Cp4.1LG01g00690 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCAACACTGATATCTCCGATTTTGTTCGGATTAAGGTGAGTTTCTTTCCAGATGTGTTTAATCTTCTTGATCCAGCTACTGTTGTTGTGCTTCTTGTTACTGATGGTATTCATATGAGTGGAACGAGGAGAACATCTTTCTTGATATGGATAACTTCTGTGGTTAGTAGTTTGCTTATTGTTCTTTTTATTGTGGTTGGATTTGTTGGGGGAGTTCTTCAATTTTGTTATCCTTTTTCCCTTTCGGTGCAAAGGGAGCTGCAGCTGTTGTTTACTGGTTTTTGATATGGTGGCCTCCATTGTTGAGGAAAACAAGCAACCTTCAAGAGATATGCCGGTGGGTTTGATTGGATTAATGTCTATGATCTCTGTGTTCTGGTGCTTGATGGCATTGTCATTATTAATGCTACAAAAATATACCGTGATAAATAGGAATGCGGCATTTTCCGTTGCATTTGATAAAATTGGGATCATATAGGCTAAATAGTTGGTTCGCATAATTGCTATCAAGGTAATGACTTCAAGATTGTTGGTGGAATCTTTAGGGCAAGCTCGCATGTAATAGCCCAAGCCGCATATTGTTCTCGTCGGGCTTTTTCTATTGGGCTTCCCCTCAAAGTTTTAAAATAGGATTCCAAACCCTTACAACGAATGTTTTGTTCTCCTCTCAACCGAGGTGAGATCTTACCATCCACCCCCATGGGGCCAATGTCCTCATTGGCACACTGCTTAGTGTCCGACTCTGATACCATTTGTAAGAGCCCAAGCCCACCGCTAGTAGATATTATTCTCTCTGAACTTTCCCTTCTAGGCTTTCCCTCCCTCTGCTAGAGAGAGGCCTCCACACCTTCATAAGGAATGTTTGTTCCCCTCTCCAACCGATGTAGGATCTCACATCGATACACCATTCAGATTGCTAGGGTCCATCTATTTCCACCCCTCTTCGCCTTGGTTCATCCGAAAACGGGAACTCCTATCTTATGCTACTCTTTTGACAACCATAACTAGTTCAATGGTTGCATTTTTCTCTAGTTTGGGCATCTTGTCAAGTGTTTTTCATCCAGCACACTAACCATTTTTATGCCTGGCTGTTCCATTGCACTCACAAGACTTACTACGTTAAGGACACGACACCAAGAAGTGATTATATCAAGTTTATTGCTTGCTTGTTTATCATTTTTGGTTCTTGTATAACGTTGGCAGTAGTTTGAAATTTGGATAGGCAAGGATGGATTGAATATGCTGTACCTGCCTCCTTTTGATTTCTTAGCCCCTGGCTATGACGTTCCTTACCAAGTACCGATTGCCATCGGTTTGGAGCGTCCCTCTTGTTCCCCCATTCCCATCACTGTCTATAGGGACGAACCTCTTATTGGATCTTTGGGTAGTGTGGCATTCTTGAGGTTCTTCATTTGCAGTGCAGTAATGCGTCTGTACTATTTCTTTGTTGGTCTTCTTGCCACATATGATGTAGCCCATCAAGATGGCTTAGGTTCCCAGAATGAGGAGAGAAAATAG ATGATCAACACTGATATCTCCGATTTTGTTCGGATTAAGGTGAGTTTCTTTCCAGATGTGTTTAATCTTCTTGATCCAGCTACTGTTGTTGTGCTTCTTGTTACTGATGGTATTCATATGAGTGGAACGAGGAGAACATCTTTCTTGATATGGATAACTTCTGTGTTTGAAATTTGGATAGGCAAGGATGGATTGAATATGCTGTACCTGCCTCCTTTTGATTTCTTAGCCCCTGGCTATGACGTTCCTTACCAAGTACCGATTGCCATCGGTTTGGAGCGTCCCTCTTGTTCCCCCATTCCCATCACTGTCTATAGGGACGAACCTCTTATTGGATCTTTGGGTAGTGTGGCATTCTTGAGGTTCTTCATTTGCAGTGCAGTAATGCGTCTGTACTATTTCTTTGTTGGTCTTCTTGCCACATATGATGTAGCCCATCAAGATGGCTTAGGTTCCCAGAATGAGGAGAGAAAATAG ATGATCAACACTGATATCTCCGATTTTGTTCGGATTAAGGTGAGTTTCTTTCCAGATGTGTTTAATCTTCTTGATCCAGCTACTGTTGTTGTGCTTCTTGTTACTGATGGTATTCATATGAGTGGAACGAGGAGAACATCTTTCTTGATATGGATAACTTCTGTGTTTGAAATTTGGATAGGCAAGGATGGATTGAATATGCTGTACCTGCCTCCTTTTGATTTCTTAGCCCCTGGCTATGACGTTCCTTACCAAGTACCGATTGCCATCGGTTTGGAGCGTCCCTCTTGTTCCCCCATTCCCATCACTGTCTATAGGGACGAACCTCTTATTGGATCTTTGGGTAGTGTGGCATTCTTGAGGTTCTTCATTTGCAGTGCAGTAATGCGTCTGTACTATTTCTTTGTTGGTCTTCTTGCCACATATGATGTAGCCCATCAAGATGGCTTAGGTTCCCAGAATGAGGAGAGAAAATAG MINTDISDFVRIKVSFFPDVFNLLDPATVVVLLVTDGIHMSGTRRTSFLIWITSVFEIWIGKDGLNMLYLPPFDFLAPGYDVPYQVPIAIGLERPSCSPIPITVYRDEPLIGSLGSVAFLRFFICSAVMRLYYFFVGLLATYDVAHQDGLGSQNEERK
BLAST of Cp4.1LG01g00690 vs. Swiss-Prot
Match: CAAT8_ARATH (Cationic amino acid transporter 8, vacuolar OS=Arabidopsis thaliana GN=CAT8 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 8.0e-10 Identity = 55/121 (45.45%), Postives = 66/121 (54.55%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. Swiss-Prot
Match: CAAT5_ARATH (Cationic amino acid transporter 5 OS=Arabidopsis thaliana GN=CAT5 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 5.3e-06 Identity = 23/38 (60.53%), Postives = 32/38 (84.21%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. TrEMBL
Match: A0A0A0KVH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G075190 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.1e-13 Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. TrEMBL
Match: F6HF22_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02880 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.0e-11 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. TrEMBL
Match: A5B733_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020011 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.0e-11 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. TrEMBL
Match: B9RY28_RICCO (Cationic amino acid transporter, putative OS=Ricinus communis GN=RCOM_0814060 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.7e-09 Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. TrEMBL
Match: B9GGW9_POPTR (Cationic amino acid transporter 8 family protein OS=Populus trichocarpa GN=POPTR_0001s38770g PE=4 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 6.1e-09 Identity = 36/60 (60.00%), Postives = 43/60 (71.67%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. TAIR10
Match: AT1G17120.1 (AT1G17120.1 cationic amino acid transporter 8) HSP 1 Score: 65.1 bits (157), Expect = 4.5e-11 Identity = 55/121 (45.45%), Postives = 66/121 (54.55%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. TAIR10
Match: AT2G34960.1 (AT2G34960.1 cationic amino acid transporter 5) HSP 1 Score: 52.4 bits (124), Expect = 3.0e-07 Identity = 23/38 (60.53%), Postives = 32/38 (84.21%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. NCBI nr
Match: gi|449439077|ref|XP_004137314.1| (PREDICTED: cationic amino acid transporter 8, vacuolar [Cucumis sativus]) HSP 1 Score: 83.2 bits (204), Expect = 4.5e-13 Identity = 41/49 (83.67%), Postives = 44/49 (89.80%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. NCBI nr
Match: gi|659101774|ref|XP_008451786.1| (PREDICTED: cationic amino acid transporter 8, vacuolar [Cucumis melo]) HSP 1 Score: 79.7 bits (195), Expect = 5.0e-12 Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. NCBI nr
Match: gi|147860151|emb|CAN78727.1| (hypothetical protein VITISV_020011 [Vitis vinifera]) HSP 1 Score: 75.9 bits (185), Expect = 7.2e-11 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. NCBI nr
Match: gi|225423859|ref|XP_002278606.1| (PREDICTED: cationic amino acid transporter 8, vacuolar-like [Vitis vinifera]) HSP 1 Score: 75.9 bits (185), Expect = 7.2e-11 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 1
BLAST of Cp4.1LG01g00690 vs. NCBI nr
Match: gi|297737874|emb|CBI27075.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 75.9 bits (185), Expect = 7.2e-11 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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