Cp4.1LG01g03740 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g03740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	DUF1442 family protein
Location	Cp4.1LG01 : 1604935 .. 1605664 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGCTGGTCTGCTGAGAATGCCACTGAAGCCTTCCTCAACACCTTCAAATTGGTAAGAACAAACAAAATTACGAACGAATTTTTGAATTTAGTAGTGATTTAACAATCTCGATATGTTTCAGCGCCAAAAAGCTAATGAACCCGACGTCGCGGAGTTCATATCGGCCATGGCTGCTGGAAACAACGCGCAGCTAATGGTAGTGGCATACGAGAGATCCGCAGACCACAAGATTCTAGCCCTGGCCGCTGCCGGCAGTCTGACCGGCGGCCGAGTGGTCTGCATAATTCCACGCCAGGAAGACCTTCATCCATCACGAGCAATTCTCGGGTTCGAACCCCATTACCCGATCGAGTTCGTGGTCGGAGAAGCTGAGAAGCTTCTAGAAACCCATTACAGAGAAGCGGATTTTGTTCTGATCGACTGTAACCTGGACAGCCACGTGGCTGTCATCGAGGGCATTGGATCGAGAAGGAAGTTCGAACGCGCCACCGTGGTGGTGGGGTTTAATGCGATGAGGAAAAGATGTGGAGAGTGGTCCGGTGGATGGAGAACGCAGCTTTTGCCGATTGGAAAAGGGGTGATGGTGATGAAATTGGCGGCGGAGATATCAAAATCCTCCGGCGATGGGAGGAGGAGGCAGTGGGTTGTGAAGGTGGATAAATGCACCGGAGAAGAGCATGTTTTTAGGGTTAGGCTCCCACATCGAAAAGTCATTCAAGCTTGA

mRNA sequence

ATGGGGAGCTGGTCTGCTGAGAATGCCACTGAAGCCTTCCTCAACACCTTCAAATTGCGCCAAAAAGCTAATGAACCCGACGTCGCGGAGTTCATATCGGCCATGGCTGCTGGAAACAACGCGCAGCTAATGGTAGTGGCATACGAGAGATCCGCAGACCACAAGATTCTAGCCCTGGCCGCTGCCGGCAGTCTGACCGGCGGCCGAGTGGTCTGCATAATTCCACGCCAGGAAGACCTTCATCCATCACGAGCAATTCTCGGGTTCGAACCCCATTACCCGATCGAGTTCGTGGTCGGAGAAGCTGAGAAGCTTCTAGAAACCCATTACAGAGAAGCGGATTTTGTTCTGATCGACTGTAACCTGGACAGCCACGTGGCTGTCATCGAGGGCATTGGATCGAGAAGGAAGTTCGAACGCGCCACCGTGGTGGTGGGGTTTAATGCGATGAGGAAAAGATGTGGAGAGTGGTCCGGTGGATGGAGAACGCAGCTTTTGCCGATTGGAAAAGGGGTGATGGTGATGAAATTGGCGGCGGAGATATCAAAATCCTCCGGCGATGGGAGGAGGAGGCAGTGGGTTGTGAAGGTGGATAAATGCACCGGAGAAGAGCATGTTTTTAGGGTTAGGCTCCCACATCGAAAAGTCATTCAAGCTTGA

Coding sequence (CDS)

ATGGGGAGCTGGTCTGCTGAGAATGCCACTGAAGCCTTCCTCAACACCTTCAAATTGCGCCAAAAAGCTAATGAACCCGACGTCGCGGAGTTCATATCGGCCATGGCTGCTGGAAACAACGCGCAGCTAATGGTAGTGGCATACGAGAGATCCGCAGACCACAAGATTCTAGCCCTGGCCGCTGCCGGCAGTCTGACCGGCGGCCGAGTGGTCTGCATAATTCCACGCCAGGAAGACCTTCATCCATCACGAGCAATTCTCGGGTTCGAACCCCATTACCCGATCGAGTTCGTGGTCGGAGAAGCTGAGAAGCTTCTAGAAACCCATTACAGAGAAGCGGATTTTGTTCTGATCGACTGTAACCTGGACAGCCACGTGGCTGTCATCGAGGGCATTGGATCGAGAAGGAAGTTCGAACGCGCCACCGTGGTGGTGGGGTTTAATGCGATGAGGAAAAGATGTGGAGAGTGGTCCGGTGGATGGAGAACGCAGCTTTTGCCGATTGGAAAAGGGGTGATGGTGATGAAATTGGCGGCGGAGATATCAAAATCCTCCGGCGATGGGAGGAGGAGGCAGTGGGTTGTGAAGGTGGATAAATGCACCGGAGAAGAGCATGTTTTTAGGGTTAGGCTCCCACATCGAAAAGTCATTCAAGCTTGA

Protein sequence

MGSWSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALAAAGSLTGGRVVCIIPRQEDLHPSRAILGFEPHYPIEFVVGEAEKLLETHYREADFVLIDCNLDSHVAVIEGIGSRRKFERATVVVGFNAMRKRCGEWSGGWRTQLLPIGKGVMVMKLAAEISKSSGDGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA

Homology

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BLAST of Cp4.1LG01g03740 vs. TrEMBL
Match: A0A0A0L8E9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G176350 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-81
Identity = 168/231 (72.73%), Postives = 182/231 (78.79%), Query Frame = 1


Query: 1   MGSWSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           M SWSAENATEAFLNT K+ QKANEPDV EFISAMAAGNNAQLMVVAYERSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAGSLTGGRVVCIIPRQEDLHPSRAILGFEPH-YPIEFVVGEAEKLLETHYREADFVLID 120
           AA   TGGRVVCII RQEDLH S+AILG   H + IEFVVGEAEKL++T Y E DFVL+D
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLMD 120

Query: 121 CNLDSHVAVIEGIGSRRKFER-ATVVVGFNAMRKRC----GEWSGGWRTQLLPIGKGVMV 180
           CNL  H+AV+E + SRRK ++ AT+VVGFNAM KRC      WS G  T LLPIG GVMV
Sbjct: 121 CNLGCHMAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGSTTHLLPIGMGVMV 180

Query: 181 MKLAAEISKSSGDGRR------RQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
            K+ AE SK+  DGRR       QWVVKVDKCTGEEHVFRVRLP  KVIQA
Sbjct: 181 TKVGAEESKAGEDGRRMRRRRQSQWVVKVDKCTGEEHVFRVRLPQGKVIQA 231

[Close]

BLAST of Cp4.1LG01g03740 vs. TrEMBL
Match: B9I4K5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s14410g PE=4 SV=2)

HSP 1 Score: 248.4 bits (633), Expect = 7.8e-63
Identity = 130/222 (58.56%), Postives = 165/222 (74.32%), Query Frame = 1


Query: 1   MGSWSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           MG WSAENAT A+L T ++ Q+ANEPDVAEFISA+AAGNNAQLMVVA   +A    LAL 
Sbjct: 1   MGYWSAENATNAYLKTLRMGQRANEPDVAEFISALAAGNNAQLMVVACANAAATTSLALV 60

Query: 61  AAGSLTGGRVVCIIPRQEDLHPSRAILGFEPHYPIEFVVGEAEKLLETHYREADFVLIDC 120
           AA   TGGRVVCI+P  ++L  S+ ILG++  + +EFV+GEA+ LL THY EADFVLIDC
Sbjct: 61  AAAHQTGGRVVCILPGHQELQLSKKILGYDACH-VEFVIGEAQSLLLTHYSEADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFERATVVVGFNAMRKRCGEW-SGGWRTQLLPIGKGVMVMKL-- 180
           NL++H A++  + +R+K     VVVG+NA  K  G W SGG +TQLLPIG G++V ++  
Sbjct: 121 NLENHEAILGSVQARKK-RNGAVVVGYNAFSK--GSWRSGGSKTQLLPIGGGLLVTRISA 180

Query: 181 AAEISKSSGDGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
           +A+I+   G G+R  WVVKVD+CTGEEHVFRVR P  K I+A
Sbjct: 181 SAKIADGCGHGKRSHWVVKVDECTGEEHVFRVRFPQGKQIEA 218

[Close]

BLAST of Cp4.1LG01g03740 vs. TrEMBL
Match: A0A061FZH5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014979 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.9e-61
Identity = 128/220 (58.18%), Postives = 159/220 (72.27%), Query Frame = 1


Query: 1   MGSWSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           M  WSAENAT+A+L T K+ QKA EP+VAEF+SA+AAGNNAQLMVVAY  +A+    AL 
Sbjct: 1   MAFWSAENATKAYLKTLKMGQKAKEPNVAEFVSALAAGNNAQLMVVAYATAANSTAFALV 60

Query: 61  AAGSLTGGRVVCIIPRQEDLHPSRAILGFEPHYPIEFVVGEAEKLLETHYREADFVLIDC 120
           AA S TGG VVCI+P  E+L  S+ ILG++  + +EFVVGEA+ LL +HYREADFVLIDC
Sbjct: 61  AAASQTGGHVVCIVPGIEELQLSKKILGYDASH-VEFVVGEAQNLLLSHYREADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFERATVVVGFNAMRKRCGEW-SGGWRTQLLPIGKGVMVMKLAA 180
           NL++H  ++  + +  K     VVVG+NA  K  G W S G RTQLLPIG+G++V ++AA
Sbjct: 121 NLENHEGILRAVEAGTK-RNGAVVVGYNAFSK--GSWRSSGSRTQLLPIGEGLLVTRIAA 180

Query: 181 EISKSSGDGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
           +     G  +R  WVVKVDKCTGEEHVFRVR    K IQA
Sbjct: 181 KAKIDCGFEKRSHWVVKVDKCTGEEHVFRVRFSQGKGIQA 216

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BLAST of Cp4.1LG01g03740 vs. TrEMBL
Match: B9ICV9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s14440g PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-60
Identity = 128/222 (57.66%), Postives = 161/222 (72.52%), Query Frame = 1


Query: 1   MGSWSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           MG WSAENAT+A+L T ++ QKANEPD AEFISA+AAGNNAQLMVVA   +A    +AL 
Sbjct: 1   MGYWSAENATKAYLKTLRMGQKANEPDEAEFISALAAGNNAQLMVVACANAATTTTVALV 60

Query: 61  AAGSLTGGRVVCIIPRQEDLHPSRAILGFEPHYPIEFVVGEAEKLLETHYREADFVLIDC 120
           AA   TGGRVVCI+P  ++L  S+ ILG +  + +EFV+GEA  LL +HY EADFVLIDC
Sbjct: 61  AAAHQTGGRVVCILPGHQELQLSKKILGCDACH-VEFVIGEARSLLLSHYSEADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFERATVVVGFNAMRKRCGEW-SGGWRTQLLPIGKGVMVMKLA- 180
           NL++H  ++  + + RK     V+VG+NA  KR   W SGG +TQLLPIG G++V ++A 
Sbjct: 121 NLENHDGILGAVRAGRK-RNGAVIVGYNAFSKR--SWRSGGSKTQLLPIGGGLLVTRIAT 180

Query: 181 -AEISKSSGDGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
            A+I+   G G+R  WVVKVDKCTGEEHVFRVR P  K I+A
Sbjct: 181 DAKIADGCGCGKRSHWVVKVDKCTGEEHVFRVRFPQGKQIEA 218

[Close]

BLAST of Cp4.1LG01g03740 vs. TrEMBL
Match: A0A067JEY2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26223 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-59
Identity = 124/219 (56.62%), Postives = 158/219 (72.15%), Query Frame = 1


Query: 1   MGSWSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           MG WSAENAT A+L T ++ QKA EPDVAEFISA+AAGNNAQLMVVA    +   +LAL 
Sbjct: 1   MGCWSAENATNAYLKTLRMGQKAKEPDVAEFISALAAGNNAQLMVVACASFSTSTVLALV 60

Query: 61  AAGSLTGGRVVCIIPRQEDLHPSRAILGFEPHYPIEFVVGEAEKLLETHYREADFVLIDC 120
           AA   TGGRVVC++   ++L  SR ILGF+  + +EFVVGEA+ L+ T Y EADFVLIDC
Sbjct: 61  AAAHQTGGRVVCVLSSSKELQISRQILGFDTCH-VEFVVGEAKNLILTQYSEADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFERATVVVGFNAMRKRCGEWSGGWRTQLLPIGKGVMVMKLAAE 180
           NL++H +++  + + RK +   VVVG+NA+ K    WS G +TQLLPIG G++V ++AA 
Sbjct: 121 NLNNHESILGAVQASRK-QNGAVVVGYNALNKG-SWWSTGSKTQLLPIGGGLLVTRIAAG 180

Query: 181 ISKSSGDGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
            +K     +   WVVKVDKCTGEEHVFRVR P RK ++A
Sbjct: 181 CAKIGNLKKSSHWVVKVDKCTGEEHVFRVRHPQRKQVEA 216

[Close]

BLAST of Cp4.1LG01g03740 vs. TAIR10
Match: AT5G62280.1 (AT5G62280.1 Protein of unknown function (DUF1442))

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-45
Identity = 104/233 (44.64%), Postives = 148/233 (63.52%), Query Frame = 1


Query: 1   MGSWSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKIL-AL 60
           M  WSAENAT+A+L+T K  Q+  EP+VAEFISA+AAGN+A+ + VA   +A+  IL AL
Sbjct: 1   MAFWSAENATKAYLSTLKTDQRTKEPNVAEFISALAAGNSARKIAVACAGAANADILVAL 60

Query: 61  AAAGSLTGGRVVCIIPRQEDLHPSRAILGFEPHYPIEFVVGEA--EKLLETHYREADFVL 120
            AA + T G+VVC++   E+L  S+ +L     + I+FVVGE+  + L+  H+ EADFVL
Sbjct: 61  IAAANQTRGQVVCVLRGIEELIISQKMLEPSEIHQIQFVVGESNDDTLINNHFGEADFVL 120

Query: 121 IDCNLDSHVAVIEGIGSRRKFERAT-------VVVGFNAMRKRCGEWSGGWRTQLLPIGK 180
           +DCNL++H  ++  I +  +    T       VVVG+NA  +    +S G +TQ LPIG+
Sbjct: 121 VDCNLENHQEIVGKILNHHEENARTGGGSGVAVVVGYNAFSRGSWRFSDGRKTQFLPIGE 180

Query: 181 GVMV------MKLAAEISKSSGDGRRRQWVVKVDKCTGEEHVFRVRLPHRKVI 218
           G++V       K+  +        R+ +WVVKVDKCTGEEHVFRVR+P  + I
Sbjct: 181 GLLVTRVNDNQKMMMKNHHRDQVMRKSRWVVKVDKCTGEEHVFRVRVPRGEAI 233

[Close]

BLAST of Cp4.1LG01g03740 vs. TAIR10
Match: AT2G45360.1 (AT2G45360.1 Protein of unknown function (DUF1442))

HSP 1 Score: 92.8 bits (229), Expect = 2.8e-19
Identity = 71/220 (32.27%), Postives = 108/220 (49.09%), Query Frame = 1


Query: 4   WSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSAD-HKILALAAA 63
           WS E A++A+++T K  +   E  VAEF+SA AAG NA+L+V  + R       + LA A
Sbjct: 5   WSPETASDAYIDTVKSCKSDKESGVAEFLSATAAGWNARLIVETWSRGDPITTSVGLAVA 64

Query: 64  GSLTGGRVVCIIP-RQEDLHPSRAILGFEPHYPIEFVVGEAEKLLETHYREADFVLIDCN 123
            + TGGR VCI+P  Q  L    A+ GF     +  VVGE+ +     +   DF+++D  
Sbjct: 65  ATHTGGRHVCIVPDEQSKLEYVLAMRGFVTTEVV--VVGESVENTMEEFPGVDFLVVDSK 124

Query: 124 LDSHVAVIEGIGSRRKFERATVVVGFNAMRKRCGEWSGGW-----------RTQLLPIGK 183
               V  +      +   +  V+V  NAM +    +   W           R+  LP+G 
Sbjct: 125 RREFVRTLR---FAKLSNKGAVLVCKNAMHRAISGFK--WHDVLKRGTRVVRSVFLPVGS 184

Query: 184 GVMVMKLAAEISKSSGDGR--RRQWVVKVDKCTGEEHVFR 209
           G+ ++ + A      GD R  R +W+  VD  +GEEH+FR
Sbjct: 185 GLDIVHVGA---TGRGDSRNLRSRWIRHVDHLSGEEHLFR 214

[Close]

BLAST of Cp4.1LG01g03740 vs. TAIR10
Match: AT1G12320.1 (AT1G12320.1 Protein of unknown function (DUF1442))

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-16
Identity = 64/213 (30.05%), Postives = 105/213 (49.30%), Query Frame = 1


Query: 4   WSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAY-ERSADHKILALAAA 63
           WS E A++A+++T K  +    PD AE I+AMAAG N +L+V  + E  A    + L  A
Sbjct: 5   WSPETASKAYIDTVKSCENLETPDAAELIAAMAAGWNVKLIVETWSEGDAIASSIGLNVA 64

Query: 64  GSLTGGRVVCII--PRQEDLHPSRAILGFEP-HYPIEFVVGEAEKLLETHYREADFVLID 123
                 + +CI+   R E  +         P ++P   V  E  K ++   +  DF+++D
Sbjct: 65  SKHANAKHICIVQNSRSESAYLQAIQESSSPLNFPETIVAEEPGKAMK-KLQGVDFLVVD 124

Query: 124 CNLDSHVAVIEGIGSRRKFERATVVV---GFNAMRKRCGEWSGGWRTQLLPIGKGVMVMK 183
                  A    + +     R  VVV   G++++R+   +     RT  LP+  G+ +  
Sbjct: 125 WRNKEFAAA--ALKNAAFGNRGAVVVCRNGYSSLRRVLRD-RKVVRTVTLPVTGGIEIAH 184

Query: 184 LAAEISKSSGDGRRRQWVVKVDKCTGEEHVFRV 210
           +AA  S  SG+ +RR W+  VD+ +GEEHVF +
Sbjct: 185 VAARNSGKSGNNKRR-WITHVDQRSGEEHVFSI 212

[Close]

BLAST of Cp4.1LG01g03740 vs. TAIR10
Match: AT3G60780.1 (AT3G60780.1 Protein of unknown function (DUF1442))

HSP 1 Score: 81.6 bits (200), Expect = 6.4e-16
Identity = 62/219 (28.31%), Postives = 106/219 (48.40%), Query Frame = 1


Query: 4   WSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSAD-HKILALAAA 63
           WS E A+ A+++T +  +   +  VAEF+SA AAG N +L+V  + R       + LA A
Sbjct: 5   WSPETASNAYIHTVRSCKSYRDSSVAEFLSATAAGWNTRLIVETWSRGDPIATSVGLAVA 64

Query: 64  GSLTGGRVVCIIPRQEDLHPSRAIL-GFEPHYPIEFVVGEAEKLLETHYREADFVLIDCN 123
              T GR VCI+P +E      A++ G       E +V ++ + +       DF+++D  
Sbjct: 65  AIHTCGRHVCIVPDEESRSEYEAVMRGAVTSDSTEVMVLDSAEDVVERISGVDFMVVDSK 124

Query: 124 LDSHVAVIEGIGSRRKFERATVVVGFNAMRKRCG--EWSG-------GWRTQLLPIGKGV 183
               V     +G  +  +   V+V  NA  K     +W G         R+  LP+G+G+
Sbjct: 125 RHEFV---NALGLAKTSKMGAVLVCKNATLKSIPGFKWQGLLRRGTRVVRSVFLPVGRGL 184

Query: 184 MVMKLAAEISKSSGDGRRR---QWVVKVDKCTGEEHVFR 209
            ++ + A      G+G R+   +W+  +D  +GEEH+F+
Sbjct: 185 EIVHVGA---SGGGNGLRKIPSRWIKHIDPRSGEEHLFK 217

[Close]

BLAST of Cp4.1LG01g03740 vs. TAIR10
Match: AT1G62840.1 (AT1G62840.1 Protein of unknown function (DUF1442))

HSP 1 Score: 79.3 bits (194), Expect = 3.2e-15
Identity = 63/221 (28.51%), Postives = 104/221 (47.06%), Query Frame = 1


Query: 4   WSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKI-LALAAA 63
           WS E A++A+++T K  +    P  AE ++AMAAG NA L+V  +       I + L  A
Sbjct: 5   WSPETASKAYIDTVKSCENLGTPGAAELVAAMAAGWNANLIVETWSEGETIAISVGLNIA 64

Query: 64  GSLTGGRVVCIIP--RQEDLHPSRAILGFEPHYPIEFVVGEAEKLLE---THYREADFVL 123
              T GR +CI+P  R +  +          + P   ++ E  + LE      +  DF++
Sbjct: 65  SRHTNGRHICIVPNARSQTAYLQAMAEQSCSNLPETIIMNEEGEELEHTMQTLQGIDFLV 124

Query: 124 IDCNLDSHVAVIEGIGSRRKFERATVVVGFNAMRK--RCGEWSGGW------RTQLLPIG 183
           +D +     A +  + +     R  VVV  +  R+   C  W+  +      RT  LP+ 
Sbjct: 125 VDWDQKDFAANV--LRNAVFGSRGAVVVCRSGYRRSTSCFSWTKAFSDRNVVRTVTLPVS 184

Query: 184 KGVMVMKLAAEIS--KSSGDGRRRQWVVKVDKCTGEEHVFR 209
            G+ +  +AA  S  KS  +  +R+W+   D+ +GEEHV R
Sbjct: 185 GGLEIAHVAAARSSGKSDNNSNKRKWIKHFDQRSGEEHVIR 223

[Close]

BLAST of Cp4.1LG01g03740 vs. NCBI nr
Match: gi|659077259|ref|XP_008439110.1| (PREDICTED: uncharacterized protein LOC103484000 [Cucumis melo])

HSP 1 Score: 320.5 bits (820), Expect = 2.3e-84
Identity = 171/231 (74.03%), Postives = 185/231 (80.09%), Query Frame = 1


Query: 1   MGSWSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           M SWSAENATEAFLNT K+ QKANEPDV EFISAMAAGNNAQLMVVAYERSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAGSLTGGRVVCIIPRQEDLHPSRAILGFEPH-YPIEFVVGEAEKLLETHYREADFVLID 120
           AA   TGGRVVCII RQEDLH S+AILG   H + IEFVVGEAEKL++T Y E DFVLID
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLID 120

Query: 121 CNLDSHVAVIEGIGSRRKFER-ATVVVGFNAMRKRC----GEWSGGWRTQLLPIGKGVMV 180
           CNLDSH AV+E + SRRK ++ AT+VVGFNAM KRC      WS G  T LLPIGKGVMV
Sbjct: 121 CNLDSHAAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGLTTHLLPIGKGVMV 180

Query: 181 MKLAAEISKSSGDGRR------RQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
            ++ AE+SK+  DGRR       QWVVKVDKCTGEEHVFRVRLP  KVIQA
Sbjct: 181 TRVGAEVSKAGDDGRRMRRRRQSQWVVKVDKCTGEEHVFRVRLPQGKVIQA 231

[Close]

BLAST of Cp4.1LG01g03740 vs. NCBI nr
Match: gi|449460856|ref|XP_004148160.1| (PREDICTED: uncharacterized protein LOC101217454 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 1.8e-81
Identity = 168/231 (72.73%), Postives = 182/231 (78.79%), Query Frame = 1


Query: 1   MGSWSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           M SWSAENATEAFLNT K+ QKANEPDV EFISAMAAGNNAQLMVVAYERSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAGSLTGGRVVCIIPRQEDLHPSRAILGFEPH-YPIEFVVGEAEKLLETHYREADFVLID 120
           AA   TGGRVVCII RQEDLH S+AILG   H + IEFVVGEAEKL++T Y E DFVL+D
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLMD 120

Query: 121 CNLDSHVAVIEGIGSRRKFER-ATVVVGFNAMRKRC----GEWSGGWRTQLLPIGKGVMV 180
           CNL  H+AV+E + SRRK ++ AT+VVGFNAM KRC      WS G  T LLPIG GVMV
Sbjct: 121 CNLGCHMAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGSTTHLLPIGMGVMV 180

Query: 181 MKLAAEISKSSGDGRR------RQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
            K+ AE SK+  DGRR       QWVVKVDKCTGEEHVFRVRLP  KVIQA
Sbjct: 181 TKVGAEESKAGEDGRRMRRRRQSQWVVKVDKCTGEEHVFRVRLPQGKVIQA 231

[Close]

BLAST of Cp4.1LG01g03740 vs. NCBI nr
Match: gi|566198476|ref|XP_002318277.2| (hypothetical protein POPTR_0012s14410g [Populus trichocarpa])

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-62
Identity = 130/222 (58.56%), Postives = 165/222 (74.32%), Query Frame = 1


Query: 1   MGSWSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           MG WSAENAT A+L T ++ Q+ANEPDVAEFISA+AAGNNAQLMVVA   +A    LAL 
Sbjct: 1   MGYWSAENATNAYLKTLRMGQRANEPDVAEFISALAAGNNAQLMVVACANAAATTSLALV 60

Query: 61  AAGSLTGGRVVCIIPRQEDLHPSRAILGFEPHYPIEFVVGEAEKLLETHYREADFVLIDC 120
           AA   TGGRVVCI+P  ++L  S+ ILG++  + +EFV+GEA+ LL THY EADFVLIDC
Sbjct: 61  AAAHQTGGRVVCILPGHQELQLSKKILGYDACH-VEFVIGEAQSLLLTHYSEADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFERATVVVGFNAMRKRCGEW-SGGWRTQLLPIGKGVMVMKL-- 180
           NL++H A++  + +R+K     VVVG+NA  K  G W SGG +TQLLPIG G++V ++  
Sbjct: 121 NLENHEAILGSVQARKK-RNGAVVVGYNAFSK--GSWRSGGSKTQLLPIGGGLLVTRISA 180

Query: 181 AAEISKSSGDGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
           +A+I+   G G+R  WVVKVD+CTGEEHVFRVR P  K I+A
Sbjct: 181 SAKIADGCGHGKRSHWVVKVDECTGEEHVFRVRFPQGKQIEA 218

[Close]

BLAST of Cp4.1LG01g03740 vs. NCBI nr
Match: gi|590671861|ref|XP_007038449.1| (Uncharacterized protein TCM_014979 [Theobroma cacao])

HSP 1 Score: 243.8 bits (621), Expect = 2.8e-61
Identity = 128/220 (58.18%), Postives = 159/220 (72.27%), Query Frame = 1


Query: 1   MGSWSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           M  WSAENAT+A+L T K+ QKA EP+VAEF+SA+AAGNNAQLMVVAY  +A+    AL 
Sbjct: 1   MAFWSAENATKAYLKTLKMGQKAKEPNVAEFVSALAAGNNAQLMVVAYATAANSTAFALV 60

Query: 61  AAGSLTGGRVVCIIPRQEDLHPSRAILGFEPHYPIEFVVGEAEKLLETHYREADFVLIDC 120
           AA S TGG VVCI+P  E+L  S+ ILG++  + +EFVVGEA+ LL +HYREADFVLIDC
Sbjct: 61  AAASQTGGHVVCIVPGIEELQLSKKILGYDASH-VEFVVGEAQNLLLSHYREADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFERATVVVGFNAMRKRCGEW-SGGWRTQLLPIGKGVMVMKLAA 180
           NL++H  ++  + +  K     VVVG+NA  K  G W S G RTQLLPIG+G++V ++AA
Sbjct: 121 NLENHEGILRAVEAGTK-RNGAVVVGYNAFSK--GSWRSSGSRTQLLPIGEGLLVTRIAA 180

Query: 181 EISKSSGDGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
           +     G  +R  WVVKVDKCTGEEHVFRVR    K IQA
Sbjct: 181 KAKIDCGFEKRSHWVVKVDKCTGEEHVFRVRFSQGKGIQA 216

[Close]

BLAST of Cp4.1LG01g03740 vs. NCBI nr
Match: gi|694398721|ref|XP_009374518.1| (PREDICTED: uncharacterized protein LOC103963426 [Pyrus x bretschneideri])

HSP 1 Score: 243.4 bits (620), Expect = 3.6e-61
Identity = 135/222 (60.81%), Postives = 160/222 (72.07%), Query Frame = 1


Query: 1   MGSWSAENATEAFLNTFKLRQKANEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           M  WSAENAT+A+LNT K+ QKANEPDV EFISA+AAGNNAQLMVVA   +AD K LALA
Sbjct: 1   MACWSAENATKAYLNTLKMGQKANEPDVIEFISALAAGNNAQLMVVACAGAADSKTLALA 60

Query: 61  AAGSLTGGRVVCIIPRQEDLHPSRAILGFEPHYPIEFVVGEAEKLLETHYREADFVLIDC 120
           AA   TGGRVVCI+   E+LH S  +LG    + IEFV+GEA+ LL  +Y+EADFVLIDC
Sbjct: 61  AAAQQTGGRVVCILRSNEELHLSEKVLGVNVCH-IEFVIGEAQNLLLNYYKEADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFERATVVVGFNAMRKRCGEW-SGGWRTQLLPIGKGVMVMKLAA 180
           NL +H AV+  +   RK   AT VVG NA  K  G W SGG RTQLLPIG G++V ++AA
Sbjct: 121 NLKNHEAVLRAVQVGRKHNGAT-VVGHNAFGK--GSWRSGGSRTQLLPIGGGLLVTRIAA 180

Query: 181 EISKSSGDGRRRQWVVKVDKCTGEEHVFRVR--LPHRKVIQA 220
           E   +   G++  WVV+VDKCTGEEHVFRVR  +P  K I A
Sbjct: 181 ENDTAKMIGKKSHWVVRVDKCTGEEHVFRVRSSIPDGKGISA 218

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g03740 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g03740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8E9_CUCSA	1.3e-81	72.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G176350 PE=4 SV=1	[more]
B9I4K5_POPTR	7.8e-63	58.56	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s14410g PE=4 SV=2	[more]
A0A061FZH5_THECC	1.9e-61	58.18	Uncharacterized protein OS=Theobroma cacao GN=TCM_014979 PE=4 SV=1	[more]
B9ICV9_POPTR	1.6e-60	57.66	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s14440g PE=4 SV=1	[more]
A0A067JEY2_JATCU	1.1e-59	56.62	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26223 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g03740 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62280.1	1.7e-45	44.64	Protein of unknown function (DUF1442)	[more]
AT2G45360.1	2.8e-19	32.27	Protein of unknown function (DUF1442)	[more]
AT1G12320.1	3.8e-16	30.05	Protein of unknown function (DUF1442)	[more]
AT3G60780.1	6.4e-16	28.31	Protein of unknown function (DUF1442)	[more]
AT1G62840.1	3.2e-15	28.51	Protein of unknown function (DUF1442)	[more]

BLAST of Cp4.1LG01g03740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077259\|ref\|XP_008439110.1\|	2.3e-84	74.03	PREDICTED: uncharacterized protein LOC103484000 [Cucumis melo]	[more]
gi\|449460856\|ref\|XP_004148160.1\|	1.8e-81	72.73	PREDICTED: uncharacterized protein LOC101217454 [Cucumis sativus]	[more]
gi\|566198476\|ref\|XP_002318277.2\|	1.1e-62	58.56	hypothetical protein POPTR_0012s14410g [Populus trichocarpa]	[more]
gi\|590671861\|ref\|XP_007038449.1\|	2.8e-61	58.18	Uncharacterized protein TCM_014979 [Theobroma cacao]	[more]
gi\|694398721\|ref\|XP_009374518.1\|	3.6e-61	60.81	PREDICTED: uncharacterized protein LOC103963426 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009902	DUF1442

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g03740.1	Cp4.1LG01g03740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009902	Protein of unknown function DUF1442	PFAM	PF07279	DUF1442	coord: 4..208 score: 2.1
None	No IPR available	PANTHER	PTHR33593	FAMILY NOT NAMED	coord: 1..219 score: 7.0
None	No IPR available	PANTHER	PTHR33593:SF3	SUBFAMILY NOT NAMED	coord: 1..219 score: 7.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g03740	Cucsa.251460	Cucumber (Gy14) v1	cgycpeB0681
Cp4.1LG01g03740	CmaCh16G001810	Cucurbita maxima (Rimu)	cmacpeB351
Cp4.1LG01g03740	CmaCh04G003220	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g03740	CmoCh16G001880	Cucurbita moschata (Rifu)	cmocpeB311
Cp4.1LG01g03740	Cla006254	Watermelon (97103) v1	cpewmB437
Cp4.1LG01g03740	Csa3G176350	Cucumber (Chinese Long) v2	cpecuB394
Cp4.1LG01g03740	MELO3C006830	Melon (DHL92) v3.5.1	cpemeB414
Cp4.1LG01g03740	CSPI03G16110	Wild cucumber (PI 183967)	cpecpiB393
Cp4.1LG01g03740	Lsi05G013100	Bottle gourd (USVL1VR-Ls)	cpelsiB367
Cp4.1LG01g03740	MELO3C006830.2	Melon (DHL92) v3.6.1	cpemedB483
Cp4.1LG01g03740	CsaV3_3G016310	Cucumber (Chinese Long) v3	cpecucB0492
Cp4.1LG01g03740	Bhi01G000915	Wax gourd	cpewgoB0520
Cp4.1LG01g03740	CsGy3G016210	Cucumber (Gy14) v2	cgybcpeB370

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g03740	Cp4.1LG14g05710	Cucurbita pepo (Zucchini)	cpecpeB234

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g03740	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g03740	Silver-seed gourd	carcpeB0527
Cp4.1LG01g03740	Cucurbita pepo (Zucchini)	cpecpeB375