Cp4.1LG01g01360 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g01360
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Trihelix transcription factor GT-3a-like protein
Location	Cp4.1LG01 : 3024161 .. 3028506 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGAAGAAAAACAATGTCTTATCAAGTGATCAAAAGTCATAGGTGGACGAGTAAATTAAAAGATCGCCAAATTTCAACGATTCCTTTCCTTCTTTAAGAAGCAAGCCGGAAAAGGCCGATAATGGAATGAGGGCCTTCGTCAATCACAAATTTCCACCATTAAATTTCTCATCGGAGTTCGCCGATGTCACCGCCGTCCACTGTTTTCACTGAAGCCGAAGCTAGAGCCCTGCAATAGTATCAACCATGACCTCGAGCGCGATGGCGGCGACGGCTCAGCAACACCAGTGGAGCGAGGAGGAGACGAGGGAGTTCATCCGGATTCGAGCCGACCTAGAGAGGGACCTGACGGCGGTTTCCACCGGAGAAGGTGCGGCGGTGAAGAAGAAGACACTGTGGGACATGGCGAGTGCAAGGATGAGAGAGCGAGGGTTTTGGAGGACCGCCTATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGGTTCGTCCAGTTTCCATTCCGTATTCATTTGAGGATTTTTTTTTTTTTAATCAGTCTGTTCTCCGTTATGTTTCTTTCAAGTGGGCTCCTCTGAATCTGGACTGTTCTTGCTTTGATATTTTGATTCTCATGGATTTCGATTGGGTTCAATTTTGCCATTTATGGTTGCAAATTCTTAAAGCTAAATCTGAGAAAGGTAGTAAAATGCTGATAATGTCTCGCAACATGCGGACGAGAAAATGACAAGATGTCATAAAGTCTTTATTCAAAATAGACACGTTTTGACCTTTCAAAACTCTAGCTGCCTGTAATTGCCTGTAAGAGGAGGTTTGGAGAAAATGGTTAGAATTGAAGGGTATTGCTAAGAGGTAGCTACCATTGTTTTTGGAGATTTGTCTCGCAAAATGGCTTTCTTCATTTCTAGGAGTACATATCAACTCAGACACGGTGGCAAAATTAGATATCTGTTGACTACTTGTACAAGATACATCATTCTACTTAATTTCCTAGGTGTATGTTTTGTCAAAGTGTGGTAATGCTTCCATTTCCAGTCTTGTTTCTGTCCAATCTTCTTGTCGAAGTGATAAGAGATTCTTGACTGTGCCTCCTCTAGAATCTAGAAAATCTGGCTGTTCTTAAGTTTTCTCTTATAGATCTTTCTTACACAATCTCTTAGTTACCTGTGAATGGTCAGCCTTTCAATTCTAATCTCTTAGTTACCCCAATGGATGAAAAGCCGAAGTTGATTCCAAAAGGCTTTCTGGTTAACATTTAATGGAATTTGGTTCTCAGATTTCATTCTGAACAAAGACCTGTCCACGAACCATAGCCAAAGACTGCATTGCGCTGCATTATCTTATCACCTTACCATAATGAATGTGTGGCCAGCAAGAAGTTGAAGGAGATAGCCACAGAATTATGGAAAAAACTAGAAGGCAGTGATACCTTCTCCTATATTTCTGATAGGCTGCATCATAGAGGGGATAAGCAGACTTCAGGCTTAGGTTTATTTAACTTGATATTGTTACAAGTGTTAAGTTACCAAGAGCTACATGCACCAGACAAAGAACTTGACTTTGTTTTGACACTTCAGCTTCGTGAAGATGCGGGATTCACATGATGGGAAGAGGGGTAGAAGTTAGAATTAGTAAGAAGGTGATTGAAGAGGGATTCCACATCGGTTGGAGAGGAGAACAAAGCATTCTTTATAAAACCTTGAGGGGAAGCCCGAAAGGGAAATTCCAAAGAGGACTATCTGCTAGCGGTGGCTTTGGCCGTTACAAATGGTATCAGAGTCAGACACCAGGCGATTTGCCAACGAGGAGGTTGAGCCCCGAAGGGGGGTGGGCATGAGGCGGTGTGCCAGTAAGGACACTGGGCCTCGAAGGGGGTAGATTGGGGAGTCTCACATTGTTTGAAGAAGGGAATGAGTGCCAGCAAGGATACTGAGTCTCGAAGGGGGGTGGATTGTCAGATCCCACATTGGTTGAGGAGGATAACAAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACGTGTTTTAAAAACTTTGAGGGGAAGCTCGAAAGGGAAAACCCAAAAAGGACAATATCTGCTAGCAATGGGCTTGGACTGTTACAAATGGTATCAGAGCCAGAAATCGGGCGGTGTGCCATTGAGGACGTTGAGCTTCGAAGGAGTGTGGATTGTGAGATCCCACATCGAATGGAGAGGAGAACGAAGCGTTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGAAGCGTTTTAAAAACCTTGAGGGGAAGCTCAGAAGGAAAAATCCAAAAATGACAATATCTGCTAGCAGTGAGCTTGAGTCGTTACATTAACATGTGGAAAAAAGTTCAAAGAAAACAATATCTGCTAGAAGTGAGCTTGGGCCGTTACATTAACATGTGGAAAAAAGCTCAAAGAGGACAATATCTGCTAGCAGTGATCTTGGGCCGTTACATTAACACGTGAAAAAAAACCAGATATATGTCATTCTAACTCTTGTTTTATCCATGAGATCAATGAGCTCCTATGATAAAAACAAGCGCAGTTAATTCAGGAAGTTTCTCGTTCACTAAAACCCATCTTAACTGAGCTTCCTGCTCTCTCTTTAAAGCACCTTCTTAAACTAAAGTTTCCAAACAAGAACTTGCAGTGCCATTACAGTTCAAACATCGAGTGTGGTCTACATTGCGAGTGAAAAATTAACCTGAACCCTTTCTTTATGTGGGAGGTTGGTCATAAGTGGCGAAACATTTAATTGCTTCCCATATATGCAGTAATTCTCGTTCATTAGTATTTGTAGAAAAGACATCTTTTACTTTTAGATCCGTTTCATGTAATTCCGACTAAACTCTTCATAGAATTGTAGTAATAACATAGCCTAGAATTAGTTTGACTTGTCAAGTCCAATTTTGGCCCCAAAACTCAATGAGCTAAAGATACCCCTAGAAGTTGAGGCAGTTGGCATTGTTTATGTTGTTTAATCACCGTCATATGCTTCTAATTTTATAATGGTTGTACAGGGGAAGGAGACAACCCATAAAGAGTTTGGCTGGCAATGCCCATTTTTTGAGGAAATCCGTGCAGTATTTGCCGTAAGGGAGAAAGCTATGCACCGATTGCTCCTTGAACCTGAAGCAGGTTCTAGTGCAACAAAGAAAAGAGGGAGGGAGAGAAGTTTAGAAGAATATTCAGATCTCAAAGAACTTGATGAAGAAGAAAGTGAGGAGGAGATCCCAACTCAAAGCAACTCACAGAAGGGAAAGGCTATAGGAACTCAGTACCCAGCAAAGTCTTTAAGAACGGCTGGTTCTAAACGTTCAAGTAGCTCGGTTAGTAATGAAATCCTAGAGTTGTTGAAGGGCTTCTTTCAGTGGCAGCAGAGGATGGAAATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGACGAATGTTGGAGCAGGAATGGCGTGACTCGATGGAGAAGCTCGAGAGGGAGAGGTTAATGACTGAGAAAGCTTGGAGGGAAAGAGAAGAACAGAGAAAGAAAAGACAAGATATCCGTGCTCAAGGAATGGATGCTCTCTTAACAGACCTTTTAAACAAGCTCAACCGCGAAAATAATTTATGAGACGATGAGATAAAAAACGGTACTGATTCCCGAGAATGAGATATAGTTGAAGCAAAAAAGGAAGAATGTAGTTACAGCAACACTATTTTTGAAGGCATGGTAGATATAAAAAATTCAGATTTGTGGCTGATAGTACATATCACATATGCAATTTTTCACAAGTGTCTAGCCTGATTGTATGCATACAGAGATTGAACAGTTTTCTCCCAGGAATTTATAGCTCTTGGAAGAAAAAAGAATACATTGTTATGTACATTATCAGTATTGAAGAAAACCTATGAAGTTTAGCTTGAATTAAGAATCTTATTACTATGATCACCTTCCTATTCTCTTCTGTGATGATTAGCCTATTCATTTGTATCATTTTATGCTGGAAACAAGGCCATTTCTTTCAAGGATTCCATATTTTCTAAGGCACAGAGAAAATTAGACTGGGAATGTGGAATAAGCATGCTAGAGTTTGGTTTATTTTACAAGTGACGGAACAAATCATCATTCTTTCTAGTACATTTTAAGAACAATAAATATGAAGACAATACCAGCAACTTTCATTGATCTGAACATAAGAGAACTTCGAAATGCCTTCAATATGTAGTGGCACACATACTTCAACGTGCAAGCGACGATTCAGCCCGATTCTGATGGTGGCTTTTCCTTTGGATGTTTGGAGGCATAATGATCGCCCAATTGATTATGATTTGCTAGTTGTACCTG

mRNA sequence

AAAGGAAGAAAAACAATGTCTTATCAAGTGATCAAAAGTCATAGGTGGACGAGTAAATTAAAAGATCGCCAAATTTCAACGATTCCTTTCCTTCTTTAAGAAGCAAGCCGGAAAAGGCCGATAATGGAATGAGGGCCTTCGTCAATCACAAATTTCCACCATTAAATTTCTCATCGGAGTTCGCCGATGTCACCGCCGTCCACTGTTTTCACTGAAGCCGAAGCTAGAGCCCTGCAATAGTATCAACCATGACCTCGAGCGCGATGGCGGCGACGGCTCAGCAACACCAGTGGAGCGAGGAGGAGACGAGGGAGTTCATCCGGATTCGAGCCGACCTAGAGAGGGACCTGACGGCGGTTTCCACCGGAGAAGGTGCGGCGGTGAAGAAGAAGACACTGTGGGACATGGCGAGTGCAAGGATGAGAGAGCGAGGGTTTTGGAGGACCGCCTATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGGGGAAGGAGACAACCCATAAAGAGTTTGGCTGGCAATGCCCATTTTTTGAGGAAATCCGTGCAGTATTTGCCGTAAGGGAGAAAGCTATGCACCGATTGCTCCTTGAACCTGAAGCAGGTTCTAGTGCAACAAAGAAAAGAGGGAGGGAGAGAAGTTTAGAAGAATATTCAGATCTCAAAGAACTTGATGAAGAAGAAAGTGAGGAGGAGATCCCAACTCAAAGCAACTCACAGAAGGGAAAGGCTATAGGAACTCAGTACCCAGCAAAGTCTTTAAGAACGGCTGGTTCTAAACGTTCAAGTAGCTCGGTTAGTAATGAAATCCTAGAGTTGTTGAAGGGCTTCTTTCAGTGGCAGCAGAGGATGGAAATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGACGAATGTTGGAGCAGGAATGGCGTGACTCGATGGAGAAGCTCGAGAGGGAGAGGTTAATGACTGAGAAAGCTTGGAGGGAAAGAGAAGAACAGAGAAAGAAAAGACAAGATATCCGTGCTCAAGGAATGGATGCTCTCTTAACAGACCTTTTAAACAAGCTCAACCGCGAAAATAATTTATGAGACGATGAGATAAAAAACGGTACTGATTCCCGAGAATGAGATATAGTTGAAGCAAAAAAGGAAGAATGTAGTTACAGCAACACTATTTTTGAAGGCATGGTAGATATAAAAAATTCAGATTTGTGGCTGATAGTACATATCACATATGCAATTTTTCACAAGTGTCTAGCCTGATTGTATGCATACAGAGATTGAACAGTTTTCTCCCAGGAATTTATAGCTCTTGGAAGAAAAAAGAATACATTGTTATGTACATTATCAGTATTGAAGAAAACCTATGAAGTTTAGCTTGAATTAAGAATCTTATTACTATGATCACCTTCCTATTCTCTTCTGTGATGATTAGCCTATTCATTTGTATCATTTTATGCTGGAAACAAGGCCATTTCTTTCAAGGATTCCATATTTTCTAAGGCACAGAGAAAATTAGACTGGGAATGTGGAATAAGCATGCTAGAGTTTGGTTTATTTTACAAGTGACGGAACAAATCATCATTCTTTCTAGTACATTTTAAGAACAATAAATATGAAGACAATACCAGCAACTTTCATTGATCTGAACATAAGAGAACTTCGAAATGCCTTCAATATGTAGTGGCACACATACTTCAACGTGCAAGCGACGATTCAGCCCGATTCTGATGGTGGCTTTTCCTTTGGATGTTTGGAGGCATAATGATCGCCCAATTGATTATGATTTGCTAGTTGTACCTG

Coding sequence (CDS)

ATGACCTCGAGCGCGATGGCGGCGACGGCTCAGCAACACCAGTGGAGCGAGGAGGAGACGAGGGAGTTCATCCGGATTCGAGCCGACCTAGAGAGGGACCTGACGGCGGTTTCCACCGGAGAAGGTGCGGCGGTGAAGAAGAAGACACTGTGGGACATGGCGAGTGCAAGGATGAGAGAGCGAGGGTTTTGGAGGACCGCCTATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGGGGAAGGAGACAACCCATAAAGAGTTTGGCTGGCAATGCCCATTTTTTGAGGAAATCCGTGCAGTATTTGCCGTAAGGGAGAAAGCTATGCACCGATTGCTCCTTGAACCTGAAGCAGGTTCTAGTGCAACAAAGAAAAGAGGGAGGGAGAGAAGTTTAGAAGAATATTCAGATCTCAAAGAACTTGATGAAGAAGAAAGTGAGGAGGAGATCCCAACTCAAAGCAACTCACAGAAGGGAAAGGCTATAGGAACTCAGTACCCAGCAAAGTCTTTAAGAACGGCTGGTTCTAAACGTTCAAGTAGCTCGGTTAGTAATGAAATCCTAGAGTTGTTGAAGGGCTTCTTTCAGTGGCAGCAGAGGATGGAAATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGACGAATGTTGGAGCAGGAATGGCGTGACTCGATGGAGAAGCTCGAGAGGGAGAGGTTAATGACTGAGAAAGCTTGGAGGGAAAGAGAAGAACAGAGAAAGAAAAGACAAGATATCCGTGCTCAAGGAATGGATGCTCTCTTAACAGACCTTTTAAACAAGCTCAACCGCGAAAATAATTTATGA

Protein sequence

MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSKRSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL

Homology

[Close]

BLAST of Cp4.1LG01g01360 vs. Swiss-Prot
Match: TGT3B_ARATH (Trihelix transcription factor GT-3b OS=Arabidopsis thaliana GN=GT-3B PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.5e-35
Identity = 109/278 (39.21%), Postives = 159/278 (57.19%), Query Frame = 1


Query: 3   SSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERG 62
           +S +A   +  QWS EET+E I IR +L++             + K LW++ S +MR++ 
Sbjct: 30  ASPVAVGDRFPQWSVEETKELIGIRGELDQTFMETK-------RNKLLWEVISNKMRDKS 89

Query: 63  FWRTAYQCKCKWKNLLSRYKGKETTHKEFG-WQCPFFEEIRAVFAVREKAMHRLLLEPEA 122
           F R+  QCKCKWKNL++R+KG ET   E    Q PF+++++ +F  R + M  L  E E 
Sbjct: 90  FPRSPEQCKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQNIFTTRMQRM--LWAESEG 149

Query: 123 GSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSKR 182
           G   T    R+R   EYS  +E  EE   EE+   SN    K +  +      R  GS  
Sbjct: 150 GGGGTSGAARKR---EYSSDEE--EENVNEELVDVSNDP--KILNPKKNIAKKRKGGS-- 209

Query: 183 SSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTE 242
           +SS+ +N + E+L+ F + Q RME EWRE  E     R   E+EWR  ME+LE+ERL  E
Sbjct: 210 NSSNSNNGVREVLEEFMRHQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAME 269

Query: 243 KAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 280
           + WR+REEQR+ R+++RA+  D+L+  LL KL R+ +L
Sbjct: 270 RMWRDREEQRRSREEMRAEKRDSLINALLAKLTRDGSL 289

[Close]

BLAST of Cp4.1LG01g01360 vs. Swiss-Prot
Match: TGT3A_ARATH (Trihelix transcription factor GT-3a OS=Arabidopsis thaliana GN=GT-3A PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.8e-31
Identity = 95/276 (34.42%), Postives = 152/276 (55.07%), Query Frame = 1


Query: 14  QWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           QWS EET+E + IR +L++             + K LW++ +A+M ++GF R+A QCK K
Sbjct: 51  QWSIEETKELLAIREELDQTFMETK-------RNKLLWEVVAAKMADKGFVRSAEQCKSK 110

Query: 74  WKNLLSRYKGKETTHKE-FGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKKRGRE 133
           WKNL++RYK  ETT  +    Q PF+ EI+++F  R + M    L  EA   +T  + + 
Sbjct: 111 WKNLVTRYKACETTEPDAIRQQFPFYNEIQSIFEARMQRM----LWSEATEPSTSSKRKH 170

Query: 134 RSLEEYSDLKELDE--EESEEEIPTQSNSQKGK--------AIGTQYPAKSLRTAGSKRS 193
                  + +E+DE  ++  EE+ +   +QK +        +   +  AK  +   S   
Sbjct: 171 HQFSSDDEEEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTK 230

Query: 194 SSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEK 253
           + +  N + ++L+ F +   +ME EWR+  E     R   E+EWR  M +LE ER  TE+
Sbjct: 231 AETAGNTLKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATER 290

Query: 254 AWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENN 279
            W EREE+R+ R++ RAQ  D+L+  LLN+LNR++N
Sbjct: 291 RWMEREEERRLREEARAQKRDSLIDALLNRLNRDHN 315

[Close]

BLAST of Cp4.1LG01g01360 vs. TrEMBL
Match: A0A0A0KV13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055350 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 7.3e-114
Identity = 223/275 (81.09%), Postives = 242/275 (88.00%), Query Frame = 1


Query: 6   MAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWR 65
           MAAT  QHQWSEEETREFIRIRADLE+DL AVS GE  A KKKTLW+MAS RMRE+GFWR
Sbjct: 1   MAATPHQHQWSEEETREFIRIRADLEKDLAAVSIGEAPAAKKKTLWEMASVRMREKGFWR 60

Query: 66  TAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSA 125
           TA QCKCKWKNLLSRYKGKET+HKE+GWQCPFFEEI AVF  R KAMHRLLLEPEA S +
Sbjct: 61  TADQCKCKWKNLLSRYKGKETSHKEYGWQCPFFEEIHAVFTERGKAMHRLLLEPEACSIS 120

Query: 126 TKKRGRERSLEEYSDLKELDEEESEEEIP-TQSNSQKGKAIGTQYPAKSLRTAGSKRSSS 185
           TKKRGRERSLEE+SDLKEL+E+E+EEE+  TQSNSQK KA   + PAKSL    SK SSS
Sbjct: 121 TKKRGRERSLEEHSDLKELNEDENEEEVTFTQSNSQKRKA-ARKLPAKSLGATDSKSSSS 180

Query: 186 SVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEKAW 245
           S SNEI E+LKGFFQWQQRMEMEWREI+ERHYNNRRM EQEWR+SMEKLERERLM E+AW
Sbjct: 181 STSNEIQEMLKGFFQWQQRMEMEWREIVERHYNNRRMFEQEWRESMEKLERERLMAEQAW 240

Query: 246 REREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 280
           REREEQRK+RQDIRA+GM+ALLT LLNKLN ENNL
Sbjct: 241 REREEQRKERQDIRAEGMNALLTTLLNKLNHENNL 274

[Close]

BLAST of Cp4.1LG01g01360 vs. TrEMBL
Match: U5GMR3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s01210g PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.7e-67
Identity = 150/273 (54.95%), Postives = 196/273 (71.79%), Query Frame = 1


Query: 11  QQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQC 70
           QQ QW ++ET+EFI IRA+LE+D T          + KTLW++ S +MRE+G+ RT  QC
Sbjct: 38  QQPQWGQQETKEFIGIRAELEKDFTVTK-------RNKTLWEIVSVKMREKGYRRTPEQC 97

Query: 71  KCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKKRG 130
           KCKWKNL++RYKGKET+  E G QCPFFEE+ AVF  R K M RLLLE EAGS+ ++K+ 
Sbjct: 98  KCKWKNLVNRYKGKETSDPETGRQCPFFEELHAVFTERAKNMQRLLLESEAGSTQSRKKM 157

Query: 131 R----ERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSKRSSSSV 190
           +    +RS +E+S+ ++ DE++SEEE P +SNS+K K        + +    S R+SSS 
Sbjct: 158 KRTSGDRSSDEFSEEEDEDEDDSEEEKPVRSNSRKRKV-------EKIIAEKSPRASSST 217

Query: 191 SNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEKAWRE 250
              I E+LK F Q QQ+MEM+WRE++ER  + R+M EQEWR SMEKLERERLM E+AWRE
Sbjct: 218 VGGIQEMLKEFLQQQQKMEMQWREMMERRSHERQMFEQEWRQSMEKLERERLMIEQAWRE 277

Query: 251 REEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 280
           REEQR+ R++ RA+  DALLT LLNKL RENN+
Sbjct: 278 REEQRRIREESRAERRDALLTTLLNKLIRENNI 296

[Close]

BLAST of Cp4.1LG01g01360 vs. TrEMBL
Match: A0A061G7N3_THECC (Homeodomain-like superfamily protein OS=Theobroma cacao GN=TCM_016743 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.5e-63
Identity = 152/270 (56.30%), Postives = 189/270 (70.00%), Query Frame = 1


Query: 14  QWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           QW  EETRE I IR +LERD TA       A + KTLW++ SARMR+RG+ RT  QCKCK
Sbjct: 24  QWGPEETRELILIRGELERDFTA-------AKRNKTLWEIVSARMRDRGYIRTPDQCKCK 83

Query: 74  WKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKKRGR-- 133
           WKNLL+RYKGKET+  E G Q PFFEE+ AVF  R K M RLLLE EAGS+  KKR R  
Sbjct: 84  WKNLLNRYKGKETSDPENGRQFPFFEELHAVFTERAKNMQRLLLESEAGSTQAKKRMRRI 143

Query: 134 --ERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSKRSSSSVSNE 193
             +RS +E+S+ ++ DE+ESEEE   +S S + +        KS R   +  +SS+ S  
Sbjct: 144 SADRSSDEFSEEEDDDEDESEEERHARSISSRKRKADRVVLDKSPRP--NSGTSSTSSTG 203

Query: 194 ILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEKAWREREE 253
           + E+L+ FFQ QQRMEM+WRE++ER    R++ EQEWR SMEKLERERLM E+AWREREE
Sbjct: 204 LQEMLREFFQQQQRMEMQWREMMERRARERQLFEQEWRQSMEKLERERLMVEQAWREREE 263

Query: 254 QRKKRQDIRAQGMDALLTDLLNKLNRENNL 280
           QR+ R++ RA+  DALLT LLNKL  +NNL
Sbjct: 264 QRRLREESRAERRDALLTTLLNKLINDNNL 284

[Close]

BLAST of Cp4.1LG01g01360 vs. TrEMBL
Match: K7K3Z3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G150500 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 7.6e-63
Identity = 153/273 (56.04%), Postives = 192/273 (70.33%), Query Frame = 1


Query: 12  QHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCK 71
           Q QWS++ETREFI IRA+LERD TA       + + KTLW++ SA+MRERGF R+  QCK
Sbjct: 47  QPQWSQQETREFIAIRAELERDFTA-------SKRNKTLWEVVSAKMRERGFRRSPEQCK 106

Query: 72  CKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKK--- 131
           CKWKNL++RYKGKET+  E G QCPFFEE+ AVF  R   M RLLLE E  S+ TKK   
Sbjct: 107 CKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVK 166

Query: 132 -RGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKA--IGTQYPAKSLRTAGSKRSSSS 191
               +RS EE S+     E +SEEE P++SN++K K   +G +   KS R A +  +S+S
Sbjct: 167 RSSGDRSSEELSEDDNEVEYDSEEEKPSRSNTRKRKVDKVGVE---KSSR-ASNPSNSAS 226

Query: 192 VSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEKAWR 251
            S  I E+LK FFQ Q  MEM+WRE++ER  + R++ EQEWR SMEKLERERLM E+AWR
Sbjct: 227 NSTSIQEMLKEFFQHQLSMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQAWR 286

Query: 252 EREEQRKKRQDIRAQGMDALLTDLLNKLNRENN 279
           EREEQR+ R++ RA+  DALLT LLNKL  E+N
Sbjct: 287 EREEQRRMREESRAERRDALLTTLLNKLINESN 308

[Close]

BLAST of Cp4.1LG01g01360 vs. TrEMBL
Match: V7CJ09_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G126400g PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.3e-62
Identity = 147/270 (54.44%), Postives = 189/270 (70.00%), Query Frame = 1


Query: 12  QHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCK 71
           Q QWS++ETREFI IRA+LERD TA       + + KTLW++ S++MRERGF R+  QCK
Sbjct: 46  QPQWSQQETREFIAIRAELERDFTA-------SKRNKTLWEVVSSKMRERGFRRSPEQCK 105

Query: 72  CKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKKRGR 131
           CKWKNL++RYKGKET+  E   QCPFFEE+ AVF  R   M RLLLE E  S+ TKK  +
Sbjct: 106 CKWKNLVNRYKGKETSDPEHSRQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVK 165

Query: 132 ----ERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSKRSSSSVS 191
               +RS EE S+ ++  E +SEEE P++SN++K K         S R   S  + SS +
Sbjct: 166 RSSGDRSSEELSEDEDEVEYDSEEEKPSRSNTRKKKVDKVGIDKSSSRAYNSSHAVSSST 225

Query: 192 NEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEKAWRER 251
           + I E+LK FFQ Q RMEM+WRE++ER  + R++ EQEWR SMEKLERERL+ E+AWRER
Sbjct: 226 SSIQEMLKEFFQHQLRMEMKWREMMERRAHERQLFEQEWRQSMEKLERERLIIEQAWRER 285

Query: 252 EEQRKKRQDIRAQGMDALLTDLLNKLNREN 278
           EEQR+ R++ RA+  DALLT LLNKL  E+
Sbjct: 286 EEQRRMREESRAEKRDALLTTLLNKLINES 308

[Close]

BLAST of Cp4.1LG01g01360 vs. TAIR10
Match: AT2G38250.1 (AT2G38250.1 Homeodomain-like superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36
Identity = 109/278 (39.21%), Postives = 159/278 (57.19%), Query Frame = 1


Query: 3   SSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERG 62
           +S +A   +  QWS EET+E I IR +L++             + K LW++ S +MR++ 
Sbjct: 30  ASPVAVGDRFPQWSVEETKELIGIRGELDQTFMETK-------RNKLLWEVISNKMRDKS 89

Query: 63  FWRTAYQCKCKWKNLLSRYKGKETTHKEFG-WQCPFFEEIRAVFAVREKAMHRLLLEPEA 122
           F R+  QCKCKWKNL++R+KG ET   E    Q PF+++++ +F  R + M  L  E E 
Sbjct: 90  FPRSPEQCKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQNIFTTRMQRM--LWAESEG 149

Query: 123 GSSATKKRGRERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSKR 182
           G   T    R+R   EYS  +E  EE   EE+   SN    K +  +      R  GS  
Sbjct: 150 GGGGTSGAARKR---EYSSDEE--EENVNEELVDVSNDP--KILNPKKNIAKKRKGGS-- 209

Query: 183 SSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTE 242
           +SS+ +N + E+L+ F + Q RME EWRE  E     R   E+EWR  ME+LE+ERL  E
Sbjct: 210 NSSNSNNGVREVLEEFMRHQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAME 269

Query: 243 KAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 280
           + WR+REEQR+ R+++RA+  D+L+  LL KL R+ +L
Sbjct: 270 RMWRDREEQRRSREEMRAEKRDSLINALLAKLTRDGSL 289

[Close]

BLAST of Cp4.1LG01g01360 vs. TAIR10
Match: AT5G01380.1 (AT5G01380.1 Homeodomain-like superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 2.1e-32
Identity = 95/276 (34.42%), Postives = 152/276 (55.07%), Query Frame = 1


Query: 14  QWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           QWS EET+E + IR +L++             + K LW++ +A+M ++GF R+A QCK K
Sbjct: 51  QWSIEETKELLAIREELDQTFMETK-------RNKLLWEVVAAKMADKGFVRSAEQCKSK 110

Query: 74  WKNLLSRYKGKETTHKE-FGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKKRGRE 133
           WKNL++RYK  ETT  +    Q PF+ EI+++F  R + M    L  EA   +T  + + 
Sbjct: 111 WKNLVTRYKACETTEPDAIRQQFPFYNEIQSIFEARMQRM----LWSEATEPSTSSKRKH 170

Query: 134 RSLEEYSDLKELDE--EESEEEIPTQSNSQKGK--------AIGTQYPAKSLRTAGSKRS 193
                  + +E+DE  ++  EE+ +   +QK +        +   +  AK  +   S   
Sbjct: 171 HQFSSDDEEEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTK 230

Query: 194 SSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEK 253
           + +  N + ++L+ F +   +ME EWR+  E     R   E+EWR  M +LE ER  TE+
Sbjct: 231 AETAGNTLKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATER 290

Query: 254 AWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENN 279
            W EREE+R+ R++ RAQ  D+L+  LLN+LNR++N
Sbjct: 291 RWMEREEERRLREEARAQKRDSLIDALLNRLNRDHN 315

[Close]

BLAST of Cp4.1LG01g01360 vs. TAIR10
Match: AT5G47660.1 (AT5G47660.1 Homeodomain-like superfamily protein)

HSP 1 Score: 52.4 bits (124), Expect = 5.3e-07
Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 1


Query: 14  QWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           +W +EE +  I  R+D+E         E   + K  +WD  SARM+ERG+ R+A +CK K
Sbjct: 303 RWPQEEVQALISSRSDVE---------EKTGINKGAIWDEISARMKERGYERSAKKCKEK 362

Query: 74  WKNLLSRYK 83
           W+N+   Y+
Sbjct: 363 WENMNKYYR 362

[Close]

BLAST of Cp4.1LG01g01360 vs. TAIR10
Match: AT3G25990.1 (AT3G25990.1 Homeodomain-like superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06
Identity = 29/101 (28.71%), Postives = 51/101 (50.50%), Query Frame = 1


Query: 15  WSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCKW 74
           W+++ETR  I +R +++       +        K LW+  S +MRE+GF R+   C  KW
Sbjct: 55  WAQDETRTLISLRREMDNLFNTSKS-------NKHLWEQISKKMREKGFDRSPSMCTDKW 114

Query: 75  KNLLSRYKGKETTHKE-----FGWQCPFFEEIRAVFAVREK 111
           +N+L  +K K   H++        +  ++ EI  +F  R+K
Sbjct: 115 RNILKEFK-KAKQHEDKATSGGSTKMSYYNEIEDIFRERKK 147

[Close]

BLAST of Cp4.1LG01g01360 vs. TAIR10
Match: AT1G76880.1 (AT1G76880.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06
Identity = 32/107 (29.91%), Postives = 53/107 (49.53%), Query Frame = 1


Query: 7   AATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRT 66
           AA+A   +W + E    I++R +L+               K  LW+  SA MR  GF R 
Sbjct: 401 AASASSSRWPKVEIEALIKLRTNLDSKYQENGP-------KGPLWEEISAGMRRLGFNRN 460

Query: 67  AYQCKCKWKNLLSRYKGKETTHK---EFGWQCPFFEEIRAVFAVREK 111
           + +CK KW+N+   +K  + ++K   E    CP+F ++ A++  R K
Sbjct: 461 SKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYRERNK 500

[Close]

BLAST of Cp4.1LG01g01360 vs. NCBI nr
Match: gi|659102022|ref|XP_008451911.1| (PREDICTED: trihelix transcription factor GT-3b-like [Cucumis melo])

HSP 1 Score: 423.3 bits (1087), Expect = 3.2e-115
Identity = 226/280 (80.71%), Postives = 248/280 (88.57%), Query Frame = 1


Query: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRE 60
           MTS+AMAAT  QHQWSEEETREFIRIRADLE+DLTAVSTGE  A KKKTLW+MAS RMRE
Sbjct: 1   MTSTAMAATLHQHQWSEEETREFIRIRADLEKDLTAVSTGEAPAAKKKTLWEMASVRMRE 60

Query: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPE 120
           +GFWRTA QCKCKWKNLLSRYKGKET+HKE+GWQCPFFEEI AVF  R KAMHRLLLEPE
Sbjct: 61  KGFWRTADQCKCKWKNLLSRYKGKETSHKEYGWQCPFFEEIHAVFTERGKAMHRLLLEPE 120

Query: 121 AGSSATKKRGRERSLEEYSDLKELDEEESEEEIP-TQSNSQKGKAIGTQYPAKSLRTAGS 180
           A S +TKKRGRERSLEE+SDLKEL+E+E+EEE+  TQ NSQK KA   + PAKSL    S
Sbjct: 121 ACSISTKKRGRERSLEEHSDLKELNEDETEEEVTLTQRNSQKRKA-ARKLPAKSLGATDS 180

Query: 181 KRSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLM 240
           K SSSS+S EI E+LKGF QWQQRMEMEWREI+ERHYNNRRMLEQEWR+SMEKLERERLM
Sbjct: 181 KSSSSSISYEIQEMLKGFLQWQQRMEMEWREIVERHYNNRRMLEQEWRESMEKLERERLM 240

Query: 241 TEKAWREREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 280
            E+AWREREEQRK++QDIRA+GM+ALLT LLNKLN ENNL
Sbjct: 241 AEQAWREREEQRKEKQDIRAEGMNALLTTLLNKLNHENNL 279

[Close]

BLAST of Cp4.1LG01g01360 vs. NCBI nr
Match: gi|449462507|ref|XP_004148982.1| (PREDICTED: trihelix transcription factor GT-3b-like [Cucumis sativus])

HSP 1 Score: 418.3 bits (1074), Expect = 1.0e-113
Identity = 223/275 (81.09%), Postives = 242/275 (88.00%), Query Frame = 1


Query: 6   MAATAQQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWR 65
           MAAT  QHQWSEEETREFIRIRADLE+DL AVS GE  A KKKTLW+MAS RMRE+GFWR
Sbjct: 1   MAATPHQHQWSEEETREFIRIRADLEKDLAAVSIGEAPAAKKKTLWEMASVRMREKGFWR 60

Query: 66  TAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSA 125
           TA QCKCKWKNLLSRYKGKET+HKE+GWQCPFFEEI AVF  R KAMHRLLLEPEA S +
Sbjct: 61  TADQCKCKWKNLLSRYKGKETSHKEYGWQCPFFEEIHAVFTERGKAMHRLLLEPEACSIS 120

Query: 126 TKKRGRERSLEEYSDLKELDEEESEEEIP-TQSNSQKGKAIGTQYPAKSLRTAGSKRSSS 185
           TKKRGRERSLEE+SDLKEL+E+E+EEE+  TQSNSQK KA   + PAKSL    SK SSS
Sbjct: 121 TKKRGRERSLEEHSDLKELNEDENEEEVTFTQSNSQKRKA-ARKLPAKSLGATDSKSSSS 180

Query: 186 SVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEKAW 245
           S SNEI E+LKGFFQWQQRMEMEWREI+ERHYNNRRM EQEWR+SMEKLERERLM E+AW
Sbjct: 181 STSNEIQEMLKGFFQWQQRMEMEWREIVERHYNNRRMFEQEWRESMEKLERERLMAEQAW 240

Query: 246 REREEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 280
           REREEQRK+RQDIRA+GM+ALLT LLNKLN ENNL
Sbjct: 241 REREEQRKERQDIRAEGMNALLTTLLNKLNHENNL 274

[Close]

BLAST of Cp4.1LG01g01360 vs. NCBI nr
Match: gi|743808955|ref|XP_011018396.1| (PREDICTED: trihelix transcription factor GT-3b-like [Populus euphratica])

HSP 1 Score: 263.1 bits (671), Expect = 5.6e-67
Identity = 151/273 (55.31%), Postives = 197/273 (72.16%), Query Frame = 1


Query: 11  QQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQC 70
           QQ QW ++ET+EFI IRA+LE+D T          + KTLW++ SA+MRE+G+ RT  QC
Sbjct: 38  QQPQWGQQETKEFIGIRAELEKDFTVTK-------RNKTLWEIVSAKMREKGYRRTPEQC 97

Query: 71  KCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKKRG 130
           KCKWKNL++RYKGKET+  E G QCPFFEE+ AVF  R K M RLLLE EAGS+ ++K+ 
Sbjct: 98  KCKWKNLVNRYKGKETSDPETGRQCPFFEELHAVFTERAKNMQRLLLESEAGSTQSRKKM 157

Query: 131 R----ERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSKRSSSSV 190
           +    +RS +E+S+ ++ DE++SEEE P +SNS+K K        + +    S R+SSS 
Sbjct: 158 KRTSGDRSSDEFSEEEDEDEDDSEEEKPVRSNSRKRKV-------EKIIAEKSPRASSST 217

Query: 191 SNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEKAWRE 250
              I E+LK F Q QQ+MEM+WRE++ER  + R+M EQEWR SMEKLERERLM E+AWRE
Sbjct: 218 VGGIQEMLKEFLQQQQKMEMQWREMMERRSHERQMFEQEWRQSMEKLERERLMIEQAWRE 277

Query: 251 REEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 280
           REEQR+ R++ RA+  DALLT LLNKL RENN+
Sbjct: 278 REEQRRIREESRAERRDALLTTLLNKLIRENNV 296

[Close]

BLAST of Cp4.1LG01g01360 vs. NCBI nr
Match: gi|566146525|ref|XP_006368276.1| (hypothetical protein POPTR_0001s01210g [Populus trichocarpa])

HSP 1 Score: 261.9 bits (668), Expect = 1.3e-66
Identity = 150/273 (54.95%), Postives = 196/273 (71.79%), Query Frame = 1


Query: 11  QQHQWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQC 70
           QQ QW ++ET+EFI IRA+LE+D T          + KTLW++ S +MRE+G+ RT  QC
Sbjct: 38  QQPQWGQQETKEFIGIRAELEKDFTVTK-------RNKTLWEIVSVKMREKGYRRTPEQC 97

Query: 71  KCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKKRG 130
           KCKWKNL++RYKGKET+  E G QCPFFEE+ AVF  R K M RLLLE EAGS+ ++K+ 
Sbjct: 98  KCKWKNLVNRYKGKETSDPETGRQCPFFEELHAVFTERAKNMQRLLLESEAGSTQSRKKM 157

Query: 131 R----ERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSKRSSSSV 190
           +    +RS +E+S+ ++ DE++SEEE P +SNS+K K        + +    S R+SSS 
Sbjct: 158 KRTSGDRSSDEFSEEEDEDEDDSEEEKPVRSNSRKRKV-------EKIIAEKSPRASSST 217

Query: 191 SNEILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEKAWRE 250
              I E+LK F Q QQ+MEM+WRE++ER  + R+M EQEWR SMEKLERERLM E+AWRE
Sbjct: 218 VGGIQEMLKEFLQQQQKMEMQWREMMERRSHERQMFEQEWRQSMEKLERERLMIEQAWRE 277

Query: 251 REEQRKKRQDIRAQGMDALLTDLLNKLNRENNL 280
           REEQR+ R++ RA+  DALLT LLNKL RENN+
Sbjct: 278 REEQRRIREESRAERRDALLTTLLNKLIRENNI 296

[Close]

BLAST of Cp4.1LG01g01360 vs. NCBI nr
Match: gi|590680697|ref|XP_007040932.1| (Homeodomain-like superfamily protein [Theobroma cacao])

HSP 1 Score: 251.1 bits (640), Expect = 2.2e-63
Identity = 152/270 (56.30%), Postives = 189/270 (70.00%), Query Frame = 1


Query: 14  QWSEEETREFIRIRADLERDLTAVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           QW  EETRE I IR +LERD TA       A + KTLW++ SARMR+RG+ RT  QCKCK
Sbjct: 24  QWGPEETRELILIRGELERDFTA-------AKRNKTLWEIVSARMRDRGYIRTPDQCKCK 83

Query: 74  WKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLLEPEAGSSATKKRGR-- 133
           WKNLL+RYKGKET+  E G Q PFFEE+ AVF  R K M RLLLE EAGS+  KKR R  
Sbjct: 84  WKNLLNRYKGKETSDPENGRQFPFFEELHAVFTERAKNMQRLLLESEAGSTQAKKRMRRI 143

Query: 134 --ERSLEEYSDLKELDEEESEEEIPTQSNSQKGKAIGTQYPAKSLRTAGSKRSSSSVSNE 193
             +RS +E+S+ ++ DE+ESEEE   +S S + +        KS R   +  +SS+ S  
Sbjct: 144 SADRSSDEFSEEEDDDEDESEEERHARSISSRKRKADRVVLDKSPRP--NSGTSSTSSTG 203

Query: 194 ILELLKGFFQWQQRMEMEWREILERHYNNRRMLEQEWRDSMEKLERERLMTEKAWREREE 253
           + E+L+ FFQ QQRMEM+WRE++ER    R++ EQEWR SMEKLERERLM E+AWREREE
Sbjct: 204 LQEMLREFFQQQQRMEMQWREMMERRARERQLFEQEWRQSMEKLERERLMVEQAWREREE 263

Query: 254 QRKKRQDIRAQGMDALLTDLLNKLNRENNL 280
           QR+ R++ RA+  DALLT LLNKL  +NNL
Sbjct: 264 QRRLREESRAERRDALLTTLLNKLINDNNL 284

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g01360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TGT3B_ARATH	2.5e-35	39.21	Trihelix transcription factor GT-3b OS=Arabidopsis thaliana GN=GT-3B PE=1 SV=1	[more]
TGT3A_ARATH	3.8e-31	34.42	Trihelix transcription factor GT-3a OS=Arabidopsis thaliana GN=GT-3A PE=1 SV=1	[more]

BLAST of Cp4.1LG01g01360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV13_CUCSA	7.3e-114	81.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055350 PE=4 SV=1	[more]
U5GMR3_POPTR	8.7e-67	54.95	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s01210g PE=4 SV=1	[more]
A0A061G7N3_THECC	1.5e-63	56.30	Homeodomain-like superfamily protein OS=Theobroma cacao GN=TCM_016743 PE=4 SV=1	[more]
K7K3Z3_SOYBN	7.6e-63	56.04	Uncharacterized protein OS=Glycine max GN=GLYMA_01G150500 PE=4 SV=1	[more]
V7CJ09_PHAVU	1.3e-62	54.44	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G126400g PE=4 SV=1	[more]

BLAST of Cp4.1LG01g01360 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38250.1	1.4e-36	39.21	Homeodomain-like superfamily protein	[more]
AT5G01380.1	2.1e-32	34.42	Homeodomain-like superfamily protein	[more]
AT5G47660.1	5.3e-07	37.68	Homeodomain-like superfamily protein	[more]
AT3G25990.1	2.0e-06	28.71	Homeodomain-like superfamily protein	[more]
AT1G76880.1	2.0e-06	29.91	Duplicated homeodomain-like superfamily protein	[more]

BLAST of Cp4.1LG01g01360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102022\|ref\|XP_008451911.1\|	3.2e-115	80.71	PREDICTED: trihelix transcription factor GT-3b-like [Cucumis melo]	[more]
gi\|449462507\|ref\|XP_004148982.1\|	1.0e-113	81.09	PREDICTED: trihelix transcription factor GT-3b-like [Cucumis sativus]	[more]
gi\|743808955\|ref\|XP_011018396.1\|	5.6e-67	55.31	PREDICTED: trihelix transcription factor GT-3b-like [Populus euphratica]	[more]
gi\|566146525\|ref\|XP_006368276.1\|	1.3e-66	54.95	hypothetical protein POPTR_0001s01210g [Populus trichocarpa]	[more]
gi\|590680697\|ref\|XP_007040932.1\|	2.2e-63	56.30	Homeodomain-like superfamily protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR027775	C2H2- zinc finger protein family
IPR027759	Trihelix_TF_GT3
IPR017877	Myb-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000981	RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g01360.1	Cp4.1LG01g01360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017877	Myb-like domain	PROFILE	PS50090	MYB_LIKE	coord: 7..78 score: 6
IPR027759	Trihelix transcription factor GT3	PANTHER	PTHR10032:SF215	TRIHELIX TRANSCRIPTION FACTOR GT-3A-RELATED	coord: 14..279 score: 2.9
IPR027775	C2H2- zinc finger protein family	PANTHER	PTHR10032	ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS	coord: 14..279 score: 2.9
None	No IPR available	PFAM	PF13837	Myb_DNA-bind_4	coord: 13..103 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g01360	Cucsa.114700	Cucumber (Gy14) v1	cgycpeB0270
Cp4.1LG01g01360	CmaCh04G005830	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g01360	CmoCh04G006230	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g01360	Cla012835	Watermelon (97103) v1	cpewmB412
Cp4.1LG01g01360	Csa4G055350	Cucumber (Chinese Long) v2	cpecuB399
Cp4.1LG01g01360	MELO3C016254	Melon (DHL92) v3.5.1	cpemeB426
Cp4.1LG01g01360	ClCG07G011310	Watermelon (Charleston Gray)	cpewcgB411
Cp4.1LG01g01360	CSPI04G06680	Wild cucumber (PI 183967)	cpecpiB396
Cp4.1LG01g01360	Lsi07G007530	Bottle gourd (USVL1VR-Ls)	cpelsiB372
Cp4.1LG01g01360	MELO3C016254.2	Melon (DHL92) v3.6.1	cpemedB498
Cp4.1LG01g01360	CsaV3_4G006900	Cucumber (Chinese Long) v3	cpecucB0496
Cp4.1LG01g01360	Bhi01G002326	Wax gourd	cpewgoB0521
Cp4.1LG01g01360	CsGy4G006620	Cucumber (Gy14) v2	cgybcpeB501
Cp4.1LG01g01360	Carg13158	Silver-seed gourd	carcpeB0061

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g01360	Silver-seed gourd	carcpeB0929
Cp4.1LG01g01360	Wax gourd	cpewgoB0509
Cp4.1LG01g01360	Cucurbita pepo (Zucchini)	cpecpeB236
Cp4.1LG01g01360	Cucurbita maxima (Rimu)	cmacpeB353
Cp4.1LG01g01360	Cucurbita moschata (Rifu)	cmocpeB315