Cp4.1LG01g01580 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g01580
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin-conjugating enzyme E2
LocationCp4.1LG01 : 2980992 .. 2984609 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAGATCGTAATAATTGGAGTGTGCAGAAAGTTGTACCTTCAAACTTCGTTCAGTCTTTATAATCTAGAGAGAGGAAAGCGTCTCCTCTCCAGTCTCTCTCTTCTTCGTCTCCTAAACCCTATCCCGAGCTCTGCAATCCGACCTCAAATGGCGAACAGTAATCTTCCCCGAAGAATCATTAAGGTAAGATCTTCGATGTTCTTCGCGATCTTCCTTGTTTTCCACCCCGATCGGTTTGTCTGGCTTGATTTATTCGTTTGTTGGGGAAATGGTCTCGTTTTGTTGGGTTGAAGTTTTCTTTGTGGGATTTCGATGAATTTTATATGTATTTGTTAGTAGAACTGGGTTATTGATTGATTTTTTCCTACTTTGTGATCAATCGCAGGAAACTCAGCGTCTCCTCAGTGAGCCTGGTGAGTTTTTGATCATTTTAAAGGGTTTGAGTTATTCGGTTCCTGATCTTGTTACTGGGAATTGTTTGTTTTTTTGGGTATTGGGTGTGGTTAGGTTTTATGGTGTGGATTTATTCATCAGATAATTATGAAGTTGAAGTTCATTTTGATTTGATCTTGATCTCTGATAATGTGATTTTAGCCCCTGGGATTAGCGCCTCGCCGTCAGAAGATAACATGCGATATTTTAACGTGATGATTCTTGGCCCGACCCAGTCACCCTATGAAGGTAAATTACTTGACACTACGTTGTGGTTGTGGGAACGTCAAATTATTTTGAAAATTTTGCTATTCCTTTGTTGGTAATATGGATGGTTATAGAACCAACTACGTATTCAAGTGAAGATTGGCTGAAGTGTTACTGATACTGATATGTTTACTCTATGAAAATGGCATGTCGTTAACAGTGAGGATCAACTGTGGGAATATCTTTTACTCATAAAGACCTCAATTTTGTTTAGTTAAGTATTTGACTTCATAACAATATTAATTAAGCAGCATACGTTTGTGCTTGAACATTTCCTTTATGCCCCATGATGCAACAGTAGAATACTACTGTTCTGAGCTGCAAAGCTTGAGAACATACTGGTTATCATGCCACGATTTTTATTCAATAATGTTGATGTATTCCTTCAATTTGAGTTCCTTTTCTCCTTATCCTTGGTCACATTTAATGTTGTTAATCTGTTTCTATATTGTTCTTCGCATATACTTGTGCTGAATTCAATGTACTTTACAGGAGGAGTTTTCAAGTTGGAACTATTTTTGCCTGAAGAATATCCTATGGCTGCTCCCAAGGTAATTTGCAATTCATCATTCCTGGGATATCTTCCAGCACTTATTCGACAAATCCTACTTGCATTTCTTCCACTGTTGTTCTTTTCAAATAATTAGACATGTTTACCTTTTGTTTTGCTTTTCATTAAAAGAAAAAAATTATTAGCAAATGCATCCAATAAAAATCATAGGGCTAATGGGTGAGCACCAAATATTGTTGGATCATTTGAAAACTTCTTATGCCAAATGTGCTGTTAAATTTTCGTATAATTATTGAGCTACTTATGTTTTCTTGTTCTTACTTCTTGATTGTGATTTCATTTATGGATCATGAGATTGTTAAAGCTTCGTTTGATATTGGATTTGCCATAATTACTATTCTTCTTGTCGATTTCGCATCTTCCCCCTGAACATATAACAAAAATTACAAGTCGTCATAATTTATTTTGCATACACGTAGTTTTTAATGTTTCACGAATCTTGACATTTACGTCTACAATACAACTTGATTCTGTTTGATCTATGGAACATGTGGGAATAAATTTATCTTGCTATTACATGAAGAAGTTTTTGGTATTTGAGATCGTCATGGTTGGAGATGGGAGGATAGTTTTTTTTTATGACCTGCTTCATCAGCCGATTGGTTTGGAAGACTGAGAATTTAACATGTTTGGCTGATTCTTTTAAATGTAAGTTTGATCCACAGAGAAAAGAGACGTATCCTAAGAACTTTTTAATCAATATTGAACAATCTTATTTAAGGGTTTAATTTAGTACCCCTTGATGTCCAATAACTGCATATTCTGTATCTAGGTAACCTAGGTGCTCCTATTGGAACATATTTTAACCTGTTTTGAGTGCCTCCACCGCCACCTTTTCCCTTTCATCTGATTTTCTTTTGATCTTCACATTTTTCTTTTTGTGTGATTATTTTTTGTGGAACAGGTTCGATTTCTCACGAAGATTTATCATCCAAATATTGATAAGGTAAGTGTCTACTTGCGTAGTTCTTATTGCCATCCTCACCAACATTCTGCAGAGTTGGTTACTGATGGCGTGAATTTCTGCAATTAAGCTTGGCAGGATATGCCTTGACATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGGTATTATAATGTTTAATGCAATTTTCCAGTGCATCCGCATATTAGCTTTGAACATATTGCATGGTCTTTCACTCATTTAATTCACTCTAGGGATACAGATCTGAAAATTTGACCACCGTGTAATTTATGATAAATTTAACTATATCACTTTGGTTTATATATCACAGTATCCAAGCACTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAATATTGCCAAACATTGGAAAACGAACGAGGCAGAGGCTGTTGAAACAGGTGAGTTGGTCTAATTTATTGCTTTTGTCGAGCTTTTCTTTTTCAACGAGTAGAGGCTGTTGAATCAATGTGGGTCGACACCTAAACTTTAAACTTTATAATTAGTTATTAATAAGAGCTTATCTATTTGATTGTGCTTAGTAAAATAAATTTTAATATAAGCCTAAGATGTCAATTGGATAAGACATAGACCCGAGATTCGAATCTTAAAAAACTTTCAATTTTGTTTATATCTCGACCCACCTAGGTCATAGATTCAATTCAAATTTACGATTAGAGAAATTATTAGTGTCTTTTTTACCGAACCAAAGTGAATAAGTATAAAGAAAGATGGGTATGAAAGGTAGAAAATAATGGAAAATAATAGATTCGTTTGAACTATCTTCTTCACTGTCCAGAAAACAGGTGGGTTACATTATCATTCATCCTGTCTTAGGCTTTTGTTACTCCTGGCTAATGTTATGATTGTCTGGTAATTTTGAATAGAAGAATATAGATGAGATTTTGTTACTCCAGACTAATGTTATTTTTGTCTGGTAATTTTGAATAGAAGAATATAGATATTCTTAGAGTGAACTAGGTTTGATTTAGTGTTAGGGGCTGACACCATTTTGTGATTGGTTCTTATTCTGTCAGCAAAGGAATGGACTCAATTATACGCAAGTGGCGCCTAAAGGGGGAGGAATTACAGAAGCCTTTTTTTAATGTTGTTCGGTTTAATAACATGAATCTAATGTCTATGGTGTACCCATTTGGTGTGGATTTGAATGAAAATTTGGAGGAATTTATAGTGTCAAAAAATCTCTAAAATTGCGTCTGTTTTAGCAGGGAGTGTATGCCCCCCACCATACTTTGTATGATGAATGATTAGATGGATTATATTCTTATTATAACTTCTCCTATTATCTCCTCCCAATCTTCTTCAATCTTTCTCAACCTCTATGGAATAACAACCTTTCTCCTTCCATTTAT

mRNA sequence

AGAAAGATCGTAATAATTGGAGTGTGCAGAAAGTTGTACCTTCAAACTTCGTTCAGTCTTTATAATCTAGAGAGAGGAAAGCGTCTCCTCTCCAGTCTCTCTCTTCTTCGTCTCCTAAACCCTATCCCGAGCTCTGCAATCCGACCTCAAATGGCGAACAGTAATCTTCCCCGAAGAATCATTAAGGAAACTCAGCGTCTCCTCAGTGAGCCTGCCCCTGGGATTAGCGCCTCGCCGTCAGAAGATAACATGCGATATTTTAACGTGATGATTCTTGGCCCGACCCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAACTATTTTTGCCTGAAGAATATCCTATGGCTGCTCCCAAGGTTCGATTTCTCACGAAGATTTATCATCCAAATATTGATAAGCTTGGCAGGATATGCCTTGACATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGTATCCAAGCACTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAATATTGCCAAACATTGGAAAACGAACGAGGCAGAGGCTGTTGAAACAGCAAAGGAATGGACTCAATTATACGCAAGTGGCGCCTAAAGGGGGAGGAATTACAGAAGCCTTTTTTTAATGTTGTTCGGTTTAATAACATGAATCTAATGTCTATGGTGTACCCATTTGGTGTGGATTTGAATGAAAATTTGGAGGAATTTATAGTGTCAAAAAATCTCTAAAATTGCGTCTGTTTTAGCAGGGAGTGTATGCCCCCCACCATACTTTGTATGATGAATGATTAGATGGATTATATTCTTATTATAACTTCTCCTATTATCTCCTCCCAATCTTCTTCAATCTTTCTCAACCTCTATGGAATAACAACCTTTCTCCTTCCATTTAT

Coding sequence (CDS)

ATGGCGAACAGTAATCTTCCCCGAAGAATCATTAAGGAAACTCAGCGTCTCCTCAGTGAGCCTGCCCCTGGGATTAGCGCCTCGCCGTCAGAAGATAACATGCGATATTTTAACGTGATGATTCTTGGCCCGACCCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAACTATTTTTGCCTGAAGAATATCCTATGGCTGCTCCCAAGGTTCGATTTCTCACGAAGATTTATCATCCAAATATTGATAAGCTTGGCAGGATATGCCTTGACATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGTATCCAAGCACTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAATATTGCCAAACATTGGAAAACGAACGAGGCAGAGGCTGTTGAAACAGCAAAGGAATGGACTCAATTATACGCAAGTGGCGCCTAA

Protein sequence

MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTQLYASGA
Homology
[Close]
BLAST of Cp4.1LG01g01580 vs. Swiss-Prot
Match: UBC35_ARATH (Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.2e-82
Identity = 150/153 (98.04%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DPLSENIAKHWK+NEAEAV+TAKEWT+LYASGA
Sbjct: 121 DPLSENIAKHWKSNEAEAVDTAKEWTRLYASGA 153

[Close]
BLAST of Cp4.1LG01g01580 vs. Swiss-Prot
Match: UBC36_ARATH (Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.5e-82
Identity = 150/153 (98.04%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DPLSENIAKHWK+NEAEAVETAKEWT+LYASGA
Sbjct: 121 DPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 153

[Close]
BLAST of Cp4.1LG01g01580 vs. Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 9.0e-67
Identity = 118/147 (80.27%), Postives = 133/147 (90.48%), Query Frame = 1 

Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEE
Sbjct: 2   AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEE 61

Query: 64  YPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
           YPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL
Sbjct: 62  YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121

Query: 124 SENIAKHWKTNEAEAVETAKEWTQLYA 151
           + ++A+ WKTNEA+A+ETA+ WT+LYA
Sbjct: 122 ANDVAEQWKTNEAQAIETARAWTRLYA 148

[Close]
BLAST of Cp4.1LG01g01580 vs. Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 9.0e-67
Identity = 118/147 (80.27%), Postives = 133/147 (90.48%), Query Frame = 1 

Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEE
Sbjct: 2   AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEE 61

Query: 64  YPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
           YPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL
Sbjct: 62  YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121

Query: 124 SENIAKHWKTNEAEAVETAKEWTQLYA 151
           + ++A+ WKTNEA+A+ETA+ WT+LYA
Sbjct: 122 ANDVAEQWKTNEAQAIETARAWTRLYA 148

[Close]
BLAST of Cp4.1LG01g01580 vs. Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 9.0e-67
Identity = 118/147 (80.27%), Postives = 133/147 (90.48%), Query Frame = 1 

Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEE
Sbjct: 2   AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEE 61

Query: 64  YPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
           YPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL
Sbjct: 62  YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121

Query: 124 SENIAKHWKTNEAEAVETAKEWTQLYA 151
           + ++A+ WKTNEA+A+ETA+ WT+LYA
Sbjct: 122 ANDVAEQWKTNEAQAIETARAWTRLYA 148

[Close]
BLAST of Cp4.1LG01g01580 vs. TrEMBL
Match: F8RWT2_HEVBR (Protein binding/ubiquitin-protein ligase 2 OS=Hevea brasiliensis GN=UBE2N1 PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.0e-81
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DPLSENIAKHWKTNEAEAVETAKEWT+LYASGA
Sbjct: 121 DPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 153

[Close]
BLAST of Cp4.1LG01g01580 vs. TrEMBL
Match: A0A0B0PN86_GOSAR (Ubiquitin-conjugating enzyme E2 35-like protein OS=Gossypium arboreum GN=F383_06290 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.0e-81
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DPLSENIAKHWKTNEAEAVETAKEWT+LYASGA
Sbjct: 121 DPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 153

[Close]
BLAST of Cp4.1LG01g01580 vs. TrEMBL
Match: E2CW93_CUCSA (Putative ubiquitin-conjugating enzyme OS=Cucumis sativus GN=UBC13 PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.0e-81
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DPLSENIAKHWKTNEAEAVETAKEWT+LYASGA
Sbjct: 121 DPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 153

[Close]
BLAST of Cp4.1LG01g01580 vs. TrEMBL
Match: A0A061F888_THECC (Ubiquitin-conjugating enzyme 36 isoform 1 OS=Theobroma cacao GN=TCM_031769 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.0e-81
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 52  MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 111

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 112 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 171

Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DPLSENIAKHWKTNEAEAVETAKEWT+LYASGA
Sbjct: 172 DPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 204

[Close]
BLAST of Cp4.1LG01g01580 vs. TrEMBL
Match: B9SBK8_RICCO (Ubiquitin-conjugating enzyme E2 N, putative OS=Ricinus communis GN=RCOM_0341640 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.0e-81
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DPLSENIAKHWKTNEAEAVETAKEWT+LYASGA
Sbjct: 121 DPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 153

[Close]
BLAST of Cp4.1LG01g01580 vs. TAIR10
Match: AT1G78870.1 (AT1G78870.1 ubiquitin-conjugating enzyme 35)

HSP 1 Score: 302.4 bits (773), Expect = 1.6e-82
Identity = 150/154 (97.40%), Postives = 153/154 (99.35%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEG-GVFKLELF 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEG GVFKLELF
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGRGVFKLELF 60

Query: 61  LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 120
           LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP
Sbjct: 61  LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 120

Query: 121 DDPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DDPLSENIAKHWK+NEAEAV+TAKEWT+LYASGA
Sbjct: 121 DDPLSENIAKHWKSNEAEAVDTAKEWTRLYASGA 154

[Close]
BLAST of Cp4.1LG01g01580 vs. TAIR10
Match: AT1G16890.3 (AT1G16890.3 ubiquitin-conjugating enzyme 36)

HSP 1 Score: 297.7 bits (761), Expect = 4.0e-81
Identity = 149/162 (91.98%), Postives = 153/162 (94.44%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSE---------PAPGISASPSEDNMRYFNVMILGPTQSPYEG 60
           MANSNLPRRIIKETQRLLSE         P+PGISASPSE+NMRYFNVMILGPTQSPYEG
Sbjct: 1   MANSNLPRRIIKETQRLLSEPGNFITSFDPSPGISASPSEENMRYFNVMILGPTQSPYEG 60

Query: 61  GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ 120
           GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ
Sbjct: 61  GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ 120

Query: 121 ALLSAPNPDDPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           ALLSAPNPDDPLSENIAKHWK+NEAEAVETAKEWT+LYASGA
Sbjct: 121 ALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 162

[Close]
BLAST of Cp4.1LG01g01580 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 155.2 bits (391), Expect = 3.2e-38
Identity = 74/145 (51.03%), Postives = 98/145 (67.59%), Query Frame = 1 

Query: 8   RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
           +RI+KE + L  +P    SA P  ++M ++   I+GP +SPY GGVF + +  P +YP  
Sbjct: 4   KRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFK 63

Query: 68  APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
            PKV F TK+YHPNI+  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL   I
Sbjct: 64  PPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123

Query: 128 AKHWKTNEAEAVETAKEWTQLYASG 153
           A  +KT+ ++   TA+ WTQ YA G
Sbjct: 124 AHMYKTDRSKYESTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG01g01580 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 153.3 bits (386), Expect = 1.2e-37
Identity = 73/145 (50.34%), Postives = 99/145 (68.28%), Query Frame = 1 

Query: 8   RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
           +RI+KE + L  +P    SA P  ++M ++   I+GP++SPY GGVF + +  P +YP  
Sbjct: 4   KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 63

Query: 68  APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
            PKV F TK++HPNI+  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL   I
Sbjct: 64  PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123

Query: 128 AKHWKTNEAEAVETAKEWTQLYASG 153
           A  +KT++ +   TA+ WTQ YA G
Sbjct: 124 AHMYKTDKNKYESTARSWTQKYAMG 148

[Close]
BLAST of Cp4.1LG01g01580 vs. TAIR10
Match: AT4G27960.2 (AT4G27960.2 ubiquitin conjugating enzyme 9)

HSP 1 Score: 152.5 bits (384), Expect = 2.1e-37
Identity = 73/145 (50.34%), Postives = 98/145 (67.59%), Query Frame = 1 

Query: 8   RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
           +RI+KE + L  +P    SA P  ++M ++   I+GP+ SPY GGVF + +  P +YP  
Sbjct: 34  KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFK 93

Query: 68  APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
            PKV F TK++HPNI+  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL   I
Sbjct: 94  PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 153

Query: 128 AKHWKTNEAEAVETAKEWTQLYASG 153
           A  +KT++ +   TA+ WTQ YA G
Sbjct: 154 AHMYKTDKNKYESTARTWTQKYAMG 178

[Close]
BLAST of Cp4.1LG01g01580 vs. NCBI nr
Match: gi|590610102|ref|XP_007021721.1| (Ubiquitin-conjugating enzyme 36 isoform 1 [Theobroma cacao])

HSP 1 Score: 309.7 bits (792), Expect = 2.9e-81
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 52  MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 111

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 112 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 171

Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DPLSENIAKHWKTNEAEAVETAKEWT+LYASGA
Sbjct: 172 DPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 204

[Close]
BLAST of Cp4.1LG01g01580 vs. NCBI nr
Match: gi|525507031|ref|NP_001267560.1| (ubiquitin-conjugating enzyme E2 35-like [Cucumis sativus])

HSP 1 Score: 309.7 bits (792), Expect = 2.9e-81
Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DPLSENIAKHWKTNEAEAVETAKEWT+LYASGA
Sbjct: 121 DPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 153

[Close]
BLAST of Cp4.1LG01g01580 vs. NCBI nr
Match: gi|116787013|gb|ABK24341.1| (unknown [Picea sitchensis])

HSP 1 Score: 308.5 bits (789), Expect = 6.4e-81
Identity = 151/153 (98.69%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MAN+NLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANANLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DPLSENIAKHWKTNEAEAVETAKEWT+LYASGA
Sbjct: 121 DPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 153

[Close]
BLAST of Cp4.1LG01g01580 vs. NCBI nr
Match: gi|359807381|ref|NP_001241639.1| (uncharacterized protein LOC100805631 [Glycine max])

HSP 1 Score: 308.1 bits (788), Expect = 8.4e-81
Identity = 151/153 (98.69%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DPLSENIAKHWK+NEAEAVETAKEWT+LYASGA
Sbjct: 121 DPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 153

[Close]
BLAST of Cp4.1LG01g01580 vs. NCBI nr
Match: gi|720074741|ref|XP_010279114.1| (PREDICTED: ubiquitin-conjugating enzyme E2 36 [Nelumbo nucifera])

HSP 1 Score: 308.1 bits (788), Expect = 8.4e-81
Identity = 151/153 (98.69%), Postives = 153/153 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETAKEWTQLYASGA 154
           DPLSENIAKHWKTNEAEAVETAKEWT+LYASGA
Sbjct: 121 DPLSENIAKHWKTNEAEAVETAKEWTRLYASGA 153

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g01580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBC35_ARATH1.2e-8298.04Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1[more]
UBC36_ARATH1.5e-8298.04Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1[more]
UBE2N_PONAB9.0e-6780.27Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1[more]
UBE2N_MOUSE9.0e-6780.27Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1[more]
UBE2N_HUMAN9.0e-6780.27Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1[more]
BLAST of Cp4.1LG01g01580 vs. TrEMBL
Match NameE-valueIdentityDescription
F8RWT2_HEVBR2.0e-8199.35Protein binding/ubiquitin-protein ligase 2 OS=Hevea brasiliensis GN=UBE2N1 PE=2 ... [more]
A0A0B0PN86_GOSAR2.0e-8199.35Ubiquitin-conjugating enzyme E2 35-like protein OS=Gossypium arboreum GN=F383_06... [more]
E2CW93_CUCSA2.0e-8199.35Putative ubiquitin-conjugating enzyme OS=Cucumis sativus GN=UBC13 PE=2 SV=1[more]
A0A061F888_THECC2.0e-8199.35Ubiquitin-conjugating enzyme 36 isoform 1 OS=Theobroma cacao GN=TCM_031769 PE=3 ... [more]
B9SBK8_RICCO2.0e-8199.35Ubiquitin-conjugating enzyme E2 N, putative OS=Ricinus communis GN=RCOM_0341640 ... [more]
BLAST of Cp4.1LG01g01580 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G78870.11.6e-8297.40 ubiquitin-conjugating enzyme 35[more]
AT1G16890.34.0e-8191.98 ubiquitin-conjugating enzyme 36[more]
AT3G08690.13.2e-3851.03 ubiquitin-conjugating enzyme 11[more]
AT5G53300.11.2e-3750.34 ubiquitin-conjugating enzyme 10[more]
AT4G27960.22.1e-3750.34 ubiquitin conjugating enzyme 9[more]
BLAST of Cp4.1LG01g01580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|590610102|ref|XP_007021721.1|2.9e-8199.35Ubiquitin-conjugating enzyme 36 isoform 1 [Theobroma cacao][more]
gi|525507031|ref|NP_001267560.1|2.9e-8199.35ubiquitin-conjugating enzyme E2 35-like [Cucumis sativus][more]
gi|116787013|gb|ABK24341.1|6.4e-8198.69unknown [Picea sitchensis][more]
gi|359807381|ref|NP_001241639.1|8.4e-8198.69uncharacterized protein LOC100805631 [Glycine max][more]
gi|720074741|ref|XP_010279114.1|8.4e-8198.69PREDICTED: ubiquitin-conjugating enzyme E2 36 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023313UBQ-conjugating_AS
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g01580.1Cp4.1LG01g01580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 9..145
score: 4.9
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 8..140
score: 42
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 2..150
score: 4.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 7..151
score: 7.04
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 78..93
scor
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 1..152
score: 1.1E
NoneNo IPR availablePANTHERPTHR24067:SF159UBIQUITIN-CONJUGATING ENZYME E2 36coord: 1..152
score: 1.1E
NoneNo IPR availableSMARTSM00212ubc_7coord: 8..151
score: 6.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g01580CmaCh04G005730Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g01580CmoCh04G006130Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g01580Carg13164Silver-seed gourdcarcpeB0061
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g01580Cucumber (Gy14) v2cgybcpeB512
Cp4.1LG01g01580Silver-seed gourdcarcpeB0927
Cp4.1LG01g01580Cucumber (Chinese Long) v3cpecucB0506
Cp4.1LG01g01580Cucurbita pepo (Zucchini)cpecpeB234
Cp4.1LG01g01580Cucumber (Gy14) v1cgycpeB0717
Cp4.1LG01g01580Cucurbita maxima (Rimu)cmacpeB351
Cp4.1LG01g01580Cucurbita moschata (Rifu)cmocpeB311
Cp4.1LG01g01580Wild cucumber (PI 183967)cpecpiB408
Cp4.1LG01g01580Cucumber (Chinese Long) v2cpecuB409
Cp4.1LG01g01580Watermelon (Charleston Gray)cpewcgB406
Cp4.1LG01g01580Melon (DHL92) v3.5.1cpemeB418