CmaCh04G005730 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G005730
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUbiquitin-conjugating enzyme 13
LocationCma_Chr04 : 2920426 .. 2923112 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTATTGGGACAGAAAGATCGTAATAATTGGAGTGTGCAGAAAGTTGTACCTTCAAACTTCGTTCAAGTATTTATAATCTAGAGAGAGGAAAGCGTCTCCTCTCCAATCTCTCTCTTCTTCGTTTCCTAAACCCTATCCCAAGCTCTGCAATCCGACCTCAAATGGCGAACAGTAATCTTCCCCGAAGAATCATTAAGGTAAGATCTTTGATCTTCTTCGCGATCTTCCTTGTTTTCCACCCCGATCGGTTTGTCTGGCTTGATTTATTCGTTTGTTGGGGAAATGGTCTCGTTTTGTTGGGTTGAAGTTTTCTTTGTGGGATTTCGATGAATTTTGTATGTATTTTGTTAGTAGAACTGGGTTATTGATTGATTTGTTCCTACTTTGTGATCAATCGCAGGAAACTCAGCGTCTCCTCAGTGAGCCTGGTGAGTTTTTGATTATTTTAAAGGGTTTGAGTTATTTGATTCCTGATCTTGTTACTTGGAATTGTTTGTTTTTTGGGTATTGGGTGTGGATAGGTTTTATGGTGTGGATTTATTCATCAGATAATTATGAAGTTGAAGTTCATTTTGATTTATTTGATCTTGATCTCTGATAATGTGATTTTAGCCCCTGGGATTAGCGCCTCGCCGTCAGAAGATAACATGCGATATTTTAACGTGATGATTCTTGGCCCGACCCAGTCACCCTATGAAGGTAAATTACTTGACAGTACGTTATGGTTGTGGGAACGTCAAATTATTTTGAAAATTTTGCTATTCCTTTGTTGGTAATATGGATGGTTATAGAACCAACTACGTATTCAAGTGAAGATTGGCTAAAGTGTTACTGATATTGATATGTTTACTCCTATGAAAATGGCATGTCGTTATCAGTGAAGATCAACTGTGGGAACATCTTTTACTCATAAAGACCTCAATTTTGTTTAGTTAAGTATTTTACTCATGTCGTTTGTGCTTGAACATTTCCTTTATGCCCCATGATGCAACAGTAGAATACTACTGTTCTGAGCTGCAAAGCTTGAGAACATGCTGGTTATCATGCCACGATTTTTATTCAATAATGTTAATGTATTCCTTCAATCTGAGTTCCTTTTCTTCTTATCCTTGGTCACATTTAATGTTGTTAATCTGTTTCTATATTGTTCTTCGCATATACTTGTGCTGAATTCAATGTACTTTACAGGAGGAGTTTTCAAGTTGGAACTATTTTTGCCTGAAGAATATCCTATGGCTGCTCCCAAGGTAATTTGCAATTCATCATTCCTGGGATATCTTCCCGCACTTATTCGACAAATCCTACTTGCATTTCTTCCACTGTTATTCTTTTCAAATAATTAGACATGTTTACCTTTTGTTTTGCGTTACATTAAAAGAAAAAAATTATTAGCAAATGCATCCAATAAAAATCATAGGGCTAATGGGTGATCACCAAATATTGTTGGATCATTTGAAAACTTCTTATGCCAAATGTGCTGTTAAATTTTCATATAATTATTGAGCTACTTATGTTTTCTTGTCCTTACTTCTTGATTGTGATTTCATTTATGGATCATGAGATTGTTAAAACTTCGTTTGATATTGGATTTTCCATAATTACTATTCTTCTTGTCGAATTCGCATCTTCCCCCCTCTGTTAAGGTTTTCCTATCTTGCACTGAACATATAACAAAAATTCCAAGTCATCATAATTTATTTTGCATACACGTAGTTTTTAATGTTTCACGAATCTTGACATTTACGTCTATAATACAACTTAATTCTGTTTGATCTATGGAACACGTGGGAATAAATTTATATTGCTATTACATGAAGAAGTTTTTGGTATTTGAGATCGTCATGGTTGGAGATGGGAGGATAGTTTTTTTTTTTTATGACCTGCTTCATCAGCCGATTGGTTTGAAAGACTGAGAAGGGAAACATGTTTGGCTGATTTTTTAAAATATAAATTTGATCCACATAGAAAAGAGACGTATCCAAAGGAGAAATTTTTAATCAAAATTGAACAATCTTATTTAAGGGTTGTCCAATAACTGCAGATTCTGTATCTAGGTACACTAGGTAATCCTATTGGAACATATTTTAACCTGTTTTGAGTTCCTCCACCGCCACCTTTTCCCTTTTCCCTTTTCCATTTTCTCACATTTTTTTTTTGTGGAAACAGGTTCGATTTCTGACGAAGATTTATCATCCAAATATTGATAAGGTAAGTGTCTACTTGCGTAGTTCTTATTGCCATCCTCACCAACATTCTGCAGTTGGTTGCTGATGGCGTGAATTTCTGCAATTAAGCTTGGCAGGATATGCCTTGACATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGGTATATTAATGTTTAATGCAATTTTCCAGTGCATCCGCATATTAGCTTTGAACATATTGCATGGTCTTTCACTCATTTAATTCACTCTAGGGATACAGATCTGAAAATTTGACCACCGTGTAATTTATGATAAATTTAACTATATCACTTTGGTTTATATATCACAGTATCCAAGCACTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAATATTGCCAAACATTGGAAAACGAATGAGGCAGAGGCTGTTGAAACAGGTGAGTTGGTCTACTTTATTGCTTTTGTTGAGCTTTTCTTTTTCAATGAGTAG

mRNA sequence

CTTATTGGGACAGAAAGATCGTAATAATTGGAGTGTGCAGAAAGTTGTACCTTCAAACTTCGTTCAAGTATTTATAATCTAGAGAGAGGAAAGCGTCTCCTCTCCAATCTCTCTCTTCTTCGTTTCCTAAACCCTATCCCAAGCTCTGCAATCCGACCTCAAATGGCGAACAGTAATCTTCCCCGAAGAATCATTAAGGAAACTCAGCGTCTCCTCAGTGAGCCTGCCCCTGGGATTAGCGCCTCGCCGTCAGAAGATAACATGCGATATTTTAACGTGATGATTCTTGGCCCGACCCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAACTATTTTTGCCTGAAGAATATCCTATGGCTGCTCCCAAGGTTCGATTTCTGACGAAGATTTATCATCCAAATATTGATAAGCTTGGCAGGATATGCCTTGACATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGTATCCAAGCACTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAATATTGCCAAACATTGGAAAACGAATGAGGCAGAGGCTGTTGAAACAGGTGAGTTGGTCTACTTTATTGCTTTTGTTGAGCTTTTCTTTTTCAATGAGTAG

Coding sequence (CDS)

ATGGCGAACAGTAATCTTCCCCGAAGAATCATTAAGGAAACTCAGCGTCTCCTCAGTGAGCCTGCCCCTGGGATTAGCGCCTCGCCGTCAGAAGATAACATGCGATATTTTAACGTGATGATTCTTGGCCCGACCCAGTCACCCTATGAAGGAGGAGTTTTCAAGTTGGAACTATTTTTGCCTGAAGAATATCCTATGGCTGCTCCCAAGGTTCGATTTCTGACGAAGATTTATCATCCAAATATTGATAAGCTTGGCAGGATATGCCTTGACATTCTGAAAGACAAATGGAGTCCAGCTCTACAGATACGAACTGTACTTTTGAGTATCCAAGCACTTCTGAGTGCTCCAAACCCAGATGATCCACTTTCCGAGAATATTGCCAAACATTGGAAAACGAATGAGGCAGAGGCTGTTGAAACAGGTGAGTTGGTCTACTTTATTGCTTTTGTTGAGCTTTTCTTTTTCAATGAGTAG

Protein sequence

MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKTNEAEAVETGELVYFIAFVELFFFNE
Homology
[Close]
BLAST of CmaCh04G005730 vs. Swiss-Prot
Match: UBC35_ARATH (Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.2e-76
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGE 144
           DPLSENIAKHWK+NEAEAV+T +
Sbjct: 121 DPLSENIAKHWKSNEAEAVDTAK 143

[Close]
BLAST of CmaCh04G005730 vs. Swiss-Prot
Match: UBC36_ARATH (Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 2.9e-76
Identity = 139/143 (97.20%), Postives = 142/143 (99.30%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGE 144
           DPLSENIAKHWK+NEAEAVET +
Sbjct: 121 DPLSENIAKHWKSNEAEAVETAK 143

[Close]
BLAST of CmaCh04G005730 vs. Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.8e-63
Identity = 112/138 (81.16%), Postives = 125/138 (90.58%), Query Frame = 1 

Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEE
Sbjct: 2   AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEE 61

Query: 64  YPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
           YPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL
Sbjct: 62  YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121

Query: 124 SENIAKHWKTNEAEAVET 142
           + ++A+ WKTNEA+A+ET
Sbjct: 122 ANDVAEQWKTNEAQAIET 139

[Close]
BLAST of CmaCh04G005730 vs. Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.8e-63
Identity = 112/138 (81.16%), Postives = 125/138 (90.58%), Query Frame = 1 

Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEE
Sbjct: 2   AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEE 61

Query: 64  YPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
           YPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL
Sbjct: 62  YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121

Query: 124 SENIAKHWKTNEAEAVET 142
           + ++A+ WKTNEA+A+ET
Sbjct: 122 ANDVAEQWKTNEAQAIET 139

[Close]
BLAST of CmaCh04G005730 vs. Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.8e-63
Identity = 112/138 (81.16%), Postives = 125/138 (90.58%), Query Frame = 1 

Query: 4   SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEE 63
           + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP  SP+EGG FKLELFLPEE
Sbjct: 2   AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEE 61

Query: 64  YPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 123
           YPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL
Sbjct: 62  YPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121

Query: 124 SENIAKHWKTNEAEAVET 142
           + ++A+ WKTNEA+A+ET
Sbjct: 122 ANDVAEQWKTNEAQAIET 139

[Close]
BLAST of CmaCh04G005730 vs. TrEMBL
Match: A0A0D2SFU0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G173200 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.5e-76
Identity = 142/144 (98.61%), Postives = 144/144 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGEL 145
           DPLSENIAKHWKTNEAEAVETG++
Sbjct: 121 DPLSENIAKHWKTNEAEAVETGKI 144

[Close]
BLAST of CmaCh04G005730 vs. TrEMBL
Match: A0A0D2Q0K6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G042900 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 9.9e-76
Identity = 141/146 (96.58%), Postives = 145/146 (99.32%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGI+ASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGINASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGELVY 147
           DPLSENIAKHWKTNEAEAVETG+ ++
Sbjct: 121 DPLSENIAKHWKTNEAEAVETGKTLW 146

[Close]
BLAST of CmaCh04G005730 vs. TrEMBL
Match: A0A061F987_THECC (Ubiquitin-conjugating enzyme 36 isoform 2 OS=Theobroma cacao GN=TCM_031769 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 9.9e-76
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 52  MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 111

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 112 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 171

Query: 121 DPLSENIAKHWKTNEAEAVETG 143
           DPLSENIAKHWKTNEAEAVETG
Sbjct: 172 DPLSENIAKHWKTNEAEAVETG 193

[Close]
BLAST of CmaCh04G005730 vs. TrEMBL
Match: A0A067KL40_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14732 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 3.8e-75
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGE 144
           DPLSENIAKHWKTNEAEAVET +
Sbjct: 121 DPLSENIAKHWKTNEAEAVETAK 143

[Close]
BLAST of CmaCh04G005730 vs. TrEMBL
Match: B9SBK8_RICCO (Ubiquitin-conjugating enzyme E2 N, putative OS=Ricinus communis GN=RCOM_0341640 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 3.8e-75
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGE 144
           DPLSENIAKHWKTNEAEAVET +
Sbjct: 121 DPLSENIAKHWKTNEAEAVETAK 143

[Close]
BLAST of CmaCh04G005730 vs. TAIR10
Match: AT1G78870.1 (AT1G78870.1 ubiquitin-conjugating enzyme 35)

HSP 1 Score: 281.6 bits (719), Expect = 3.0e-76
Identity = 139/144 (96.53%), Postives = 142/144 (98.61%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEG-GVFKLELF 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEG GVFKLELF
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGRGVFKLELF 60

Query: 61  LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 120
           LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP
Sbjct: 61  LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 120

Query: 121 DDPLSENIAKHWKTNEAEAVETGE 144
           DDPLSENIAKHWK+NEAEAV+T +
Sbjct: 121 DDPLSENIAKHWKSNEAEAVDTAK 144

[Close]
BLAST of CmaCh04G005730 vs. TAIR10
Match: AT1G16890.3 (AT1G16890.3 ubiquitin-conjugating enzyme 36)

HSP 1 Score: 276.9 bits (707), Expect = 7.5e-75
Identity = 138/152 (90.79%), Postives = 142/152 (93.42%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSE---------PAPGISASPSEDNMRYFNVMILGPTQSPYEG 60
           MANSNLPRRIIKETQRLLSE         P+PGISASPSE+NMRYFNVMILGPTQSPYEG
Sbjct: 1   MANSNLPRRIIKETQRLLSEPGNFITSFDPSPGISASPSEENMRYFNVMILGPTQSPYEG 60

Query: 61  GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ 120
           GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ
Sbjct: 61  GVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQ 120

Query: 121 ALLSAPNPDDPLSENIAKHWKTNEAEAVETGE 144
           ALLSAPNPDDPLSENIAKHWK+NEAEAVET +
Sbjct: 121 ALLSAPNPDDPLSENIAKHWKSNEAEAVETAK 152

[Close]
BLAST of CmaCh04G005730 vs. TAIR10
Match: AT2G16740.1 (AT2G16740.1 ubiquitin-conjugating enzyme 29)

HSP 1 Score: 142.5 bits (358), Expect = 2.2e-34
Identity = 67/130 (51.54%), Postives = 90/130 (69.23%), Query Frame = 1 

Query: 8   RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
           RRI+KE + L  +P    SA P+ ++M ++   I+GP +SPY GGVF + +  P +YP  
Sbjct: 4   RRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFK 63

Query: 68  APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
            PKV F TK++HPNI+  G ICLDILKD+WSPAL I  VLLSI +LL+ PNPDDPL   I
Sbjct: 64  PPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123

Query: 128 AKHWKTNEAE 138
           A  +KT++ +
Sbjct: 124 AHIYKTDKTK 133

[Close]
BLAST of CmaCh04G005730 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 141.4 bits (355), Expect = 4.9e-34
Identity = 67/134 (50.00%), Postives = 90/134 (67.16%), Query Frame = 1 

Query: 8   RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
           +RI+KE + L  +P    SA P  ++M ++   I+GP +SPY GGVF + +  P +YP  
Sbjct: 4   KRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFK 63

Query: 68  APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
            PKV F TK+YHPNI+  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL   I
Sbjct: 64  PPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123

Query: 128 AKHWKTNEAEAVET 142
           A  +KT+ ++   T
Sbjct: 124 AHMYKTDRSKYEST 137

[Close]
BLAST of CmaCh04G005730 vs. TAIR10
Match: AT5G53300.1 (AT5G53300.1 ubiquitin-conjugating enzyme 10)

HSP 1 Score: 139.0 bits (349), Expect = 2.4e-33
Identity = 65/128 (50.78%), Postives = 89/128 (69.53%), Query Frame = 1 

Query: 8   RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
           +RI+KE + L  +P    SA P  ++M ++   I+GP++SPY GGVF + +  P +YP  
Sbjct: 4   KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFK 63

Query: 68  APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENI 127
            PKV F TK++HPNI+  G ICLDILK++WSPAL I  VLLSI +LL+ PNPDDPL   I
Sbjct: 64  PPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123

Query: 128 AKHWKTNE 136
           A  +KT++
Sbjct: 124 AHMYKTDK 131

[Close]
BLAST of CmaCh04G005730 vs. NCBI nr
Match: gi|763815190|gb|KJB82042.1| (hypothetical protein B456_013G173200 [Gossypium raimondii])

HSP 1 Score: 292.0 bits (746), Expect = 6.4e-76
Identity = 142/144 (98.61%), Postives = 144/144 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGEL 145
           DPLSENIAKHWKTNEAEAVETG++
Sbjct: 121 DPLSENIAKHWKTNEAEAVETGKI 144

[Close]
BLAST of CmaCh04G005730 vs. NCBI nr
Match: gi|590610106|ref|XP_007021722.1| (Ubiquitin-conjugating enzyme 36 isoform 2 [Theobroma cacao])

HSP 1 Score: 290.8 bits (743), Expect = 1.4e-75
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 52  MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 111

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 112 PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 171

Query: 121 DPLSENIAKHWKTNEAEAVETG 143
           DPLSENIAKHWKTNEAEAVETG
Sbjct: 172 DPLSENIAKHWKTNEAEAVETG 193

[Close]
BLAST of CmaCh04G005730 vs. NCBI nr
Match: gi|763745450|gb|KJB12889.1| (hypothetical protein B456_002G042900 [Gossypium raimondii])

HSP 1 Score: 290.8 bits (743), Expect = 1.4e-75
Identity = 141/146 (96.58%), Postives = 145/146 (99.32%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGI+ASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGINASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGELVY 147
           DPLSENIAKHWKTNEAEAVETG+ ++
Sbjct: 121 DPLSENIAKHWKTNEAEAVETGKTLW 146

[Close]
BLAST of CmaCh04G005730 vs. NCBI nr
Match: gi|593697850|ref|XP_007149398.1| (hypothetical protein PHAVU_005G066900g [Phaseolus vulgaris])

HSP 1 Score: 288.9 bits (738), Expect = 5.4e-75
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGE 144
           DPLSENIAKHWKTNEAEAVET +
Sbjct: 121 DPLSENIAKHWKTNEAEAVETAK 143

[Close]
BLAST of CmaCh04G005730 vs. NCBI nr
Match: gi|525507031|ref|NP_001267560.1| (ubiquitin-conjugating enzyme E2 35-like [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 5.4e-75
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 1 

Query: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60
           MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL
Sbjct: 1   MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFL 60

Query: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120
           PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD
Sbjct: 61  PEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPD 120

Query: 121 DPLSENIAKHWKTNEAEAVETGE 144
           DPLSENIAKHWKTNEAEAVET +
Sbjct: 121 DPLSENIAKHWKTNEAEAVETAK 143

The following BLAST results are available for this feature:
BLAST of CmaCh04G005730 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBC35_ARATH2.2e-7697.20Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1[more]
UBC36_ARATH2.9e-7697.20Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1[more]
UBE2N_BOVIN4.8e-6381.16Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1[more]
UBE2N_HUMAN4.8e-6381.16Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1[more]
UBE2N_MOUSE4.8e-6381.16Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1[more]
BLAST of CmaCh04G005730 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2SFU0_GOSRA4.5e-7698.61Uncharacterized protein OS=Gossypium raimondii GN=B456_013G173200 PE=3 SV=1[more]
A0A0D2Q0K6_GOSRA9.9e-7696.58Uncharacterized protein OS=Gossypium raimondii GN=B456_002G042900 PE=3 SV=1[more]
A0A061F987_THECC9.9e-76100.00Ubiquitin-conjugating enzyme 36 isoform 2 OS=Theobroma cacao GN=TCM_031769 PE=3 ... [more]
A0A067KL40_JATCU3.8e-7598.60Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14732 PE=3 SV=1[more]
B9SBK8_RICCO3.8e-7598.60Ubiquitin-conjugating enzyme E2 N, putative OS=Ricinus communis GN=RCOM_0341640 ... [more]
BLAST of CmaCh04G005730 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G78870.13.0e-7696.53 ubiquitin-conjugating enzyme 35[more]
AT1G16890.37.5e-7590.79 ubiquitin-conjugating enzyme 36[more]
AT2G16740.12.2e-3451.54 ubiquitin-conjugating enzyme 29[more]
AT3G08690.14.9e-3450.00 ubiquitin-conjugating enzyme 11[more]
AT5G53300.12.4e-3350.78 ubiquitin-conjugating enzyme 10[more]
BLAST of CmaCh04G005730 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|763815190|gb|KJB82042.1|6.4e-7698.61hypothetical protein B456_013G173200 [Gossypium raimondii][more]
gi|590610106|ref|XP_007021722.1|1.4e-75100.00Ubiquitin-conjugating enzyme 36 isoform 2 [Theobroma cacao][more]
gi|763745450|gb|KJB12889.1|1.4e-7596.58hypothetical protein B456_002G042900 [Gossypium raimondii][more]
gi|593697850|ref|XP_007149398.1|5.4e-7598.60hypothetical protein PHAVU_005G066900g [Phaseolus vulgaris][more]
gi|525507031|ref|NP_001267560.1|5.4e-7598.60ubiquitin-conjugating enzyme E2 35-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G005730.1CmaCh04G005730.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 9..137
score: 3.1
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 8..140
score: 42
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 2..140
score: 1.3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 7..137
score: 1.97
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 78..93
scor
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 1..141
score: 5.0E
NoneNo IPR availablePANTHERPTHR24067:SF159UBIQUITIN-CONJUGATING ENZYME E2 36coord: 1..141
score: 5.0E
NoneNo IPR availableSMARTSM00212ubc_7coord: 8..151
score: 5.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G005730CmoCh04G006130Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G005730Cp4.1LG01g01580Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G005730Carg13164Silver-seed gourdcarcmaB0055
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G005730Cucumber (Chinese Long) v3cmacucB0849
CmaCh04G005730Watermelon (97103) v2cmawmbB777
CmaCh04G005730Cucurbita maxima (Rimu)cmacmaB351
CmaCh04G005730Cucumber (Gy14) v1cgycmaB0764
CmaCh04G005730Cucurbita moschata (Rifu)cmacmoB701
CmaCh04G005730Wild cucumber (PI 183967)cmacpiB723
CmaCh04G005730Cucumber (Chinese Long) v2cmacuB715
CmaCh04G005730Melon (DHL92) v3.5.1cmameB696
CmaCh04G005730Watermelon (Charleston Gray)cmawcgB670
CmaCh04G005730Cucurbita pepo (Zucchini)cmacpeB715
CmaCh04G005730Cucumber (Gy14) v2cgybcmaB551
CmaCh04G005730Silver-seed gourdcarcmaB0925