Cp4.1LG01g02680 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g02680
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Unknown protein
Location	Cp4.1LG01 : 2294038 .. 2295764 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGGAGATTCTTCATCCATGTACGCGTTCCACACGCGGCTCTTACCTTACTTTCCATTTAAAACTCCCACAGGAAAAACTAATTTTTTAATAAAAGAATTCCTTAATGTTGAAGGAAAAGATCCACACCGTCAATTGTCCCCATCCTCAACCTCCAATGTCATTACGTGTCAAAATCATAGACCCCTTTGTCAACTCCTTGATTAATTAACAAATTAAGTTGAATTAAGAAGACTGATTAGAGATAAGCCTCCCCGGATTCGCAGCGAACAAACAAAACCCTCTCTCTCGGTAATCTCAACTCTTATTTCTTGATTGTATATATAAATCCGACCAACGCTGTCTTCTCCATCAACTCTTTCTCCTTCATTCGTTTCTCATTCTGTGAATCCGGCCGCTTTTGTCATCGACGTCGTCGTCCGGCGGAGAAGGTCACTGTCTGGTTTGGTTGTGTTCGTCGGGGGATTCATCGTCTGTGTTTGATTTCAAGAGGAAGAAGGGATGAGTTATTATAATCAAGGTCAGCCTCCGGTTGGAGTGCCTCCGCCTCAAGGTATTTCGTCGTTTCTATTGTGTTTCTTTTTGGTGTTTTGGTGGTTTGGAGTTTTGGAGTTGAAACAAGGGGGTTTGTGGTGTGCGATTGTAGATCTGGATGTTCTTTTGTGTTGATTTAGGGTTTTGGTGGTGGTTTTTCAGGTTATCCGCCAGAAGGTTATCCAAAGGATGCTTATCCGCCACAAGGCTATCCTCCTCCCGGATCTTATCCGCCGCAGGGATACCCTCCGCCTTACGCTCCTCAGTACGCGCAACCTCCTCCTCAACAACAGCAGAACAGCGGCCCTGGTTGCATGGAAGGCTGGTAAATCTCTCTCTCTTTTTGACTTCTCTCTCTCTCTCTCTTTGTGTTCATGGCGGCTGAACTCGGATCTGATCTGAATCGGATTCCGATGATTTGGTATCGGAAAAACTGAGTTGATCGGTACGCGTCAGTTGCATCATCGGTGAAGAGTTTAGCCTCCTTTTCATCGGAGACGTTTTTCTTGGAATTATCGCCCCGGTGCAATCCCCAAATTAACCCCCAATTAGCCTCCAAATTACGGTCATTCAAACTTTTCAAATCTCATCGTTCACCCTCTTAAATCCACTAACATTTTCCATTGAACTTTCAATGATTACAAAAATGCTCAAACTACGCTAGAAATTTGGTACAATTCAATCCTTCATATTAGATTGTTATAACTAATTTTGTGTCTAATATGAACTCTGCAGTTTAGCTGCGCTGTGCTGTTGCTGCCTGCTTGACGCCTGCTTCTAAACAGAATCATCCATTTACAGTCATGCTGTGCTTCAAAGTCTAAGAAGATCGATCTCTCAGGAAACTTTTCTCTGAATGCAAAGAAAAAAAAAAAAATGGAAAAACAATCGAGTTGATGATTTAATTACTTGCGTTTTATTATAATATTTTAGTTTAGTGCTTGTTCTTCGTTTCCTCCTCTTCACCTCTCTACATTTTTCATAATAAATAACACCATATCTCCCCAGTTCTCTGTTTTCTCTCTCGCTCTCTCTCTTGGTTTCCTATGATTTATGGGTTTCTTTTTGGATCATCTGTGTTCTTGAGATGCGATTCCAAATTTTACAGTTCATGATATTGGACCAACTCCATTGATATACTTTGTTATAAGTGAAGTTTTTGGGTTTTCTTGTGAATCGCATCGTTTCGATTG

mRNA sequence

CGAGGAGATTCTTCATCCATGTACGCGTTCCACACGCGGCTCTTACCTTACTTTCCATTTAAAACTCCCACAGGAAAAACTAATTTTTTAATAAAAGAATTCCTTAATGTTGAAGGAAAAGATCCACACCGTCAATTGTCCCCATCCTCAACCTCCAATGTCATTACGTGTCAAAATCATAGACCCCTTTGTCAACTCCTTGATTAATTAACAAATTAAGTTGAATTAAGAAGACTGATTAGAGATAAGCCTCCCCGGATTCGCAGCGAACAAACAAAACCCTCTCTCTCGGTAATCTCAACTCTTATTTCTTGATTGTATATATAAATCCGACCAACGCTGTCTTCTCCATCAACTCTTTCTCCTTCATTCGTTTCTCATTCTGTGAATCCGGCCGCTTTTGTCATCGACGTCGTCGTCCGGCGGAGAAGGTCACTGTCTGGTTTGGTTGTGTTCGTCGGGGGATTCATCGTCTGTGTTTGATTTCAAGAGGAAGAAGGGATGAGTTATTATAATCAAGGTCAGCCTCCGGTTGGAGTGCCTCCGCCTCAAGGTTATCCGCCAGAAGGTTATCCAAAGGATGCTTATCCGCCACAAGGCTATCCTCCTCCCGGATCTTATCCGCCGCAGGGATACCCTCCGCCTTACGCTCCTCAGTACGCGCAACCTCCTCCTCAACAACAGCAGAACAGCGGCCCTGGTTGCATGGAAGGCTGTTTAGCTGCGCTGTGCTGTTGCTGCCTGCTTGACGCCTGCTTCTAAACAGAATCATCCATTTACAGTCATGCTGTGCTTCAAAGTCTAAGAAGATCGATCTCTCAGGAAACTTTTCTCTGAATGCAAAGAAAAAAAAAAAAATGGAAAAACAATCGAGTTGATGATTTAATTACTTGCGTTTTATTATAATATTTTAGTTTAGTGCTTGTTCTTCGTTTCCTCCTCTTCACCTCTCTACATTTTTCATAATAAATAACACCATATCTCCCCAGTTCTCTGTTTTCTCTCTCGCTCTCTCTCTTGGTTTCCTATGATTTATGGGTTTCTTTTTGGATCATCTGTGTTCTTGAGATGCGATTCCAAATTTTACAGTTCATGATATTGGACCAACTCCATTGATATACTTTGTTATAAGTGAAGTTTTTGGGTTTTCTTGTGAATCGCATCGTTTCGATTG

Coding sequence (CDS)

ATGAGTTATTATAATCAAGGTCAGCCTCCGGTTGGAGTGCCTCCGCCTCAAGGTTATCCGCCAGAAGGTTATCCAAAGGATGCTTATCCGCCACAAGGCTATCCTCCTCCCGGATCTTATCCGCCGCAGGGATACCCTCCGCCTTACGCTCCTCAGTACGCGCAACCTCCTCCTCAACAACAGCAGAACAGCGGCCCTGGTTGCATGGAAGGCTGTTTAGCTGCGCTGTGCTGTTGCTGCCTGCTTGACGCCTGCTTCTAA

Protein sequence

MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF

Homology

[Close]

BLAST of Cp4.1LG01g02680 vs. Swiss-Prot
Match: CYT1A_ARATH (Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thaliana GN=At2g41420 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 2.9e-30
Identity = 72/100 (72.00%), Postives = 73/100 (73.00%), Query Frame = 1


Query: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPG--------------SYPPQGYP 60
          MS YNQ  PPVGVPPPQGYPPEGYPKDAYPPQGYPP G               YP QGYP
Sbjct: 1  MSQYNQ--PPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYP 60

Query: 61 PPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
          PPYAPQY  PP  QQQ S PG +EGCLAALCCCCLLDACF
Sbjct: 61 PPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of Cp4.1LG01g02680 vs. Swiss-Prot
Match: CYT1B_ARATH (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 6.9e-16
Identity = 57/100 (57.00%), Postives = 61/100 (61.00%), Query Frame = 1


Query: 5   NQGQPPVGVPPPQGYPPEGYPKDAYPP-------QGYPPPGSYPPQGYPPP-YAPQ---- 64
           +Q  P VGVPP   YP EG PKDAYPP       QGYPPP  YP QGYPP  Y PQ    
Sbjct: 2   SQQPPAVGVPPSHAYPAEGPPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYPE 61

Query: 65  --YAQ----PPPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
             Y Q    P  QQQQ   PG +EGC+AALCC C+LDACF
Sbjct: 62  QGYPQQGYPPQQQQQQKHSPGMLEGCIAALCCYCVLDACF 101

[Close]

BLAST of Cp4.1LG01g02680 vs. Swiss-Prot
Match: OPSD_LOLFO (Rhodopsin OS=Loligo forbesi GN=RHO PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.4e-07
Identity = 37/64 (57.81%), Postives = 39/64 (60.94%), Query Frame = 1


Query: 2   SYYNQGQPPVGV--PPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQ 61
           +Y  QG PP G   PPPQGYPP+GYP   YPPQGYPP    PPQG PPP  P     PPQ
Sbjct: 389 AYPPQGYPPQGYPPPPPQGYPPQGYPPQGYPPQGYPP----PPQG-PPPQGPPPQAAPPQ 447

Query: 62  QQQN 64
              N
Sbjct: 449 GVDN 447

[Close]

BLAST of Cp4.1LG01g02680 vs. Swiss-Prot
Match: OPSD_ALLSU (Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.4e-07
Identity = 35/58 (60.34%), Postives = 37/58 (63.79%), Query Frame = 1


Query: 2   SYYNQGQPPVGV--PPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPP 58
           +Y  QG PP G   PPPQGYPP+GYP   YPPQGYPP    PPQG PP   P  A PP
Sbjct: 382 AYPPQGYPPQGYPPPPPQGYPPQGYPPQGYPPQGYPP----PPQGPPPQGPPPQAAPP 435

[Close]

BLAST of Cp4.1LG01g02680 vs. Swiss-Prot
Match: CYTM1_DANRE (Cysteine-rich and transmembrane domain-containing protein 1 OS=Danio rerio GN=cystm1 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 7.6e-07
Identity = 45/98 (45.92%), Postives = 49/98 (50.00%), Query Frame = 1


Query: 3   YYNQGQPPVGVP----PPQGYPPEGYPKDAYPPQGYP-----PPGSYPP----QGYPPPY 62
           Y  QG P  G P    P QGYPP+GYP   YP QGYP     PPG Y      QGYP P 
Sbjct: 18  YPAQGYPAQGYPTQGYPAQGYPPQGYPAQGYPAQGYPNYPPGPPGPYTAQPGYQGYPQPG 77

Query: 63  APQ---YAQPPPQQQQNSG-PGCMEGCLAALCCCCLLD 84
            P    Y     ++   SG   C+  C AALCCCCL D
Sbjct: 78  PPTNTVYVVEQGRRDDQSGEQACLATCWAALCCCCLCD 115

[Close]

BLAST of Cp4.1LG01g02680 vs. TrEMBL
Match: A0A0A0KWC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000680 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.3e-39
Identity = 81/91 (89.01%), Postives = 85/91 (93.41%), Query Frame = 1


Query: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQ 60
          MSYYNQGQPP+GVPPPQGYPPEGYPKDA     YPPQGYPPPG+YPPQGYPPPYAPQYAQ
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
          PPPQQQ +SGPGC+EGCLAALCCCCLLDACF
Sbjct: 61 PPPQQQHSSGPGCLEGCLAALCCCCLLDACF 91

[Close]

BLAST of Cp4.1LG01g02680 vs. TrEMBL
Match: U5G3V1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09010g PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.3e-33
Identity = 78/96 (81.25%), Postives = 79/96 (82.29%), Query Frame = 1


Query: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPG---SYPPQGYPP-------PYA 60
          MSYYNQ QPPVGVPPPQGYPPEGYPKDAYPP GYPP G    YPPQGYPP       PYA
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPQGYPPQGYPPQGYPPPPPYA 60

Query: 61 PQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
          PQY QPP QQQ +SGPGCMEGCLAALCCCCLLDACF
Sbjct: 61 PQYGQPPRQQQGSSGPGCMEGCLAALCCCCLLDACF 96

[Close]

BLAST of Cp4.1LG01g02680 vs. TrEMBL
Match: A0A0K9RZ05_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_012750 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 9.7e-33
Identity = 78/97 (80.41%), Postives = 78/97 (80.41%), Query Frame = 1


Query: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPP----------QGYPPPGSYPPQGYPP-PY 60
          MSYYNQ QPPVGVPPPQGYPPEGYPKDAYPP          QGYPPPG YP QGYPP  Y
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPAQGYPQQGYPPPGGYPQQGYPPQQY 60

Query: 61 APQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
          APQYAQPPPQQQ  S  GCMEGCLAALCCCCLLDACF
Sbjct: 61 APQYAQPPPQQQNQSSVGCMEGCLAALCCCCLLDACF 97

[Close]

BLAST of Cp4.1LG01g02680 vs. TrEMBL
Match: A0A0D2PY39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G230700 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.4e-31
Identity = 76/90 (84.44%), Postives = 79/90 (87.78%), Query Frame = 1


Query: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPP---PGSYPPQGYPPPYAPQY-AQP 60
          MSYYNQ QPPVGVPPPQGYPPEGYPKDAYPP GYPP   P  YPPQGYPPPYAPQY AQP
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPQGYPPQGYPPPYAPQYPAQP 60

Query: 61 PPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
          PPQQQQ++  G +EGCLAALCCCCLLDACF
Sbjct: 61 PPQQQQST--GFLEGCLAALCCCCLLDACF 88

[Close]

BLAST of Cp4.1LG01g02680 vs. TrEMBL
Match: A0A059BBH3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G01204 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.1e-31
Identity = 76/91 (83.52%), Postives = 78/91 (85.71%), Query Frame = 1


Query: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPP---PGSYPPQ-GYPPP-YAPQYAQ 60
          MSYYNQ QPPVGVPPPQGYPPEGYPKDAYPP GYPP   P  YPPQ GYPPP YAPQYAQ
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPAGYPPQPGYPPPQYAPQYAQ 60

Query: 61 PPPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
          PPPQQQQ+   G MEGCLAALCCCCLL+ACF
Sbjct: 61 PPPQQQQSGTTGMMEGCLAALCCCCLLEACF 91

[Close]

BLAST of Cp4.1LG01g02680 vs. TAIR10
Match: AT2G41420.1 (AT2G41420.1 proline-rich family protein)

HSP 1 Score: 132.1 bits (331), Expect = 1.6e-31
Identity = 72/100 (72.00%), Postives = 73/100 (73.00%), Query Frame = 1


Query: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPG--------------SYPPQGYP 60
          MS YNQ  PPVGVPPPQGYPPEGYPKDAYPPQGYPP G               YP QGYP
Sbjct: 1  MSQYNQ--PPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYP 60

Query: 61 PPYAPQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
          PPYAPQY  PP  QQQ S PG +EGCLAALCCCCLLDACF
Sbjct: 61 PPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of Cp4.1LG01g02680 vs. TAIR10
Match: AT5G67600.1 (AT5G67600.1 unknown protein)

HSP 1 Score: 99.4 bits (246), Expect = 1.2e-21
Identity = 60/87 (68.97%), Postives = 66/87 (75.86%), Query Frame = 1


Query: 4  YNQGQPPVGVPPPQGYPP-EGYPKDAYPPQGYPPPG---SYPPQGYPPPYAPQYAQPPPQ 63
          Y+Q Q PVG PPPQGYPP +GYP   YPP GYPPPG    YP QGYPP   PQY+Q  PQ
Sbjct: 2  YHQEQHPVGAPPPQGYPPKDGYPPAGYPPAGYPPPGYAQGYPAQGYPP---PQYSQ-APQ 61

Query: 64 QQQNSGPGCMEGCLAALCCCCLLDACF 87
          Q+QN+  G +EGCLAALCCCCLLDACF
Sbjct: 62 QKQNA--GMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of Cp4.1LG01g02680 vs. TAIR10
Match: AT3G49845.1 (AT3G49845.1 unknown protein)

HSP 1 Score: 79.7 bits (195), Expect = 9.6e-16
Identity = 51/103 (49.51%), Postives = 58/103 (56.31%), Query Frame = 1


Query: 6   QGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPP-----GSYPPQGYPPPYAPQ-------- 65
           +G PP G PPP GYPP  YP+  YPP GYPPP       YP QGYPPP  PQ        
Sbjct: 22  EGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYPAQGYPPPQYPQGHPPQYPY 81

Query: 66  -------YAQPPPQQQQN--SGPGCMEGCLAALCCCCLLDACF 87
                  Y Q PP+ +++     G MEGCLA LCCC LL+ACF
Sbjct: 82  QGPPPPHYGQAPPKNKKDKKDSGGFMEGCLAMLCCCVLLEACF 124

[Close]

BLAST of Cp4.1LG01g02680 vs. TAIR10
Match: AT4G33660.1 (AT4G33660.1 unknown protein)

HSP 1 Score: 49.3 bits (116), Expect = 1.4e-06
Identity = 36/71 (50.70%), Postives = 40/71 (56.34%), Query Frame = 1


Query: 15 PPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPPPYAPQYAQPPPQQQQNSGPGCMEGCLA 74
          P   YP   YP     PQG PPP   PPQ YPPP  P    PPP++      G +EG LA
Sbjct: 4  PKYAYP---YPAPGNYPQGPPPPVGVPPQYYPPPPPPPPPPPPPRKV-----GFLEGLLA 63

Query: 75 ALCCCCLLDAC 86
          ALCCCCL+D C
Sbjct: 64 ALCCCCLVDEC 66

[Close]

BLAST of Cp4.1LG01g02680 vs. TAIR10
Match: AT5G45350.1 (AT5G45350.1 proline-rich family protein)

HSP 1 Score: 48.9 bits (115), Expect = 1.8e-06
Identity = 32/62 (51.61%), Postives = 34/62 (54.84%), Query Frame = 1


Query: 7  GQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYPPQGYPP----------PYAPQYAQP 59
          G PP G PPP  YPP GYP+  YP    PPPG+YPP GYPP          P AP Y   
Sbjct: 15 GYPPAGYPPPGAYPPAGYPQQGYP----PPPGAYPPAGYPPGAYPPAPGGYPPAPGYGGY 72

[Close]

BLAST of Cp4.1LG01g02680 vs. NCBI nr
Match: gi|778689152|ref|XP_011652909.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 7.6e-39
Identity = 81/91 (89.01%), Postives = 85/91 (93.41%), Query Frame = 1


Query: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQ 60
          MSYYNQGQPP+GVPPPQGYPPEGYPKDA     YPPQGYPPPG+YPPQGYPPPYAPQYAQ
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
          PPPQQQ +SGPGC+EGCLAALCCCCLLDACF
Sbjct: 61 PPPQQQHSSGPGCLEGCLAALCCCCLLDACF 91

[Close]

BLAST of Cp4.1LG01g02680 vs. NCBI nr
Match: gi|659108830|ref|XP_008454408.1| (PREDICTED: CYSTM1 family protein A-like [Cucumis melo])

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-37
Identity = 81/91 (89.01%), Postives = 85/91 (93.41%), Query Frame = 1


Query: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQ 60
          MSYYNQGQPP+GVPPPQGYPPEGYPKDA     YPPQGYPPPG+YPPQGYPPPYAPQYAQ
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
          PPP QQQ+SGPGC+EGCLAALCCCCLLDACF
Sbjct: 61 PPP-QQQSSGPGCLEGCLAALCCCCLLDACF 90

[Close]

BLAST of Cp4.1LG01g02680 vs. NCBI nr
Match: gi|657954637|ref|XP_008368761.1| (PREDICTED: CYSTM1 family protein A [Malus domestica])

HSP 1 Score: 153.3 bits (386), Expect = 1.9e-34
Identity = 79/91 (86.81%), Postives = 80/91 (87.91%), Query Frame = 1


Query: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDA-----YPPQGYPPPGSYPPQGYPPPYAPQYAQ 60
          MSYYNQ QPPVGVPPPQGYPPEGYPKDA     YPPQGYPPP  Y PQGYPPPYAPQYAQ
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPVYPPQGYPPPQGY-PQGYPPPYAPQYAQ 60

Query: 61 PPPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
          PPPQQQQ+S  GCMEGCLAALCCCCLLDACF
Sbjct: 61 PPPQQQQSSSSGCMEGCLAALCCCCLLDACF 90

[Close]

BLAST of Cp4.1LG01g02680 vs. NCBI nr
Match: gi|694401186|ref|XP_009375656.1| (PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Pyrus x bretschneideri])

HSP 1 Score: 152.9 bits (385), Expect = 2.5e-34
Identity = 78/90 (86.67%), Postives = 79/90 (87.78%), Query Frame = 1


Query: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPGSYP----PQGYPPPYAPQYAQP 60
          MSYYNQ QPPVGVPPPQGYPPEGYPKDAYPP GYPP G  P    PQGYPPPYAPQYAQP
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPQGYPQGYPPPYAPQYAQP 60

Query: 61 PPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
          PPQQQQ+S  GCMEGCLAALCCCCLLDACF
Sbjct: 61 PPQQQQSSSSGCMEGCLAALCCCCLLDACF 90

[Close]

BLAST of Cp4.1LG01g02680 vs. NCBI nr
Match: gi|566187084|ref|XP_006379164.1| (hypothetical protein POPTR_0009s09010g [Populus trichocarpa])

HSP 1 Score: 148.7 bits (374), Expect = 4.8e-33
Identity = 78/96 (81.25%), Postives = 79/96 (82.29%), Query Frame = 1


Query: 1  MSYYNQGQPPVGVPPPQGYPPEGYPKDAYPPQGYPPPG---SYPPQGYPP-------PYA 60
          MSYYNQ QPPVGVPPPQGYPPEGYPKDAYPP GYPP G    YPPQGYPP       PYA
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPQGYPPQGYPPQGYPPPPPYA 60

Query: 61 PQYAQPPPQQQQNSGPGCMEGCLAALCCCCLLDACF 87
          PQY QPP QQQ +SGPGCMEGCLAALCCCCLLDACF
Sbjct: 61 PQYGQPPRQQQGSSGPGCMEGCLAALCCCCLLDACF 96

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g02680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CYT1A_ARATH	2.9e-30	72.00	Cysteine-rich and transmembrane domain-containing protein A OS=Arabidopsis thali...	[more]
CYT1B_ARATH	6.9e-16	57.00	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
OPSD_LOLFO	3.4e-07	57.81	Rhodopsin OS=Loligo forbesi GN=RHO PE=1 SV=1	[more]
OPSD_ALLSU	3.4e-07	60.34	Rhodopsin (Fragment) OS=Alloteuthis subulata GN=RHO PE=1 SV=1	[more]
CYTM1_DANRE	7.6e-07	45.92	Cysteine-rich and transmembrane domain-containing protein 1 OS=Danio rerio GN=cy...	[more]

BLAST of Cp4.1LG01g02680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWC5_CUCSA	5.3e-39	89.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000680 PE=4 SV=1	[more]
U5G3V1_POPTR	3.3e-33	81.25	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s09010g PE=4 SV=1	[more]
A0A0K9RZ05_SPIOL	9.7e-33	80.41	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_012750 PE=4 SV=1	[more]
A0A0D2PY39_GOSRA	2.4e-31	84.44	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G230700 PE=4 SV=1	[more]
A0A059BBH3_EUCGR	4.1e-31	83.52	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G01204 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g02680 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41420.1	1.6e-31	72.00	proline-rich family protein	[more]
AT5G67600.1	1.2e-21	68.97	unknown protein	[more]
AT3G49845.1	9.6e-16	49.51	unknown protein	[more]
AT4G33660.1	1.4e-06	50.70	unknown protein	[more]
AT5G45350.1	1.8e-06	51.61	proline-rich family protein	[more]

BLAST of Cp4.1LG01g02680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778689152\|ref\|XP_011652909.1\|	7.6e-39	89.01	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
gi\|659108830\|ref\|XP_008454408.1\|	1.9e-37	89.01	PREDICTED: CYSTM1 family protein A-like [Cucumis melo]	[more]
gi\|657954637\|ref\|XP_008368761.1\|	1.9e-34	86.81	PREDICTED: CYSTM1 family protein A [Malus domestica]	[more]
gi\|694401186\|ref\|XP_009375656.1\|	2.5e-34	86.67	PREDICTED: cysteine-rich and transmembrane domain-containing protein A [Pyrus x ...	[more]
gi\|566187084\|ref\|XP_006379164.1\|	4.8e-33	81.25	hypothetical protein POPTR_0009s09010g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g02680.1	Cp4.1LG01g02680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31568	FAMILY NOT NAMED	coord: 1..86 score: 2.1
None	No IPR available	PANTHER	PTHR31568:SF3	CYSTM1 FAMILY PROTEIN A-RELATED	coord: 1..86 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g02680	Carg08116	Silver-seed gourd	carcpeB0527

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g02680	Cucurbita pepo (Zucchini)	cpecpeB234
Cp4.1LG01g02680	Cucurbita pepo (Zucchini)	cpecpeB260
Cp4.1LG01g02680	Cucurbita pepo (Zucchini)	cpecpeB400
Cp4.1LG01g02680	Cucumber (Gy14) v1	cgycpeB0218
Cp4.1LG01g02680	Cucumber (Gy14) v1	cgycpeB0599
Cp4.1LG01g02680	Cucumber (Gy14) v1	cgycpeB0781
Cp4.1LG01g02680	Cucurbita maxima (Rimu)	cmacpeB136
Cp4.1LG01g02680	Cucurbita maxima (Rimu)	cmacpeB351
Cp4.1LG01g02680	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g02680	Cucurbita moschata (Rifu)	cmocpeB114
Cp4.1LG01g02680	Cucurbita moschata (Rifu)	cmocpeB311
Cp4.1LG01g02680	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g02680	Cucurbita moschata (Rifu)	cmocpeB815
Cp4.1LG01g02680	Wild cucumber (PI 183967)	cpecpiB399
Cp4.1LG01g02680	Wild cucumber (PI 183967)	cpecpiB470
Cp4.1LG01g02680	Cucumber (Chinese Long) v2	cpecuB402
Cp4.1LG01g02680	Cucumber (Chinese Long) v2	cpecuB468
Cp4.1LG01g02680	Cucumber (Chinese Long) v2	cpecuB470
Cp4.1LG01g02680	Bottle gourd (USVL1VR-Ls)	cpelsiB325
Cp4.1LG01g02680	Bottle gourd (USVL1VR-Ls)	cpelsiB340
Cp4.1LG01g02680	Watermelon (Charleston Gray)	cpewcgB345
Cp4.1LG01g02680	Watermelon (Charleston Gray)	cpewcgB378
Cp4.1LG01g02680	Watermelon (97103) v1	cpewmB382
Cp4.1LG01g02680	Melon (DHL92) v3.5.1	cpemeB394
Cp4.1LG01g02680	Melon (DHL92) v3.5.1	cpemeB422
Cp4.1LG01g02680	Melon (DHL92) v3.5.1	cpemeB435
Cp4.1LG01g02680	Cucumber (Gy14) v2	cgybcpeB504
Cp4.1LG01g02680	Cucumber (Gy14) v2	cgybcpeB515
Cp4.1LG01g02680	Cucumber (Gy14) v2	cgybcpeB805
Cp4.1LG01g02680	Cucumber (Gy14) v2	cgybcpeB941
Cp4.1LG01g02680	Melon (DHL92) v3.6.1	cpemedB457
Cp4.1LG01g02680	Melon (DHL92) v3.6.1	cpemedB492
Cp4.1LG01g02680	Melon (DHL92) v3.6.1	cpemedB494
Cp4.1LG01g02680	Melon (DHL92) v3.6.1	cpemedB507
Cp4.1LG01g02680	Silver-seed gourd	carcpeB0408
Cp4.1LG01g02680	Silver-seed gourd	carcpeB1032
Cp4.1LG01g02680	Cucumber (Chinese Long) v3	cpecucB0499
Cp4.1LG01g02680	Cucumber (Chinese Long) v3	cpecucB0511
Cp4.1LG01g02680	Cucumber (Chinese Long) v3	cpecucB0576
Cp4.1LG01g02680	Cucumber (Chinese Long) v3	cpecucB0582
Cp4.1LG01g02680	Wax gourd	cpewgoB0477
Cp4.1LG01g02680	Wax gourd	cpewgoB0580