CmoCh04G006230 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G006230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Trihelix transcription factor GT-3a-like protein
Location	Cmo_Chr04 : 3097281 .. 3101154 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTAAATTAAAAGATCGCCAAATTTCAACGATTCCTTTCCTTCTTAAAGAAGCAAGCCGGAAAAGGCCGATAATGGAAAGAGGGCCTTCGTCAATCACAAATTTCCACCATTAAATTTCTCGTCGGAGTTCGCCGATGTCACCGCCGTCCACTGTTTTCACTGAAGCCGAAGCTAGAGCCCTGCAATAGTATCAACCATGACCTCGAGCGCGATGGCGGCGACGGCTCAGCAACACCAGTGGAGCGAGGAGGAGACAAGGGAGTTCATCCGGATTCGAGCCGACCTAGAGAGGGACCTGACGGTGGTTTCCACCGGAGAAGGTGCGGCGGTGAAGAAGAAGACACTGTGGGACATGGCGAGTGCAAGGATGAGAGAGCGAGGGTTTTGGAGGACCGCCTATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGGTTCGTCCAGTTTTCATTCCGTATTCATTTGAGGATTTTTTTTTTGAATCAGTCTGTTCTCCGTTATGTTTCTTTCAAGTGGGCTCCTCTGAATCTGGACTGTTCTTGCTTTGATATTTTGATTCTCGTGGATTTCGATGGGGTTCAATTTTGCCATTTATGGTTGCAAATTCTTAAAGCTAAATCTGAGAAAGGTAGTAAAATGCTGATAATGTCTCGCAACATGCGGACGAGAAAATGACAAGATGTCATAAAGTCTTTATTCAAAATAGACATGTTTTGACCTTTCAAAACTCTAGCTGCCTGTAATTGCCTGTAAGAGGAGGTTTGGAGAAAATGGTTAGAATTGAAGGGTACTGCTAAGAGGTAGCAACCATTGTTTTTGGAGATTTGTCTCTCAAAATGGCTTTCTTCAGTTCTAGGAGTACATATCAACTCAGGCACGGTGGCAAAATTGAATATCTGTCGACTACTTGTAAAAGATGCATCATTCTACTTAATTTCCTAGGTGTATGTCTTGTCAAAGTGTGTTAATGCTTCCATTTCCAGTCTTGTTTCTGTCCAATCTTCTTGGTAGGTTTATTTCCCCTGGAATCGAAGTGAGAAGAGATTCTAGAAAATCTGACTGTTCTTTAGTTTTCTCTAATAGATCTTTCTTACACAATCTCTTAATTACCTATGAATGGTCAGTCTTTCAATTCTAATCTCTTAGCTACCCCAATGGATGAAAAGCCGAAGTTGATTCCAAAAGGCTTTCTGGTTAAAATTTAATGGAATTTGGTTCTCAGATTTCATTCTGAACAAAGACCTGTCCACGTACCATAGCCAAAGACTGCATTGCGCTGCATTATCTTATCACCTTACCCTAATGAATGTGTGGCCAGCAAGAAGTTGAAGGAGATAGCCACAGAATTATTGAAAAAACTAGAAGGCAGTGATACCTTTTCCTATATTCTGATAGGCTGCATCATAGAGGGGATAAGCAGACTTCAGGCTTAGGTTTCTTTAACTTGCTATTGTTACAAGTGTTAACTTACCAAGAGCTACATGCACCAGAAAAAGAACTTGACTTTGTTTTGACACTTCAGCTTCGTGAAGATGCGGGATTCACATGATGGGAGGAGGGGTAGAAGTTAGAATTAACAAGAAGGCGATTGAAGAGGGATTTTAACTGGAGATCCCATATCGGTTGGGGAGGAGAACAAAGCATTATTTATAAAACCTTGAGGAGAAGCCCGAAAGGGAAATTTCAAAGAGGACTATTTGCTAGCGGTGCCTTTGGCCGTTACAAATGGTATCAGAGTCAGACACTAGGCGATTTGCCAATGAGGAGGTTGAGCCTCGAAGGGGGGTGGGCATGAGGCGGTGTGCCAGTTAGGACACTGGGCCTCGAAGGAGGTAGATTGGGGAGTCTCACATTGTTTGAAGAAGGGAATGAGTGCCAGCAAGGATACTGAGCCTCGAAGGGGGGTGGATTGTGAGATCCCACGTTGGTTGAGGAGGATAACAAAGCATTCTTTATAAGGGTGTAGAAACCTCTCCCTAGCAGACGTGTTTTAAAAACTTTGAGGGGAAGCTCGAAAGGGAAAACCCAAGAAGGACAATATCTGCTAGCAATGAGCTTGGACTGTTACAAATGTTATCAGAGCCAGAAACCGGGCGGTGTGTCATTGAGGACGTTGAGCTTCAAAGTAGCATGGATTGTGATATCCCACATCAAATGGAGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAAAGCGTTTTAAAAACCTTGAGGGGAAGCTCGGAAGGAAAAATCCAAAAAGGACAATAACTGCTAGCAATGAGCTTGAGCCGTTACATTAACATGTAGAAAAAAGCTTAAAAAGGACAATATTTGCTAGAAGTGAGCTTGGGCTGTTACATTAACATGTGGAAAAAAGCTCAAAGAGAATAATATTTGCTAGCAGTGAGCTTGGGCCGTTACACGTGGAAAAAAACCAGATATCTGTCATTCTAACTCTATGTTTTATCCATGAGATCAATGAACTCCTATGATAAAAACAAGCGCAGTTAATTCAGGAAGTTTCTCGTTCACTAAAGCCCATCTTAACTGAGCTTCCTGCTCTCTCTTTAAAGCACCTTCTTAAACTAAAGTTTCCAAACAAGAACTTGCAGTGCCATTACAGTTCAAACATCGAGTGTGGTCGACATTGCGAGTGAAAAATTAACCTGAACCCTTTCTTTATGTGGGAGGTTGGTCATAAGTGGCGAAACATTTAATTGCTTCCCATATATGCAGTAATTCTCGTTCATTAGTATTTGTAGAAAAGACATCTTTTACTTTTAGATCCGTTTCATGTAATTCCGACTAAACTCTTCATAGAATTCTAGTAATAAAATAGCCTAGAATTAGTTTGACTTGTCAAGTCCAATTTTGGCCCCAAAACTCAATGAGCTAAAGATACCCCTAGAAGTTGAGGCAGTTGGCATTGCTTATGTTGTTTAATCACCGTCATATGTTTCTAATTTTATAACGGTTGTACAGGGGAAGGAGACAACCCATAAAGAGTTTGGCTGGCAATGCCCATTTTTTGAGGAAATCCGTGCAGTATTTGCCGTAAGGGAGAAAGCTATGCACCGATTGCTCCATGAACCTGAAGCAGGTTCTAGTGCAACAAAGAAAAGAGGGAGGGAGAGAAGTTTAGAAGAATATTCAGAGCTCAAAGAACTTGATGAAGAAGAAAGTGAGGAGGAGATCCCAACTCAAAGCAACTCACAGAAGGGAAAGGCTATAGGAACTCACCCAGCAAAGTCTTCAAGAACAGCTGGTTCTAAAAGTTCAAGTAGCTCGGTTAGTAATGAAATCCTAGAGTTGTTGAAGGGCTTCTTTCAGTGGCAGCAGAGGATGGAAATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGACGAATGTTCGAGCAGGAATGGCGTGACTCGATGGAGAAGCTCGTGAGGGAGAGGTTAATGGCTGAGAAAGCTTGGAGGGAAAGAGAAGAACAGAGAAAGAAAAGACAAGATATCCGAGCTGAAGGAATGGATGCTCTCTTAACAGACCTTTTAAACAAGCTCAACCGTGAAAATAATTTATGAGACGATGATATAAAAAACGGTGCTGATTCCTGAGAATGGGATAGTTGAAGCAAAAAAGGAAGAATGTAGTTACAGCAACACTATTTTTGAAGGCATGGTAGATATAAAAAATTCAGGTTTCCTTTTTGCTTTGGGGTGGCTGATAGTACATATCACATATGCAATTTTTCACAAGTGTCTAGCCTGATTGTATGCATACAGAGATTGAACAGTTTTCTCCCAGGAATTTATAGTTCTTGGAAGAAAAAAGAATACATTGTTATATACATTATCAGTATTGAACAAAACCTAT

mRNA sequence

GAGTAAATTAAAAGATCGCCAAATTTCAACGATTCCTTTCCTTCTTAAAGAAGCAAGCCGGAAAAGGCCGATAATGGAAAGAGGGCCTTCGTCAATCACAAATTTCCACCATTAAATTTCTCGTCGGAGTTCGCCGATGTCACCGCCGTCCACTGTTTTCACTGAAGCCGAAGCTAGAGCCCTGCAATAGTATCAACCATGACCTCGAGCGCGATGGCGGCGACGGCTCAGCAACACCAGTGGAGCGAGGAGGAGACAAGGGAGTTCATCCGGATTCGAGCCGACCTAGAGAGGGACCTGACGGTGGTTTCCACCGGAGAAGGTGCGGCGGTGAAGAAGAAGACACTGTGGGACATGGCGAGTGCAAGGATGAGAGAGCGAGGGTTTTGGAGGACCGCCTATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGGGGAAGGAGACAACCCATAAAGAGTTTGGCTGGCAATGCCCATTTTTTGAGGAAATCCGTGCAGTATTTGCCGTAAGGGAGAAAGCTATGCACCGATTGCTCCATGAACCTGAAGCAGGTTCTAGTGCAACAAAGAAAAGAGGGAGGGAGAGAAGTTTAGAAGAATATTCAGAGCTCAAAGAACTTGATGAAGAAGAAAGTGAGGAGGAGATCCCAACTCAAAGCAACTCACAGAAGGGAAAGGCTATAGGAACTCACCCAGCAAAGTCTTCAAGAACAGCTGGTTCTAAAAGTTCAAGTAGCTCGGTTAGTAATGAAATCCTAGAGTTGTTGAAGGGCTTCTTTCAGTGGCAGCAGAGGATGGAAATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGACGAATGTTCGAGCAGGAATGGCGTGACTCGATGGAGAAGCTCGTGAGGGAGAGGTTAATGGCTGAGAAAGCTTGGAGGGAAAGAGAAGAACAGAGAAAGAAAAGACAAGATATCCGAGCTGAAGGAATGGATGCTCTCTTAACAGACCTTTTAAACAAGCTCAACCGTGAAAATAATTTATGAGACGATGATATAAAAAACGGTGCTGATTCCTGAGAATGGGATAGTTGAAGCAAAAAAGGAAGAATGTAGTTACAGCAACACTATTTTTGAAGGCATGGTAGATATAAAAAATTCAGGTTTCCTTTTTGCTTTGGGGTGGCTGATAGTACATATCACATATGCAATTTTTCACAAGTGTCTAGCCTGATTGTATGCATACAGAGATTGAACAGTTTTCTCCCAGGAATTTATAGTTCTTGGAAGAAAAAAGAATACATTGTTATATACATTATCAGTATTGAACAAAACCTAT

Coding sequence (CDS)

ATGACCTCGAGCGCGATGGCGGCGACGGCTCAGCAACACCAGTGGAGCGAGGAGGAGACAAGGGAGTTCATCCGGATTCGAGCCGACCTAGAGAGGGACCTGACGGTGGTTTCCACCGGAGAAGGTGCGGCGGTGAAGAAGAAGACACTGTGGGACATGGCGAGTGCAAGGATGAGAGAGCGAGGGTTTTGGAGGACCGCCTATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGGGGAAGGAGACAACCCATAAAGAGTTTGGCTGGCAATGCCCATTTTTTGAGGAAATCCGTGCAGTATTTGCCGTAAGGGAGAAAGCTATGCACCGATTGCTCCATGAACCTGAAGCAGGTTCTAGTGCAACAAAGAAAAGAGGGAGGGAGAGAAGTTTAGAAGAATATTCAGAGCTCAAAGAACTTGATGAAGAAGAAAGTGAGGAGGAGATCCCAACTCAAAGCAACTCACAGAAGGGAAAGGCTATAGGAACTCACCCAGCAAAGTCTTCAAGAACAGCTGGTTCTAAAAGTTCAAGTAGCTCGGTTAGTAATGAAATCCTAGAGTTGTTGAAGGGCTTCTTTCAGTGGCAGCAGAGGATGGAAATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGACGAATGTTCGAGCAGGAATGGCGTGACTCGATGGAGAAGCTCGTGAGGGAGAGGTTAATGGCTGAGAAAGCTTGGAGGGAAAGAGAAGAACAGAGAAAGAAAAGACAAGATATCCGAGCTGAAGGAATGGATGCTCTCTTAACAGACCTTTTAAACAAGCTCAACCGTGAAAATAATTTATGA

Homology

[Close]

BLAST of CmoCh04G006230 vs. Swiss-Prot
Match: TGT3B_ARATH (Trihelix transcription factor GT-3b OS=Arabidopsis thaliana GN=GT-3B PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.3e-35
Identity = 115/277 (41.52%), Postives = 161/277 (58.12%), Query Frame = 1


Query: 3   SSAMAATAQQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERG 62
           +S +A   +  QWS EET+E I IR +L  D T + T      + K LW++ S +MR++ 
Sbjct: 30  ASPVAVGDRFPQWSVEETKELIGIRGEL--DQTFMETK-----RNKLLWEVISNKMRDKS 89

Query: 63  FWRTAYQCKCKWKNLLSRYKGKETTHKEFG-WQCPFFEEIRAVFAVREKAMHRLLHEPEA 122
           F R+  QCKCKWKNL++R+KG ET   E    Q PF+++++ +F  R + M  L  E E 
Sbjct: 90  FPRSPEQCKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQNIFTTRMQRM--LWAESEG 149

Query: 123 GSSATKKRGRERSLEEYSELKELDEEESEEEIPTQSNSQKGKAIGTHPAKSSRTAGSKSS 182
           G   T    R+R   EYS  +E  EE   EE+   SN  K      + AK  R  GS SS
Sbjct: 150 GGGGTSGAARKR---EYSSDEE--EENVNEELVDVSNDPKILNPKKNIAKK-RKGGSNSS 209

Query: 183 SSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEK 242
           +S+  N + E+L+ F + Q RME EWRE  E     R   E+EWR  ME+L +ERL  E+
Sbjct: 210 NSN--NGVREVLEEFMRHQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAMER 269

Query: 243 AWREREEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 279
            WR+REEQR+ R+++RAE  D+L+  LL KL R+ +L
Sbjct: 270 MWRDREEQRRSREEMRAEKRDSLINALLAKLTRDGSL 289

[Close]

BLAST of CmoCh04G006230 vs. Swiss-Prot
Match: TGT3A_ARATH (Trihelix transcription factor GT-3a OS=Arabidopsis thaliana GN=GT-3A PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.5e-31
Identity = 96/274 (35.04%), Postives = 157/274 (57.30%), Query Frame = 1


Query: 14  QWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           QWS EET+E + IR +L  D T + T      + K LW++ +A+M ++GF R+A QCK K
Sbjct: 51  QWSIEETKELLAIREEL--DQTFMETK-----RNKLLWEVVAAKMADKGFVRSAEQCKSK 110

Query: 74  WKNLLSRYKGKETTHKE-FGWQCPFFEEIRAVFAVREKAMHRLLHEPEAGSSATKKRGRE 133
           WKNL++RYK  ETT  +    Q PF+ EI+++F  R + M  L  E    S+++K++  +
Sbjct: 111 WKNLVTRYKACETTEPDAIRQQFPFYNEIQSIFEARMQRM--LWSEATEPSTSSKRKHHQ 170

Query: 134 RSLEEYSELKELDEEESEEEIPTQSNSQKGK------AIGTHP---AKSSRTAGSKSSSS 193
            S ++  E  +   ++  EE+ +   +QK +      +  T+P   AK  +   S + + 
Sbjct: 171 FSSDDEEEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTKAE 230

Query: 194 SVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEKAW 253
           +  N + ++L+ F +   +ME EWR+  E     R   E+EWR  M +L  ER   E+ W
Sbjct: 231 TAGNTLKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATERRW 290

Query: 254 REREEQRKKRQDIRAEGMDALLTDLLNKLNRENN 278
            EREE+R+ R++ RA+  D+L+  LLN+LNR++N
Sbjct: 291 MEREEERRLREEARAQKRDSLIDALLNRLNRDHN 315

[Close]

BLAST of CmoCh04G006230 vs. TrEMBL
Match: A0A0A0KV13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055350 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 3.6e-113
Identity = 222/274 (81.02%), Postives = 240/274 (87.59%), Query Frame = 1


Query: 6   MAATAQQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWR 65
           MAAT  QHQWSEEETREFIRIRADLE+DL  VS GE  A KKKTLW+MAS RMRE+GFWR
Sbjct: 1   MAATPHQHQWSEEETREFIRIRADLEKDLAAVSIGEAPAAKKKTLWEMASVRMREKGFWR 60

Query: 66  TAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPEAGSSA 125
           TA QCKCKWKNLLSRYKGKET+HKE+GWQCPFFEEI AVF  R KAMHRLL EPEA S +
Sbjct: 61  TADQCKCKWKNLLSRYKGKETSHKEYGWQCPFFEEIHAVFTERGKAMHRLLLEPEACSIS 120

Query: 126 TKKRGRERSLEEYSELKELDEEESEEEIP-TQSNSQKGKAIGTHPAKSSRTAGSKSSSSS 185
           TKKRGRERSLEE+S+LKEL+E+E+EEE+  TQSNSQK KA    PAKS     SKSSSSS
Sbjct: 121 TKKRGRERSLEEHSDLKELNEDENEEEVTFTQSNSQKRKAARKLPAKSLGATDSKSSSSS 180

Query: 186 VSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEKAWR 245
            SNEI E+LKGFFQWQQRMEMEWREI+ERHYNNRRMFEQEWR+SMEKL RERLMAE+AWR
Sbjct: 181 TSNEIQEMLKGFFQWQQRMEMEWREIVERHYNNRRMFEQEWRESMEKLERERLMAEQAWR 240

Query: 246 EREEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 279
           EREEQRK+RQDIRAEGM+ALLT LLNKLN ENNL
Sbjct: 241 EREEQRKERQDIRAEGMNALLTTLLNKLNHENNL 274

[Close]

BLAST of CmoCh04G006230 vs. TrEMBL
Match: U5GMR3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s01210g PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.7e-67
Identity = 153/272 (56.25%), Postives = 195/272 (71.69%), Query Frame = 1


Query: 11  QQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQC 70
           QQ QW ++ET+EFI IRA+LE+D TV         + KTLW++ S +MRE+G+ RT  QC
Sbjct: 38  QQPQWGQQETKEFIGIRAELEKDFTVTK-------RNKTLWEIVSVKMREKGYRRTPEQC 97

Query: 71  KCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPEAGSSATKKRG 130
           KCKWKNL++RYKGKET+  E G QCPFFEE+ AVF  R K M RLL E EAGS+ ++K+ 
Sbjct: 98  KCKWKNLVNRYKGKETSDPETGRQCPFFEELHAVFTERAKNMQRLLLESEAGSTQSRKKM 157

Query: 131 R----ERSLEEYSELKELDEEESEEEIPTQSNSQKGKAIGTHPAKSSRTAGSKSSSSSVS 190
           +    +RS +E+SE ++ DE++SEEE P +SNS+K K       KS R      +SSS  
Sbjct: 158 KRTSGDRSSDEFSEEEDEDEDDSEEEKPVRSNSRKRKVEKIIAEKSPR------ASSSTV 217

Query: 191 NEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEKAWRER 250
             I E+LK F Q QQ+MEM+WRE++ER  + R+MFEQEWR SMEKL RERLM E+AWRER
Sbjct: 218 GGIQEMLKEFLQQQQKMEMQWREMMERRSHERQMFEQEWRQSMEKLERERLMIEQAWRER 277

Query: 251 EEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 279
           EEQR+ R++ RAE  DALLT LLNKL RENN+
Sbjct: 278 EEQRRIREESRAERRDALLTTLLNKLIRENNI 296

[Close]

BLAST of CmoCh04G006230 vs. TrEMBL
Match: K7K3Z3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G150500 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.1e-64
Identity = 155/270 (57.41%), Postives = 191/270 (70.74%), Query Frame = 1


Query: 12  QHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCK 71
           Q QWS++ETREFI IRA+LERD T       A+ + KTLW++ SA+MRERGF R+  QCK
Sbjct: 47  QPQWSQQETREFIAIRAELERDFT-------ASKRNKTLWEVVSAKMRERGFRRSPEQCK 106

Query: 72  CKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPEAGSSATKKRGR 131
           CKWKNL++RYKGKET+  E G QCPFFEE+ AVF  R   M RLL E E  S+ TKK  +
Sbjct: 107 CKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVK 166

Query: 132 ----ERSLEEYSELKELDEEESEEEIPTQSNSQKGKAIGTHPAKSSRTAGSKSSSSSVSN 191
               +RS EE SE     E +SEEE P++SN++K K       KSSR A + S+S+S S 
Sbjct: 167 RSSGDRSSEELSEDDNEVEYDSEEEKPSRSNTRKRKVDKVGVEKSSR-ASNPSNSASNST 226

Query: 192 EILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEKAWRERE 251
            I E+LK FFQ Q  MEM+WRE++ER  + R++FEQEWR SMEKL RERLM E+AWRERE
Sbjct: 227 SIQEMLKEFFQHQLSMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQAWRERE 286

Query: 252 EQRKKRQDIRAEGMDALLTDLLNKLNRENN 278
           EQR+ R++ RAE  DALLT LLNKL  E+N
Sbjct: 287 EQRRMREESRAERRDALLTTLLNKLINESN 308

[Close]

BLAST of CmoCh04G006230 vs. TrEMBL
Match: A0A061G7N3_THECC (Homeodomain-like superfamily protein OS=Theobroma cacao GN=TCM_016743 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 5.3e-64
Identity = 157/270 (58.15%), Postives = 190/270 (70.37%), Query Frame = 1


Query: 14  QWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           QW  EETRE I IR +LERD T       AA + KTLW++ SARMR+RG+ RT  QCKCK
Sbjct: 24  QWGPEETRELILIRGELERDFT-------AAKRNKTLWEIVSARMRDRGYIRTPDQCKCK 83

Query: 74  WKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPEAGSSATKKRGR-- 133
           WKNLL+RYKGKET+  E G Q PFFEE+ AVF  R K M RLL E EAGS+  KKR R  
Sbjct: 84  WKNLLNRYKGKETSDPENGRQFPFFEELHAVFTERAKNMQRLLLESEAGSTQAKKRMRRI 143

Query: 134 --ERSLEEYSELKELDEEESEEEIPTQS-NSQKGKAIGTHPAKSSRTAGSKSSSSSVSNE 193
             +RS +E+SE ++ DE+ESEEE   +S +S+K KA      KS R     SS+SS    
Sbjct: 144 SADRSSDEFSEEEDDDEDESEEERHARSISSRKRKADRVVLDKSPRPNSGTSSTSSTG-- 203

Query: 194 ILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEKAWREREE 253
           + E+L+ FFQ QQRMEM+WRE++ER    R++FEQEWR SMEKL RERLM E+AWREREE
Sbjct: 204 LQEMLREFFQQQQRMEMQWREMMERRARERQLFEQEWRQSMEKLERERLMVEQAWREREE 263

Query: 254 QRKKRQDIRAEGMDALLTDLLNKLNRENNL 279
           QR+ R++ RAE  DALLT LLNKL  +NNL
Sbjct: 264 QRRLREESRAERRDALLTTLLNKLINDNNL 284

[Close]

BLAST of CmoCh04G006230 vs. TrEMBL
Match: A0A151RUB7_CAJCA (Zinc finger and SCAN domain-containing protein 29 OS=Cajanus cajan GN=KK1_032304 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.0e-63
Identity = 150/270 (55.56%), Postives = 189/270 (70.00%), Query Frame = 1


Query: 12  QHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCK 71
           Q QWS++ETREFI IRA+LE+D T       A+ + KTLW++ S++MRERGF R+  QCK
Sbjct: 14  QPQWSQQETREFIAIRAELEKDFT-------ASKRNKTLWEVVSSKMRERGFRRSPEQCK 73

Query: 72  CKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPEAGSSATKKRGR 131
           CKWKNL++RYKGKET+  E G QCPFFEE+ AVF  R   M RLL E E  S+ TKK  +
Sbjct: 74  CKWKNLVNRYKGKETSDPEHGRQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVK 133

Query: 132 ----ERSLEEYSELKELDEEESEEEIPTQSNSQKGKAIGTHPAKSSRTAGSKSSSSSVSN 191
               +RS EE SE  +  E +SEEE P++SN++K K       KSSR     +  S+ ++
Sbjct: 134 RSSVDRSSEELSEDDDEVEYDSEEEKPSRSNTRKRKVDKVGMEKSSRANNPSNVVSNSTS 193

Query: 192 EILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEKAWRERE 251
            I E+LK FFQ Q RMEM+WRE++ER    R++FEQEWR SMEKL RERLM E+AWRERE
Sbjct: 194 SIQEMLKEFFQHQLRMEMQWREMMERRAQERQLFEQEWRQSMEKLERERLMIEQAWRERE 253

Query: 252 EQRKKRQDIRAEGMDALLTDLLNKLNRENN 278
           EQR+ R++ RAE  DALLT LLNKL  E+N
Sbjct: 254 EQRRMREESRAERRDALLTTLLNKLINESN 276

[Close]

BLAST of CmoCh04G006230 vs. TAIR10
Match: AT2G38250.1 (AT2G38250.1 Homeodomain-like superfamily protein)

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-36
Identity = 115/277 (41.52%), Postives = 161/277 (58.12%), Query Frame = 1


Query: 3   SSAMAATAQQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERG 62
           +S +A   +  QWS EET+E I IR +L  D T + T      + K LW++ S +MR++ 
Sbjct: 30  ASPVAVGDRFPQWSVEETKELIGIRGEL--DQTFMETK-----RNKLLWEVISNKMRDKS 89

Query: 63  FWRTAYQCKCKWKNLLSRYKGKETTHKEFG-WQCPFFEEIRAVFAVREKAMHRLLHEPEA 122
           F R+  QCKCKWKNL++R+KG ET   E    Q PF+++++ +F  R + M  L  E E 
Sbjct: 90  FPRSPEQCKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQNIFTTRMQRM--LWAESEG 149

Query: 123 GSSATKKRGRERSLEEYSELKELDEEESEEEIPTQSNSQKGKAIGTHPAKSSRTAGSKSS 182
           G   T    R+R   EYS  +E  EE   EE+   SN  K      + AK  R  GS SS
Sbjct: 150 GGGGTSGAARKR---EYSSDEE--EENVNEELVDVSNDPKILNPKKNIAKK-RKGGSNSS 209

Query: 183 SSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEK 242
           +S+  N + E+L+ F + Q RME EWRE  E     R   E+EWR  ME+L +ERL  E+
Sbjct: 210 NSN--NGVREVLEEFMRHQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAMER 269

Query: 243 AWREREEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 279
            WR+REEQR+ R+++RAE  D+L+  LL KL R+ +L
Sbjct: 270 MWRDREEQRRSREEMRAEKRDSLINALLAKLTRDGSL 289

[Close]

BLAST of CmoCh04G006230 vs. TAIR10
Match: AT5G01380.1 (AT5G01380.1 Homeodomain-like superfamily protein)

HSP 1 Score: 136.0 bits (341), Expect = 3.6e-32
Identity = 96/274 (35.04%), Postives = 157/274 (57.30%), Query Frame = 1


Query: 14  QWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           QWS EET+E + IR +L  D T + T      + K LW++ +A+M ++GF R+A QCK K
Sbjct: 51  QWSIEETKELLAIREEL--DQTFMETK-----RNKLLWEVVAAKMADKGFVRSAEQCKSK 110

Query: 74  WKNLLSRYKGKETTHKE-FGWQCPFFEEIRAVFAVREKAMHRLLHEPEAGSSATKKRGRE 133
           WKNL++RYK  ETT  +    Q PF+ EI+++F  R + M  L  E    S+++K++  +
Sbjct: 111 WKNLVTRYKACETTEPDAIRQQFPFYNEIQSIFEARMQRM--LWSEATEPSTSSKRKHHQ 170

Query: 134 RSLEEYSELKELDEEESEEEIPTQSNSQKGK------AIGTHP---AKSSRTAGSKSSSS 193
            S ++  E  +   ++  EE+ +   +QK +      +  T+P   AK  +   S + + 
Sbjct: 171 FSSDDEEEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTKAE 230

Query: 194 SVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEKAW 253
           +  N + ++L+ F +   +ME EWR+  E     R   E+EWR  M +L  ER   E+ W
Sbjct: 231 TAGNTLKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATERRW 290

Query: 254 REREEQRKKRQDIRAEGMDALLTDLLNKLNRENN 278
            EREE+R+ R++ RA+  D+L+  LLN+LNR++N
Sbjct: 291 MEREEERRLREEARAQKRDSLIDALLNRLNRDHN 315

[Close]

BLAST of CmoCh04G006230 vs. TAIR10
Match: AT5G47660.1 (AT5G47660.1 Homeodomain-like superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 4.1e-07
Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 1


Query: 14  QWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCK 73
           +W +EE +  I  R+D+E         E   + K  +WD  SARM+ERG+ R+A +CK K
Sbjct: 303 RWPQEEVQALISSRSDVE---------EKTGINKGAIWDEISARMKERGYERSAKKCKEK 362

Query: 74  WKNLLSRYK 83
           W+N+   Y+
Sbjct: 363 WENMNKYYR 362

[Close]

BLAST of CmoCh04G006230 vs. TAIR10
Match: AT3G25990.1 (AT3G25990.1 Homeodomain-like superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 9.0e-07
Identity = 30/101 (29.70%), Postives = 54/101 (53.47%), Query Frame = 1


Query: 15  WSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCKCKW 74
           W+++ETR  I +R +++    + +T +      K LW+  S +MRE+GF R+   C  KW
Sbjct: 55  WAQDETRTLISLRREMDN---LFNTSKS----NKHLWEQISKKMREKGFDRSPSMCTDKW 114

Query: 75  KNLLSRYKGKETTHKE-----FGWQCPFFEEIRAVFAVREK 111
           +N+L  +K K   H++        +  ++ EI  +F  R+K
Sbjct: 115 RNILKEFK-KAKQHEDKATSGGSTKMSYYNEIEDIFRERKK 147

[Close]

BLAST of CmoCh04G006230 vs. TAIR10
Match: AT1G76880.1 (AT1G76880.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 9.0e-07
Identity = 34/107 (31.78%), Postives = 54/107 (50.47%), Query Frame = 1


Query: 7   AATAQQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWRT 66
           AA+A   +W + E    I++R +L  D      G      K  LW+  SA MR  GF R 
Sbjct: 401 AASASSSRWPKVEIEALIKLRTNL--DSKYQENGP-----KGPLWEEISAGMRRLGFNRN 460

Query: 67  AYQCKCKWKNLLSRYKGKETTHK---EFGWQCPFFEEIRAVFAVREK 111
           + +CK KW+N+   +K  + ++K   E    CP+F ++ A++  R K
Sbjct: 461 SKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYRERNK 500

[Close]

BLAST of CmoCh04G006230 vs. NCBI nr
Match: gi|659102022|ref|XP_008451911.1| (PREDICTED: trihelix transcription factor GT-3b-like [Cucumis melo])

HSP 1 Score: 417.5 bits (1072), Expect = 1.8e-113
Identity = 223/279 (79.93%), Postives = 244/279 (87.46%), Query Frame = 1


Query: 1   MTSSAMAATAQQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRE 60
           MTS+AMAAT  QHQWSEEETREFIRIRADLE+DLT VSTGE  A KKKTLW+MAS RMRE
Sbjct: 1   MTSTAMAATLHQHQWSEEETREFIRIRADLEKDLTAVSTGEAPAAKKKTLWEMASVRMRE 60

Query: 61  RGFWRTAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPE 120
           +GFWRTA QCKCKWKNLLSRYKGKET+HKE+GWQCPFFEEI AVF  R KAMHRLL EPE
Sbjct: 61  KGFWRTADQCKCKWKNLLSRYKGKETSHKEYGWQCPFFEEIHAVFTERGKAMHRLLLEPE 120

Query: 121 AGSSATKKRGRERSLEEYSELKELDEEESEEEIP-TQSNSQKGKAIGTHPAKSSRTAGSK 180
           A S +TKKRGRERSLEE+S+LKEL+E+E+EEE+  TQ NSQK KA    PAKS     SK
Sbjct: 121 ACSISTKKRGRERSLEEHSDLKELNEDETEEEVTLTQRNSQKRKAARKLPAKSLGATDSK 180

Query: 181 SSSSSVSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMA 240
           SSSSS+S EI E+LKGF QWQQRMEMEWREI+ERHYNNRRM EQEWR+SMEKL RERLMA
Sbjct: 181 SSSSSISYEIQEMLKGFLQWQQRMEMEWREIVERHYNNRRMLEQEWRESMEKLERERLMA 240

Query: 241 EKAWREREEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 279
           E+AWREREEQRK++QDIRAEGM+ALLT LLNKLN ENNL
Sbjct: 241 EQAWREREEQRKEKQDIRAEGMNALLTTLLNKLNHENNL 279

[Close]

BLAST of CmoCh04G006230 vs. NCBI nr
Match: gi|449462507|ref|XP_004148982.1| (PREDICTED: trihelix transcription factor GT-3b-like [Cucumis sativus])

HSP 1 Score: 416.0 bits (1068), Expect = 5.2e-113
Identity = 222/274 (81.02%), Postives = 240/274 (87.59%), Query Frame = 1


Query: 6   MAATAQQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWR 65
           MAAT  QHQWSEEETREFIRIRADLE+DL  VS GE  A KKKTLW+MAS RMRE+GFWR
Sbjct: 1   MAATPHQHQWSEEETREFIRIRADLEKDLAAVSIGEAPAAKKKTLWEMASVRMREKGFWR 60

Query: 66  TAYQCKCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPEAGSSA 125
           TA QCKCKWKNLLSRYKGKET+HKE+GWQCPFFEEI AVF  R KAMHRLL EPEA S +
Sbjct: 61  TADQCKCKWKNLLSRYKGKETSHKEYGWQCPFFEEIHAVFTERGKAMHRLLLEPEACSIS 120

Query: 126 TKKRGRERSLEEYSELKELDEEESEEEIP-TQSNSQKGKAIGTHPAKSSRTAGSKSSSSS 185
           TKKRGRERSLEE+S+LKEL+E+E+EEE+  TQSNSQK KA    PAKS     SKSSSSS
Sbjct: 121 TKKRGRERSLEEHSDLKELNEDENEEEVTFTQSNSQKRKAARKLPAKSLGATDSKSSSSS 180

Query: 186 VSNEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEKAWR 245
            SNEI E+LKGFFQWQQRMEMEWREI+ERHYNNRRMFEQEWR+SMEKL RERLMAE+AWR
Sbjct: 181 TSNEIQEMLKGFFQWQQRMEMEWREIVERHYNNRRMFEQEWRESMEKLERERLMAEQAWR 240

Query: 246 EREEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 279
           EREEQRK+RQDIRAEGM+ALLT LLNKLN ENNL
Sbjct: 241 EREEQRKERQDIRAEGMNALLTTLLNKLNHENNL 274

[Close]

BLAST of CmoCh04G006230 vs. NCBI nr
Match: gi|743808955|ref|XP_011018396.1| (PREDICTED: trihelix transcription factor GT-3b-like [Populus euphratica])

HSP 1 Score: 263.1 bits (671), Expect = 5.6e-67
Identity = 154/272 (56.62%), Postives = 196/272 (72.06%), Query Frame = 1


Query: 11  QQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQC 70
           QQ QW ++ET+EFI IRA+LE+D TV         + KTLW++ SA+MRE+G+ RT  QC
Sbjct: 38  QQPQWGQQETKEFIGIRAELEKDFTVTK-------RNKTLWEIVSAKMREKGYRRTPEQC 97

Query: 71  KCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPEAGSSATKKRG 130
           KCKWKNL++RYKGKET+  E G QCPFFEE+ AVF  R K M RLL E EAGS+ ++K+ 
Sbjct: 98  KCKWKNLVNRYKGKETSDPETGRQCPFFEELHAVFTERAKNMQRLLLESEAGSTQSRKKM 157

Query: 131 R----ERSLEEYSELKELDEEESEEEIPTQSNSQKGKAIGTHPAKSSRTAGSKSSSSSVS 190
           +    +RS +E+SE ++ DE++SEEE P +SNS+K K       KS R      +SSS  
Sbjct: 158 KRTSGDRSSDEFSEEEDEDEDDSEEEKPVRSNSRKRKVEKIIAEKSPR------ASSSTV 217

Query: 191 NEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEKAWRER 250
             I E+LK F Q QQ+MEM+WRE++ER  + R+MFEQEWR SMEKL RERLM E+AWRER
Sbjct: 218 GGIQEMLKEFLQQQQKMEMQWREMMERRSHERQMFEQEWRQSMEKLERERLMIEQAWRER 277

Query: 251 EEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 279
           EEQR+ R++ RAE  DALLT LLNKL RENN+
Sbjct: 278 EEQRRIREESRAERRDALLTTLLNKLIRENNV 296

[Close]

BLAST of CmoCh04G006230 vs. NCBI nr
Match: gi|566146525|ref|XP_006368276.1| (hypothetical protein POPTR_0001s01210g [Populus trichocarpa])

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66
Identity = 153/272 (56.25%), Postives = 195/272 (71.69%), Query Frame = 1


Query: 11  QQHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQC 70
           QQ QW ++ET+EFI IRA+LE+D TV         + KTLW++ S +MRE+G+ RT  QC
Sbjct: 38  QQPQWGQQETKEFIGIRAELEKDFTVTK-------RNKTLWEIVSVKMREKGYRRTPEQC 97

Query: 71  KCKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPEAGSSATKKRG 130
           KCKWKNL++RYKGKET+  E G QCPFFEE+ AVF  R K M RLL E EAGS+ ++K+ 
Sbjct: 98  KCKWKNLVNRYKGKETSDPETGRQCPFFEELHAVFTERAKNMQRLLLESEAGSTQSRKKM 157

Query: 131 R----ERSLEEYSELKELDEEESEEEIPTQSNSQKGKAIGTHPAKSSRTAGSKSSSSSVS 190
           +    +RS +E+SE ++ DE++SEEE P +SNS+K K       KS R      +SSS  
Sbjct: 158 KRTSGDRSSDEFSEEEDEDEDDSEEEKPVRSNSRKRKVEKIIAEKSPR------ASSSTV 217

Query: 191 NEILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEKAWRER 250
             I E+LK F Q QQ+MEM+WRE++ER  + R+MFEQEWR SMEKL RERLM E+AWRER
Sbjct: 218 GGIQEMLKEFLQQQQKMEMQWREMMERRSHERQMFEQEWRQSMEKLERERLMIEQAWRER 277

Query: 251 EEQRKKRQDIRAEGMDALLTDLLNKLNRENNL 279
           EEQR+ R++ RAE  DALLT LLNKL RENN+
Sbjct: 278 EEQRRIREESRAERRDALLTTLLNKLIRENNI 296

[Close]

BLAST of CmoCh04G006230 vs. NCBI nr
Match: gi|356495258|ref|XP_003516496.1| (PREDICTED: trihelix transcription factor GT-3b-like [Glycine max])

HSP 1 Score: 253.4 bits (646), Expect = 4.4e-64
Identity = 155/270 (57.41%), Postives = 191/270 (70.74%), Query Frame = 1


Query: 12  QHQWSEEETREFIRIRADLERDLTVVSTGEGAAVKKKTLWDMASARMRERGFWRTAYQCK 71
           Q QWS++ETREFI IRA+LERD T       A+ + KTLW++ SA+MRERGF R+  QCK
Sbjct: 47  QPQWSQQETREFIAIRAELERDFT-------ASKRNKTLWEVVSAKMRERGFRRSPEQCK 106

Query: 72  CKWKNLLSRYKGKETTHKEFGWQCPFFEEIRAVFAVREKAMHRLLHEPEAGSSATKKRGR 131
           CKWKNL++RYKGKET+  E G QCPFFEE+ AVF  R   M RLL E E  S+ TKK  +
Sbjct: 107 CKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVK 166

Query: 132 ----ERSLEEYSELKELDEEESEEEIPTQSNSQKGKAIGTHPAKSSRTAGSKSSSSSVSN 191
               +RS EE SE     E +SEEE P++SN++K K       KSSR A + S+S+S S 
Sbjct: 167 RSSGDRSSEELSEDDNEVEYDSEEEKPSRSNTRKRKVDKVGVEKSSR-ASNPSNSASNST 226

Query: 192 EILELLKGFFQWQQRMEMEWREILERHYNNRRMFEQEWRDSMEKLVRERLMAEKAWRERE 251
            I E+LK FFQ Q  MEM+WRE++ER  + R++FEQEWR SMEKL RERLM E+AWRERE
Sbjct: 227 SIQEMLKEFFQHQLSMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQAWRERE 286

Query: 252 EQRKKRQDIRAEGMDALLTDLLNKLNRENN 278
           EQR+ R++ RAE  DALLT LLNKL  E+N
Sbjct: 287 EQRRMREESRAERRDALLTTLLNKLINESN 308

The following BLAST results are available for this feature:

BLAST of CmoCh04G006230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TGT3B_ARATH	3.3e-35	41.52	Trihelix transcription factor GT-3b OS=Arabidopsis thaliana GN=GT-3B PE=1 SV=1	[more]
TGT3A_ARATH	6.5e-31	35.04	Trihelix transcription factor GT-3a OS=Arabidopsis thaliana GN=GT-3A PE=1 SV=1	[more]

BLAST of CmoCh04G006230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV13_CUCSA	3.6e-113	81.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055350 PE=4 SV=1	[more]
U5GMR3_POPTR	8.7e-67	56.25	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s01210g PE=4 SV=1	[more]
K7K3Z3_SOYBN	3.1e-64	57.41	Uncharacterized protein OS=Glycine max GN=GLYMA_01G150500 PE=4 SV=1	[more]
A0A061G7N3_THECC	5.3e-64	58.15	Homeodomain-like superfamily protein OS=Theobroma cacao GN=TCM_016743 PE=4 SV=1	[more]
A0A151RUB7_CAJCA	2.0e-63	55.56	Zinc finger and SCAN domain-containing protein 29 OS=Cajanus cajan GN=KK1_032304...	[more]

BLAST of CmoCh04G006230 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G38250.1	1.9e-36	41.52	Homeodomain-like superfamily protein	[more]
AT5G01380.1	3.6e-32	35.04	Homeodomain-like superfamily protein	[more]
AT5G47660.1	4.1e-07	37.68	Homeodomain-like superfamily protein	[more]
AT3G25990.1	9.0e-07	29.70	Homeodomain-like superfamily protein	[more]
AT1G76880.1	9.0e-07	31.78	Duplicated homeodomain-like superfamily protein	[more]

BLAST of CmoCh04G006230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102022\|ref\|XP_008451911.1\|	1.8e-113	79.93	PREDICTED: trihelix transcription factor GT-3b-like [Cucumis melo]	[more]
gi\|449462507\|ref\|XP_004148982.1\|	5.2e-113	81.02	PREDICTED: trihelix transcription factor GT-3b-like [Cucumis sativus]	[more]
gi\|743808955\|ref\|XP_011018396.1\|	5.6e-67	56.62	PREDICTED: trihelix transcription factor GT-3b-like [Populus euphratica]	[more]
gi\|566146525\|ref\|XP_006368276.1\|	1.2e-66	56.25	hypothetical protein POPTR_0001s01210g [Populus trichocarpa]	[more]
gi\|356495258\|ref\|XP_003516496.1\|	4.4e-64	57.41	PREDICTED: trihelix transcription factor GT-3b-like [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017877	Myb-like_dom
IPR027759	Trihelix_TF_GT3
IPR027775	C2H2- zinc finger protein family

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated
GO:0006351	transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000981	RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G006230.1	CmoCh04G006230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017877	Myb-like domain	PROFILE	PS50090	MYB_LIKE	coord: 7..78 score: 6
IPR027759	Trihelix transcription factor GT3	PANTHER	PTHR10032:SF215	TRIHELIX TRANSCRIPTION FACTOR GT-3A-RELATED	coord: 14..278 score: 5.1
IPR027775	C2H2- zinc finger protein family	PANTHER	PTHR10032	ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS	coord: 14..278 score: 5.1
None	No IPR available	PFAM	PF13837	Myb_DNA-bind_4	coord: 13..103 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G006230	Cucsa.114700	Cucumber (Gy14) v1	cgycmoB0276
CmoCh04G006230	CmaCh04G005830	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G006230	Cla012835	Watermelon (97103) v1	cmowmB676
CmoCh04G006230	Csa4G055350	Cucumber (Chinese Long) v2	cmocuB699
CmoCh04G006230	MELO3C016254	Melon (DHL92) v3.5.1	cmomeB697
CmoCh04G006230	ClCG07G011310	Watermelon (Charleston Gray)	cmowcgB677
CmoCh04G006230	CSPI04G06680	Wild cucumber (PI 183967)	cmocpiB707
CmoCh04G006230	Lsi07G007530	Bottle gourd (USVL1VR-Ls)	cmolsiB689
CmoCh04G006230	Cp4.1LG01g01360	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G006230	MELO3C016254.2	Melon (DHL92) v3.6.1	cmomedB791
CmoCh04G006230	CsaV3_4G006900	Cucumber (Chinese Long) v3	cmocucB0827
CmoCh04G006230	Cla97C07G138080	Watermelon (97103) v2	cmowmbB756
CmoCh04G006230	Bhi01G002326	Wax gourd	cmowgoB0854
CmoCh04G006230	CsGy4G006620	Cucumber (Gy14) v2	cgybcmoB515
CmoCh04G006230	Carg13158	Silver-seed gourd	carcmoB0058

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G006230	Silver-seed gourd	carcmoB0902
CmoCh04G006230	Wax gourd	cmowgoB0844
CmoCh04G006230	Cucurbita moschata (Rifu)	cmocmoB288
CmoCh04G006230	Cucurbita maxima (Rimu)	cmacmoB340
CmoCh04G006230	Cucurbita pepo (Zucchini)	cmocpeB670