Cp4.1LG01g00860 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTGGCCTGAAAGGGGATGAATTGGGGGGTCCTAGATATCGGGCAATGTGCCAGCGAGAAGGTTTAGCTCCGAATGGGATGGAGAACGAAATATTCTCTATAAAGCGTAGAAACTTCTCCTAGCAGATGGGTTCTAAAAATTTTGAGGGAGAGTTCGAACGGGAAAGTCGGACAATATCTACTCAGGGTGGAAACGGCTTTTTGGCTTGTTCTATCCTATTGTAATTAGTTGATTGAGGGAAACCTTGTGATTCTTCGTTTTTTTTTGTAGATCAGAACCAGAGCAAGATGCAACAAACGAGCTCCGAATCTTACCGGAGCTGGAACAGATAAGGAGACTAATGGCGATGAATCTAATGACTTGCCAATGTTTAATCAAACGACGCCGTGTGAACCTCTAGTGGCTATATCTGTAGCTGCGTGCCGTCTTCCCACCGGGCCGTAGTTCAGTGCGAGTCTTCAACTGGTTTCTTCTCAACAGGTACGTTTTCTTTCTGCGTTTTGATGTCTTCCCTCTTCGTTTAATCTGCAAAGCTTTAACATTCTCTCGCATGGCTTCGCGTCATCCCCGCATGCCCACCAGCTGTTTGTAGAAATGCCCAAGAGAGTATCTAATTTGTCGAGCTATAAAGTTAGTATACTATTTGGTTTTCTGTTTCCTACTTTTCTTCATGGCTTTCTGCTCCACCCTGCAGTGCATATCGTTCTTTGATGATGTCAAGCAGCAATATGGGGCTGCGTTTTTTGTCATACCCACAAAGGAATCTGCTTATGAAGCTCTCATCTATGCCCCCAGTGGCTGCAATTGCCAGCTTCGGGACTATCAAAAGGGCTATGGCTTGCAGGCGTGTTCGTTGTCATTTGAACTTGGATGATTCCAGCAGCAAGAAGAGGCAGCTGGAAAGGGTTTGTTCCGCCAATTCAAATGGGAAATTTAGCAATAAAGAGTTCATTAGTGTTGACTCACGGCTTTATGAGTATATCCTCTCCAATGTTCGAGAGCCTGAGGTACAATGTTGTTGCTCATCTATATGTTAAGTACTTTATGATCTGTCTGATTGTGATTGAATTCGTTGATTTAGATCTTGGGGCAACTTCGTGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCGCCTGATCAAGCACAACTTCTTGCAATGATTGTTCAAATTCTCGGTGCAAAGCGGTGCATCGAAGTGGGTGTTTACACTGTAAGCCCCTTCCTCCCATTCTTACTGCTTAATAACAAGGTTTTGTTTTGAAGAGTGCTATAACTTTAGGGCTAACCATAGTTTTCTATTCTCATTTAGGGATATTCATCTCTGGCCGTAGCGTTAGTCCTTCCAGAATCAGGGCGCTTAGTTGCCTGTGAAAGGGATGCCATATATCTAGATGTTGCTAGAAAATATTATGAACTTGCCGGTGTTTCTCACAAGGTAAGTACTTCTGGTTCTTCTTTCATCAAATGATTATGAACAGTGACATGAATCTTTTGAGAAATACTATCTTCCTATTTTTCTGCTGATAATCTGCAACTTTCATATTGTAATAGCTCCTACATGATTGCAACCAATGTATTCTGTTTGAGCTGTAAACTGTTTGTAGCAAATTTTTTGTTAGTTCTTGCTAGTATATTTCCTTTTACCCACATGATTGCAACCACGTTGATTGGAGAGGGAAACAAACGAAGCATTATTTATAAGGGTGGGGAAACCTCTCCCTAGCATATGCGTTTTAAAAACCTTGAGGGGAAAGCCCAAAGAGGACAATATCTGGTAACGGTGGGCTTGGGCTGTTACAAATGATATTAGAGCTAGACACCGGGCGGTGCGCCAGCGAGGACACTAAGCCCTGAAAGGGGGTGGACACCGGGCGGTGTGCTAGCGATGACGCTGAGCCCTGAAGGGGGGTGGATTGTGAGATCCCATATCAATTGAAAAGTGGAATAAAACATTCTTATAAGGGTGTGGAAACCTCTCCCTATCTGATGCATTTTAAAAACCTTGAGGGGAAACGTGAAAGGGAATGTCCAAGGAGGACAATATCGACTAGCGGTGGGCTTGGGATGATACTCTAACTAATTAACCGGGAGATTTGAGAAAGGCCATTCATTTAATCAGATTCCTCAAATTTTAGACCAGCCATACAGTATACCCTCTTATGGGTATACAAAGATCGATCAATTTCGTGTATTTATGTTCATAATTTTAAGCTATAACATGTTTCTGATGATCAAAACATGGTTTTGGACAATTTCTGGAAGTAGGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTGGCAGGTGAAGTGTTTTATGTTATATCATGTTTTGATTCAAAAACTTGTTTCGTTAGTTGATGGAATGATCTTATAATGCTTCTATTAGATTTTGTTATAACTATCCCATTATGTTCTCTCTTTTACCTTCTTGGCGATTTAACATGATATCAAAGTTAAAAGGGTGAGCTTTAAAACTTCTGTGATTTTACTTCCTCCGATGGCCTTTTTACAAAGATTGAATAGATAACATATTTCTGTGCACGTATAGTTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAACGAGGAGTACTTCGAACTGCTACTGCAACTGGTAAGACGAAAAACAATTAGCTTCTGCTAAAAAATCTGTTTATGTGTAATGGTTTTGTCAGATAGCCTATCTTTTCAGTCCATGATGTTGAAGTAAGTTCTTCATCGCCTTCATTCAGGTGAGAGTTGGAGGTATAATTGTGATTGACAATGTCCTTTGGTATGGAAGAGTAGCTGACCCAACGGTGCGTTAGCTTCGACATCTCGTGACATTGTGCCTCCATTTTAGTGTAGTTAACTGATGATCATGGTCTTTGAGCAGGTAAATGACAAGCAGACTGATAGCATTAGGAGATTGAATAAAAAGATAATGGAAGACGATCGAGTCGGGATTAGTATAGTGAGCATTTGATCTATGTTCCCTCTGCTAGCCTCCTTGAACTATGATGATGGTACTAAACTTGGTTTATTTAGGTACCCATTGGCGATGGCATGACAATTTGCCAGAAGAGATGAATGGTGCCTGCTGAACTTGAGGGCGTAGCATTAGCAAAACAGTGCATAAATGAATTTGAGTTTACTTTTGTGGATAAATATTTTATTTTTCTTTTGTGAATGTATTTCTATAGGATGTTGGAATATAATGCCATGTGGTATGATCATATCTACTTAGGAAAATCCAAAAAAAAAAAAAAAAGAAAAAAAAAAAGAAAACACTTCAATCATTGATGCATAATCATCAAGCTATATAATACAATATGGTTAGTAGTAATTTTAATTTTATTTGATAACGTGAATTTAACTCAATATTAAATCTCT CACTGGCCTGAAAGGGGATGAATTGGGGGGTCCTAGATATCGGGCAATGTGCCAGCGAGAAGGTTTAGCTCCGAATGGGATGGAGAACGAAATATTCTCTATAAAGCGTAGAAACTTCTCCTAGCAGATGGGTTCTAAAAATTTTGAGGGAGAGTTCGAACGGGAAAGTCGGACAATATCTACTCAGGGTGGAAACGGCTTTTTGGCTTGTTCTATCCTATTGTAATTAGTTGATTGAGGGAAACCTTGTGATTCTTCGTTTTTTTTTGTAGATCAGAACCAGAGCAAGATGCAACAAACGAGCTCCGAATCTTACCGGAGCTGGAACAGATAAGGAGACTAATGGCGATGAATCTAATGACTTGCCAATGTTTAATCAAACGACGCCGTGTGAACCTCTAGTGGCTATATCTGTAGCTGCGTGCCGTCTTCCCACCGGGCCGTAGTTCAGTGCGAGTCTTCAACTGGTTTCTTCTCAACAGTGCATATCGTTCTTTGATGATGTCAAGCAGCAATATGGGGCTGCGTTTTTTGTCATACCCACAAAGGAATCTGCTTATGAAGCTCTCATCTATGCCCCCAGTGGCTGCAATTGCCAGCTTCGGGACTATCAAAAGGGCTATGGCTTGCAGGCGTGTTCGTTGTCATTTGAACTTGGATGATTCCAGCAGCAAGAAGAGGCAGCTGGAAAGGGTTTGTTCCGCCAATTCAAATGGGAAATTTAGCAATAAAGAGTTCATTAGTGTTGACTCACGGCTTTATGAGTATATCCTCTCCAATGTTCGAGAGCCTGAGATCTTGGGGCAACTTCGTGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCGCCTGATCAAGCACAACTTCTTGCAATGATTGTTCAAATTCTCGGTGCAAAGCGGTGCATCGAAGTGGGTGTTTACACTGGATATTCATCTCTGGCCGTAGCGTTAGTCCTTCCAGAATCAGGGCGCTTAGTTGCCTGTGAAAGGGATGCCATATATCTAGATGTTGCTAGAAAATATTATGAACTTGCCGGTGTTTCTCACAAGGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTGGCAGTTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAACGAGGAGTACTTCGAACTGCTACTGCAACTGGTGAGAGTTGGAGGTATAATTGTGATTGACAATGTCCTTTGGTATGGAAGAGTAGCTGACCCAACGGTAAATGACAAGCAGACTGATAGCATTAGGAGATTGAATAAAAAGATAATGGAAGACGATCGAGTCGGGATTAGTATAGTACCCATTGGCGATGGCATGACAATTTGCCAGAAGAGATGAATGGTGCCTGCTGAACTTGAGGGCGTAGCATTAGCAAAACAGTGCATAAATGAATTTGAGTTTACTTTTGTGGATAAATATTTTATTTTTCTTTTGTGAATGTATTTCTATAGGATGTTGGAATATAATGCCATGTGGTATGATCATATCTACTTAGGAAAATCCAAAAAAAAAAAAAAAAGAAAAAAAAAAAGAAAACACTTCAATCATTGATGCATAATCATCAAGCTATATAATACAATATGGTTAGTAGTAATTTTAATTTTATTTGATAACGTGAATTTAACTCAATATTAAATCTCT ATGATGTCAAGCAGCAATATGGGGCTGCGTTTTTTGTCATACCCACAAAGGAATCTGCTTATGAAGCTCTCATCTATGCCCCCAGTGGCTGCAATTGCCAGCTTCGGGACTATCAAAAGGGCTATGGCTTGCAGGCGTGTTCGTTGTCATTTGAACTTGGATGATTCCAGCAGCAAGAAGAGGCAGCTGGAAAGGGTTTGTTCCGCCAATTCAAATGGGAAATTTAGCAATAAAGAGTTCATTAGTGTTGACTCACGGCTTTATGAGTATATCCTCTCCAATGTTCGAGAGCCTGAGATCTTGGGGCAACTTCGTGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCGCCTGATCAAGCACAACTTCTTGCAATGATTGTTCAAATTCTCGGTGCAAAGCGGTGCATCGAAGTGGGTGTTTACACTGGATATTCATCTCTGGCCGTAGCGTTAGTCCTTCCAGAATCAGGGCGCTTAGTTGCCTGTGAAAGGGATGCCATATATCTAGATGTTGCTAGAAAATATTATGAACTTGCCGGTGTTTCTCACAAGGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTGGCAGTTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAACGAGGAGTACTTCGAACTGCTACTGCAACTGGTGAGAGTTGGAGGTATAATTGTGATTGACAATGTCCTTTGGTATGGAAGAGTAGCTGACCCAACGGTAAATGACAAGCAGACTGATAGCATTAGGAGATTGAATAAAAAGATAATGGAAGACGATCGAGTCGGGATTAGTATAGTACCCATTGGCGATGGCATGACAATTTGCCAGAAGAGATGA MMSSSNMGLRFLSYPQRNLLMKLSSMPPVAAIASFGTIKRAMACRRVRCHLNLDDSSSKKRQLERVCSANSNGKFSNKEFISVDSRLYEYILSNVREPEILGQLREETASLRGSKMQVSPDQAQLLAMIVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACERDAIYLDVARKYYELAGVSHKVDVRHGLAADTLKSLIANGEAGSYDFAFIDAEKRMNEEYFELLLQLVRVGGIIVIDNVLWYGRVADPTVNDKQTDSIRRLNKKIMEDDRVGISIVPIGDGMTICQKR
BLAST of Cp4.1LG01g00860 vs. Swiss-Prot
Match: OMT15_ORYSJ (Tricin synthase 1 OS=Oryza sativa subsp. japonica GN=ROMT-15 PE=1 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 7.8e-43 Identity = 104/239 (43.51%), Postives = 147/239 (61.51%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. Swiss-Prot
Match: CMTD1_HUMAN (Catechol O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 2.5e-41 Identity = 90/211 (42.65%), Postives = 135/211 (63.98%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. Swiss-Prot
Match: CAMT2_MAIZE (Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=CCOAOMT2 PE=2 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 8.1e-40 Identity = 104/254 (40.94%), Postives = 144/254 (56.69%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase MdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 8.1e-40 Identity = 79/201 (39.30%), Postives = 131/201 (65.17%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. Swiss-Prot
Match: CAMT1_MAIZE (Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays GN=CCOAOMT1 PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.1e-39 Identity = 103/249 (41.37%), Postives = 143/249 (57.43%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. TrEMBL
Match: A0A0A0L0A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G064680 PE=4 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 5.0e-129 Identity = 246/294 (83.67%), Postives = 263/294 (89.46%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. TrEMBL
Match: A0A0B2QYP1_GLYSO (Tricin synthase 1 OS=Glycine soja GN=glysoja_011368 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 1.0e-94 Identity = 179/256 (69.92%), Postives = 215/256 (83.98%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. TrEMBL
Match: K7L7B7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G175700 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 1.0e-94 Identity = 179/256 (69.92%), Postives = 215/256 (83.98%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. TrEMBL
Match: V7BXC3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G051900g PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 1.4e-94 Identity = 179/240 (74.58%), Postives = 211/240 (87.92%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. TrEMBL
Match: A0A061DSY3_THECC (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_004992 PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 2.3e-94 Identity = 179/244 (73.36%), Postives = 208/244 (85.25%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. TAIR10
Match: AT3G61990.1 (AT3G61990.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 317.4 bits (812), Expect = 9.3e-87 Identity = 161/221 (72.85%), Postives = 192/221 (86.88%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. TAIR10
Match: AT3G62000.2 (AT3G62000.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 312.8 bits (800), Expect = 2.3e-85 Identity = 154/209 (73.68%), Postives = 187/209 (89.47%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. TAIR10
Match: AT4G26220.1 (AT4G26220.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 159.8 bits (403), Expect = 2.5e-39 Identity = 91/219 (41.55%), Postives = 129/219 (58.90%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. TAIR10
Match: AT4G34050.1 (AT4G34050.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 159.5 bits (402), Expect = 3.3e-39 Identity = 92/224 (41.07%), Postives = 133/224 (59.38%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. TAIR10
Match: AT1G67990.1 (AT1G67990.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 149.4 bits (376), Expect = 3.4e-36 Identity = 89/232 (38.36%), Postives = 135/232 (58.19%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. NCBI nr
Match: gi|659101801|ref|XP_008451801.1| (PREDICTED: tricin synthase 1-like isoform X2 [Cucumis melo]) HSP 1 Score: 484.6 bits (1246), Expect = 1.3e-133 Identity = 250/295 (84.75%), Postives = 270/295 (91.53%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. NCBI nr
Match: gi|778691409|ref|XP_004147767.2| (PREDICTED: tricin synthase 1-like [Cucumis sativus]) HSP 1 Score: 468.8 bits (1205), Expect = 7.1e-129 Identity = 246/294 (83.67%), Postives = 263/294 (89.46%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. NCBI nr
Match: gi|659101803|ref|XP_008451802.1| (PREDICTED: tricin synthase 1-like isoform X3 [Cucumis melo]) HSP 1 Score: 456.1 bits (1172), Expect = 4.8e-125 Identity = 237/281 (84.34%), Postives = 256/281 (91.10%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. NCBI nr
Match: gi|659101799|ref|XP_008451798.1| (PREDICTED: tricin synthase 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 456.1 bits (1172), Expect = 4.8e-125 Identity = 237/281 (84.34%), Postives = 256/281 (91.10%), Query Frame = 1
BLAST of Cp4.1LG01g00860 vs. NCBI nr
Match: gi|659101805|ref|XP_008451803.1| (PREDICTED: tricin synthase 1-like isoform X4 [Cucumis melo]) HSP 1 Score: 455.7 bits (1171), Expect = 6.2e-125 Identity = 237/280 (84.64%), Postives = 255/280 (91.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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