CmaCh04G006420 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCACTCTAACCTCCTCCCCAAACCAGGACGATTAGTTGTGTGTCAATATGATGTCGAAGTTCTTGAGATTGCAAGAAGATATTACGAACGAGTTGGTGTTTGACATAAAGGAATTTTGTGTCAGATCCCATATCGGGTGGAGAGGAGAACGAAACATTCTTATATAGCGTAGAAATCTCTTCCTAACATACTAGTTTTAAAAATATTGAGAGAAAGTTTAAAAGGGAAAGTCTAGAGAAACAATATTTACTATCGTTGGCTAAAATCGTTACAAATGGTACCTAATCTAAATATCGAGTGATGTGCCAACGAGAAGATGCAATAATATTTACTATCGGAGGACTCATGTTACTCTAATGGGTTGATTGAGGGAAACCTTGTGATTTTTCGTTTTTATGTAGATCAGAATCAGAGCAGGATGCAACAAACGAGCTCCGAATCTTACCGGAGCTGGAACAGATAAGGAGAGTAATGGCGATGAATCTAATGACTTGCAAAGTTTAATCAAACGACGCCGTGTGAACCTCTAGTGGCTATATCTGTAGCTGCGTGCCTTCTTCCCACCGGGCCGCAGTTCAGTGCGAGTCTTCAACTGGTTTCTTCTCAACAGGTACATTTTCTTTCTGGGCTTTGATGTCTTCCCTCTTCGTTTAATCTGCAAAGCTTTAACATTCTCTCGCATGGCTTCGCGTCATCCCCGCATGCCCACCAGCTGTTTGTAGAAATTCCCAACAGAGTATCTAATTTGTCGAGCTATAAAGTTAGTATACTATTGGGTTTTCTGTTTCCTACTTTTCTTCATCGCTTTCTGCTCCACCCTGCAGTGCATATCGTTCTTTGATGATGTCAAGCAGCAATATGGGGCTGCGTTTTTTGTCATACCCACAAAGGAATCTGCTTATGAAGCTCTCATCTATGCCCTCAGTGGCTGCAATTGCCAGCTTCGGAACTATCAAAAGGGCTATGGCTTGCAGGCGTGTTCGTTGTCATTTGAACTTGGATGATTCCAGCAGCAAGAAGAGGCAGCTGGAAAGGGTTTGTTCCGCCAATTCAAATGGGAAATTTAGCAATAAAGAGTTCATTAGTGTTGACTCACGGCTTTATGAGTATATCCTCTCCAATGTTCGAGAGCCTGAGGTACAATGTTGTTGCTCATCTATATGTTAAGTACTTTATGATCTGTCCTATTGTAATTGAATTCGTTGATTTAGATCTTGGGGCAACTTCGTGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTAACATTTTCGTTCATTTACCGTTTTCAAATGTACGATTGAATGGATGAACTGGTGTTCTAGGTATCGCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAAATTCTCGGTGCAAAGCGGTGCATCGAAGTGGGTGTTTACACTGTAAGCCCCTTCGTCCCATTCTTACTGCTTAATAACAAGGTTTTGTTTTGAAGAGTGCTATAACTTTAGGGCTAACCATTGTTTTCTATTCTCATTTAGGGATATTCATCTCTGGCCGTAGCGTTAGTCCTTCCAGAATCAGGGCGCTTAGTTGCCTGTGAAAGGGATGCTATATATCTCGATGTTGCTAGAAAATATTATGAACTTGCCGGTGTTTCTCACAAGGTAAGTACTTCTTCATTTGATGTTCTCTGGTTCTTCTTTTATCAAATGATTATGAACAGTGACATGAATCTTTTGAGAAATACTATCTTCCTATTTTTCTGCTCATAATCTGCAACTTTCATATTGTAATAGCTCCTACATGATTTTGCAACCAATGTATTCTATTTGAGCTGTAAACTGTTTGAAGCCAAATTTTTGGTTAGCTCCAGCTAGTATATTTCCTTTTTACTGACGGCATTGTATAACTAAAACTGATATTGTGAGATACCACGTGATTGAGAGGGGAACAAACGAAACATTCTTTATAAGGGTGTGGAAATCTCTCCCTATCATATGCGTTTTAAAAACCTTGAGGGGAAAGCCCAAAGAGGACAATATCTGCTAACGGTAGGCTTGTGCTGTTACAAATGATATTAGAGCCAGACACTGGGTAGTGCACCAGCGAGGACGCTAAGCCCCGAAAGGGAGTAGACACCGAGTGATGTGCCAACGAGGATGCTGAACCATGAGGGGGATGGATTGTGAGATCCCACGTCGATTGGGAAGGGAAATAAAACATTTTTTATTAGGGTGTGACAACCTCTCCCTAACAGATGCATTTTAAAAACCTTGAAAAGAAGCCTAGAAGGGAAAACCCAAGGAAGACCTTGAGGGTGTGGAGACCTCTCCCTAACAGACGCATTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAACCGAAGGAAGACAATATCGGCTAGTGGTGGGCTTGGGCTGATGCTCCAATTAATTAACCGGGAGATTTGAGAAAGGCCATTCATTTAATCAGATTCCTCAAATTTTAGACCAGCCATACAGTATACCCTCTTGTGGGTATACAAAGATCGATCAATTTCCTGTATTTATGTTCATAATTTTAAGCTATAACATGTTTCTGATGATCAAAACATGGTTTTGGACAATTTCTGGAAGTAGGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTGGCAGGTGAAGTGTTTTATGTTATATCATGTTTTGATTCAAAAACTTGTTTCGTTAGTTGATGGAATGATCTTATAATGCTTCTATTAGATTTTGTTATAACTATCCCATTATGTTCTTTCTTTTACATTCTTGGCGATTTAATATGATATCAGAGTTAAAAGGGCGAGCTTTAAACTTCTGTGATTTTACTTCCTCCGATGGCCTTTTTACAAAGAATTGAGTAGATAACATATTTCTGTGCACGTATAGTTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAACGAGGAGTACTTCGAACTGCTACTGCAACTGGTGAGACGAAAAATGATTAGCTTCTGCCAAAAAATCTGTTTATGTCTGTCTAATGGTTTTATCTGATAGCCTATCTTTTCAGTCCATGATGTTTAAGTAAGTTCTTCATCGCCTTCATTCAGGTGAGAGTTGGAGGTATAATTGTGATTGATAATGTCCTTTGGTATGGAAAAGTAGCTGACCCAACGGTGCGTTAGCTTCGACATCTCGTGACATTGTCTCCATTTTAGTGTAGTTTACTGATGATCATGGTCTTTGAGCAGGTAAATGACAAGCAGACTGATAGCATTAGGAGATTGAATAAAAAGATAATGGAAGACGATCGAGTCGGGATTAGTATAGTGAGCATTTGATCTTATCTTCCCTCTGCTAGCCTCCTTGAACTATGACGATGGTACTAAACTTGGTTTATTTAGGTACCCATTGGCGATGGCATGACAATTTGCCAGAAGAGATGAATGGTGTCTGCTGAATTTGAGGGCGTAGCACTAGGCAAAGCAGTGCATAAATGAATTTGAGTTCACTTTTGTGGATAAATATTTTATTTTCCTTTTGTGAATGTATTTCTGTAGGATGTTGGAATATAATGCCATGTGGTATGATAATATCTGCCAATCATTGATGTATAATCATCGAGAGCTATATAATACAATAT ATGTTCACTCTAACCTCCTCCCCAAACCAGGACGATTAATCAGAATCAGAGCAGGATGCAACAAACGAGCTCCGAATCTTACCGGAGCTGGAACAGATAAGGAGACTGCGTGCCTTCTTCCCACCGGGCCGCAGTTCAGTGCGAGTCTTCAACTGGTTTCTTCTCAACAGTGCATATCGTTCTTTGATGATGTCAAGCAGCAATATGGGGCTGCGTTTTTTGTCATACCCACAAAGGAATCTGCTTATGAAGCTCTCATCTATGCCCTCAGTGGCTGCAATTGCCAGCTTCGGAACTATCAAAAGGGCTATGGCTTGCAGGCGTGTTCGTTGTCATTTGAACTTGGATGATTCCAGCAGCAAGAAGAGGCAGCTGGAAAGGGTTTGTTCCGCCAATTCAAATGGGAAATTTAGCAATAAAGAGTTCATTAGTGTTGACTCACGGCTTTATGAGTATATCCTCTCCAATGTTCGAGAGCCTGAGATCTTGGGGCAACTTCGTGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCGCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAAATTCTCGGTGCAAAGCGGTGCATCGAAGTGGGTGTTTACACTGGATATTCATCTCTGGCCGTAGCGTTAGTCCTTCCAGAATCAGGGCGCTTAGTTGCCTGTGAAAGGGATGCTATATATCTCGATGTTGCTAGAAAATATTATGAACTTGCCGGTGTTTCTCACAAGGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTGGCAGTTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAACGAGGAGTACTTCGAACTGCTACTGCAACTGGTGAGAGTTGGAGGTATAATTGTGATTGATAATGTCCTTTGGTATGGAAAAGTAGCTGACCCAACGGTAAATGACAAGCAGACTGATAGCATTAGGAGATTGAATAAAAAGATAATGGAAGACGATCGAGTCGGGATTAGTATAGTACCCATTGGCGATGGCATGACAATTTGCCAGAAGAGATGAATGGTGTCTGCTGAATTTGAGGGCGTAGCACTAGGCAAAGCAGTGCATAAATGAATTTGAGTTCACTTTTGTGGATAAATATTTTATTTTCCTTTTGTGAATGTATTTCTGTAGGATGTTGGAATATAATGCCATGTGGTATGATAATATCTGCCAATCATTGATGTATAATCATCGAGAGCTATATAATACAATAT ATGATGTCAAGCAGCAATATGGGGCTGCGTTTTTTGTCATACCCACAAAGGAATCTGCTTATGAAGCTCTCATCTATGCCCTCAGTGGCTGCAATTGCCAGCTTCGGAACTATCAAAAGGGCTATGGCTTGCAGGCGTGTTCGTTGTCATTTGAACTTGGATGATTCCAGCAGCAAGAAGAGGCAGCTGGAAAGGGTTTGTTCCGCCAATTCAAATGGGAAATTTAGCAATAAAGAGTTCATTAGTGTTGACTCACGGCTTTATGAGTATATCCTCTCCAATGTTCGAGAGCCTGAGATCTTGGGGCAACTTCGTGAGGAGACCGCCTCATTGCGTGGTAGCAAAATGCAGGTATCGCCTGATCAAGCACAACTTCTTGCAATGCTTGTTCAAATTCTCGGTGCAAAGCGGTGCATCGAAGTGGGTGTTTACACTGGATATTCATCTCTGGCCGTAGCGTTAGTCCTTCCAGAATCAGGGCGCTTAGTTGCCTGTGAAAGGGATGCTATATATCTCGATGTTGCTAGAAAATATTATGAACTTGCCGGTGTTTCTCACAAGGTGGATGTGAGACATGGGCTTGCAGCAGATACACTCAAATCACTTATTGCAAATGGTGAAGCTGGCAGTTATGATTTTGCGTTCATCGATGCCGAGAAGAGGATGAACGAGGAGTACTTCGAACTGCTACTGCAACTGGTGAGAGTTGGAGGTATAATTGTGATTGATAATGTCCTTTGGTATGGAAAAGTAGCTGACCCAACGGTAAATGACAAGCAGACTGATAGCATTAGGAGATTGAATAAAAAGATAATGGAAGACGATCGAGTCGGGATTAGTATAGTACCCATTGGCGATGGCATGACAATTTGCCAGAAGAGATGA MMSSSNMGLRFLSYPQRNLLMKLSSMPSVAAIASFGTIKRAMACRRVRCHLNLDDSSSKKRQLERVCSANSNGKFSNKEFISVDSRLYEYILSNVREPEILGQLREETASLRGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACERDAIYLDVARKYYELAGVSHKVDVRHGLAADTLKSLIANGEAGSYDFAFIDAEKRMNEEYFELLLQLVRVGGIIVIDNVLWYGKVADPTVNDKQTDSIRRLNKKIMEDDRVGISIVPIGDGMTICQKR
BLAST of CmaCh04G006420 vs. Swiss-Prot
Match: OMT15_ORYSJ (Tricin synthase 1 OS=Oryza sativa subsp. japonica GN=ROMT-15 PE=1 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 4.6e-43 Identity = 105/239 (43.93%), Postives = 147/239 (61.51%), Query Frame = 1
BLAST of CmaCh04G006420 vs. Swiss-Prot
Match: CMTD1_HUMAN (Catechol O-methyltransferase domain-containing protein 1 OS=Homo sapiens GN=COMTD1 PE=1 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 6.6e-42 Identity = 92/211 (43.60%), Postives = 135/211 (63.98%), Query Frame = 1
BLAST of CmaCh04G006420 vs. Swiss-Prot
Match: CAMT2_MAIZE (Caffeoyl-CoA O-methyltransferase 2 OS=Zea mays GN=CCOAOMT2 PE=2 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 4.7e-40 Identity = 105/254 (41.34%), Postives = 144/254 (56.69%), Query Frame = 1
BLAST of CmaCh04G006420 vs. Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase MdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.4e-39 Identity = 79/201 (39.30%), Postives = 131/201 (65.17%), Query Frame = 1
BLAST of CmaCh04G006420 vs. Swiss-Prot
Match: CAMT1_MAIZE (Caffeoyl-CoA O-methyltransferase 1 OS=Zea mays GN=CCOAOMT1 PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.4e-39 Identity = 104/249 (41.77%), Postives = 143/249 (57.43%), Query Frame = 1
BLAST of CmaCh04G006420 vs. TrEMBL
Match: A0A0A0L0A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G064680 PE=4 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 1.9e-128 Identity = 247/294 (84.01%), Postives = 262/294 (89.12%), Query Frame = 1
BLAST of CmaCh04G006420 vs. TrEMBL
Match: K7L7B7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G175700 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 3.6e-95 Identity = 181/256 (70.70%), Postives = 215/256 (83.98%), Query Frame = 1
BLAST of CmaCh04G006420 vs. TrEMBL
Match: A0A0B2QYP1_GLYSO (Tricin synthase 1 OS=Glycine soja GN=glysoja_011368 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 3.6e-95 Identity = 181/256 (70.70%), Postives = 215/256 (83.98%), Query Frame = 1
BLAST of CmaCh04G006420 vs. TrEMBL
Match: V7BXC3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G051900g PE=4 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 4.7e-95 Identity = 181/240 (75.42%), Postives = 211/240 (87.92%), Query Frame = 1
BLAST of CmaCh04G006420 vs. TrEMBL
Match: A0A061DSY3_THECC (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_004992 PE=4 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 6.1e-95 Identity = 181/244 (74.18%), Postives = 208/244 (85.25%), Query Frame = 1
BLAST of CmaCh04G006420 vs. TAIR10
Match: AT3G61990.1 (AT3G61990.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 318.2 bits (814), Expect = 5.5e-87 Identity = 162/221 (73.30%), Postives = 192/221 (86.88%), Query Frame = 1
BLAST of CmaCh04G006420 vs. TAIR10
Match: AT3G62000.2 (AT3G62000.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 312.4 bits (799), Expect = 3.0e-85 Identity = 154/209 (73.68%), Postives = 187/209 (89.47%), Query Frame = 1
BLAST of CmaCh04G006420 vs. TAIR10
Match: AT4G26220.1 (AT4G26220.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39 Identity = 92/219 (42.01%), Postives = 129/219 (58.90%), Query Frame = 1
BLAST of CmaCh04G006420 vs. TAIR10
Match: AT4G34050.1 (AT4G34050.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 160.6 bits (405), Expect = 1.5e-39 Identity = 93/224 (41.52%), Postives = 133/224 (59.38%), Query Frame = 1
BLAST of CmaCh04G006420 vs. TAIR10
Match: AT1G67990.1 (AT1G67990.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36 Identity = 90/232 (38.79%), Postives = 135/232 (58.19%), Query Frame = 1
BLAST of CmaCh04G006420 vs. NCBI nr
Match: gi|659101801|ref|XP_008451801.1| (PREDICTED: tricin synthase 1-like isoform X2 [Cucumis melo]) HSP 1 Score: 483.0 bits (1242), Expect = 3.6e-133 Identity = 251/295 (85.08%), Postives = 269/295 (91.19%), Query Frame = 1
BLAST of CmaCh04G006420 vs. NCBI nr
Match: gi|778691409|ref|XP_004147767.2| (PREDICTED: tricin synthase 1-like [Cucumis sativus]) HSP 1 Score: 466.8 bits (1200), Expect = 2.7e-128 Identity = 247/294 (84.01%), Postives = 262/294 (89.12%), Query Frame = 1
BLAST of CmaCh04G006420 vs. NCBI nr
Match: gi|659101803|ref|XP_008451802.1| (PREDICTED: tricin synthase 1-like isoform X3 [Cucumis melo]) HSP 1 Score: 454.1 bits (1167), Expect = 1.8e-124 Identity = 238/281 (84.70%), Postives = 255/281 (90.75%), Query Frame = 1
BLAST of CmaCh04G006420 vs. NCBI nr
Match: gi|659101799|ref|XP_008451798.1| (PREDICTED: tricin synthase 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 454.1 bits (1167), Expect = 1.8e-124 Identity = 238/281 (84.70%), Postives = 255/281 (90.75%), Query Frame = 1
BLAST of CmaCh04G006420 vs. NCBI nr
Match: gi|659101805|ref|XP_008451803.1| (PREDICTED: tricin synthase 1-like isoform X4 [Cucumis melo]) HSP 1 Score: 453.8 bits (1166), Expect = 2.4e-124 Identity = 238/280 (85.00%), Postives = 254/280 (90.71%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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