Cp4.1LG01g01350 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGTTGCAAACAAGCGATTTAAGGCCACGAACGACATGCCGGTCGCCGCAAAACAAGGAAATATCCTTATCAATTTTGGTACAACATTGACGATTATGCCCCCAAATTTGTACAAACGTGTCACTTTGACATTGGCCCATGTTGGTAAAGCGAAGCGAGTGCATGATTCGATTAGGGTTTTGGATCTCTGCTTCGCTGCGTGCAGCGTTGATCATTTGAATATTCCGGTCATTACGACACATTTTGCTGGCGGCAACGACGTGAAATTGTTATCGTTGAATATATTTGCAATGGTGGCAAAATAA ATGTCCGTTGCAAACAAGCGATTTAAGGCCACGAACGACATGCCGGTCGCCGCAAAACAAGGAAATATCCTTATCAATTTTGGTACAACATTGACGATTATGCCCCCAAATTTGTACAAACGTGTCACTTTGACATTGGCCCATGTTGGTAAAGCGAAGCGAGTGCATGATTCGATTAGGGTTTTGGATCTCTGCTTCGCTGCGTGCAGCGTTGATCATTTGAATATTCCGGTCATTACGACACATTTTGCTGGCGGCAACGACGTGAAATTGTTATCGTTGAATATATTTGCAATGGTGGCAAAATAA ATGTCCGTTGCAAACAAGCGATTTAAGGCCACGAACGACATGCCGGTCGCCGCAAAACAAGGAAATATCCTTATCAATTTTGGTACAACATTGACGATTATGCCCCCAAATTTGTACAAACGTGTCACTTTGACATTGGCCCATGTTGGTAAAGCGAAGCGAGTGCATGATTCGATTAGGGTTTTGGATCTCTGCTTCGCTGCGTGCAGCGTTGATCATTTGAATATTCCGGTCATTACGACACATTTTGCTGGCGGCAACGACGTGAAATTGTTATCGTTGAATATATTTGCAATGGTGGCAAAATAA MSVANKRFKATNDMPVAAKQGNILINFGTTLTIMPPNLYKRVTLTLAHVGKAKRVHDSIRVLDLCFAACSVDHLNIPVITTHFAGGNDVKLLSLNIFAMVAK
BLAST of Cp4.1LG01g01350 vs. Swiss-Prot
Match: CDR1_ARATH (Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-07 Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. TrEMBL
Match: A0A0A0KZZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055410 PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 7.0e-22 Identity = 58/101 (57.43%), Postives = 71/101 (70.30%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. TrEMBL
Match: A0A0A0KV20_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055400 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 4.5e-13 Identity = 53/106 (50.00%), Postives = 64/106 (60.38%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. TrEMBL
Match: M5WRG3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025167mg PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.2e-12 Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. TrEMBL
Match: A0A0L9V285_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g006700 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 5.5e-11 Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. TrEMBL
Match: A0A151TPR6_CAJCA (Aspartic proteinase nepenthesin-1 OS=Cajanus cajan GN=KK1_022702 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 7.2e-11 Identity = 39/82 (47.56%), Postives = 55/82 (67.07%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. TAIR10
Match: AT1G64830.1 (AT1G64830.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 68.2 bits (165), Expect = 3.4e-12 Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. TAIR10
Match: AT5G33340.1 (AT5G33340.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 57.4 bits (137), Expect = 6.0e-09 Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. TAIR10
Match: AT2G28010.1 (AT2G28010.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 51.6 bits (122), Expect = 3.3e-07 Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. TAIR10
Match: AT2G35615.1 (AT2G35615.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 50.4 bits (119), Expect = 7.4e-07 Identity = 31/96 (32.29%), Postives = 53/96 (55.21%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. TAIR10
Match: AT2G28220.1 (AT2G28220.1 Eukaryotic aspartyl protease family protein) HSP 1 Score: 49.3 bits (116), Expect = 1.6e-06 Identity = 33/88 (37.50%), Postives = 46/88 (52.27%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. NCBI nr
Match: gi|449462551|ref|XP_004149004.1| (PREDICTED: probable aspartic protease At2g35615 [Cucumis sativus]) HSP 1 Score: 111.3 bits (277), Expect = 1.0e-21 Identity = 58/101 (57.43%), Postives = 71/101 (70.30%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. NCBI nr
Match: gi|659102472|ref|XP_008452150.1| (PREDICTED: probable aspartic protease At2g35615 [Cucumis melo]) HSP 1 Score: 110.2 bits (274), Expect = 2.2e-21 Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. NCBI nr
Match: gi|470131788|ref|XP_004301773.1| (PREDICTED: aspartic proteinase CDR1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 82.8 bits (203), Expect = 3.8e-13 Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. NCBI nr
Match: gi|778697533|ref|XP_004149005.2| (PREDICTED: probable aspartic protease At2g35615 [Cucumis sativus]) HSP 1 Score: 82.0 bits (201), Expect = 6.5e-13 Identity = 53/106 (50.00%), Postives = 64/106 (60.38%), Query Frame = 1
BLAST of Cp4.1LG01g01350 vs. NCBI nr
Match: gi|645265299|ref|XP_008238084.1| (PREDICTED: aspartic proteinase CDR1-like [Prunus mume]) HSP 1 Score: 79.7 bits (195), Expect = 3.2e-12 Identity = 46/104 (44.23%), Postives = 61/104 (58.65%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|