGACAAGGTATCATAAATCAATTGTTTGAGTTCTCAATTGCAACCTAAATTATGTATGTTGCAACTTGAAAAGAAAAGAATTCCTTGAGCTCCTGGCTATTTGGTATTCTAAATAATCTTTATGCGCTATGTTCAAGATTTCAGATGCAAGACATTGCTTAATGTTGTAATTTTTCTAGTTTATAAAGACCTAATACAATCATCTTCAGGAAAACGGTGATATTGCCATCGATGATGGAATCCATCGAGGAGTTCAATATCCCTTTGCAGTAAATGAAAAGGTCCTAATAAAGGTGAACAATTTTCTATCATATTCTGACTTTTTTCTTTTTAACTACTTGATGAAGTTCAGAATTTGAGAAGCGTTCTGGTATATCTTAGGGAAATAGGAGAACACCAGAAAAATTTGTTGGGAAAGAAGCGGTCATCACATCCCAGTGTCTGAATGGCTGGTTAGTACGTCATATTACAAAGTGATAGTTCATGTTCTTCTATAGGACTACATAGTTCGTTGTCTCATCAGACATTGTAGTTATAATTTTCTTCCTTAACCTTCAGGTATTTACTAAAAATCATTGGGACTGGAGAAAATGTTCGGTTGCAATATCGGTCTCTTAGGAAGATTCTGAACACGACACCAGCTAACGAGGATAGCTGTCCCTCACAGCCCCTTCAGCACAGCAGCTCATAAAACTCTCTGGATGTTGATGATTAGTCCGGAGCAACAAGTTGAATTCAAATCACGGTTTGGTCAGCAGAAGATTGTGAATTTGTTTGGACGGTGATATATTTATCATCAAGCATCAGAACAGCAGCTGTTAGTTGGTTTTAGGTTTCTGTTACATGCTTAAAAAAATTCTGGGAAGTGTATTTAGATTTTTGTTTAGTACGTGAAGTATCATTAAATTATAGGCCCCAAGAAGACCTCTCGATGTATCATTAGGCTTGAGATGAGAGACAAATTATATGCAAATTGAGACTTGAGGCATGGATTGTGGGCCGAGAACACTTGGCACATCCTATCAACTAAAGCTTTTTATTGGAAGCCTGCCGTGAGTAATTTTCAATCAACGGAGCACATTTAGGTTCTTAAGCATAGTCCCTTTTTGTTAAAAAGAACTAATTTAGGCTTTCTAAAGCCGCACG

mRNA sequence

ACTTTTCATTCTAACTATTTAAAACATTTTCTCAAAAGGAGTCAAAATTCCTTCCATTTGTCAATCCGTCAAGATCCAATAAGGAAAAAAATGCGGAGACCCAGCTTCAAGAAAACAAGGCTTCAAATTCCACTGGTGCCACCATAACACAATTCCAAGCTCCAATTGCACAGTTCATCCGTCAAATTCTGTATGAAGTTTCGAATTGAAGAGAGAGATTCTCATTCCTGGTGTGAAATTCCAGCATGATCGATTGTTCCAGGTATCATAATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATCCTCTTCTGCAGTTTCACCTCACCATATCAGTCCTCCGCCTTCATCTCTTAGGTCACCTTCATCCGTACCCGCCGCCGCCGCCGCCGCGCAGTCACCACTGGCTCTCGCTCCTCTGACGACCCACATCTCCAATTCCCATCGGGAGTCGCTTCCTCCGCCGCCTCCTCCGCCATCGGACCATGTTGCCGGACCAGTGGTGCCGGTTGCGGCGGCCCAATCCGCCGGTGATTCTGTTGTAACTATGGCTTGCCCGCTGGCTAGGGTTCGCCTGTCTGATATTTCCCCTTACGACGGCGCGCCTGGGGGGTCCTACGTGAGGGCTGTTGAGGCTTTGTCTGGATCCTTGATGAGATATAATGCAGCTGTGATTGAATTGGAGAATGAAGGTGCTGCTCTCACTCGGTGCGGTCTTGAAGCGGCTAGGTTGTTTCTCAAGAGCCGGGCGCAGAGTGGTGGAAAAGGGCGAGGTGTTTATATGTATAGAGCCGGAAGAGCTGTGGAAGATTGGGAGTCTTGTCCTCCATGTATGGCTGATATTTTTAGATGTATGGGTAAAGCAGCTCGGGCTGCTTTATGTGCAATAGCCAGGCATCTTCGTTTGAGAAGCGATGTTTTCAATAATTTGCTTGATGATTCTCCACTTCCTGCTACTGAGGTATCCTCATCAGTGCTTGTTGCAATGCACCTGCATAATAGCTCTTTGCACAACTGCAAGGGTTATGGTGGGGGAGGAAAGTCAGCAATGAATGTTGAAGTTGAGAAGGGTTTACTGACATTGATTTCCTCAGACAATCCTGGTTTACAGGTTTGTGATCCCAACGGTCGCTGGTACCTAGCAGATGCTGTGTTGGCTCCTGGGGATCTGTTACTGCTTACTGGCAAGGCACTCAGCCATGCTACAGCTGGCCTTCGTCCTGCTGCATCATATAAAGCTGCTCCTGATCATTCCTTGGGATCAAATTGTGGTGGGAGGACTTCCCTTGCATTTAGACTCATGCCACAAACCAATGCCATATTAGACTGTTCTCCCATTGCAGCAGCTGGTCATGTTATTCCTCAAAGATATGGTCCAGTCTCTGTTAGCCAATTCATGGATGTTCTTTCCGCTGAGGAAGATGTATTATGTACTCATCTGGATAAGGACAACAATTGTATAGCTCGAAATGATCAAAATAAGGAGGCCTCATTAAGAAGTGTTCTCTCGGATCCGTTATCTGGTGCATTCCTTGAGGATGCAATGTTTGTTTCGTGTGGACATTCATTTGGTGGTCTTATGCTGAGGAGGGTCATTGAGACGTCAAGATGCACATTATGCAACTCGGAAATTGATGCTGGGTCTCTGATTCCTAATATAGCACTTAGAGCCGCAGCTTCAGCTGTGAAGCAAGAAGATGACAGGAGGCTATTCCACAATGCAGCATTGAGGAAGCGTCGGAAGGAAATGGGCGACCAGATGGATCCAATGAGAAGATTAAACAGGGAAAACGGTGATATTGCCATCGATGATGGAATCCATCGAGGAGTTCAATATCCCTTTGCAGTAAATGAAAAGGTCCTAATAAAGGGAAATAGGAGAACACCAGAAAAATTTGTTGGGAAAGAAGCGGTCATCACATCCCAGTGTCTGAATGGCTGGTATTTACTAAAAATCATTGGGACTGGAGAAAATGTTCGGTTGCAATATCGGTCTCTTAGGAAGATTCTGAACACGACACCAGCTAACGAGGATAGCTGTCCCTCACAGCCCCTTCAGCACAGCAGCTCATAAAACTCTCTGGATGTTGATGATTAGTCCGGAGCAACAAGTTGAATTCAAATCACGGTTTGGTCAGCAGAAGATTGTGAATTTGTTTGGACGGTGATATATTTATCATCAAGCATCAGAACAGCAGCTGTTAGTTGGTTTTAGGTTTCTGTTACATGCTTAAAAAAATTCTGGGAAGTGTATTTAGATTTTTGTTTAGTACGTGAAGTATCATTAAATTATAGGCCCCAAGAAGACCTCTCGATGTATCATTAGGCTTGAGATGAGAGACAAATTATATGCAAATTGAGACTTGAGGCATGGATTGTGGGCCGAGAACACTTGGCACATCCTATCAACTAAAGCTTTTTATTGGAAGCCTGCCGTGAGTAATTTTCAATCAACGGAGCACATTTAGGTTCTTAAGCATAGTCCCTTTTTGTTAAAAAGAACTAATTTAGGCTTTCTAAAGCCGCACG

Coding sequence (CDS)

ATGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATCCTCTTCTGCAGTTTCACCTCACCATATCAGTCCTCCGCCTTCATCTCTTAGGTCACCTTCATCCGTACCCGCCGCCGCCGCCGCCGCGCAGTCACCACTGGCTCTCGCTCCTCTGACGACCCACATCTCCAATTCCCATCGGGAGTCGCTTCCTCCGCCGCCTCCTCCGCCATCGGACCATGTTGCCGGACCAGTGGTGCCGGTTGCGGCGGCCCAATCCGCCGGTGATTCTGTTGTAACTATGGCTTGCCCGCTGGCTAGGGTTCGCCTGTCTGATATTTCCCCTTACGACGGCGCGCCTGGGGGGTCCTACGTGAGGGCTGTTGAGGCTTTGTCTGGATCCTTGATGAGATATAATGCAGCTGTGATTGAATTGGAGAATGAAGGTGCTGCTCTCACTCGGTGCGGTCTTGAAGCGGCTAGGTTGTTTCTCAAGAGCCGGGCGCAGAGTGGTGGAAAAGGGCGAGGTGTTTATATGTATAGAGCCGGAAGAGCTGTGGAAGATTGGGAGTCTTGTCCTCCATGTATGGCTGATATTTTTAGATGTATGGGTAAAGCAGCTCGGGCTGCTTTATGTGCAATAGCCAGGCATCTTCGTTTGAGAAGCGATGTTTTCAATAATTTGCTTGATGATTCTCCACTTCCTGCTACTGAGGTATCCTCATCAGTGCTTGTTGCAATGCACCTGCATAATAGCTCTTTGCACAACTGCAAGGGTTATGGTGGGGGAGGAAAGTCAGCAATGAATGTTGAAGTTGAGAAGGGTTTACTGACATTGATTTCCTCAGACAATCCTGGTTTACAGGTTTGTGATCCCAACGGTCGCTGGTACCTAGCAGATGCTGTGTTGGCTCCTGGGGATCTGTTACTGCTTACTGGCAAGGCACTCAGCCATGCTACAGCTGGCCTTCGTCCTGCTGCATCATATAAAGCTGCTCCTGATCATTCCTTGGGATCAAATTGTGGTGGGAGGACTTCCCTTGCATTTAGACTCATGCCACAAACCAATGCCATATTAGACTGTTCTCCCATTGCAGCAGCTGGTCATGTTATTCCTCAAAGATATGGTCCAGTCTCTGTTAGCCAATTCATGGATGTTCTTTCCGCTGAGGAAGATGTATTATGTACTCATCTGGATAAGGACAACAATTGTATAGCTCGAAATGATCAAAATAAGGAGGCCTCATTAAGAAGTGTTCTCTCGGATCCGTTATCTGGTGCATTCCTTGAGGATGCAATGTTTGTTTCGTGTGGACATTCATTTGGTGGTCTTATGCTGAGGAGGGTCATTGAGACGTCAAGATGCACATTATGCAACTCGGAAATTGATGCTGGGTCTCTGATTCCTAATATAGCACTTAGAGCCGCAGCTTCAGCTGTGAAGCAAGAAGATGACAGGAGGCTATTCCACAATGCAGCATTGAGGAAGCGTCGGAAGGAAATGGGCGACCAGATGGATCCAATGAGAAGATTAAACAGGGAAAACGGTGATATTGCCATCGATGATGGAATCCATCGAGGAGTTCAATATCCCTTTGCAGTAAATGAAAAGGTCCTAATAAAGGGAAATAGGAGAACACCAGAAAAATTTGTTGGGAAAGAAGCGGTCATCACATCCCAGTGTCTGAATGGCTGGTATTTACTAAAAATCATTGGGACTGGAGAAAATGTTCGGTTGCAATATCGGTCTCTTAGGAAGATTCTGAACACGACACCAGCTAACGAGGATAGCTGTCCCTCACAGCCCCTTCAGCACAGCAGCTCATAA

Protein sequence

MQQQQQQQQQQQQSSSAVSPHHISPPPSSLRSPSSVPAAAAAAQSPLALAPLTTHISNSHRESLPPPPPPPSDHVAGPVVPVAAAQSAGDSVVTMACPLARVRLSDISPYDGAPGGSYVRAVEALSGSLMRYNAAVIELENEGAALTRCGLEAARLFLKSRAQSGGKGRGVYMYRAGRAVEDWESCPPCMADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDSPLPATEVSSSVLVAMHLHNSSLHNCKGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCDPNGRWYLADAVLAPGDLLLLTGKALSHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLMPQTNAILDCSPIAAAGHVIPQRYGPVSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAFLEDAMFVSCGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIALRAAASAVKQEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYPFAVNEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANEDSCPSQPLQHSSS
Homology
[Close]
BLAST of Cp4.1LG01g06380 vs. Swiss-Prot
Match: PUB62_ARATH (U-box domain-containing protein 62 OS=Arabidopsis thaliana GN=PUB62 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 6.7e-33
Identity = 74/193 (38.34%), Postives = 116/193 (60.10%), Query Frame = 1 

Query: 395 DNNC-------IARNDQNKEASLRSVLSDPLSGAFLEDAMFVSCGHSFGGLMLRRVIETS 454
           DN C       ++ +  N   SLR++LSDP +G+ + DAM + CGH+FG   + +V +  
Sbjct: 160 DNGCDFSGRRDLSSSSSNSIESLRTILSDPTTGSLMADAMILPCGHTFGAGGIEQVKQMK 219

Query: 455 RCTLCNSEIDAGSLIPNIALRAAASAVKQEDDRRLFHNAALRKRRKEMGDQMDPMRRLNR 514
            C  C+  +   S+ PN+ LR A  A  +E++ +  H +   KR++E  DQ      +  
Sbjct: 220 ACCTCSQPVSEDSITPNLTLRVAVQAFCREENSQSNHPS---KRKREGFDQERRAFGVTN 279

Query: 515 ENGDIAIDDGIHRGVQYPFAVNEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGT 574
            +G        ++   +PFAV ++V+IKGN+RTP +FVG+EAV+T+QCLNGWY++K +  
Sbjct: 280 HSGRSR-----NKSNHFPFAVADRVIIKGNKRTPPRFVGREAVVTTQCLNGWYVVKTLDN 339

Query: 575 GENVRLQYRSLRK 581
            E+V+LQYRSL K
Sbjct: 340 AESVKLQYRSLAK 344

[Close]
BLAST of Cp4.1LG01g06380 vs. Swiss-Prot
Match: PUB63_ARATH (U-box domain-containing protein 63 OS=Arabidopsis thaliana GN=PUB63 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 9.7e-32
Identity = 72/173 (41.62%), Postives = 105/173 (60.69%), Query Frame = 1 

Query: 409 SLRSVLSDPLSGAFLEDAMFVSCGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIALR 468
           SL+++LSDP++GA + DA  + CGHSFG   L+ V +   C  C+     GS  PN++LR
Sbjct: 201 SLKAILSDPVTGALMNDATILPCGHSFGAGGLKEVKKMKACFTCSQPTLEGSEKPNLSLR 260

Query: 469 AAASAVKQEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYPFAV 528
               A +QE+D    H     KRRKE  DQ       N     I       RG+Q+PF++
Sbjct: 261 IVVHAFRQEEDSDHIHTL---KRRKERSDQKRSFCIPN-----ITETPKSSRGIQFPFSI 320

Query: 529 NEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKI 582
            + ++I+GN+RTP +FVG+ AVI +QCLNGWY++K +   E+++LQ+ SL KI
Sbjct: 321 GDHIIIEGNKRTPPRFVGRIAVIMTQCLNGWYVVKTVDNSESIKLQHCSLAKI 365

[Close]
BLAST of Cp4.1LG01g06380 vs. TrEMBL
Match: A0A061E9U1_THECC (RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_011078 PE=4 SV=1)

HSP 1 Score: 823.2 bits (2125), Expect = 2.1e-235
Identity = 445/600 (74.17%), Postives = 490/600 (81.67%), Query Frame = 1 

Query: 12  QQSSSAVSPHHISPPP-----SSLRSPSSVPAAAAAAQSPLALAPLTTHISNSHRESLPP 71
           QQ   A  P+   PPP     SSLRSP+  P      QSPL L               P 
Sbjct: 7   QQPQQAPQPNPPPPPPPSSSASSLRSPTPTPT-----QSPLPL---------------PL 66

Query: 72  PPPPPSDHVAGPVVPVAAAQSAGDSVVTMACP---LARVRLSDISPYDGAPGGSYVRAVE 131
           PP  P DHV   VVP++AA  +G+ ++TM      L RVRLSDIS YDGAP GSYVRAVE
Sbjct: 67  PPRQPLDHV---VVPISAANPSGEPLLTMGTTPFLLPRVRLSDISAYDGAPSGSYVRAVE 126

Query: 132 ALSGSLMRYNAAVIELENEGAALTRCGLEAARLFLKSRAQSGGKG-RGVYMYRAGRAVED 191
           +LSGSLMR NAAV+E  NE AAL RCGLEAARL+ +SR  + GKG RGVYMYRAGRA+ED
Sbjct: 127 SLSGSLMRNNAAVVEFGNEDAALMRCGLEAARLYFRSRVNTVGKGSRGVYMYRAGRALED 186

Query: 192 WESCPPCMADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDSPLPATEVSSSVLVAMH 251
           W+S PPCMADIFRCMGKAAR ALCAIARHLRLRSDVFN+LLDD+PLPA EVSSSVLVA +
Sbjct: 187 WDSSPPCMADIFRCMGKAARVALCAIARHLRLRSDVFNHLLDDTPLPANEVSSSVLVATY 246

Query: 252 LHNSSLHNCKGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCDPNGRWYLADAVLAPGDL 311
            H  SL N KG  GGGK  M+ EVEKGLLTLISSD PGLQVCDPNGRWYLAD  LAPGD+
Sbjct: 247 SH-MSLQNGKGAIGGGKPGMSGEVEKGLLTLISSDGPGLQVCDPNGRWYLADGGLAPGDM 306

Query: 312 LLLTGKALSHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLMPQTNAILDCSPIAAAG 371
           LL+TGKALSHATAGLRPAASY+AAP++  G N GGRTSLAFRLMPQ NAILDCSP+AAAG
Sbjct: 307 LLITGKALSHATAGLRPAASYRAAPEYLSGINNGGRTSLAFRLMPQGNAILDCSPVAAAG 366

Query: 372 HVIPQRYGPVSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAF 431
           HVIPQ Y P+SVSQFMD LSAEEDV+C     DN C++RN+ NKE SLRSVLSDPLSGAF
Sbjct: 367 HVIPQSYVPISVSQFMDELSAEEDVVCNR--SDNTCVSRNNFNKEPSLRSVLSDPLSGAF 426

Query: 432 LEDAMFVSCGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIALRAAASAVKQEDDRRL 491
           LEDAM VSCGHSFGGLMLRRV++ SRCTLC+++ID+GSLIPNIALRAAA+AVKQEDDRRL
Sbjct: 427 LEDAMVVSCGHSFGGLMLRRVLDMSRCTLCSADIDSGSLIPNIALRAAAAAVKQEDDRRL 486

Query: 492 FHNAALRKRRKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYPFAVNEKVLIKGNRRTPE 551
           FHNAALRKRRKEMG+Q+DP RR +RENGD+A DDG+HRGVQYPF+VNEKVLIKGNRRTPE
Sbjct: 487 FHNAALRKRRKEMGEQIDPSRRSSRENGDVAADDGLHRGVQYPFSVNEKVLIKGNRRTPE 546

Query: 552 KFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANEDSCPSQPLQHSSS 603
           KFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSL KILN  P  ED CPSQP+Q+SSS
Sbjct: 547 KFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLCKILNPQPI-EDRCPSQPIQNSSS 579

[Close]
BLAST of Cp4.1LG01g06380 vs. TrEMBL
Match: B9HI63_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s08530g PE=4 SV=2)

HSP 1 Score: 805.1 bits (2078), Expect = 6.0e-230
Identity = 443/602 (73.59%), Postives = 492/602 (81.73%), Query Frame = 1 

Query: 5   QQQQQQQQQSSSAVSPHHISPPPSSLRSPSSVPAAAAAAQSPLALAPLTTHISNSHRESL 64
           +  Q Q QQ+S+A+ PH +    S+ RSP++   +   +Q PL LAPL+   S+SHR   
Sbjct: 12  RHHQHQHQQTSTALPPHPVPLSTSAHRSPAT--PSHTQSQPPLPLAPLS---SSSHRL-- 71

Query: 65  PPPPPPPSDHVAGPVVPVAAAQSAGDSVVTMACPLARVRLSDISPYDGAPGGSYVRAVEA 124
              PPP  DHV  PV   +AA  + D   T    LARVRLSDISPYDGAPGG YVRAV+A
Sbjct: 72  ---PPPALDHVISPVA--SAAHHSADPAPT----LARVRLSDISPYDGAPGGPYVRAVDA 131

Query: 125 LSGSLMRYNAAVIELENEGAALTRCGLEAARLFLKSRAQSGG----KGRGVYMYRAGRAV 184
           LSGSLMR+NAAVIEL +E A+L RCGLEAARL+ +SR+Q+G      GRGVYMYRAGR V
Sbjct: 132 LSGSLMRHNAAVIELGSEEASLMRCGLEAARLYFRSRSQNGVVKGCSGRGVYMYRAGRPV 191

Query: 185 EDWESCPPCMADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDSPLPATEVSSSVLVA 244
           EDW+S PPCMA+IFRCMGKAAR+ALCAIARHLRLRSDVFN LLDD+PLPA EVSSSVLVA
Sbjct: 192 EDWDSSPPCMAEIFRCMGKAARSALCAIARHLRLRSDVFNQLLDDTPLPAGEVSSSVLVA 251

Query: 245 MHLHNSSLHNCKGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCDPNGRWYLADAVLAPG 304
            + H +SL N KG  G GK A N EVEKGLLTLISSD+PGLQVCDPNGRWYLAD   AP 
Sbjct: 252 TYSH-TSLQNGKGAIGAGKPAANGEVEKGLLTLISSDSPGLQVCDPNGRWYLADCGSAPV 311

Query: 305 DLLLLTGKALSHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLMPQTNAILDCSPIAA 364
           DLLL+TGK LSH TAGLRPAASY+AAPD S G+N GGRTSL FRLMPQ NAILDCSPIAA
Sbjct: 312 DLLLITGKTLSHTTAGLRPAASYRAAPDFSSGTNSGGRTSLVFRLMPQGNAILDCSPIAA 371

Query: 365 AGHVIPQRYGPVSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSG 424
           AGHVIPQ Y P+SVSQFMD LSAEEDV+C     +N  +ARND NKE SLRSVLSDPLSG
Sbjct: 372 AGHVIPQSYVPISVSQFMDDLSAEEDVVCNQ--PNNTYVARNDMNKEPSLRSVLSDPLSG 431

Query: 425 AFLEDAMFVSCGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIALRAAASAVKQEDDR 484
           AFLEDAMFVSCGHSFGGLMLRRVI+ SRCTLCN+EI+AGSL+PN ALRAAASAVK EDDR
Sbjct: 432 AFLEDAMFVSCGHSFGGLMLRRVIDMSRCTLCNAEIEAGSLVPNYALRAAASAVKNEDDR 491

Query: 485 RLFHNAALRKRRKEMGDQMDPM-RRLNRENGDIAIDDGIHRGVQYPFAVNEKVLIKGNRR 544
           RLFHNA LRKRRKEMGD  D M +R + ENGDIA DDG+HRGVQYPFAVNEKV+IKGNRR
Sbjct: 492 RLFHNATLRKRRKEMGDHTDSMKKRPHGENGDIAADDGLHRGVQYPFAVNEKVVIKGNRR 551

Query: 545 TPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANEDSCPSQPLQH 602
           TPEKFVGKEA+ITSQCLNGWYLLKIIG+GENVRLQYRSLRKILN + A ED C SQP+Q+
Sbjct: 552 TPEKFVGKEAIITSQCLNGWYLLKIIGSGENVRLQYRSLRKILN-SEAIEDRCASQPIQN 593

[Close]
BLAST of Cp4.1LG01g06380 vs. TrEMBL
Match: A0A0B0MK27_GOSAR (U-box domain-containing 63-like protein OS=Gossypium arboreum GN=F383_25242 PE=4 SV=1)

HSP 1 Score: 800.8 bits (2067), Expect = 1.1e-228
Identity = 430/596 (72.15%), Postives = 483/596 (81.04%), Query Frame = 1 

Query: 12  QQSSSAVSPHHISPPPSSLRSPSSVPAAAAAAQSPLALAPLTTHISNSHRESLPPPPPPP 71
           QQ   A  P+   P  SSLRSP+S P      QSPL L P                   P
Sbjct: 7   QQPQQATPPNPPPPSDSSLRSPTSTPT-----QSPLPLRPRQ-----------------P 66

Query: 72  SDHVAGPVVPVAAAQSAGDSVVTM---ACPLARVRLSDISPYDGAPGGSYVRAVEALSGS 131
            +HVA   VP++AA  +G+ +VTM   A PLARVRLSDISPYDGAP  SYVRAVEA SGS
Sbjct: 67  LEHVA---VPISAAHPSGEPLVTMGTAALPLARVRLSDISPYDGAPSASYVRAVEAFSGS 126

Query: 132 LMRYNAAVIELENEGAALTRCGLEAARLFLKSRAQSGGKG-RGVYMYRAGRAVEDWESCP 191
           LMR+NAAVIE  NE AAL RC LEAARL+ +SR  + GKG RG YMYRAGR++EDW+S P
Sbjct: 127 LMRHNAAVIEFGNEDAALMRCALEAARLYFRSRVNTAGKGSRGFYMYRAGRSLEDWDSSP 186

Query: 192 PCMADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDSPLPATEVSSSVLVAMHLHNSS 251
           PCMADIFRCMGKAAR ALCAIARHLRL+SDVFN+LLDD+PLPA EVSSSVLVA + H  S
Sbjct: 187 PCMADIFRCMGKAARVALCAIARHLRLQSDVFNHLLDDTPLPANEVSSSVLVASYSH-MS 246

Query: 252 LHNCKGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCDPNGRWYLADAVLAPGDLLLLTG 311
           L N KG  GGGK     EVEKGLLTLISSD PGLQVCDPNGRWY ADA LAPGD+LL+TG
Sbjct: 247 LQNGKGAIGGGKPGTAGEVEKGLLTLISSDGPGLQVCDPNGRWYQADAGLAPGDMLLITG 306

Query: 312 KALSHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLMPQTNAILDCSPIAAAGHVIPQ 371
           KALSHATAGLRPAA+Y+AAP++  G N GGRTSLAFRLMPQ NAILDCSP+AAAGHVIPQ
Sbjct: 307 KALSHATAGLRPAATYRAAPEYLSGINNGGRTSLAFRLMPQGNAILDCSPVAAAGHVIPQ 366

Query: 372 RYGPVSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAFLEDAM 431
            Y P+SVSQFMD LSAEEDV+C     DN C+AR++ NK+ SLRSVLSDPLSGAFLEDA+
Sbjct: 367 SYVPISVSQFMDELSAEEDVVCNR--SDNTCVARSNLNKQPSLRSVLSDPLSGAFLEDAV 426

Query: 432 FVSCGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIALRAAASAVKQEDDRRLFHNAA 491
            VSCGHSFGGLMLRRV++ SRCTLC+++ID+GSLIPN+ALRAAA AVKQED+RRLFHNAA
Sbjct: 427 VVSCGHSFGGLMLRRVLDMSRCTLCSADIDSGSLIPNMALRAAALAVKQEDNRRLFHNAA 486

Query: 492 LRKRRKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYPFAVNEKVLIKGNRRTPEKFVGK 551
           LRKRRKEMGDQ+D  +R +RENG+I  +DG+HRGVQYPF+VNEKVLIKGNRRTPEKFVGK
Sbjct: 487 LRKRRKEMGDQIDLSKRSSRENGEIGAEDGLHRGVQYPFSVNEKVLIKGNRRTPEKFVGK 546

Query: 552 EAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILN-TTPANEDSCPSQPLQHSSS 603
           EAVITSQCLNGWYLLKIIG+GENVRLQYRSL KI+N  +   ED CPSQP+Q+SSS
Sbjct: 547 EAVITSQCLNGWYLLKIIGSGENVRLQYRSLCKIMNPQSTIEEDRCPSQPIQNSSS 574

[Close]
BLAST of Cp4.1LG01g06380 vs. TrEMBL
Match: B9HY26_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s17820g PE=4 SV=2)

HSP 1 Score: 795.8 bits (2054), Expect = 3.6e-227
Identity = 432/599 (72.12%), Postives = 488/599 (81.47%), Query Frame = 1 

Query: 12  QQSSSAVSPHHISPPPSSLRSPSSVPAAAAAAQSPLALAPLTTHISNSHRESLPPPPPPP 71
           QQ+S+ V+PH I    S+ RSP++   +   +QSPL+L PL+   S+SHR   PPPPPPP
Sbjct: 3   QQTSTTVAPHPIPLSTSTHRSPAT--PSHTQSQSPLSLVPLS---SSSHRFPPPPPPPPP 62

Query: 72  S-----DHVAGPVVPVAAAQSAGDSVVTMACPLARVRLSDISPYDGAPGGSYVRAVEALS 131
                 DHV  P+       SA       A  LA VRLSDISPYDGAPGG YVRAVEALS
Sbjct: 63  PPPPSLDHVISPIA------SAAHHSAEPALMLATVRLSDISPYDGAPGGPYVRAVEALS 122

Query: 132 GSLMRYNAAVIELENEGAALTRCGLEAARLFLKSRAQS----GGKGRGVYMYRAGRAVED 191
           GSLM++NAAVIEL +  A+L RCGLEAARL+ +SR+Q+    G   RGVYMYRAGR VED
Sbjct: 123 GSLMKHNAAVIELGSAEASLMRCGLEAARLYFRSRSQNGVVKGCSSRGVYMYRAGRPVED 182

Query: 192 WESCPPCMADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDSPLPATEVSSSVLVAMH 251
            +S PPCMA+IFRCMGKAAR+ALCAIARHLRLRSDVFN LLDD+PLPA EVSSSVLVA +
Sbjct: 183 CDSSPPCMAEIFRCMGKAARSALCAIARHLRLRSDVFNQLLDDTPLPAGEVSSSVLVATY 242

Query: 252 LHNSSLHNCKGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCDPNGRWYLADAVLAPGDL 311
            H +SL N KG  GGGK A+N EVEKGLLTLISSD+PGLQVCDPNG WYLAD   APG+L
Sbjct: 243 SH-TSLQNGKGAIGGGKMAVNGEVEKGLLTLISSDSPGLQVCDPNGHWYLADCSSAPGNL 302

Query: 312 LLLTGKALSHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLMPQTNAILDCSPIAAAG 371
           LL+TGK LSH TAGLRPAASY+AAPD+S G+N GGRTSLAFRLMPQ NAILDCSPIAAAG
Sbjct: 303 LLITGKTLSHTTAGLRPAASYRAAPDYSSGANSGGRTSLAFRLMPQGNAILDCSPIAAAG 362

Query: 372 HVIPQRYGPVSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAF 431
           HVIPQ Y P+SVSQF+D LSAEEDV C     DN  +A+ND NKE SLRSVLSDPLSGAF
Sbjct: 363 HVIPQSYVPISVSQFLDDLSAEEDVNCNR--PDNTYVAQNDVNKELSLRSVLSDPLSGAF 422

Query: 432 LEDAMFVSCGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIALRAAASAVKQEDDRRL 491
           LEDA+ VSCGHSFGGLMLRRV++ SRCTLCN+EI+AGSL+PN ALRAAA+AVK EDDRRL
Sbjct: 423 LEDAVVVSCGHSFGGLMLRRVLDMSRCTLCNAEIEAGSLVPNYALRAAAAAVKNEDDRRL 482

Query: 492 FHNAALRKRRKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYPFAVNEKVLIKGNRRTPE 551
           F+NA LRKRRKEMGD  D M+R +REN DIA  DG+HRGVQYPF+VNEKV+IKGNRRTPE
Sbjct: 483 FYNATLRKRRKEMGDHTDSMKRQHRENVDIAAADGLHRGVQYPFSVNEKVMIKGNRRTPE 542

Query: 552 KFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANEDSCPSQPLQHSS 602
           KFVGKEA+ITSQCLNGWYLLKIIG+GENVRLQYRSLRKIL ++ A ED C SQP+Q+SS
Sbjct: 543 KFVGKEAIITSQCLNGWYLLKIIGSGENVRLQYRSLRKIL-SSEAIEDRCASQPIQNSS 586

[Close]
BLAST of Cp4.1LG01g06380 vs. TrEMBL
Match: A0A0D2MC12_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G167300 PE=4 SV=1)

HSP 1 Score: 794.3 bits (2050), Expect = 1.1e-226
Identity = 428/596 (71.81%), Postives = 480/596 (80.54%), Query Frame = 1 

Query: 12  QQSSSAVSPHHISPPPSSLRSPSSVPAAAAAAQSPLALAPLTTHISNSHRESLPPPPPPP 71
           QQ   A  P+   P  SSLRSP+  P      QSPL L P                   P
Sbjct: 7   QQPQQATPPNPPPPSDSSLRSPTPTPT-----QSPLPLRPRQ-----------------P 66

Query: 72  SDHVAGPVVPVAAAQSAGDSVVTM---ACPLARVRLSDISPYDGAPGGSYVRAVEALSGS 131
            +HVA   VP++AA  +G+ +VTM   A PLARVRLSDISPYDGAP  SYVRAVEA SGS
Sbjct: 67  LEHVA---VPISAAHPSGEPLVTMGTAALPLARVRLSDISPYDGAPSASYVRAVEAFSGS 126

Query: 132 LMRYNAAVIELENEGAALTRCGLEAARLFLKSRAQSGGKG-RGVYMYRAGRAVEDWESCP 191
           LMR+NAAVIE  NE AAL RC LEAARL+ +SR  + GKG RG YMYRAGR++EDW+S P
Sbjct: 127 LMRHNAAVIEFGNEDAALMRCALEAARLYFRSRVNTVGKGSRGFYMYRAGRSLEDWDSSP 186

Query: 192 PCMADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDSPLPATEVSSSVLVAMHLHNSS 251
           PCMADIFRCMGKAAR ALCAIARHLRL+SDVFN+LLDD+PLPA EVSSSVLVA + H  S
Sbjct: 187 PCMADIFRCMGKAARVALCAIARHLRLQSDVFNHLLDDTPLPANEVSSSVLVASYSH-MS 246

Query: 252 LHNCKGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCDPNGRWYLADAVLAPGDLLLLTG 311
           L N KG  GGGK     EVEKGLLTLISSD PGLQVCDPNGRWY ADA LAPGD+LL+TG
Sbjct: 247 LQNGKGAIGGGKPGTAGEVEKGLLTLISSDGPGLQVCDPNGRWYQADAGLAPGDMLLITG 306

Query: 312 KALSHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLMPQTNAILDCSPIAAAGHVIPQ 371
           KALSHATAGLRPAA+Y+AAP++  G N GGRTSLAFRLMPQ NAILDCSP+AAAGHVIPQ
Sbjct: 307 KALSHATAGLRPAATYRAAPEYLSGINNGGRTSLAFRLMPQGNAILDCSPVAAAGHVIPQ 366

Query: 372 RYGPVSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAFLEDAM 431
            Y P+SVSQFMD LSAEEDV+C     DN C+ARN+ NK+ SLRSVLSDPLSGAFLEDA+
Sbjct: 367 SYVPISVSQFMDELSAEEDVVCNR--SDNTCVARNNLNKQPSLRSVLSDPLSGAFLEDAV 426

Query: 432 FVSCGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIALRAAASAVKQEDDRRLFHNAA 491
            VSCGHSFGGLML+RV++ SRCTLC+++ID+GSLIPN ALRAAA AVKQED+RRLFHNAA
Sbjct: 427 VVSCGHSFGGLMLKRVLDMSRCTLCSADIDSGSLIPNKALRAAALAVKQEDNRRLFHNAA 486

Query: 492 LRKRRKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYPFAVNEKVLIKGNRRTPEKFVGK 551
           LRKRRKEMGDQ+D  +R +RENG+   +DG+HRGVQYPF+VNEKVLIKGNRRTPEKFVGK
Sbjct: 487 LRKRRKEMGDQIDLSKRSSRENGEDGAEDGLHRGVQYPFSVNEKVLIKGNRRTPEKFVGK 546

Query: 552 EAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILN-TTPANEDSCPSQPLQHSSS 603
           EAVITSQCLNGWYLLKIIG+GENVRLQYRSL KI+N  +   ED CPSQP+Q+SSS
Sbjct: 547 EAVITSQCLNGWYLLKIIGSGENVRLQYRSLCKIMNPQSTIEEDRCPSQPIQNSSS 574

[Close]
BLAST of Cp4.1LG01g06380 vs. TAIR10
Match: AT3G19895.1 (AT3G19895.1 RING/U-box superfamily protein)

HSP 1 Score: 673.7 bits (1737), Expect = 1.1e-193
Identity = 359/534 (67.23%), Postives = 422/534 (79.03%), Query Frame = 1 

Query: 71  PSDHVAGPVVPVAAAQSAGDSVVTMA-CPLARVRLSDISPYDGAPGGSYVRAVEALSGSL 130
           P  H A PV P++AA  +GD ++ M+  PLARVRLS+I PY+GAP   Y +AVEALS SL
Sbjct: 32  PLSH-AIPVSPISAAYPSGDPILMMSGTPLARVRLSEILPYEGAPSPVYAKAVEALSVSL 91

Query: 131 MRYNAAVIELENEGAALTRCGLEAARLFLKSRAQS-GGKG-RGVYMYRAGRAVEDWESCP 190
           MRYNA+VIE+ +E  AL RCGLEAARL+ ++R+ +  GKG RG+ MYRAGR+VED +S P
Sbjct: 92  MRYNASVIEIGSEDTALMRCGLEAARLYFRTRSLTVSGKGNRGLSMYRAGRSVEDLDSSP 151

Query: 191 PCMADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDSPLPATEVSSSVLVAMHLHNSS 250
           PCMA+IFRC+GK ARAAL AIARHLRLRSDVFN++LDD PL   EVSSSVL+A + H +S
Sbjct: 152 PCMAEIFRCLGKVARAALSAIARHLRLRSDVFNHMLDDFPLAPNEVSSSVLLASYAH-AS 211

Query: 251 LHNCKGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCDPNGRWYLADAVLAPGDLLLLTG 310
           + N K   GGG  +  +EVEKGLLTL  SD  G+QVCDPNGRWY AD     GDLLL+TG
Sbjct: 212 IQNGKHASGGGNLSAKIEVEKGLLTLFCSDGTGIQVCDPNGRWYTADNGCGVGDLLLITG 271

Query: 311 KALSHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLMPQTNAILDCSPIAAAGHVIPQ 370
           KALSHATAGLRPAASY+   DH   ++  GR SLAFRLMP++NAILDCSPI AAGHVIPQ
Sbjct: 272 KALSHATAGLRPAASYRTTTDHLSATDTRGRASLAFRLMPKSNAILDCSPIEAAGHVIPQ 331

Query: 371 RYGPVSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAFLEDAM 430
            Y PVSVSQFMD L AE D L     K N  + R+D  KE SLRSVLSDP+SGAFLEDAM
Sbjct: 332 SYVPVSVSQFMDNLLAENDTLVNPPVKTN--VPRDDVCKEPSLRSVLSDPISGAFLEDAM 391

Query: 431 FVSCGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIALRAAASAVKQEDDRRLFHNAA 490
            VSCGHSFGGLMLRRV+E SRCTLCN+EI++GSL+PN ALRAAASA+KQ+DD+RLFHNAA
Sbjct: 392 VVSCGHSFGGLMLRRVLEMSRCTLCNTEIESGSLVPNHALRAAASAIKQQDDKRLFHNAA 451

Query: 491 LRKRRKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYPFAVNEKVLIKGNRRTPEKFVGK 550
           +R+RRKEM DQMD       ENGD A DDG+HR V YPFAVNEKVLIKGNRRTPEKFVGK
Sbjct: 452 MRRRRKEMSDQMDV------ENGDPATDDGMHRVVHYPFAVNEKVLIKGNRRTPEKFVGK 511

Query: 551 EAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANEDSCPSQPLQHSS 602
           EA++TSQCLNGWYLLKI+ +G+NVRLQYRSL+K++N          +QP++ +S
Sbjct: 512 EAIVTSQCLNGWYLLKIVESGDNVRLQYRSLKKMVNDDRGG--GLQAQPVESNS 553

[Close]
BLAST of Cp4.1LG01g06380 vs. TAIR10
Match: AT3G12940.1 (AT3G12940.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 152.1 bits (383), Expect = 1.1e-36
Identity = 111/315 (35.24%), Postives = 155/315 (49.21%), Query Frame = 1 

Query: 99  LARVRLSDISPYDGAPGGSYVRAVEALSGSLMRYNAAVIELENEGAALTRCGLEAARLFL 158
           L RV++ D+ P +G P  SY  AV  LS SL +Y+AA+I+      AL R GL++ARL+ 
Sbjct: 10  LGRVKVCDLVPSEGLPSDSYKLAVTTLSQSLAQYSAAIIQFPASDGALLRSGLDSARLYF 69

Query: 159 KSR--------------AQSGGKGRGVYM----------YRAG----RAVEDWESCPPCM 218
             R              +Q   K  G Y           YR G          E  P  +
Sbjct: 70  HQRDSYPATNNMIHTNDSQEWCKTSGYYADPQSWQESYEYRPGLTPTEPSNSMEFPPAGL 129

Query: 219 ADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDSPLPATEVSSSVLVAMHLHNSSLHN 278
            DIF  +GKAAR  L AI  +L LRS  F  +LD+ PL   EVSSSVL        S H 
Sbjct: 130 PDIFALLGKAARVVLDAIGFYLNLRSCPFTEILDNVPLRNCEVSSSVLSVCCYARPSFHG 189

Query: 279 CKGYGGGGKSAM------NVEVEKGLLTLISSDNPGLQVCDPNGRWYLADAVLAPGDLLL 338
            + +       +      + +++K L++ + SD  GL + D +G+W L D  L P + ++
Sbjct: 190 AQHHSLTEDEQLILYSDHDHQLDKSLISFVKSDKAGLHIRDMHGQWILVDVDLGPQEAVV 249

Query: 339 LTGKALSHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLMPQTNAILDCSPIAAAGHV 379
             G AL  ATAG    A ++    +SL  +  GR SLAF+LMP++   L CS + AAGH 
Sbjct: 250 YPGLALYQATAGYVSPAVHR-TDLNSLQGSIEGRFSLAFKLMPKSMTNLSCSEMRAAGHG 309

[Close]
BLAST of Cp4.1LG01g06380 vs. TAIR10
Match: AT5G05230.1 (AT5G05230.1 RING/U-box superfamily protein)

HSP 1 Score: 143.7 bits (361), Expect = 3.8e-34
Identity = 74/193 (38.34%), Postives = 116/193 (60.10%), Query Frame = 1 

Query: 395 DNNC-------IARNDQNKEASLRSVLSDPLSGAFLEDAMFVSCGHSFGGLMLRRVIETS 454
           DN C       ++ +  N   SLR++LSDP +G+ + DAM + CGH+FG   + +V +  
Sbjct: 160 DNGCDFSGRRDLSSSSSNSIESLRTILSDPTTGSLMADAMILPCGHTFGAGGIEQVKQMK 219

Query: 455 RCTLCNSEIDAGSLIPNIALRAAASAVKQEDDRRLFHNAALRKRRKEMGDQMDPMRRLNR 514
            C  C+  +   S+ PN+ LR A  A  +E++ +  H +   KR++E  DQ      +  
Sbjct: 220 ACCTCSQPVSEDSITPNLTLRVAVQAFCREENSQSNHPS---KRKREGFDQERRAFGVTN 279

Query: 515 ENGDIAIDDGIHRGVQYPFAVNEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGT 574
            +G        ++   +PFAV ++V+IKGN+RTP +FVG+EAV+T+QCLNGWY++K +  
Sbjct: 280 HSGRSR-----NKSNHFPFAVADRVIIKGNKRTPPRFVGREAVVTTQCLNGWYVVKTLDN 339

Query: 575 GENVRLQYRSLRK 581
            E+V+LQYRSL K
Sbjct: 340 AESVKLQYRSLAK 344

[Close]
BLAST of Cp4.1LG01g06380 vs. TAIR10
Match: AT2G40640.1 (AT2G40640.1 RING/U-box superfamily protein)

HSP 1 Score: 139.8 bits (351), Expect = 5.5e-33
Identity = 72/173 (41.62%), Postives = 105/173 (60.69%), Query Frame = 1 

Query: 409 SLRSVLSDPLSGAFLEDAMFVSCGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIALR 468
           SL+++LSDP++GA + DA  + CGHSFG   L+ V +   C  C+     GS  PN++LR
Sbjct: 201 SLKAILSDPVTGALMNDATILPCGHSFGAGGLKEVKKMKACFTCSQPTLEGSEKPNLSLR 260

Query: 469 AAASAVKQEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYPFAV 528
               A +QE+D    H     KRRKE  DQ       N     I       RG+Q+PF++
Sbjct: 261 IVVHAFRQEEDSDHIHTL---KRRKERSDQKRSFCIPN-----ITETPKSSRGIQFPFSI 320

Query: 529 NEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKI 582
            + ++I+GN+RTP +FVG+ AVI +QCLNGWY++K +   E+++LQ+ SL KI
Sbjct: 321 GDHIIIEGNKRTPPRFVGRIAVIMTQCLNGWYVVKTVDNSESIKLQHCSLAKI 365

[Close]
BLAST of Cp4.1LG01g06380 vs. NCBI nr
Match: gi|449445330|ref|XP_004140426.1| (PREDICTED: uncharacterized protein LOC101206682 [Cucumis sativus])

HSP 1 Score: 1036.9 bits (2680), Expect = 1.3e-299
Identity = 533/591 (90.19%), Postives = 547/591 (92.55%), Query Frame = 1 

Query: 12  QQSSSAVSPHHISPPPSSLRSPSSVPAAAAAAQSPLALAPLTTHISNSHRESLPPPPPPP 71
           QQSSSAVSPHHI+PPPSSLRSPSS P AA    SPL   PLTTH+SNSHRE        P
Sbjct: 9   QQSSSAVSPHHINPPPSSLRSPSSTPPAA---HSPL---PLTTHVSNSHRE--------P 68

Query: 72  SDHVAGPVVPVAAAQSAGDSVVTMACPLARVRLSDISPYDGAPGGSYVRAVEALSGSLMR 131
            DHVAGPV+     QSAGDS V MACPLARVRLSDI+PYDGAP GSYVRAVEALSGSL R
Sbjct: 69  CDHVAGPVL-----QSAGDSAVAMACPLARVRLSDIAPYDGAPAGSYVRAVEALSGSLTR 128

Query: 132 YNAAVIELENEGAALTRCGLEAARLFLKSRAQSGGKGRGVYMYRAGRAVEDWESCPPCMA 191
           YNAAVIELENE AALTRCGLEAARLF KSRAQSGGKGR VYMYRAGRAVEDW+SCPPCMA
Sbjct: 129 YNAAVIELENEAAALTRCGLEAARLFFKSRAQSGGKGRSVYMYRAGRAVEDWDSCPPCMA 188

Query: 192 DIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDSPLPATEVSSSVLVAMHLHNSSLHNC 251
           DIFRCMGKAARAALCAIARHLRLRSDVFNNLLDD+PLPAT+VSSSVLVAMHLHNSSLHNC
Sbjct: 189 DIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDTPLPATDVSSSVLVAMHLHNSSLHNC 248

Query: 252 KGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCDPNGRWYLADAVLAPGDLLLLTGKALS 311
           KG  GGGKSAMNVEVEKGLLTL SSDNPGLQVCDPNGRWYLAD VLAPGDLLL+TGKALS
Sbjct: 249 KGSIGGGKSAMNVEVEKGLLTLFSSDNPGLQVCDPNGRWYLADTVLAPGDLLLITGKALS 308

Query: 312 HATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLMPQTNAILDCSPIAAAGHVIPQRYGP 371
           HATAGLRPAASY+ A DHSLGSNC GRTSLAFRLMPQTNAILDCSPIAAAGHVIPQRYGP
Sbjct: 309 HATAGLRPAASYRVASDHSLGSNCVGRTSLAFRLMPQTNAILDCSPIAAAGHVIPQRYGP 368

Query: 372 VSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAFLEDAMFVSC 431
           VSVSQFMD LSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAFLEDA FVSC
Sbjct: 369 VSVSQFMDDLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAFLEDATFVSC 428

Query: 432 GHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIALRAAASAVKQEDDRRLFHNAALRKR 491
           GHSFGGLMLRRVIETSRCT+CNSEIDAGSLIPN+ALRAAASAVK EDDRRLFHNAALRKR
Sbjct: 429 GHSFGGLMLRRVIETSRCTICNSEIDAGSLIPNLALRAAASAVKHEDDRRLFHNAALRKR 488

Query: 492 RKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYPFAVNEKVLIKGNRRTPEKFVGKEAVI 551
           RKEMGD MDPMRRLNRENGD+AIDDGIHRGVQYPFA NEKVLIKGNRRTPEKFVGKEAVI
Sbjct: 489 RKEMGDHMDPMRRLNRENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAVI 548

Query: 552 TSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANEDSCPSQPLQHSSS 603
           TSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAN++SCP QPLQHS S
Sbjct: 549 TSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSCPPQPLQHSCS 580

[Close]
BLAST of Cp4.1LG01g06380 vs. NCBI nr
Match: gi|659113959|ref|XP_008456842.1| (PREDICTED: uncharacterized protein LOC103496673 isoform X1 [Cucumis melo])

HSP 1 Score: 1030.4 bits (2663), Expect = 1.3e-297
Identity = 531/592 (89.70%), Postives = 548/592 (92.57%), Query Frame = 1 

Query: 11  QQQSSSAVSPHHISPPPSSLRSPSSVPAAAAAAQSPLALAPLTTHISNSHRESLPPPPPP 70
           QQQSSSAVSPHHI+PPPSSLRSPSS P +A    SPL   PLTTH+SNSHRE        
Sbjct: 8   QQQSSSAVSPHHINPPPSSLRSPSSTPPSA---HSPL---PLTTHVSNSHRE-------- 67

Query: 71  PSDHVAGPVVPVAAAQSAGDSVVTMACPLARVRLSDISPYDGAPGGSYVRAVEALSGSLM 130
           P DHVAGPV+     QSA DS V MACPLARVRLSDI+PYDGAP GSYVRAVEALSGSL 
Sbjct: 68  PCDHVAGPVL-----QSAADSAVAMACPLARVRLSDIAPYDGAPAGSYVRAVEALSGSLT 127

Query: 131 RYNAAVIELENEGAALTRCGLEAARLFLKSRAQSGGKGRGVYMYRAGRAVEDWESCPPCM 190
           RYNAAVIELENE AALTRCGLEAARLF KSRAQSGGKGR VYMYRAGRAVEDW+SCPPCM
Sbjct: 128 RYNAAVIELENEAAALTRCGLEAARLFFKSRAQSGGKGRSVYMYRAGRAVEDWDSCPPCM 187

Query: 191 ADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDSPLPATEVSSSVLVAMHLHNSSLHN 250
           ADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDD+PLPAT+VSSSVLVAM LHNSSLHN
Sbjct: 188 ADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDTPLPATDVSSSVLVAMLLHNSSLHN 247

Query: 251 CKGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCDPNGRWYLADAVLAPGDLLLLTGKAL 310
           CKG  GGGKSAMNVEVEKGLLTL SSDNPGLQVCDPNGRWYLADAVLAPGDLLL+TGKAL
Sbjct: 248 CKGSIGGGKSAMNVEVEKGLLTLFSSDNPGLQVCDPNGRWYLADAVLAPGDLLLITGKAL 307

Query: 311 SHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLMPQTNAILDCSPIAAAGHVIPQRYG 370
           SHATAGLRPAASY+ APDHSLGSNC GRTSLAFRLMPQTNAILDCSPIAAAGHVIPQRYG
Sbjct: 308 SHATAGLRPAASYRVAPDHSLGSNCVGRTSLAFRLMPQTNAILDCSPIAAAGHVIPQRYG 367

Query: 371 PVSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAFLEDAMFVS 430
           PVSVSQFMD LSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAFLEDAMFVS
Sbjct: 368 PVSVSQFMDDLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAFLEDAMFVS 427

Query: 431 CGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIALRAAASAVKQEDDRRLFHNAALRK 490
           CGHSFGGLMLRRVIETSRCT+CNSEIDAGSLIPN+ALRAAASAVK EDDRRLFHNAA+RK
Sbjct: 428 CGHSFGGLMLRRVIETSRCTICNSEIDAGSLIPNLALRAAASAVKHEDDRRLFHNAAVRK 487

Query: 491 RRKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYPFAVNEKVLIKGNRRTPEKFVGKEAV 550
           RRKEMGD MDPMRRLNRENGD+AIDDGIHRGVQYPFA NEKVLIKGNRRTPEKFVGKEAV
Sbjct: 488 RRKEMGDHMDPMRRLNRENGDLAIDDGIHRGVQYPFAENEKVLIKGNRRTPEKFVGKEAV 547

Query: 551 ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANEDSCPSQPLQHSSS 603
           ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPAN++S P QPLQH+ S
Sbjct: 548 ITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANDNSGPPQPLQHTCS 580

[Close]
BLAST of Cp4.1LG01g06380 vs. NCBI nr
Match: gi|590696948|ref|XP_007045305.1| (RING/U-box superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 823.2 bits (2125), Expect = 3.0e-235
Identity = 445/600 (74.17%), Postives = 490/600 (81.67%), Query Frame = 1 

Query: 12  QQSSSAVSPHHISPPP-----SSLRSPSSVPAAAAAAQSPLALAPLTTHISNSHRESLPP 71
           QQ   A  P+   PPP     SSLRSP+  P      QSPL L               P 
Sbjct: 7   QQPQQAPQPNPPPPPPPSSSASSLRSPTPTPT-----QSPLPL---------------PL 66

Query: 72  PPPPPSDHVAGPVVPVAAAQSAGDSVVTMACP---LARVRLSDISPYDGAPGGSYVRAVE 131
           PP  P DHV   VVP++AA  +G+ ++TM      L RVRLSDIS YDGAP GSYVRAVE
Sbjct: 67  PPRQPLDHV---VVPISAANPSGEPLLTMGTTPFLLPRVRLSDISAYDGAPSGSYVRAVE 126

Query: 132 ALSGSLMRYNAAVIELENEGAALTRCGLEAARLFLKSRAQSGGKG-RGVYMYRAGRAVED 191
           +LSGSLMR NAAV+E  NE AAL RCGLEAARL+ +SR  + GKG RGVYMYRAGRA+ED
Sbjct: 127 SLSGSLMRNNAAVVEFGNEDAALMRCGLEAARLYFRSRVNTVGKGSRGVYMYRAGRALED 186

Query: 192 WESCPPCMADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDSPLPATEVSSSVLVAMH 251
           W+S PPCMADIFRCMGKAAR ALCAIARHLRLRSDVFN+LLDD+PLPA EVSSSVLVA +
Sbjct: 187 WDSSPPCMADIFRCMGKAARVALCAIARHLRLRSDVFNHLLDDTPLPANEVSSSVLVATY 246

Query: 252 LHNSSLHNCKGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCDPNGRWYLADAVLAPGDL 311
            H  SL N KG  GGGK  M+ EVEKGLLTLISSD PGLQVCDPNGRWYLAD  LAPGD+
Sbjct: 247 SH-MSLQNGKGAIGGGKPGMSGEVEKGLLTLISSDGPGLQVCDPNGRWYLADGGLAPGDM 306

Query: 312 LLLTGKALSHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLMPQTNAILDCSPIAAAG 371
           LL+TGKALSHATAGLRPAASY+AAP++  G N GGRTSLAFRLMPQ NAILDCSP+AAAG
Sbjct: 307 LLITGKALSHATAGLRPAASYRAAPEYLSGINNGGRTSLAFRLMPQGNAILDCSPVAAAG 366

Query: 372 HVIPQRYGPVSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAF 431
           HVIPQ Y P+SVSQFMD LSAEEDV+C     DN C++RN+ NKE SLRSVLSDPLSGAF
Sbjct: 367 HVIPQSYVPISVSQFMDELSAEEDVVCNR--SDNTCVSRNNFNKEPSLRSVLSDPLSGAF 426

Query: 432 LEDAMFVSCGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIALRAAASAVKQEDDRRL 491
           LEDAM VSCGHSFGGLMLRRV++ SRCTLC+++ID+GSLIPNIALRAAA+AVKQEDDRRL
Sbjct: 427 LEDAMVVSCGHSFGGLMLRRVLDMSRCTLCSADIDSGSLIPNIALRAAAAAVKQEDDRRL 486

Query: 492 FHNAALRKRRKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYPFAVNEKVLIKGNRRTPE 551
           FHNAALRKRRKEMG+Q+DP RR +RENGD+A DDG+HRGVQYPF+VNEKVLIKGNRRTPE
Sbjct: 487 FHNAALRKRRKEMGEQIDPSRRSSRENGDVAADDGLHRGVQYPFSVNEKVLIKGNRRTPE 546

Query: 552 KFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTPANEDSCPSQPLQHSSS 603
           KFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSL KILN  P  ED CPSQP+Q+SSS
Sbjct: 547 KFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLCKILNPQPI-EDRCPSQPIQNSSS 579

[Close]
BLAST of Cp4.1LG01g06380 vs. NCBI nr
Match: gi|1009155485|ref|XP_015895739.1| (PREDICTED: uncharacterized protein LOC107429543 [Ziziphus jujuba])

HSP 1 Score: 811.2 bits (2094), Expect = 1.2e-231
Identity = 447/616 (72.56%), Postives = 499/616 (81.01%), Query Frame = 1 

Query: 11  QQQSSSAVSPHHISPPPSS--------------------LRSPSSVPAAAAAAQSPLALA 70
           QQQ +SA++ H I+PP SS                    LRSP+  P  +    SPL+LA
Sbjct: 7   QQQQNSALASHPINPPSSSATTTTTTTTTSTTTVTATVSLRSPTVTPTQSQQP-SPLSLA 66

Query: 71  PLTTHISNSHRESLPPPPPP--PSDHVAGPVVPVAAAQSAGDSVVTMACPLARVRLSDIS 130
           PL+     SHR+ LPPPPP     DH   P+ P+A A     + VTM CPLARVRLS+I+
Sbjct: 67  PLS-----SHRQPLPPPPPALATGDHAIRPL-PIAVAHPE-QTTVTMTCPLARVRLSEIA 126

Query: 131 PYDGAPGGSYVRAVEALSGSLMRYNAAVIELENEGAALTRCGLEAARLFLKSRAQSG-GK 190
           PYDGAP G+Y+RAVE LSGSLMR+NAAVIEL  + AAL RCGLEAARL+ +SRAQ G GK
Sbjct: 127 PYDGAPVGNYLRAVETLSGSLMRHNAAVIELGCDDAALMRCGLEAARLYFRSRAQQGVGK 186

Query: 191 G-RGVYMYRAGRAVEDWESCPPCMADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDS 250
           G RGVYMYRAGRA+EDW+S PPCMADIFRCMGK +RAALCAIARHLRLRSDVFN+LLDD+
Sbjct: 187 GSRGVYMYRAGRALEDWDSSPPCMADIFRCMGKVSRAALCAIARHLRLRSDVFNHLLDDT 246

Query: 251 PLPATEVSSSVLVAMHLHNSSLHNCKGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCDP 310
           PLPA+EVSSSVLVA + + S   N KG  GGGK  +N EVEKGLLTLISSD+PGLQVCDP
Sbjct: 247 PLPASEVSSSVLVATYSNASQ--NGKGATGGGKQGINGEVEKGLLTLISSDSPGLQVCDP 306

Query: 311 NGRWYLADAVLAPGDLLLLTGKALSHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLM 370
           NGRWYLAD+   PGDLLLLTGKALSHATAGLRPAASY+ APD+S GSN GGR SLAFRLM
Sbjct: 307 NGRWYLADSGSCPGDLLLLTGKALSHATAGLRPAASYRTAPDNS-GSNGGGRISLAFRLM 366

Query: 371 PQTNAILDCSPIAAAGHVIPQRYGPVSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQNK 430
           PQ NA+LDCSPIAAAGHVIPQ Y P+SVSQFMD LSAEED+LC     DNN +ARN  NK
Sbjct: 367 PQGNAVLDCSPIAAAGHVIPQSYVPISVSQFMDDLSAEEDILCNR--SDNNYLARNSLNK 426

Query: 431 EASLRSVLSDPLSGAFLEDAMFVSCGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNIA 490
           E SLRSVLSDPLSGAFLEDAM VSCGHSFGG+MLRRVIE SRCTLC++EI++GSLIPN+A
Sbjct: 427 EPSLRSVLSDPLSGAFLEDAMVVSCGHSFGGVMLRRVIEMSRCTLCSAEIESGSLIPNLA 486

Query: 491 LRAAASAVKQEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYPF 550
           LRAAA+AVK ED RRLFHNAALRKRRKE+GDQMD  RR +RENGD+  DDG  RGVQYPF
Sbjct: 487 LRAAAAAVKHEDSRRLFHNAALRKRRKELGDQMDLSRRSSRENGDVG-DDGFQRGVQYPF 546

Query: 551 AVNEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTTP 603
           +VNEKV+IKGNRRTPEKFVGKEAVITSQCLNGWYLLKI+GTGENVRLQYRSLRKILN TP
Sbjct: 547 SVNEKVVIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIVGTGENVRLQYRSLRKILN-TP 606

[Close]
BLAST of Cp4.1LG01g06380 vs. NCBI nr
Match: gi|1021487696|ref|XP_016186806.1| (PREDICTED: uncharacterized protein LOC107628737 [Arachis ipaensis])

HSP 1 Score: 807.4 bits (2084), Expect = 1.7e-230
Identity = 441/617 (71.47%), Postives = 499/617 (80.88%), Query Frame = 1 

Query: 9   QQQQQSSSAVSPHHISPPPSSLRSPSSVPAAAAAA-------QSPLALAPLTTHISNSHR 68
           QQQQQ+ SA+ P    PPP  + +  S  ++A+AA       +SP + A    H   S  
Sbjct: 6   QQQQQNPSALVPPPQPPPPQHINNAQSSASSASAAATAVTSLRSPSSSATAVGHSQLSSP 65

Query: 69  ESLPPPP-----------PPPSDHVAGPVVPVAAA--QSAGDS-VVTMACPLARVRLSDI 128
            SL P P           P P DH  G VVP+AAA    AGD  VV++  PLARVRLSDI
Sbjct: 66  SSLAPVPIQQRQPLLSSVPLPPDHAVGAVVPIAAALPSGAGDPPVVSVTSPLARVRLSDI 125

Query: 129 SPYDGAPGGSYVRAVEALSGSLMRYNAAVIELENEGAALTRCGLEAARLFLKSRAQSG-G 188
           +PYDGAP G YVRAVEALSGSLMR+NAA+IEL +E +AL RCGLE +RLF +SRAQ G G
Sbjct: 126 APYDGAPAGPYVRAVEALSGSLMRHNAALIELGSEDSALMRCGLEGSRLFFRSRAQLGDG 185

Query: 189 KG-RGVYMYRAGRAVEDWESCPPCMADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDD 248
           KG RGVYMYRAGRA EDW+S PPCMADIFRCMGKA+R+ALCAIARHLRLRSDVFN+LLDD
Sbjct: 186 KGSRGVYMYRAGRAFEDWDSSPPCMADIFRCMGKASRSALCAIARHLRLRSDVFNHLLDD 245

Query: 249 SPLPATEVSSSVLVAMHLHNSSLHNCKGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCD 308
           +PLPA EVSSSVLVA H H SSL N KG  GGGK  +N EVEKGLLTLIS+D PGLQVCD
Sbjct: 246 APLPANEVSSSVLVATHSH-SSLQNGKGAIGGGKPTVNGEVEKGLLTLISTDTPGLQVCD 305

Query: 309 PNGRWYLADAVLAPGDLLLLTGKALSHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRL 368
           PNGRWYLAD+   PGDLLL+TGKALSHATAGLRPAASY+A+PD+ LGSN GGRTSLA+RL
Sbjct: 306 PNGRWYLADSGSGPGDLLLITGKALSHATAGLRPAASYRASPDYFLGSNSGGRTSLAYRL 365

Query: 369 MPQTNAILDCSPIAAAGHVIPQRYGPVSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQN 428
           MPQ NAILDCSPIAAAGHVIPQ Y P+SVSQFMD L+ EE +       DN+ +A+++ N
Sbjct: 366 MPQGNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLATEELIGSR---SDNDDVAQDNVN 425

Query: 429 KEASLRSVLSDPLSGAFLEDAMFVSCGHSFGGLMLRRVIETSRCTLCNSEIDAGSLIPNI 488
           K+ SLRSVLSDPLSGAFLEDAM VSCGHSFGGLMLRRVIETSRCT+CN++++  SLIPN+
Sbjct: 426 KDPSLRSVLSDPLSGAFLEDAMLVSCGHSFGGLMLRRVIETSRCTVCNADVETSSLIPNL 485

Query: 489 ALRAAASAVKQEDDRRLFHNAALRKRRKEMGDQMDPMRRLNRENGDIAIDDGIHRGVQYP 548
           ALRAAA AVK EDDRRLF NAALRKRRKEMGDQ+DP+RR+NRENGD    DG+ RGVQYP
Sbjct: 486 ALRAAAVAVKHEDDRRLFRNAALRKRRKEMGDQIDPIRRVNRENGDFTAADGLQRGVQYP 545

Query: 549 FAVNEKVLIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKILNTT 603
           F+VNEKV+IKGNRRTPEKFVGKEAVITSQCLNGWYLLKII TGENVRLQYRSLRK+LN +
Sbjct: 546 FSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIETGENVRLQYRSLRKLLN-S 605

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g06380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PUB62_ARATH6.7e-3338.34U-box domain-containing protein 62 OS=Arabidopsis thaliana GN=PUB62 PE=2 SV=1[more]
PUB63_ARATH9.7e-3241.62U-box domain-containing protein 63 OS=Arabidopsis thaliana GN=PUB63 PE=2 SV=1[more]
BLAST of Cp4.1LG01g06380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061E9U1_THECC2.1e-23574.17RING/U-box superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_011078 PE=4 S... [more]
B9HI63_POPTR6.0e-23073.59Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s08530g PE=4 SV=2[more]
A0A0B0MK27_GOSAR1.1e-22872.15U-box domain-containing 63-like protein OS=Gossypium arboreum GN=F383_25242 PE=4... [more]
B9HY26_POPTR3.6e-22772.12Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s17820g PE=4 SV=2[more]
A0A0D2MC12_GOSRA1.1e-22671.81Uncharacterized protein OS=Gossypium raimondii GN=B456_002G167300 PE=4 SV=1[more]
BLAST of Cp4.1LG01g06380 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19895.11.1e-19367.23 RING/U-box superfamily protein[more]
AT3G12940.11.1e-3635.24 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily prot... [more]
AT5G05230.13.8e-3438.34 RING/U-box superfamily protein[more]
AT2G40640.15.5e-3341.62 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG01g06380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445330|ref|XP_004140426.1|1.3e-29990.19PREDICTED: uncharacterized protein LOC101206682 [Cucumis sativus][more]
gi|659113959|ref|XP_008456842.1|1.3e-29789.70PREDICTED: uncharacterized protein LOC103496673 isoform X1 [Cucumis melo][more]
gi|590696948|ref|XP_007045305.1|3.0e-23574.17RING/U-box superfamily protein isoform 1 [Theobroma cacao][more]
gi|1009155485|ref|XP_015895739.1|1.2e-23172.56PREDICTED: uncharacterized protein LOC107429543 [Ziziphus jujuba][more]
gi|1021487696|ref|XP_016186806.1|1.7e-23071.47PREDICTED: uncharacterized protein LOC107628737 [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027443IPNS-like
IPR013083Znf_RING/FYVE/PHD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g06380.1Cp4.1LG01g06380.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 411..477
score: 1.
IPR027443Isopenicillin N synthase-likeGENE3DG3DSA:2.60.120.330coord: 184..379
score: 6.1
NoneNo IPR availableunknownCoilCoilcoord: 122..142
scor
NoneNo IPR availablePANTHERPTHR33644FAMILY NOT NAMEDcoord: 51..600
score:
NoneNo IPR availablePANTHERPTHR33644:SF1SUBFAMILY NOT NAMEDcoord: 51..600
score:
NoneNo IPR availableunknownSSF51197Clavaminate synthase-likecoord: 183..380
score: 1.5
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 410..478
score: 4.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g06380CmaCh04G000220Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g06380CmoCh04G000230Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g06380Cla016888Watermelon (97103) v1cpewmB460
Cp4.1LG01g06380CSPI05G12590Wild cucumber (PI 183967)cpecpiB432
Cp4.1LG01g06380Bhi07G000130Wax gourdcpewgoB0564
Cp4.1LG01g06380Carg21978Silver-seed gourdcarcpeB0258
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g06380Cucurbita pepo (Zucchini)cpecpeB374
Cp4.1LG01g06380Cucurbita maxima (Rimu)cmacpeB723
Cp4.1LG01g06380Cucurbita moschata (Rifu)cmocpeB675
Cp4.1LG01g06380Wild cucumber (PI 183967)cpecpiB456
Cp4.1LG01g06380Bottle gourd (USVL1VR-Ls)cpelsiB320
Cp4.1LG01g06380Watermelon (Charleston Gray)cpewcgB361
Cp4.1LG01g06380Watermelon (97103) v1cpewmB468
Cp4.1LG01g06380Melon (DHL92) v3.5.1cpemeB388
Cp4.1LG01g06380Cucumber (Gy14) v2cgybcpeB642
Cp4.1LG01g06380Melon (DHL92) v3.6.1cpemedB434
Cp4.1LG01g06380Silver-seed gourdcarcpeB0939
Cp4.1LG01g06380Cucumber (Chinese Long) v3cpecucB0532