Cp4.1LG01g00690 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g00690
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptioncationic amino acid transporter 8
LocationCp4.1LG01 : 3398946 .. 3400466 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAACACTGATATCTCCGATTTTGTTCGGATTAAGGTGAGTTTCTTTCCAGATGTGTTTAATCTTCTTGATCCAGCTACTGTTGTTGTGCTTCTTGTTACTGATGGTATTCATATGAGTGGAACGAGGAGAACATCTTTCTTGATATGGATAACTTCTGTGGTTAGTAGTTTGCTTATTGTTCTTTTTATTGTGGTTGGATTTGTTGGGGGAGTTCTTCAATTTTGTTATCCTTTTTCCCTTTCGGTGCAAAGGGAGCTGCAGCTGTTGTTTACTGGTTTTTGATATGGTGGCCTCCATTGTTGAGGAAAACAAGCAACCTTCAAGAGATATGCCGGTGGGTTTGATTGGATTAATGTCTATGATCTCTGTGTTCTGGTGCTTGATGGCATTGTCATTATTAATGCTACAAAAATATACCGTGATAAATAGGAATGCGGCATTTTCCGTTGCATTTGATAAAATTGGGATCATATAGGCTAAATAGTTGGTTCGCATAATTGCTATCAAGGTAATGACTTCAAGATTGTTGGTGGAATCTTTAGGGCAAGCTCGCATGTAATAGCCCAAGCCGCATATTGTTCTCGTCGGGCTTTTTCTATTGGGCTTCCCCTCAAAGTTTTAAAATAGGATTCCAAACCCTTACAACGAATGTTTTGTTCTCCTCTCAACCGAGGTGAGATCTTACCATCCACCCCCATGGGGCCAATGTCCTCATTGGCACACTGCTTAGTGTCCGACTCTGATACCATTTGTAAGAGCCCAAGCCCACCGCTAGTAGATATTATTCTCTCTGAACTTTCCCTTCTAGGCTTTCCCTCCCTCTGCTAGAGAGAGGCCTCCACACCTTCATAAGGAATGTTTGTTCCCCTCTCCAACCGATGTAGGATCTCACATCGATACACCATTCAGATTGCTAGGGTCCATCTATTTCCACCCCTCTTCGCCTTGGTTCATCCGAAAACGGGAACTCCTATCTTATGCTACTCTTTTGACAACCATAACTAGTTCAATGGTTGCATTTTTCTCTAGTTTGGGCATCTTGTCAAGTGTTTTTCATCCAGCACACTAACCATTTTTATGCCTGGCTGTTCCATTGCACTCACAAGACTTACTACGTTAAGGACACGACACCAAGAAGTGATTATATCAAGTTTATTGCTTGCTTGTTTATCATTTTTGGTTCTTGTATAACGTTGGCAGTAGTTTGAAATTTGGATAGGCAAGGATGGATTGAATATGCTGTACCTGCCTCCTTTTGATTTCTTAGCCCCTGGCTATGACGTTCCTTACCAAGTACCGATTGCCATCGGTTTGGAGCGTCCCTCTTGTTCCCCCATTCCCATCACTGTCTATAGGGACGAACCTCTTATTGGATCTTTGGGTAGTGTGGCATTCTTGAGGTTCTTCATTTGCAGTGCAGTAATGCGTCTGTACTATTTCTTTGTTGGTCTTCTTGCCACATATGATGTAGCCCATCAAGATGGCTTAGGTTCCCAGAATGAGGAGAGAAAATAG

mRNA sequence

ATGATCAACACTGATATCTCCGATTTTGTTCGGATTAAGGTGAGTTTCTTTCCAGATGTGTTTAATCTTCTTGATCCAGCTACTGTTGTTGTGCTTCTTGTTACTGATGGTATTCATATGAGTGGAACGAGGAGAACATCTTTCTTGATATGGATAACTTCTGTGTTTGAAATTTGGATAGGCAAGGATGGATTGAATATGCTGTACCTGCCTCCTTTTGATTTCTTAGCCCCTGGCTATGACGTTCCTTACCAAGTACCGATTGCCATCGGTTTGGAGCGTCCCTCTTGTTCCCCCATTCCCATCACTGTCTATAGGGACGAACCTCTTATTGGATCTTTGGGTAGTGTGGCATTCTTGAGGTTCTTCATTTGCAGTGCAGTAATGCGTCTGTACTATTTCTTTGTTGGTCTTCTTGCCACATATGATGTAGCCCATCAAGATGGCTTAGGTTCCCAGAATGAGGAGAGAAAATAG

Coding sequence (CDS)

ATGATCAACACTGATATCTCCGATTTTGTTCGGATTAAGGTGAGTTTCTTTCCAGATGTGTTTAATCTTCTTGATCCAGCTACTGTTGTTGTGCTTCTTGTTACTGATGGTATTCATATGAGTGGAACGAGGAGAACATCTTTCTTGATATGGATAACTTCTGTGTTTGAAATTTGGATAGGCAAGGATGGATTGAATATGCTGTACCTGCCTCCTTTTGATTTCTTAGCCCCTGGCTATGACGTTCCTTACCAAGTACCGATTGCCATCGGTTTGGAGCGTCCCTCTTGTTCCCCCATTCCCATCACTGTCTATAGGGACGAACCTCTTATTGGATCTTTGGGTAGTGTGGCATTCTTGAGGTTCTTCATTTGCAGTGCAGTAATGCGTCTGTACTATTTCTTTGTTGGTCTTCTTGCCACATATGATGTAGCCCATCAAGATGGCTTAGGTTCCCAGAATGAGGAGAGAAAATAG

Protein sequence

MINTDISDFVRIKVSFFPDVFNLLDPATVVVLLVTDGIHMSGTRRTSFLIWITSVFEIWIGKDGLNMLYLPPFDFLAPGYDVPYQVPIAIGLERPSCSPIPITVYRDEPLIGSLGSVAFLRFFICSAVMRLYYFFVGLLATYDVAHQDGLGSQNEERK
BLAST of Cp4.1LG01g00690 vs. Swiss-Prot
Match: CAAT8_ARATH (Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana GN=CAT8 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.0e-10
Identity = 55/121 (45.45%), Postives = 66/121 (54.55%), Query Frame = 1

Query: 32  LLVTDGIHMSGTRRTSFLIWI--TSVFEIW-IGKDGLNMLYLPPFDFLAPGYDVP--YQV 91
           L++   I +S    +    WI  T    IW IG  GL +L         P Y VP  + V
Sbjct: 475 LIIASSIGVSALWNSGVKGWIAYTVTGVIWFIGTLGLALL---------PKYRVPKVWGV 534

Query: 92  PIAIGLERPSCSPIPITVYRDEPLIGSLGSVAFLRFFICSAVMRLYYFFVGLLATYDVAH 148
           P+   L  PS S I + ++    LIGSLG VAFLRF IC+ VM LYY FVGL ATYDVAH
Sbjct: 535 PLVPWL--PSFS-IAMNLF----LIGSLGYVAFLRFIICTMVMLLYYLFVGLHATYDVAH 579

BLAST of Cp4.1LG01g00690 vs. Swiss-Prot
Match: CAAT5_ARATH (Cationic amino acid transporter 5 OS=Arabidopsis thaliana GN=CAT5 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.3e-06
Identity = 23/38 (60.53%), Postives = 32/38 (84.21%), Query Frame = 1

Query: 110 LIGSLGSVAFLRFFICSAVMRLYYFFVGLLATYDVAHQ 148
           L+GSLG++AF+RF +C+  M LYYF +GL AT+D+AHQ
Sbjct: 526 LMGSLGAMAFVRFGVCTLAMLLYYFLLGLHATFDMAHQ 563

BLAST of Cp4.1LG01g00690 vs. TrEMBL
Match: A0A0A0KVH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G075190 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-13
Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 1

Query: 110 LIGSLGSVAFLRFFICSAVMRLYYFFVGLLATYDVAHQDGLGSQNEERK 159
           LIGSLG+ AFLRFFICSAVM LYY F+GL ATYDVAHQDGLGS+NEE K
Sbjct: 539 LIGSLGTEAFLRFFICSAVMLLYYLFIGLHATYDVAHQDGLGSKNEEIK 587

BLAST of Cp4.1LG01g00690 vs. TrEMBL
Match: F6HF22_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02880 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.0e-11
Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 1

Query: 1   MINTDISDFVRIKVSFFPDVFNLLDPATVVVLLVTDGIHMSGTRRTSFLIWITSVFEIWI 60
           MINTD +DF+RI+VS+F D FNLLDP   VVLL+ DGI MSGTRRTS L WI+SV    +
Sbjct: 180 MINTD-TDFLRIRVSYFADGFNLLDPIAAVVLLIADGIAMSGTRRTSILNWISSVLSFMV 238

BLAST of Cp4.1LG01g00690 vs. TrEMBL
Match: A5B733_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020011 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.0e-11
Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 1

Query: 1   MINTDISDFVRIKVSFFPDVFNLLDPATVVVLLVTDGIHMSGTRRTSFLIWITSVFEIWI 60
           MINTD +DF+RI+VS+F D FNLLDP   VVLL+ DGI MSGTRRTS L WI+SV    +
Sbjct: 161 MINTD-TDFLRIRVSYFADGFNLLDPIAAVVLLIADGIAMSGTRRTSILNWISSVLSFMV 219

BLAST of Cp4.1LG01g00690 vs. TrEMBL
Match: B9RY28_RICCO (Cationic amino acid transporter, putative OS=Ricinus communis GN=RCOM_0814060 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.7e-09
Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 1

Query: 1   MINTDISDFVRIKVSFFPDVFNLLDPATVVVLLVTDGIHMSGTRRTSFLIWITSV 56
           MINT  SDF+RI++  FPD FNLLDP  VVVLLV + I M+GT+RTS L W++SV
Sbjct: 177 MINTKNSDFLRIRIDSFPDGFNLLDPIAVVVLLVANTIAMTGTKRTSTLNWLSSV 231

BLAST of Cp4.1LG01g00690 vs. TrEMBL
Match: B9GGW9_POPTR (Cationic amino acid transporter 8 family protein OS=Populus trichocarpa GN=POPTR_0001s38770g PE=4 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 6.1e-09
Identity = 36/60 (60.00%), Postives = 43/60 (71.67%), Query Frame = 1

Query: 1   MINTDISDFVRIKVSFFPDVFNLLDPATVVVLLVTDGIHMSGTRRTSFLIWITSVFEIWI 60
           MIN+   DF+RIK+  F D FNLLDP  VVVLLV + I MSGT+RTSFL WI S+   +I
Sbjct: 205 MINSKNPDFMRIKIDSFADGFNLLDPLAVVVLLVANSIAMSGTKRTSFLNWIASIATAFI 264

BLAST of Cp4.1LG01g00690 vs. TAIR10
Match: AT1G17120.1 (AT1G17120.1 cationic amino acid transporter 8)

HSP 1 Score: 65.1 bits (157), Expect = 4.5e-11
Identity = 55/121 (45.45%), Postives = 66/121 (54.55%), Query Frame = 1

Query: 32  LLVTDGIHMSGTRRTSFLIWI--TSVFEIW-IGKDGLNMLYLPPFDFLAPGYDVP--YQV 91
           L++   I +S    +    WI  T    IW IG  GL +L         P Y VP  + V
Sbjct: 475 LIIASSIGVSALWNSGVKGWIAYTVTGVIWFIGTLGLALL---------PKYRVPKVWGV 534

Query: 92  PIAIGLERPSCSPIPITVYRDEPLIGSLGSVAFLRFFICSAVMRLYYFFVGLLATYDVAH 148
           P+   L  PS S I + ++    LIGSLG VAFLRF IC+ VM LYY FVGL ATYDVAH
Sbjct: 535 PLVPWL--PSFS-IAMNLF----LIGSLGYVAFLRFIICTMVMLLYYLFVGLHATYDVAH 579

BLAST of Cp4.1LG01g00690 vs. TAIR10
Match: AT2G34960.1 (AT2G34960.1 cationic amino acid transporter 5)

HSP 1 Score: 52.4 bits (124), Expect = 3.0e-07
Identity = 23/38 (60.53%), Postives = 32/38 (84.21%), Query Frame = 1

Query: 110 LIGSLGSVAFLRFFICSAVMRLYYFFVGLLATYDVAHQ 148
           L+GSLG++AF+RF +C+  M LYYF +GL AT+D+AHQ
Sbjct: 526 LMGSLGAMAFVRFGVCTLAMLLYYFLLGLHATFDMAHQ 563

BLAST of Cp4.1LG01g00690 vs. NCBI nr
Match: gi|449439077|ref|XP_004137314.1| (PREDICTED: cationic amino acid transporter 8, vacuolar [Cucumis sativus])

HSP 1 Score: 83.2 bits (204), Expect = 4.5e-13
Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 1

Query: 110 LIGSLGSVAFLRFFICSAVMRLYYFFVGLLATYDVAHQDGLGSQNEERK 159
           LIGSLG+ AFLRFFICSAVM LYY F+GL ATYDVAHQDGLGS+NEE K
Sbjct: 539 LIGSLGTEAFLRFFICSAVMLLYYLFIGLHATYDVAHQDGLGSKNEEIK 587

BLAST of Cp4.1LG01g00690 vs. NCBI nr
Match: gi|659101774|ref|XP_008451786.1| (PREDICTED: cationic amino acid transporter 8, vacuolar [Cucumis melo])

HSP 1 Score: 79.7 bits (195), Expect = 5.0e-12
Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 1

Query: 110 LIGSLGSVAFLRFFICSAVMRLYYFFVGLLATYDVAHQDGLGSQNEERK 159
           LIGSLG+ AFLRFFICSA+M LYY FV + ATYDVAHQDGLGS+NEE K
Sbjct: 539 LIGSLGAAAFLRFFICSALMLLYYLFVAVHATYDVAHQDGLGSKNEEIK 587

BLAST of Cp4.1LG01g00690 vs. NCBI nr
Match: gi|147860151|emb|CAN78727.1| (hypothetical protein VITISV_020011 [Vitis vinifera])

HSP 1 Score: 75.9 bits (185), Expect = 7.2e-11
Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 1

Query: 1   MINTDISDFVRIKVSFFPDVFNLLDPATVVVLLVTDGIHMSGTRRTSFLIWITSVFEIWI 60
           MINTD +DF+RI+VS+F D FNLLDP   VVLL+ DGI MSGTRRTS L WI+SV    +
Sbjct: 161 MINTD-TDFLRIRVSYFADGFNLLDPIAAVVLLIADGIAMSGTRRTSILNWISSVLSFMV 219

BLAST of Cp4.1LG01g00690 vs. NCBI nr
Match: gi|225423859|ref|XP_002278606.1| (PREDICTED: cationic amino acid transporter 8, vacuolar-like [Vitis vinifera])

HSP 1 Score: 75.9 bits (185), Expect = 7.2e-11
Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 1

Query: 1   MINTDISDFVRIKVSFFPDVFNLLDPATVVVLLVTDGIHMSGTRRTSFLIWITSVFEIWI 60
           MINTD +DF+RI+VS+F D FNLLDP   VVLL+ DGI MSGTRRTS L WI+SV    +
Sbjct: 180 MINTD-TDFLRIRVSYFADGFNLLDPIAAVVLLIADGIAMSGTRRTSILNWISSVLSFMV 238

BLAST of Cp4.1LG01g00690 vs. NCBI nr
Match: gi|297737874|emb|CBI27075.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 75.9 bits (185), Expect = 7.2e-11
Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 1

Query: 1   MINTDISDFVRIKVSFFPDVFNLLDPATVVVLLVTDGIHMSGTRRTSFLIWITSVFEIWI 60
           MINTD +DF+RI+VS+F D FNLLDP   VVLL+ DGI MSGTRRTS L WI+SV    +
Sbjct: 170 MINTD-TDFLRIRVSYFADGFNLLDPIAAVVLLIADGIAMSGTRRTSILNWISSVLSFMV 228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CAAT8_ARATH8.0e-1045.45Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana GN=CAT8 PE=2... [more]
CAAT5_ARATH5.3e-0660.53Cationic amino acid transporter 5 OS=Arabidopsis thaliana GN=CAT5 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KVH5_CUCSA3.1e-1383.67Uncharacterized protein OS=Cucumis sativus GN=Csa_4G075190 PE=4 SV=1[more]
F6HF22_VITVI5.0e-1165.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02880 PE=4 SV=... [more]
A5B733_VITVI5.0e-1165.00Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020011 PE=4 SV=1[more]
B9RY28_RICCO4.7e-0963.64Cationic amino acid transporter, putative OS=Ricinus communis GN=RCOM_0814060 PE... [more]
B9GGW9_POPTR6.1e-0960.00Cationic amino acid transporter 8 family protein OS=Populus trichocarpa GN=POPTR... [more]
Match NameE-valueIdentityDescription
AT1G17120.14.5e-1145.45 cationic amino acid transporter 8[more]
AT2G34960.13.0e-0760.53 cationic amino acid transporter 5[more]
Match NameE-valueIdentityDescription
gi|449439077|ref|XP_004137314.1|4.5e-1383.67PREDICTED: cationic amino acid transporter 8, vacuolar [Cucumis sativus][more]
gi|659101774|ref|XP_008451786.1|5.0e-1279.59PREDICTED: cationic amino acid transporter 8, vacuolar [Cucumis melo][more]
gi|147860151|emb|CAN78727.1|7.2e-1165.00hypothetical protein VITISV_020011 [Vitis vinifera][more]
gi|225423859|ref|XP_002278606.1|7.2e-1165.00PREDICTED: cationic amino acid transporter 8, vacuolar-like [Vitis vinifera][more]
gi|297737874|emb|CBI27075.3|7.2e-1165.00unnamed protein product [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015171amino acid transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0003333amino acid transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR002293AA/rel_permease1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0003333 amino acid transmembrane transport
biological_process GO:0009741 response to brassinosteroid
biological_process GO:0008150 biological_process
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0015171 amino acid transmembrane transporter activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0022857 transmembrane transporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g00690.1Cp4.1LG01g00690.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002293Amino acid/polyamine transporter IPANTHERPTHR11785AMINO ACID TRANSPORTERcoord: 110..148
score: 6.9
NoneNo IPR availablePANTHERPTHR11785:SF273CATIONIC AMINO ACID TRANSPORTER 8, VACUOLARcoord: 110..148
score: 6.9

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g00690CmaCh04G006500Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g00690MELO3C016149.2Melon (DHL92) v3.6.1cpemedB495
Cp4.1LG01g00690Bhi01G002448Wax gourdcpewgoB0509
Cp4.1LG01g00690Carg13101Silver-seed gourdcarcpeB0061
Cp4.1LG01g00690Carg11377Silver-seed gourdcarcpeB0929
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g00690Cp4.1LG14g03400Cucurbita pepo (Zucchini)cpecpeB236