CmoCh04G006280 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G006280
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Eukaryotic aspartyl protease family protein
Location	Cmo_Chr04 : 3116065 .. 3116849 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAGCGGCAGTTTCAGCGGAGCTACCTCAGGAATTATCGAACTCGACAGCGACGCTCTCTCTTTGCTCTCTCAAATGAGCAAAATCTTTGCCGTTAAACGACAGTTCTCGTATTGCTTGCCGACCTTCTTCAGTGTCTAAAATGTAACAGGCAAAGTAAGCTTCGACAAAAAGGCCATTGTTTCAGGGCGAAAAGTCATTTCTACCTCTCTCATGTTAAAAGAACCCGATACCTTCATTACCTAACTCTTGAAGCAATGTCCGTTGCAAACAAGCGGTTTAAGGCCGCGAACGACATGTCGGTCGCCGCAGAACAAGGAAATATCCTTATGAATTTCGGTACAACATTGACAATTCTGCCCTCGAATTTGTACAAACGTGTCGCTTTGACATTGGCGCGTGTTGTTAAAGTGAAGCGAGTGCATGATTCGACTGGGGTTTTGGATCTCTGCTTCGTTGCGCGCAGCGTTGATCATTTGAATATCTCGGTCATTACGACACATTTTTCCGGCGACAACGACGTAAAATTGTTATCGTTGAATATATTTGCAATGGTGGCAAAATAATGTGGCTTGTTTGGCTTTGGCGCTTCCGCGAATTTTGCCATTTTTGAAAACTTGGCTCAGGTGAACTTTTTGGTCGGATACGATATCAAGCGTAAGAGATTGTCGTTTAAATACAACGTTTGTGCTTAAAGACAACAAGTCGTTTCTCTATTATTTGTGTTTTGATTACAGTTATTTCTCTTCACAAATCTTATGGTTAGACATAACAAAATTTGA

mRNA sequence

ATGAACAGCGGCAGTTTCAGCGGAGCTACCTCAGGAATTATCGAACTCGACAGCGACGCTCTCTCTTTGCTCTCTCAAATGAGCAAAATCTTTGCCGTTAAACGACAGTTCTCGCAAAGTAAGCTTCGACAAAAAGGCCATTGTTTCAGGGCGAAAAGTCATTTCTACCTCTCTCATGTTAAAAGAACCCGATACCTTCATTACCTAACTCTTGAAGCAATGTCCGTTGCAAACAAGCGGTTTAAGGCCGCGAACGACATGTCGGTCGCCGCAGAACAAGGAAATATCCTTATGAATTTCGGTACAACATTGACAATTCTGCCCTCGAATTTGTACAAACGTGTCGCTTTGACATTGGCGCGTGTTGTTAAAGTGAAGCGAGTGCATGATTCGACTGGGGTTTTGGATCTCTGCTTCGTTGCGCGCAGCGTTGATCATTTGAATATCTCGGTCATTACGACACATTTTTCCGGCGACAACGACGTAAAATTGTTATCGTTGAATATATTTGCAATGGTGAACTTTTTGGTCGGATACGATATCAAGCGTAAGAGATTGTCGTTTAAATACAACTTATTTCTCTTCACAAATCTTATGGTTAGACATAACAAAATTTGA

Coding sequence (CDS)

ATGAACAGCGGCAGTTTCAGCGGAGCTACCTCAGGAATTATCGAACTCGACAGCGACGCTCTCTCTTTGCTCTCTCAAATGAGCAAAATCTTTGCCGTTAAACGACAGTTCTCGCAAAGTAAGCTTCGACAAAAAGGCCATTGTTTCAGGGCGAAAAGTCATTTCTACCTCTCTCATGTTAAAAGAACCCGATACCTTCATTACCTAACTCTTGAAGCAATGTCCGTTGCAAACAAGCGGTTTAAGGCCGCGAACGACATGTCGGTCGCCGCAGAACAAGGAAATATCCTTATGAATTTCGGTACAACATTGACAATTCTGCCCTCGAATTTGTACAAACGTGTCGCTTTGACATTGGCGCGTGTTGTTAAAGTGAAGCGAGTGCATGATTCGACTGGGGTTTTGGATCTCTGCTTCGTTGCGCGCAGCGTTGATCATTTGAATATCTCGGTCATTACGACACATTTTTCCGGCGACAACGACGTAAAATTGTTATCGTTGAATATATTTGCAATGGTGAACTTTTTGGTCGGATACGATATCAAGCGTAAGAGATTGTCGTTTAAATACAACTTATTTCTCTTCACAAATCTTATGGTTAGACATAACAAAATTTGA

Homology

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BLAST of CmoCh04G006280 vs. Swiss-Prot
Match: CDR1_ARATH (Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.3e-11
Identity = 69/225 (30.67%), Postives = 103/225 (45.78%), Query Frame = 1


Query: 2   NSGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQFSQSKLRQKGHC-----FRAKSHFY 61
           N+G+F+   SGI+ L    +SL+ Q+      K  +    L  K        F   +   
Sbjct: 210 NAGTFNKKGSGIVGLGGGPVSLIKQLGDSIDGKFSYCLVPLTSKKDQTSKINFGTNAIVS 269

Query: 62  LSHVKRTRYL--------HYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTILP 121
            S V  T  +        +YLTL+++SV +K+ + +   S ++E GNI+++ GTTLT+LP
Sbjct: 270 GSGVVSTPLIAKASQETFYYLTLKSISVGSKQIQYSGSDSESSE-GNIIIDSGTTLTLLP 329

Query: 122 SNLYKRVALTLARVVKVKRVHDSTGVLDLCFVARSVDHLNISVITTHFSGDNDVKLLSLN 181
           +  Y  +   +A  +  ++  D    L LC+ A     L + VIT HF G  DVKL S N
Sbjct: 330 TEFYSELEDAVASSIDAEKKQDPQSGLSLCYSA--TGDLKVPVITMHFDG-ADVKLDSSN 389

Query: 182 IF------------------------AMVNFLVGYDIKRKRLSFK 190
            F                        A +NFLVGYD   K +SFK
Sbjct: 390 AFVQVSEDLVCFAFRGSPSFSIYGNVAQMNFLVGYDTVSKTVSFK 430

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BLAST of CmoCh04G006280 vs. TrEMBL
Match: A0A0A0KZZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055410 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.7e-31
Identity = 100/229 (43.67%), Postives = 126/229 (55.02%), Query Frame = 1


Query: 2   NSGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQFSQ------SKLRQKGHC-FRAKSH 61
           N G+F G TSGII L   +LSL+SQM  I  VK +FS       S     G   F  K+ 
Sbjct: 204 NGGTFGGVTSGIIGLGGGSLSLVSQMRTIAGVKPRFSYCLPTFFSNANITGTISFGRKAV 263

Query: 62  FYLSHVKRTRYL-------HYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTIL 121
                V  T  +       ++LTLEA+SV  KRFKAAN +S     GNI+++ GTTLT+L
Sbjct: 264 VSGRQVVSTPLVPRSPDTFYFLTLEAISVGKKRFKAANGISAMTNHGNIIIDSGTTLTLL 323

Query: 122 PSNLYKRVALTLARVVKVKRVHDSTGVLDLCFVARSVDHLNISVITTHFSGDNDVKLLSL 181
           P +LY  V  TLARV+K KRV D +G+L+LC+ A  VD LNI +IT HF+G  DVKLL +
Sbjct: 324 PRSLYYGVFSTLARVIKAKRVDDPSGILELCYSAGQVDDLNIPIITAHFAGGADVKLLPV 383

Query: 182 NIF------------------------AMVNFLVGYDIKRKRLSFKYNL 193
           N F                        A +NF VGYD+  KRLSF+  L
Sbjct: 384 NTFAPVADNVTCLTFAPATQVAIFGNLAQINFEVGYDLGNKRLSFEPKL 432

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BLAST of CmoCh04G006280 vs. TrEMBL
Match: A0A0A0KV20_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055400 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21
Identity = 89/230 (38.70%), Postives = 115/230 (50.00%), Query Frame = 1


Query: 2   NSGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQFSQSKLRQKGHCFRAKSHFYLSHV- 61
           +SG F G  SG+I L    LSL+SQMS+   + R+FS        H    K +F  + V 
Sbjct: 204 SSGGF-GFASGVIGLGGGQLSLVSQMSQTSGISRRFSYCLPTLLSHA-NGKINFGENAVV 263

Query: 62  ------------KRTRYLHYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTILP 121
                       K T   +Y+TLEA+S+ N+R  A       A+QGN++++ GTTLTILP
Sbjct: 264 SGPGVVSTPLISKNTVTYYYITLEAISIGNERHMAF------AKQGNVIIDSGTTLTILP 323

Query: 122 SNLYKRVALTLARVVKVKRVHDSTGVLDLCF--VARSVDHLNISVITTHFSGDNDVKLLS 181
             LY  V  +L +VVK KRV D  G LDLCF     +   L I VIT HFSG  +V LL 
Sbjct: 324 KELYDGVVSSLLKVVKAKRVKDPHGSLDLCFDDGINAAASLGIPVITAHFSGGANVNLLP 383

Query: 182 LNIF---------------------------AMVNFLVGYDIKRKRLSFK 190
           +N F                           A  NFL+GYD++ KRLSFK
Sbjct: 384 INTFRKVADNVNCLTLKAASPTTEFGIIGNLAQANFLIGYDLEAKRLSFK 425

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BLAST of CmoCh04G006280 vs. TrEMBL
Match: V7AJQ7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G208900g PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.4e-18
Identity = 76/221 (34.39%), Postives = 109/221 (49.32%), Query Frame = 1


Query: 2   NSGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQF-------SQSKLR-QKGHCFRAKS 61
           NS SF G  SG++ L    +S +SQ+      K  +       + SKL          K 
Sbjct: 200 NSVSFEGKGSGVVGLGRGPVSFISQLGSSIGGKFSYCFAPMANTSSKLNFGDAAVVSGKG 259

Query: 62  HFYLSHVK-RTRYLHYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTILPSNLY 121
                 V       +YLTLEA SV   R K  N  S +  +GNI+++ GTTLT+LP ++Y
Sbjct: 260 SVSTPIVSLEPMVFYYLTLEAFSVGKTRIKFRNFSSGSNGEGNIIIDSGTTLTLLPGDVY 319

Query: 122 KRVALTLARVVKVKRVHDSTGVLDLCFVARSVDHLNISVITTHFSGDNDVKLLSLNIF-- 181
           K++   +AR +++ RV D    L LC+  +  D ++  VIT HF GD DVKL ++N F  
Sbjct: 320 KKLESAVAREIELDRVEDPFKQLSLCYKGK-FDEVHAPVITAHFRGDADVKLNAVNTFVE 379

Query: 182 ----------------------AMVNFLVGYDIKRKRLSFK 190
                                 A +NFLVGYD+++KR+SFK
Sbjct: 380 VDEGVVCLAFMASEIGSIFGNLAQINFLVGYDLEKKRVSFK 419

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BLAST of CmoCh04G006280 vs. TrEMBL
Match: A0A151REE8_CAJCA (Aspartic proteinase nepenthesin-1 OS=Cajanus cajan GN=KK1_037805 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-17
Identity = 75/223 (33.63%), Postives = 114/223 (51.12%), Query Frame = 1


Query: 2   NSGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQFSQSKLRQKGHCFRAKSHFYLSHVK 61
           N+ SF G TSGI+ L    +SL+SQ+      K  +  + +  + +   +K HF  + V 
Sbjct: 177 NTVSFEGKTSGIVGLGLGPVSLVSQLKSSIRGKFSYCLTPMYSQSNS-SSKLHFGDAAVV 236

Query: 62  RTR-----------YLHYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTILPSN 121
             +             ++LTLEA SV NKR       S  + +GNI+++ GTTLT+LP +
Sbjct: 237 SGKGTISTPMVFQEVFYFLTLEAFSVGNKRIVLRGSSSRPSRKGNIIIDSGTTLTLLPKD 296

Query: 122 LYKRVALTLARVVKVKRVHDSTGVLDLCFVARSVDHLNISVITTHFSGDNDVKLLSLNIF 181
           +Y ++   +A  VK++R  D +  L LC+   S D L++ VIT HF+G  DVKL ++N F
Sbjct: 297 VYSKLESAVADAVKLERAKDPSHELSLCYKVTS-DELDVPVITAHFNG-ADVKLNAINTF 356

Query: 182 AMV------------------------NFLVGYDIKRKRLSFK 190
             V                        NFLVGYD+++K +SFK
Sbjct: 357 LQVADGVVCFAFMSSPIGPIFGNLAQQNFLVGYDLEKKMVSFK 396

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BLAST of CmoCh04G006280 vs. TrEMBL
Match: M5WRG3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025167mg PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.7e-17
Identity = 78/231 (33.77%), Postives = 113/231 (48.92%), Query Frame = 1


Query: 2   NSGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQFSQSKLRQKGHCFRAKSHFYLSHV- 61
           N G+F  + SG+I L    LSL+SQ++K+     +FS   L    +   +K  F  + + 
Sbjct: 223 NGGTFDESGSGLIGLGGGPLSLISQLTKL-TNGGKFSYCLL-PTANTAASKISFGSAGIV 282

Query: 62  ------------KRTRYLHYLTLEAMSVANKRFKA------ANDMSVAAEQGNILMNFGT 121
                       K     +YLTLEA+SV  KR             +VAA +GNI+++ GT
Sbjct: 283 SGSGAVSTPLVAKNPDTFYYLTLEAISVGEKRLAYKTKSPDCEKAAVAANEGNIIIDSGT 342

Query: 122 TLTILPSNLYKRVALTLARVVKVKRVHDSTGVLDLCFVARSVDHLNISVITTHFSGDNDV 181
           TLT+LP   +  +   L   +  +RV D  G+L LCF ++S D + + VIT HFSG  DV
Sbjct: 343 TLTLLPPGFHDDLVSALETAINAERVSDPRGILSLCFKSKS-DDIGVPVITVHFSGGADV 402

Query: 182 KLLSLNIF------------------------AMVNFLVGYDIKRKRLSFK 190
           KL +LN F                        A +NFLVGYD++ + +SFK
Sbjct: 403 KLQALNTFARMDDDMICFTMIPSSDVAIFGNLAQMNFLVGYDLEERSVSFK 450

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BLAST of CmoCh04G006280 vs. TAIR10
Match: AT1G64830.1 (AT1G64830.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 82.8 bits (203), Expect = 2.7e-16
Identity = 76/224 (33.93%), Postives = 106/224 (47.32%), Query Frame = 1


Query: 2   NSGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQF------SQSKLRQK-----GHCFR 61
           N+G+F  A SGII L   + SL+SQ+ K    K  +      S++ L  K          
Sbjct: 205 NTGTFDPAGSGIIGLGGGSTSLVSQLRKSINGKFSYCLVPFTSETGLTSKINFGTNGIVS 264

Query: 62  AKSHFYLSHVKRTRYLHY-LTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTILPS 121
                  S VK+    +Y L LEA+SV +K+ +  + +    E GNI+++ GTTLT+LPS
Sbjct: 265 GDGVVSTSMVKKDPATYYFLNLEAISVGSKKIQFTSTIFGTGE-GNIVIDSGTTLTLLPS 324

Query: 122 NLYKRVALTLARVVKVKRVHDSTGVLDLCFVARSVDHLNISVITTHFSGDNDVKLLSLNI 181
           N Y  +   +A  +K +RV D  G+L LC+  R      +  IT HF G  DVKL +LN 
Sbjct: 325 NFYYELESVVASTIKAERVQDPDGILSLCY--RDSSSFKVPDITVHFKG-GDVKLGNLNT 384

Query: 182 F------------------------AMVNFLVGYDIKRKRLSFK 190
           F                        A +NFLVGYD     +SFK
Sbjct: 385 FVAVSEDVSCFAFAANEQLTIFGNLAQMNFLVGYDTVSGTVSFK 424

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BLAST of CmoCh04G006280 vs. TAIR10
Match: AT5G33340.1 (AT5G33340.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-12
Identity = 69/225 (30.67%), Postives = 103/225 (45.78%), Query Frame = 1


Query: 2   NSGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQFSQSKLRQKGHC-----FRAKSHFY 61
           N+G+F+   SGI+ L    +SL+ Q+      K  +    L  K        F   +   
Sbjct: 210 NAGTFNKKGSGIVGLGGGPVSLIKQLGDSIDGKFSYCLVPLTSKKDQTSKINFGTNAIVS 269

Query: 62  LSHVKRTRYL--------HYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTILP 121
            S V  T  +        +YLTL+++SV +K+ + +   S ++E GNI+++ GTTLT+LP
Sbjct: 270 GSGVVSTPLIAKASQETFYYLTLKSISVGSKQIQYSGSDSESSE-GNIIIDSGTTLTLLP 329

Query: 122 SNLYKRVALTLARVVKVKRVHDSTGVLDLCFVARSVDHLNISVITTHFSGDNDVKLLSLN 181
           +  Y  +   +A  +  ++  D    L LC+ A     L + VIT HF G  DVKL S N
Sbjct: 330 TEFYSELEDAVASSIDAEKKQDPQSGLSLCYSA--TGDLKVPVITMHFDG-ADVKLDSSN 389

Query: 182 IF------------------------AMVNFLVGYDIKRKRLSFK 190
            F                        A +NFLVGYD   K +SFK
Sbjct: 390 AFVQVSEDLVCFAFRGSPSFSIYGNVAQMNFLVGYDTVSKTVSFK 430

[Close]

BLAST of CmoCh04G006280 vs. TAIR10
Match: AT2G28010.1 (AT2G28010.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08
Identity = 49/149 (32.89%), Postives = 66/149 (44.30%), Query Frame = 1


Query: 67  HYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTILPSNLYKRVALTLARVVKVK 126
           +YL L+A+SV N R +       A E GNI+++ GTTLT  P +    V   +  VV   
Sbjct: 241 YYLNLDAVSVGNTRIETMGTTFHALE-GNIVIDSGTTLTYFPVSYCNLVRQAVEHVVTAV 300

Query: 127 RVHDSTGVLDLCFVARSVDHLNISVITTHFSGDNDVKLLSLNIF---------------- 186
           R  D TG   LC+ + ++D     VIT HFSG  D+ L   N++                
Sbjct: 301 RAADPTGNDMLCYNSDTID--IFPVITMHFSGGVDLVLDKYNMYMESNNGGVFCLAIICN 360

Query: 187 -----------AMVNFLVGYDIKRKRLSF 189
                      A  NFLVGYD     +SF
Sbjct: 361 SPTQEAIFGNRAQNNFLVGYDSSSLLVSF 386

[Close]

BLAST of CmoCh04G006280 vs. TAIR10
Match: AT2G28220.1 (AT2G28220.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.7e-08
Identity = 63/213 (29.58%), Postives = 97/213 (45.54%), Query Frame = 1


Query: 2   NSGSFSGATSGIIELDSDALSLLSQMSKIFA--VKRQFS---QSKLRQKGHCFRAKSHFY 61
           NSG F+ ++SGI+ L+    SL+SQM   +   +   FS    SK+    +   A     
Sbjct: 191 NSG-FASSSSGIVGLNMGPRSLISQMDLPYPGLISYCFSGQGTSKINFGTNAIVAGDGTV 250

Query: 62  LSH--VKRTRYLHYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTILPSNLYKR 121
            +   +K+    +YL L+A+SV + R +        AE GNI+++ G+T+T  P +    
Sbjct: 251 AADMFIKKDNPFYYLNLDAVSVEDNRIETLGT-PFHAEDGNIVIDSGSTVTYFPVSYCNL 310

Query: 122 VALTLARVVKVKRVHDSTGVLDLCFVARSVDHLNISVITTHFSGDNDVKLLSLNIF---- 181
           V   + +VV   RV D +G   LC+ + ++D     VIT HFSG  D+ L   N++    
Sbjct: 311 VRKAVEQVVTAVRVPDPSGNDMLCYFSETID--IFPVITMHFSGGADLVLDKYNMYMESN 370

[Close]

BLAST of CmoCh04G006280 vs. TAIR10
Match: AT1G31450.1 (AT1G31450.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 55.5 bits (132), Expect = 4.6e-08
Identity = 46/153 (30.07%), Postives = 71/153 (46.41%), Query Frame = 1


Query: 67  HYLTLEAMSVANKRFKAAN-----DMSVAAEQGNILMNFGTTLTILPSNLYKRVALTLAR 126
           ++LTLEA++V   +          +   +   GNI+++ GTTLT+L S  Y      +  
Sbjct: 287 YFLTLEAVTVGKTKLPYTGGGYGLNGKSSKRTGNIIIDSGTTLTLLDSGFYDDFGTAVEE 346

Query: 127 -VVKVKRVHDSTGVLDLCFVARSVDHLNISVITTHFSGDNDVKLLSLNIFAMVN------ 186
            V   KRV D  G+L  CF +   + + +  IT HF+ + DVKL  +N F  +N      
Sbjct: 347 SVTGAKRVSDPQGLLTHCFKSGDKE-IGLPAITMHFT-NADVKLSPINAFVKLNEDTVCL 406

Query: 187 ------------------FLVGYDIKRKRLSFK 190
                             FLVGYD++ K +SF+
Sbjct: 407 SMIPTTEVAIYGNMVQMDFLVGYDLETKTVSFQ 437

[Close]

BLAST of CmoCh04G006280 vs. NCBI nr
Match: gi|659102472|ref|XP_008452150.1| (PREDICTED: probable aspartic protease At2g35615 [Cucumis melo])

HSP 1 Score: 151.8 bits (382), Expect = 1.3e-33
Identity = 102/226 (45.13%), Postives = 125/226 (55.31%), Query Frame = 1


Query: 2   NSGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQFSQS-KLRQKGHCFRAKSHFYLSHV 61
           N G+F G TSGII L   +LSL+SQMS I  VK QFS              K  F    V
Sbjct: 204 NGGTFGGVTSGIIGLGGGSLSLVSQMSTIAGVKPQFSYCLPTFFSNENITGKISFGRKAV 263

Query: 62  KRTRYL-------------HYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTIL 121
              R +             ++LTLEA+SV NKRFKAA DMS    QGNI+++ GTTLT+L
Sbjct: 264 VSGRQVVSTPLVPRSPDTFYFLTLEAISVGNKRFKAAKDMSAMTNQGNIIIDSGTTLTLL 323

Query: 122 PSNLYKRVALTLARVVKVKRVHDSTGVLDLCFVARSVDHLNISVITTHFSGDNDVKLLSL 181
           P +LY  V  TLARV+K KRV D +G+L+LC+ A  ++ LNI +IT HFSG  DVKLL +
Sbjct: 324 PRSLYDGVVSTLARVIKTKRVDDPSGILELCYSAGQLEDLNIPIITAHFSGRADVKLLPV 383

Query: 182 NIF------------------------AMVNFLVGYDIKRKRLSFK 190
           N F                        A +NF VGYD+  KRLSFK
Sbjct: 384 NTFAPVADNVICLTLAPATNVAIFGNLAQINFEVGYDLGNKRLSFK 429

[Close]

BLAST of CmoCh04G006280 vs. NCBI nr
Match: gi|449462551|ref|XP_004149004.1| (PREDICTED: probable aspartic protease At2g35615 [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 1.4e-30
Identity = 100/229 (43.67%), Postives = 126/229 (55.02%), Query Frame = 1


Query: 2   NSGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQFSQ------SKLRQKGHC-FRAKSH 61
           N G+F G TSGII L   +LSL+SQM  I  VK +FS       S     G   F  K+ 
Sbjct: 204 NGGTFGGVTSGIIGLGGGSLSLVSQMRTIAGVKPRFSYCLPTFFSNANITGTISFGRKAV 263

Query: 62  FYLSHVKRTRYL-------HYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTIL 121
                V  T  +       ++LTLEA+SV  KRFKAAN +S     GNI+++ GTTLT+L
Sbjct: 264 VSGRQVVSTPLVPRSPDTFYFLTLEAISVGKKRFKAANGISAMTNHGNIIIDSGTTLTLL 323

Query: 122 PSNLYKRVALTLARVVKVKRVHDSTGVLDLCFVARSVDHLNISVITTHFSGDNDVKLLSL 181
           P +LY  V  TLARV+K KRV D +G+L+LC+ A  VD LNI +IT HF+G  DVKLL +
Sbjct: 324 PRSLYYGVFSTLARVIKAKRVDDPSGILELCYSAGQVDDLNIPIITAHFAGGADVKLLPV 383

Query: 182 NIF------------------------AMVNFLVGYDIKRKRLSFKYNL 193
           N F                        A +NF VGYD+  KRLSF+  L
Sbjct: 384 NTFAPVADNVTCLTFAPATQVAIFGNLAQINFEVGYDLGNKRLSFEPKL 432

[Close]

BLAST of CmoCh04G006280 vs. NCBI nr
Match: gi|778697533|ref|XP_004149005.2| (PREDICTED: probable aspartic protease At2g35615 [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 1.5e-21
Identity = 89/230 (38.70%), Postives = 115/230 (50.00%), Query Frame = 1


Query: 2   NSGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQFSQSKLRQKGHCFRAKSHFYLSHV- 61
           +SG F G  SG+I L    LSL+SQMS+   + R+FS        H    K +F  + V 
Sbjct: 204 SSGGF-GFASGVIGLGGGQLSLVSQMSQTSGISRRFSYCLPTLLSHA-NGKINFGENAVV 263

Query: 62  ------------KRTRYLHYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTILP 121
                       K T   +Y+TLEA+S+ N+R  A       A+QGN++++ GTTLTILP
Sbjct: 264 SGPGVVSTPLISKNTVTYYYITLEAISIGNERHMAF------AKQGNVIIDSGTTLTILP 323

Query: 122 SNLYKRVALTLARVVKVKRVHDSTGVLDLCF--VARSVDHLNISVITTHFSGDNDVKLLS 181
             LY  V  +L +VVK KRV D  G LDLCF     +   L I VIT HFSG  +V LL 
Sbjct: 324 KELYDGVVSSLLKVVKAKRVKDPHGSLDLCFDDGINAAASLGIPVITAHFSGGANVNLLP 383

Query: 182 LNIF---------------------------AMVNFLVGYDIKRKRLSFK 190
           +N F                           A  NFL+GYD++ KRLSFK
Sbjct: 384 INTFRKVADNVNCLTLKAASPTTEFGIIGNLAQANFLIGYDLEAKRLSFK 425

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BLAST of CmoCh04G006280 vs. NCBI nr
Match: gi|659102474|ref|XP_008452152.1| (PREDICTED: probable aspartic protease At2g35615 [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19
Identity = 86/232 (37.07%), Postives = 113/232 (48.71%), Query Frame = 1


Query: 3   SGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQFSQSKLRQKGHCFRAKSHFYLSHV-- 62
           SG   G  SG+I L    LSL+SQMS+   + R+FS       GH    K +F  + V  
Sbjct: 204 SGGGFGFASGVIGLGGGQLSLVSQMSQTSGISRRFSYCLPPLLGHA-NGKINFAQNAVVS 263

Query: 63  -----------KRTRYLHYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTILPS 122
                      K     +Y+TLEA+S+ N+R  A+      A+QGN++++ GTTLT+LP 
Sbjct: 264 GPGVVSTPLISKDPVTYYYITLEAISIGNERHMAS------AKQGNVIIDSGTTLTVLPK 323

Query: 123 NLYKRVALTLARVVKVKRVHDSTGVLDLCF-----VARSVDHLNISVITTHFSGDNDVKL 182
            LY  V  +L +VVK KRV D     DLCF     VA S     I +IT HFSG  +V L
Sbjct: 324 ELYDGVVSSLLKVVKAKRVKDPGSFWDLCFDDGINVAAS---SGIPIITAHFSGGANVNL 383

Query: 183 LSLNIF---------------------------AMVNFLVGYDIKRKRLSFK 190
           L +N F                           A  NFL+GYD++ KRLSFK
Sbjct: 384 LPVNTFQKVANNVNCLTLTAASPTDEFGIIGNLAQANFLIGYDLEAKRLSFK 425

[Close]

BLAST of CmoCh04G006280 vs. NCBI nr
Match: gi|659102476|ref|XP_008452153.1| (PREDICTED: probable aspartic protease At2g35615 [Cucumis melo])

HSP 1 Score: 102.4 bits (254), Expect = 9.3e-19
Identity = 85/232 (36.64%), Postives = 112/232 (48.28%), Query Frame = 1


Query: 3   SGSFSGATSGIIELDSDALSLLSQMSKIFAVKRQFSQSKLRQKGHCFRAKSHFYLSHV-- 62
           SG   G  SG+I L    LSL+SQMS+   + R+FS        H    K +F  + V  
Sbjct: 202 SGGGFGFASGVIGLGGGQLSLVSQMSQTSGISRRFSYCLPTLLSHA-NGKINFGQNAVVS 261

Query: 63  -----------KRTRYLHYLTLEAMSVANKRFKAANDMSVAAEQGNILMNFGTTLTILPS 122
                      K     +Y+TLEA+S+ N+R  A+      A+QGN++++ GTTLT+LP 
Sbjct: 262 GPGVVSTPLISKDPVTYYYITLEAISIGNERHMAS------AKQGNVIIDSGTTLTVLPK 321

Query: 123 NLYKRVALTLARVVKVKRVHDSTGVLDLCF-----VARSVDHLNISVITTHFSGDNDVKL 182
            LY  V  +L +VVK KRV D     DLCF     VA S     I +IT HFSG  +V L
Sbjct: 322 ELYDGVVSSLLKVVKAKRVKDPGSFWDLCFDDGINVAAS---SGIPIITAHFSGGANVNL 381

Query: 183 LSLNIF---------------------------AMVNFLVGYDIKRKRLSFK 190
           L +N F                           A  NFL+GYD++ KRLSFK
Sbjct: 382 LPVNTFQKVANNVNCLTLTAASPTDEFGIIGNLAQANFLIGYDLEAKRLSFK 423

The following BLAST results are available for this feature:

BLAST of CmoCh04G006280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CDR1_ARATH	9.3e-11	30.67	Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1	[more]

BLAST of CmoCh04G006280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZZ3_CUCSA	9.7e-31	43.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055410 PE=3 SV=1	[more]
A0A0A0KV20_CUCSA	1.1e-21	38.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G055400 PE=3 SV=1	[more]
V7AJQ7_PHAVU	9.4e-18	34.39	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G208900g PE=3 SV=1	[more]
A0A151REE8_CAJCA	1.6e-17	33.63	Aspartic proteinase nepenthesin-1 OS=Cajanus cajan GN=KK1_037805 PE=3 SV=1	[more]
M5WRG3_PRUPE	2.7e-17	33.77	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025167mg PE=3 SV=1	[more]

BLAST of CmoCh04G006280 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G64830.1	2.7e-16	33.93	Eukaryotic aspartyl protease family protein	[more]
AT5G33340.1	5.3e-12	30.67	Eukaryotic aspartyl protease family protein	[more]
AT2G28010.1	2.1e-08	32.89	Eukaryotic aspartyl protease family protein	[more]
AT2G28220.1	2.7e-08	29.58	Eukaryotic aspartyl protease family protein	[more]
AT1G31450.1	4.6e-08	30.07	Eukaryotic aspartyl protease family protein	[more]

BLAST of CmoCh04G006280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102472\|ref\|XP_008452150.1\|	1.3e-33	45.13	PREDICTED: probable aspartic protease At2g35615 [Cucumis melo]	[more]
gi\|449462551\|ref\|XP_004149004.1\|	1.4e-30	43.67	PREDICTED: probable aspartic protease At2g35615 [Cucumis sativus]	[more]
gi\|778697533\|ref\|XP_004149005.2\|	1.5e-21	38.70	PREDICTED: probable aspartic protease At2g35615 [Cucumis sativus]	[more]
gi\|659102474\|ref\|XP_008452152.1\|	1.9e-19	37.07	PREDICTED: probable aspartic protease At2g35615 [Cucumis melo]	[more]
gi\|659102476\|ref\|XP_008452153.1\|	9.3e-19	36.64	PREDICTED: probable aspartic protease At2g35615 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001461	Aspartic_peptidase_A1
IPR021109	Peptidase_aspartic_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0004190	aspartic-type endopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004190	aspartic-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G006280.1	CmoCh04G006280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001461	Aspartic peptidase A1 family	PANTHER	PTHR13683	ASPARTYL PROTEASES	coord: 68..173 score: 5.3
IPR021109	Aspartic peptidase domain	GENE3D	G3DSA:2.40.70.10		coord: 57..173 score: 4.
IPR021109	Aspartic peptidase domain	unknown	SSF50630	Acid proteases	coord: 6..190 score: 1.99
None	No IPR available	PANTHER	PTHR13683:SF298	ASPARTIC PROTEINASE CDR1-RELATED	coord: 68..173 score: 5.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G006280	Cp4.1LG01g01350	Cucurbita pepo (Zucchini)	cmocpeB673

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G006280	Cucurbita pepo (Zucchini)	cmocpeB670
CmoCh04G006280	Bottle gourd (USVL1VR-Ls)	cmolsiB689
CmoCh04G006280	Cucumber (Gy14) v2	cgybcmoB515
CmoCh04G006280	Melon (DHL92) v3.6.1	cmomedB791
CmoCh04G006280	Silver-seed gourd	carcmoB0058
CmoCh04G006280	Silver-seed gourd	carcmoB0902
CmoCh04G006280	Cucumber (Chinese Long) v3	cmocucB0827
CmoCh04G006280	Watermelon (97103) v2	cmowmbB756
CmoCh04G006280	Wax gourd	cmowgoB0844
CmoCh04G006280	Cucurbita moschata (Rifu)	cmocmoB288
CmoCh04G006280	Cucumber (Gy14) v1	cgycmoB0276
CmoCh04G006280	Cucurbita maxima (Rimu)	cmacmoB340
CmoCh04G006280	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G006280	Wild cucumber (PI 183967)	cmocpiB707
CmoCh04G006280	Cucumber (Chinese Long) v2	cmocuB699
CmoCh04G006280	Melon (DHL92) v3.5.1	cmomeB697
CmoCh04G006280	Watermelon (Charleston Gray)	cmowcgB677
CmoCh04G006280	Watermelon (97103) v1	cmowmB676