CmaCh04G003220 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G003220
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_15
LocationCma_Chr04 : 1590699 .. 1591428 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAGCTGGTCTGCTGAGAATGCCACTGAAGCCTTCCTCAACACCCTCAAATTGGTAAGAACAAACGAAATTACGAACGAGTTTTTGAATTTAGTAGTTATTTAACAATCTCTATATGTTTCAGCGCCAAAAAGCTGATGAACCCGACGTCGCGGAGTTCATATCGGCCATGGCTGCTGGAAACAATGCGCAGCTAATGGTAGTGGCATACGAAAGATCCGCAGACCACAAGATTCTAGCCCTGGCCGCTGCGGGCGGTCTGACCGGCGGCCGAGTGGTCTGCATAATTCCACGCCAGGAAGACCTTCATCCATCACGAGCAATTCTGGGGCTCGAACCCCATTACCCGATCGAGTTCGTGGTCGGAGAAGCTGAGAAGCTTCTCGAAGCCCATTACAGAGAAGCGGATTTTGTTCTGATTGACTGCAACCTGGACAGCCACGTGGCTGTCATCGAGGGCATTGGATCGAGAAGGAAGTTCCAAGGCGCCACCGTGGTGGTGGGGTTTAACGCGATGAGGAAAAGATGTGGAGGGTGGTCCGGCGGATGGAGAACGCAGCTTTTGCCGATTGGAAAAGGGGTGATGGTGATGAAAGTGGCGGCGGAGATATCAAAATCCTCCGGCGAAGGGAGGAGGAGGCAGTGGGTTGTGAAGGTGGATAAATGCACTGGAGAAGAACATGTTTTTAGGGTTAGGCTCCCACATCGAAAAGTCATTCAAGCTTGA

mRNA sequence

ATGGGTAGCTGGTCTGCTGAGAATGCCACTGAAGCCTTCCTCAACACCCTCAAATTGCGCCAAAAAGCTGATGAACCCGACGTCGCGGAGTTCATATCGGCCATGGCTGCTGGAAACAATGCGCAGCTAATGGTAGTGGCATACGAAAGATCCGCAGACCACAAGATTCTAGCCCTGGCCGCTGCGGGCGGTCTGACCGGCGGCCGAGTGGTCTGCATAATTCCACGCCAGGAAGACCTTCATCCATCACGAGCAATTCTGGGGCTCGAACCCCATTACCCGATCGAGTTCGTGGTCGGAGAAGCTGAGAAGCTTCTCGAAGCCCATTACAGAGAAGCGGATTTTGTTCTGATTGACTGCAACCTGGACAGCCACGTGGCTGTCATCGAGGGCATTGGATCGAGAAGGAAGTTCCAAGGCGCCACCGTGGTGGTGGGGTTTAACGCGATGAGGAAAAGATGTGGAGGGTGGTCCGGCGGATGGAGAACGCAGCTTTTGCCGATTGGAAAAGGGGTGATGGTGATGAAAGTGGCGGCGGAGATATCAAAATCCTCCGGCGAAGGGAGGAGGAGGCAGTGGGTTGTGAAGGTGGATAAATGCACTGGAGAAGAACATGTTTTTAGGGTTAGGCTCCCACATCGAAAAGTCATTCAAGCTTGA

Coding sequence (CDS)

ATGGGTAGCTGGTCTGCTGAGAATGCCACTGAAGCCTTCCTCAACACCCTCAAATTGCGCCAAAAAGCTGATGAACCCGACGTCGCGGAGTTCATATCGGCCATGGCTGCTGGAAACAATGCGCAGCTAATGGTAGTGGCATACGAAAGATCCGCAGACCACAAGATTCTAGCCCTGGCCGCTGCGGGCGGTCTGACCGGCGGCCGAGTGGTCTGCATAATTCCACGCCAGGAAGACCTTCATCCATCACGAGCAATTCTGGGGCTCGAACCCCATTACCCGATCGAGTTCGTGGTCGGAGAAGCTGAGAAGCTTCTCGAAGCCCATTACAGAGAAGCGGATTTTGTTCTGATTGACTGCAACCTGGACAGCCACGTGGCTGTCATCGAGGGCATTGGATCGAGAAGGAAGTTCCAAGGCGCCACCGTGGTGGTGGGGTTTAACGCGATGAGGAAAAGATGTGGAGGGTGGTCCGGCGGATGGAGAACGCAGCTTTTGCCGATTGGAAAAGGGGTGATGGTGATGAAAGTGGCGGCGGAGATATCAAAATCCTCCGGCGAAGGGAGGAGGAGGCAGTGGGTTGTGAAGGTGGATAAATGCACTGGAGAAGAACATGTTTTTAGGGTTAGGCTCCCACATCGAAAAGTCATTCAAGCTTGA

Protein sequence

MGSWSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALAAAGGLTGGRVVCIIPRQEDLHPSRAILGLEPHYPIEFVVGEAEKLLEAHYREADFVLIDCNLDSHVAVIEGIGSRRKFQGATVVVGFNAMRKRCGGWSGGWRTQLLPIGKGVMVMKVAAEISKSSGEGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA
Homology
[Close]
BLAST of CmaCh04G003220 vs. TrEMBL
Match: A0A0A0L8E9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G176350 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 4.0e-83
Identity = 171/231 (74.03%), Postives = 185/231 (80.09%), Query Frame = 1 

Query: 1   MGSWSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           M SWSAENATEAFLNTLK+ QKA+EPDV EFISAMAAGNNAQLMVVAYERSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAGGLTGGRVVCIIPRQEDLHPSRAILGLEPH-YPIEFVVGEAEKLLEAHYREADFVLID 120
           AA G TGGRVVCII RQEDLH S+AILG+  H + IEFVVGEAEKL++  Y E DFVL+D
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLMD 120

Query: 121 CNLDSHVAVIEGIGSRRK-FQGATVVVGFNAMRKRC----GGWSGGWRTQLLPIGKGVMV 180
           CNL  H+AV+E + SRRK  QGAT+VVGFNAM KRC     GWS G  T LLPIG GVMV
Sbjct: 121 CNLGCHMAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGSTTHLLPIGMGVMV 180

Query: 181 MKVAAEISKSSGEGRR------RQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
            KV AE SK+  +GRR       QWVVKVDKCTGEEHVFRVRLP  KVIQA
Sbjct: 181 TKVGAEESKAGEDGRRMRRRRQSQWVVKVDKCTGEEHVFRVRLPQGKVIQA 231

[Close]
BLAST of CmaCh04G003220 vs. TrEMBL
Match: B9I4K5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s14410g PE=4 SV=2)

HSP 1 Score: 245.7 bits (626), Expect = 5.1e-62
Identity = 131/222 (59.01%), Postives = 166/222 (74.77%), Query Frame = 1 

Query: 1   MGSWSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           MG WSAENAT A+L TL++ Q+A+EPDVAEFISA+AAGNNAQLMVVA   +A    LAL 
Sbjct: 1   MGYWSAENATNAYLKTLRMGQRANEPDVAEFISALAAGNNAQLMVVACANAAATTSLALV 60

Query: 61  AAGGLTGGRVVCIIPRQEDLHPSRAILGLEPHYPIEFVVGEAEKLLEAHYREADFVLIDC 120
           AA   TGGRVVCI+P  ++L  S+ ILG +  + +EFV+GEA+ LL  HY EADFVLIDC
Sbjct: 61  AAAHQTGGRVVCILPGHQELQLSKKILGYDACH-VEFVIGEAQSLLLTHYSEADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFQGATVVVGFNAMRKRCGGW-SGGWRTQLLPIGKGVMVMKV-- 180
           NL++H A++  + +R+K  GA VVVG+NA  K  G W SGG +TQLLPIG G++V ++  
Sbjct: 121 NLENHEAILGSVQARKKRNGA-VVVGYNAFSK--GSWRSGGSKTQLLPIGGGLLVTRISA 180

Query: 181 AAEISKSSGEGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
           +A+I+   G G+R  WVVKVD+CTGEEHVFRVR P  K I+A
Sbjct: 181 SAKIADGCGHGKRSHWVVKVDECTGEEHVFRVRFPQGKQIEA 218

[Close]
BLAST of CmaCh04G003220 vs. TrEMBL
Match: A0A061FZH5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014979 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.3e-61
Identity = 130/220 (59.09%), Postives = 160/220 (72.73%), Query Frame = 1 

Query: 1   MGSWSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           M  WSAENAT+A+L TLK+ QKA EP+VAEF+SA+AAGNNAQLMVVAY  +A+    AL 
Sbjct: 1   MAFWSAENATKAYLKTLKMGQKAKEPNVAEFVSALAAGNNAQLMVVAYATAANSTAFALV 60

Query: 61  AAGGLTGGRVVCIIPRQEDLHPSRAILGLEPHYPIEFVVGEAEKLLEAHYREADFVLIDC 120
           AA   TGG VVCI+P  E+L  S+ ILG +  + +EFVVGEA+ LL +HYREADFVLIDC
Sbjct: 61  AAASQTGGHVVCIVPGIEELQLSKKILGYDASH-VEFVVGEAQNLLLSHYREADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFQGATVVVGFNAMRKRCGGW-SGGWRTQLLPIGKGVMVMKVAA 180
           NL++H  ++  + +  K  GA VVVG+NA  K  G W S G RTQLLPIG+G++V ++AA
Sbjct: 121 NLENHEGILRAVEAGTKRNGA-VVVGYNAFSK--GSWRSSGSRTQLLPIGEGLLVTRIAA 180

Query: 181 EISKSSGEGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
           +     G  +R  WVVKVDKCTGEEHVFRVR    K IQA
Sbjct: 181 KAKIDCGFEKRSHWVVKVDKCTGEEHVFRVRFSQGKGIQA 216

[Close]
BLAST of CmaCh04G003220 vs. TrEMBL
Match: B9ICV9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s14440g PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 9.6e-61
Identity = 130/222 (58.56%), Postives = 164/222 (73.87%), Query Frame = 1 

Query: 1   MGSWSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           MG WSAENAT+A+L TL++ QKA+EPD AEFISA+AAGNNAQLMVVA   +A    +AL 
Sbjct: 1   MGYWSAENATKAYLKTLRMGQKANEPDEAEFISALAAGNNAQLMVVACANAATTTTVALV 60

Query: 61  AAGGLTGGRVVCIIPRQEDLHPSRAILGLEPHYPIEFVVGEAEKLLEAHYREADFVLIDC 120
           AA   TGGRVVCI+P  ++L  S+ ILG +  + +EFV+GEA  LL +HY EADFVLIDC
Sbjct: 61  AAAHQTGGRVVCILPGHQELQLSKKILGCDACH-VEFVIGEARSLLLSHYSEADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFQGATVVVGFNAMRKRCGGW-SGGWRTQLLPIGKGVMVMKVA- 180
           NL++H  ++  + + RK  GA V+VG+NA  KR   W SGG +TQLLPIG G++V ++A 
Sbjct: 121 NLENHDGILGAVRAGRKRNGA-VIVGYNAFSKR--SWRSGGSKTQLLPIGGGLLVTRIAT 180

Query: 181 -AEISKSSGEGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
            A+I+   G G+R  WVVKVDKCTGEEHVFRVR P  K I+A
Sbjct: 181 DAKIADGCGCGKRSHWVVKVDKCTGEEHVFRVRFPQGKQIEA 218

[Close]
BLAST of CmaCh04G003220 vs. TrEMBL
Match: A0A067JEY2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26223 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 4.0e-59
Identity = 125/219 (57.08%), Postives = 158/219 (72.15%), Query Frame = 1 

Query: 1   MGSWSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           MG WSAENAT A+L TL++ QKA EPDVAEFISA+AAGNNAQLMVVA    +   +LAL 
Sbjct: 1   MGCWSAENATNAYLKTLRMGQKAKEPDVAEFISALAAGNNAQLMVVACASFSTSTVLALV 60

Query: 61  AAGGLTGGRVVCIIPRQEDLHPSRAILGLEPHYPIEFVVGEAEKLLEAHYREADFVLIDC 120
           AA   TGGRVVC++   ++L  SR ILG +  + +EFVVGEA+ L+   Y EADFVLIDC
Sbjct: 61  AAAHQTGGRVVCVLSSSKELQISRQILGFDTCH-VEFVVGEAKNLILTQYSEADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFQGATVVVGFNAMRKRCGGWSGGWRTQLLPIGKGVMVMKVAAE 180
           NL++H +++  + + RK  GA VVVG+NA+ K    WS G +TQLLPIG G++V ++AA 
Sbjct: 121 NLNNHESILGAVQASRKQNGA-VVVGYNALNKG-SWWSTGSKTQLLPIGGGLLVTRIAAG 180

Query: 181 ISKSSGEGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
            +K     +   WVVKVDKCTGEEHVFRVR P RK ++A
Sbjct: 181 CAKIGNLKKSSHWVVKVDKCTGEEHVFRVRHPQRKQVEA 216

[Close]
BLAST of CmaCh04G003220 vs. TAIR10
Match: AT5G62280.1 (AT5G62280.1 Protein of unknown function (DUF1442))

HSP 1 Score: 179.1 bits (453), Expect = 3.0e-45
Identity = 105/233 (45.06%), Postives = 148/233 (63.52%), Query Frame = 1 

Query: 1   MGSWSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKIL-AL 60
           M  WSAENAT+A+L+TLK  Q+  EP+VAEFISA+AAGN+A+ + VA   +A+  IL AL
Sbjct: 1   MAFWSAENATKAYLSTLKTDQRTKEPNVAEFISALAAGNSARKIAVACAGAANADILVAL 60

Query: 61  AAAGGLTGGRVVCIIPRQEDLHPSRAILGLEPHYPIEFVVGEA--EKLLEAHYREADFVL 120
            AA   T G+VVC++   E+L  S+ +L     + I+FVVGE+  + L+  H+ EADFVL
Sbjct: 61  IAAANQTRGQVVCVLRGIEELIISQKMLEPSEIHQIQFVVGESNDDTLINNHFGEADFVL 120

Query: 121 IDCNLDSHVAVIEGIGSRRK-------FQGATVVVGFNAMRKRCGGWSGGWRTQLLPIGK 180
           +DCNL++H  ++  I +  +         G  VVVG+NA  +    +S G +TQ LPIG+
Sbjct: 121 VDCNLENHQEIVGKILNHHEENARTGGGSGVAVVVGYNAFSRGSWRFSDGRKTQFLPIGE 180

Query: 181 GVMV------MKVAAEISKSSGEGRRRQWVVKVDKCTGEEHVFRVRLPHRKVI 218
           G++V       K+  +        R+ +WVVKVDKCTGEEHVFRVR+P  + I
Sbjct: 181 GLLVTRVNDNQKMMMKNHHRDQVMRKSRWVVKVDKCTGEEHVFRVRVPRGEAI 233

[Close]
BLAST of CmaCh04G003220 vs. TAIR10
Match: AT2G45360.1 (AT2G45360.1 Protein of unknown function (DUF1442))

HSP 1 Score: 91.7 bits (226), Expect = 6.2e-19
Identity = 68/218 (31.19%), Postives = 105/218 (48.17%), Query Frame = 1 

Query: 4   WSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSAD-HKILALAAA 63
           WS E A++A+++T+K  +   E  VAEF+SA AAG NA+L+V  + R       + LA A
Sbjct: 5   WSPETASDAYIDTVKSCKSDKESGVAEFLSATAAGWNARLIVETWSRGDPITTSVGLAVA 64

Query: 64  GGLTGGRVVCIIPRQEDLHPSRAILGLEPHYPIE-FVVGEAEKLLEAHYREADFVLIDCN 123
              TGGR VCI+P ++       +L +      E  VVGE+ +     +   DF+++D  
Sbjct: 65  ATHTGGRHVCIVPDEQS--KLEYVLAMRGFVTTEVVVVGESVENTMEEFPGVDFLVVDSK 124

Query: 124 LDSHVAVIEGIGSRRKFQGATVVVGFNAMRKRCGGWSGGW-----------RTQLLPIGK 183
               V  +       K     V+V  NAM +   G+   W           R+  LP+G 
Sbjct: 125 RREFVRTLRFAKLSNK---GAVLVCKNAMHRAISGFK--WHDVLKRGTRVVRSVFLPVGS 184

Query: 184 GVMVMKVAAEISKSSGEGRRRQWVVKVDKCTGEEHVFR 209
           G+ ++ V A   +      R +W+  VD  +GEEH+FR
Sbjct: 185 GLDIVHVGA-TGRGDSRNLRSRWIRHVDHLSGEEHLFR 214

[Close]
BLAST of CmaCh04G003220 vs. TAIR10
Match: AT1G12320.1 (AT1G12320.1 Protein of unknown function (DUF1442))

HSP 1 Score: 82.4 bits (202), Expect = 3.8e-16
Identity = 66/213 (30.99%), Postives = 108/213 (50.70%), Query Frame = 1 

Query: 4   WSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAY-ERSADHKILALAAA 63
           WS E A++A+++T+K  +  + PD AE I+AMAAG N +L+V  + E  A    + L  A
Sbjct: 5   WSPETASKAYIDTVKSCENLETPDAAELIAAMAAGWNVKLIVETWSEGDAIASSIGLNVA 64

Query: 64  GGLTGGRVVCII--PRQEDLHPSRAILGLEP-HYPIEFVVGEAEKLLEAHYREADFVLID 123
                 + +CI+   R E  +         P ++P   V  E  K ++   +  DF+++D
Sbjct: 65  SKHANAKHICIVQNSRSESAYLQAIQESSSPLNFPETIVAEEPGKAMK-KLQGVDFLVVD 124

Query: 124 C-NLDSHVAVIEGIGSRRKFQGATVVV--GFNAMRKRCGGWSGGWRTQLLPIGKGVMVMK 183
             N +   A ++      +  GA VV   G++++R+         RT  LP+  G+ +  
Sbjct: 125 WRNKEFAAAALKNAAFGNR--GAVVVCRNGYSSLRRVLRD-RKVVRTVTLPVTGGIEIAH 184

Query: 184 VAAEISKSSGEGRRRQWVVKVDKCTGEEHVFRV 210
           VAA  S  SG  +RR W+  VD+ +GEEHVF +
Sbjct: 185 VAARNSGKSGNNKRR-WITHVDQRSGEEHVFSI 212

[Close]
BLAST of CmaCh04G003220 vs. TAIR10
Match: AT3G60780.1 (AT3G60780.1 Protein of unknown function (DUF1442))

HSP 1 Score: 81.6 bits (200), Expect = 6.4e-16
Identity = 64/219 (29.22%), Postives = 106/219 (48.40%), Query Frame = 1 

Query: 4   WSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSAD-HKILALAAA 63
           WS E A+ A+++T++  +   +  VAEF+SA AAG N +L+V  + R       + LA A
Sbjct: 5   WSPETASNAYIHTVRSCKSYRDSSVAEFLSATAAGWNTRLIVETWSRGDPIATSVGLAVA 64

Query: 64  GGLTGGRVVCIIPRQEDLHPSRAIL-GLEPHYPIEFVVGEAEKLLEAHYREADFVLIDCN 123
              T GR VCI+P +E      A++ G       E +V ++ + +       DF+++D  
Sbjct: 65  AIHTCGRHVCIVPDEESRSEYEAVMRGAVTSDSTEVMVLDSAEDVVERISGVDFMVVDSK 124

Query: 124 LDSHVAVIEGIGSRRKFQGATVVVGFNAMRKRCGG--WSG-------GWRTQLLPIGKGV 183
               V     +G  +  +   V+V  NA  K   G  W G         R+  LP+G+G+
Sbjct: 125 RHEFV---NALGLAKTSKMGAVLVCKNATLKSIPGFKWQGLLRRGTRVVRSVFLPVGRGL 184

Query: 184 MVMKVAAEISKSSGEGRRR---QWVVKVDKCTGEEHVFR 209
            ++ V A      G G R+   +W+  +D  +GEEH+F+
Sbjct: 185 EIVHVGA---SGGGNGLRKIPSRWIKHIDPRSGEEHLFK 217

[Close]
BLAST of CmaCh04G003220 vs. TAIR10
Match: AT1G62840.1 (AT1G62840.1 Protein of unknown function (DUF1442))

HSP 1 Score: 79.0 bits (193), Expect = 4.2e-15
Identity = 67/223 (30.04%), Postives = 103/223 (46.19%), Query Frame = 1 

Query: 4   WSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKI-LALAAA 63
           WS E A++A+++T+K  +    P  AE ++AMAAG NA L+V  +       I + L  A
Sbjct: 5   WSPETASKAYIDTVKSCENLGTPGAAELVAAMAAGWNANLIVETWSEGETIAISVGLNIA 64

Query: 64  GGLTGGRVVCIIP--RQEDLHPSRAILGLEPHYPIEFVVGEAEKLLE---AHYREADFVL 123
              T GR +CI+P  R +  +          + P   ++ E  + LE      +  DF++
Sbjct: 65  SRHTNGRHICIVPNARSQTAYLQAMAEQSCSNLPETIIMNEEGEELEHTMQTLQGIDFLV 124

Query: 124 IDCNLDSHVAVI---EGIGSRRKFQGATVVVGFNAMRK-RCGGWSGGW------RTQLLP 183
           +D +     A +      GSR    GA VV      R   C  W+  +      RT  LP
Sbjct: 125 VDWDQKDFAANVLRNAVFGSR----GAVVVCRSGYRRSTSCFSWTKAFSDRNVVRTVTLP 184

Query: 184 IGKGVMVMKVAAEIS--KSSGEGRRRQWVVKVDKCTGEEHVFR 209
           +  G+ +  VAA  S  KS     +R+W+   D+ +GEEHV R
Sbjct: 185 VSGGLEIAHVAAARSSGKSDNNSNKRKWIKHFDQRSGEEHVIR 223

[Close]
BLAST of CmaCh04G003220 vs. NCBI nr
Match: gi|659077259|ref|XP_008439110.1| (PREDICTED: uncharacterized protein LOC103484000 [Cucumis melo])

HSP 1 Score: 325.5 bits (833), Expect = 7.2e-86
Identity = 174/231 (75.32%), Postives = 188/231 (81.39%), Query Frame = 1 

Query: 1   MGSWSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           M SWSAENATEAFLNTLK+ QKA+EPDV EFISAMAAGNNAQLMVVAYERSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAGGLTGGRVVCIIPRQEDLHPSRAILGLEPH-YPIEFVVGEAEKLLEAHYREADFVLID 120
           AA G TGGRVVCII RQEDLH S+AILG+  H + IEFVVGEAEKL++  Y E DFVLID
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLID 120

Query: 121 CNLDSHVAVIEGIGSRRK-FQGATVVVGFNAMRKRC----GGWSGGWRTQLLPIGKGVMV 180
           CNLDSH AV+E + SRRK  QGAT+VVGFNAM KRC     GWS G  T LLPIGKGVMV
Sbjct: 121 CNLDSHAAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGLTTHLLPIGKGVMV 180

Query: 181 MKVAAEISKSSGEGRR------RQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
            +V AE+SK+  +GRR       QWVVKVDKCTGEEHVFRVRLP  KVIQA
Sbjct: 181 TRVGAEVSKAGDDGRRMRRRRQSQWVVKVDKCTGEEHVFRVRLPQGKVIQA 231

[Close]
BLAST of CmaCh04G003220 vs. NCBI nr
Match: gi|449460856|ref|XP_004148160.1| (PREDICTED: uncharacterized protein LOC101217454 [Cucumis sativus])

HSP 1 Score: 315.8 bits (808), Expect = 5.7e-83
Identity = 171/231 (74.03%), Postives = 185/231 (80.09%), Query Frame = 1 

Query: 1   MGSWSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           M SWSAENATEAFLNTLK+ QKA+EPDV EFISAMAAGNNAQLMVVAYERSADHKILALA
Sbjct: 1   MASWSAENATEAFLNTLKMGQKANEPDVGEFISAMAAGNNAQLMVVAYERSADHKILALA 60

Query: 61  AAGGLTGGRVVCIIPRQEDLHPSRAILGLEPH-YPIEFVVGEAEKLLEAHYREADFVLID 120
           AA G TGGRVVCII RQEDLH S+AILG+  H + IEFVVGEAEKL++  Y E DFVL+D
Sbjct: 61  AAAGQTGGRVVCIIQRQEDLHVSQAILGMVSHDHGIEFVVGEAEKLIKTQYTEVDFVLMD 120

Query: 121 CNLDSHVAVIEGIGSRRK-FQGATVVVGFNAMRKRC----GGWSGGWRTQLLPIGKGVMV 180
           CNL  H+AV+E + SRRK  QGAT+VVGFNAM KRC     GWS G  T LLPIG GVMV
Sbjct: 121 CNLGCHMAVLEAVRSRRKNDQGATLVVGFNAMSKRCEGGATGWSEGSTTHLLPIGMGVMV 180

Query: 181 MKVAAEISKSSGEGRR------RQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
            KV AE SK+  +GRR       QWVVKVDKCTGEEHVFRVRLP  KVIQA
Sbjct: 181 TKVGAEESKAGEDGRRMRRRRQSQWVVKVDKCTGEEHVFRVRLPQGKVIQA 231

[Close]
BLAST of CmaCh04G003220 vs. NCBI nr
Match: gi|566198476|ref|XP_002318277.2| (hypothetical protein POPTR_0012s14410g [Populus trichocarpa])

HSP 1 Score: 245.7 bits (626), Expect = 7.3e-62
Identity = 131/222 (59.01%), Postives = 166/222 (74.77%), Query Frame = 1 

Query: 1   MGSWSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           MG WSAENAT A+L TL++ Q+A+EPDVAEFISA+AAGNNAQLMVVA   +A    LAL 
Sbjct: 1   MGYWSAENATNAYLKTLRMGQRANEPDVAEFISALAAGNNAQLMVVACANAAATTSLALV 60

Query: 61  AAGGLTGGRVVCIIPRQEDLHPSRAILGLEPHYPIEFVVGEAEKLLEAHYREADFVLIDC 120
           AA   TGGRVVCI+P  ++L  S+ ILG +  + +EFV+GEA+ LL  HY EADFVLIDC
Sbjct: 61  AAAHQTGGRVVCILPGHQELQLSKKILGYDACH-VEFVIGEAQSLLLTHYSEADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFQGATVVVGFNAMRKRCGGW-SGGWRTQLLPIGKGVMVMKV-- 180
           NL++H A++  + +R+K  GA VVVG+NA  K  G W SGG +TQLLPIG G++V ++  
Sbjct: 121 NLENHEAILGSVQARKKRNGA-VVVGYNAFSK--GSWRSGGSKTQLLPIGGGLLVTRISA 180

Query: 181 AAEISKSSGEGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
           +A+I+   G G+R  WVVKVD+CTGEEHVFRVR P  K I+A
Sbjct: 181 SAKIADGCGHGKRSHWVVKVDECTGEEHVFRVRFPQGKQIEA 218

[Close]
BLAST of CmaCh04G003220 vs. NCBI nr
Match: gi|694398721|ref|XP_009374518.1| (PREDICTED: uncharacterized protein LOC103963426 [Pyrus x bretschneideri])

HSP 1 Score: 243.8 bits (621), Expect = 2.8e-61
Identity = 136/222 (61.26%), Postives = 163/222 (73.42%), Query Frame = 1 

Query: 1   MGSWSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           M  WSAENAT+A+LNTLK+ QKA+EPDV EFISA+AAGNNAQLMVVA   +AD K LALA
Sbjct: 1   MACWSAENATKAYLNTLKMGQKANEPDVIEFISALAAGNNAQLMVVACAGAADSKTLALA 60

Query: 61  AAGGLTGGRVVCIIPRQEDLHPSRAILGLEPHYPIEFVVGEAEKLLEAHYREADFVLIDC 120
           AA   TGGRVVCI+   E+LH S  +LG+   + IEFV+GEA+ LL  +Y+EADFVLIDC
Sbjct: 61  AAAQQTGGRVVCILRSNEELHLSEKVLGVNVCH-IEFVIGEAQNLLLNYYKEADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFQGATVVVGFNAMRKRCGGW-SGGWRTQLLPIGKGVMVMKVAA 180
           NL +H AV+  +   RK  GAT VVG NA  K  G W SGG RTQLLPIG G++V ++AA
Sbjct: 121 NLKNHEAVLRAVQVGRKHNGAT-VVGHNAFGK--GSWRSGGSRTQLLPIGGGLLVTRIAA 180

Query: 181 EISKSSGEGRRRQWVVKVDKCTGEEHVFRVR--LPHRKVIQA 220
           E   +   G++  WVV+VDKCTGEEHVFRVR  +P  K I A
Sbjct: 181 ENDTAKMIGKKSHWVVRVDKCTGEEHVFRVRSSIPDGKGISA 218

[Close]
BLAST of CmaCh04G003220 vs. NCBI nr
Match: gi|590671861|ref|XP_007038449.1| (Uncharacterized protein TCM_014979 [Theobroma cacao])

HSP 1 Score: 243.0 bits (619), Expect = 4.7e-61
Identity = 130/220 (59.09%), Postives = 160/220 (72.73%), Query Frame = 1 

Query: 1   MGSWSAENATEAFLNTLKLRQKADEPDVAEFISAMAAGNNAQLMVVAYERSADHKILALA 60
           M  WSAENAT+A+L TLK+ QKA EP+VAEF+SA+AAGNNAQLMVVAY  +A+    AL 
Sbjct: 1   MAFWSAENATKAYLKTLKMGQKAKEPNVAEFVSALAAGNNAQLMVVAYATAANSTAFALV 60

Query: 61  AAGGLTGGRVVCIIPRQEDLHPSRAILGLEPHYPIEFVVGEAEKLLEAHYREADFVLIDC 120
           AA   TGG VVCI+P  E+L  S+ ILG +  + +EFVVGEA+ LL +HYREADFVLIDC
Sbjct: 61  AAASQTGGHVVCIVPGIEELQLSKKILGYDASH-VEFVVGEAQNLLLSHYREADFVLIDC 120

Query: 121 NLDSHVAVIEGIGSRRKFQGATVVVGFNAMRKRCGGW-SGGWRTQLLPIGKGVMVMKVAA 180
           NL++H  ++  + +  K  GA VVVG+NA  K  G W S G RTQLLPIG+G++V ++AA
Sbjct: 121 NLENHEGILRAVEAGTKRNGA-VVVGYNAFSK--GSWRSSGSRTQLLPIGEGLLVTRIAA 180

Query: 181 EISKSSGEGRRRQWVVKVDKCTGEEHVFRVRLPHRKVIQA 220
           +     G  +R  WVVKVDKCTGEEHVFRVR    K IQA
Sbjct: 181 KAKIDCGFEKRSHWVVKVDKCTGEEHVFRVRFSQGKGIQA 216

The following BLAST results are available for this feature:
BLAST of CmaCh04G003220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh04G003220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8E9_CUCSA4.0e-8374.03Uncharacterized protein OS=Cucumis sativus GN=Csa_3G176350 PE=4 SV=1[more]
B9I4K5_POPTR5.1e-6259.01Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s14410g PE=4 SV=2[more]
A0A061FZH5_THECC3.3e-6159.09Uncharacterized protein OS=Theobroma cacao GN=TCM_014979 PE=4 SV=1[more]
B9ICV9_POPTR9.6e-6158.56Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s14440g PE=4 SV=1[more]
A0A067JEY2_JATCU4.0e-5957.08Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26223 PE=4 SV=1[more]
BLAST of CmaCh04G003220 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G62280.13.0e-4545.06 Protein of unknown function (DUF1442)[more]
AT2G45360.16.2e-1931.19 Protein of unknown function (DUF1442)[more]
AT1G12320.13.8e-1630.99 Protein of unknown function (DUF1442)[more]
AT3G60780.16.4e-1629.22 Protein of unknown function (DUF1442)[more]
AT1G62840.14.2e-1530.04 Protein of unknown function (DUF1442)[more]
BLAST of CmaCh04G003220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077259|ref|XP_008439110.1|7.2e-8675.32PREDICTED: uncharacterized protein LOC103484000 [Cucumis melo][more]
gi|449460856|ref|XP_004148160.1|5.7e-8374.03PREDICTED: uncharacterized protein LOC101217454 [Cucumis sativus][more]
gi|566198476|ref|XP_002318277.2|7.3e-6259.01hypothetical protein POPTR_0012s14410g [Populus trichocarpa][more]
gi|694398721|ref|XP_009374518.1|2.8e-6161.26PREDICTED: uncharacterized protein LOC103963426 [Pyrus x bretschneideri][more]
gi|590671861|ref|XP_007038449.1|4.7e-6159.09Uncharacterized protein TCM_014979 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009902DUF1442
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005575 cellular_component
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003674 molecular_function
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G003220.1CmaCh04G003220.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009902Protein of unknown function DUF1442PFAMPF07279DUF1442coord: 4..208
score: 3.5
NoneNo IPR availablePANTHERPTHR33593FAMILY NOT NAMEDcoord: 1..219
score: 3.2
NoneNo IPR availablePANTHERPTHR33593:SF3SUBFAMILY NOT NAMEDcoord: 1..219
score: 3.2