Cp4.1LG00g02130 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG00g02130
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG00 : 5821469 .. 5821999 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAATCGAGAATGCAAGTTCCCATTCTTCGACATATGTTACCAATTGTTCCATTTTATTATGAAAATCCTATCATCTAAAGCCCGAGAAACTGTTACTCTTGGAAACCCGGTGTCACATGATTCAAATGGTTCATCCCAAGAGCTCAGATCTGTGAATTCAGATCATTCTATTTCGTCTCTTAAGAATGATGTTCTTGATGAACTGGAGCTCCATTCGTCTAAAGACGATGATTCTTGTGTTACTCCATCGCATATCGAAGATAAGAATGATAAGAATCATCATTTTGTACCATTGCCTTCTACAATCAAACATGCTCCAAAGAAAATCGTGAGTATCAAGGAAACGGTTGAGGATATTGATTCTATTATGAAGGAAAGGAGGAAGAACAAAGGAGCAAAAAAGTCGAAATCTTTTGATTTTGATCATGAATATGATGGTTCCTTGAAGCCTACTCGGTCGATTCTCAAGGTTGGCTCATTAAACGATAAGTCAGATTTATTAAACTCTTTGAATCGTGTTGAGTAG

mRNA sequence

ATGGACAATCGAGAATGCAAGTTCCCATTCTTCGACATATGTTACCAATTGTTCCATTTTATTATGAAAATCCTATCATCTAAAGCCCGAGAAACTGTTACTCTTGGAAACCCGGTGTCACATGATTCAAATGGTTCATCCCAAGAGCTCAGATCTGTGAATTCAGATCATTCTATTTCGTCTCTTAAGAATGATGTTCTTGATGAACTGGAGCTCCATTCGTCTAAAGACGATGATTCTTGTGTTACTCCATCGCATATCGAAGATAAGAATGATAAGAATCATCATTTTGTACCATTGCCTTCTACAATCAAACATGCTCCAAAGAAAATCGTGAGTATCAAGGAAACGGTTGAGGATATTGATTCTATTATGAAGGAAAGGAGGAAGAACAAAGGAGCAAAAAAGTCGAAATCTTTTGATTTTGATCATGAATATGATGGTTCCTTGAAGCCTACTCGGTCGATTCTCAAGGTTGGCTCATTAAACGATAAGTCAGATTTATTAAACTCTTTGAATCGTGTTGAGTAG

Coding sequence (CDS)

ATGGACAATCGAGAATGCAAGTTCCCATTCTTCGACATATGTTACCAATTGTTCCATTTTATTATGAAAATCCTATCATCTAAAGCCCGAGAAACTGTTACTCTTGGAAACCCGGTGTCACATGATTCAAATGGTTCATCCCAAGAGCTCAGATCTGTGAATTCAGATCATTCTATTTCGTCTCTTAAGAATGATGTTCTTGATGAACTGGAGCTCCATTCGTCTAAAGACGATGATTCTTGTGTTACTCCATCGCATATCGAAGATAAGAATGATAAGAATCATCATTTTGTACCATTGCCTTCTACAATCAAACATGCTCCAAAGAAAATCGTGAGTATCAAGGAAACGGTTGAGGATATTGATTCTATTATGAAGGAAAGGAGGAAGAACAAAGGAGCAAAAAAGTCGAAATCTTTTGATTTTGATCATGAATATGATGGTTCCTTGAAGCCTACTCGGTCGATTCTCAAGGTTGGCTCATTAAACGATAAGTCAGATTTATTAAACTCTTTGAATCGTGTTGAGTAG

Protein sequence

MDNRECKFPFFDICYQLFHFIMKILSSKARETVTLGNPVSHDSNGSSQELRSVNSDHSISSLKNDVLDELELHSSKDDDSCVTPSHIEDKNDKNHHFVPLPSTIKHAPKKIVSIKETVEDIDSIMKERRKNKGAKKSKSFDFDHEYDGSLKPTRSILKVGSLNDKSDLLNSLNRVE
Homology
[Close]
BLAST of Cp4.1LG00g02130 vs. TrEMBL
Match: A0A0A0LYJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570780 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 9.5e-43
Identity = 113/185 (61.08%), Postives = 127/185 (68.65%), Query Frame = 1 

Query: 1   MDNRECKFPFFDICYQLFHFIMKILSSKARETVTLGNPVSHDSNGSSQEL-RSVNSDHSI 60
           MDNR+ KF FFDI YQ+FHFIM+ILSSKARE VTLGN V H+ N SS EL  S NS+HS 
Sbjct: 1   MDNRQSKFQFFDIFYQIFHFIMRILSSKAREIVTLGNSVPHEPNASSHELTTSSNSEHST 60

Query: 61  SSLKNDVLDELELH-------SSKDDDSCVTPSHIED--------KND-KNHHFVPLPST 120
           SSL ND L E            S   DS +T  H+++        +ND K+  FV LPST
Sbjct: 61  SSLTNDHLKETNKSQELATTLKSDHSDSPLTNDHLKEPKEIDLRKENDKKSDDFVSLPST 120

Query: 121 IKHAPKKIVSIKETVEDIDSIMKERRKNKGAKKSKSFDFDHEYDGSLKPTRSILKVGSLN 169
            K APKK+VSI E VEDIDSIMKERRK KG  KSKSFDFD+EYD SLKP RSILKVGS+ 
Sbjct: 121 TKRAPKKMVSINERVEDIDSIMKERRKKKGI-KSKSFDFDNEYDASLKPIRSILKVGSIK 180

[Close]
BLAST of Cp4.1LG00g02130 vs. TrEMBL
Match: K7N572_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G231300 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-07
Identity = 61/187 (32.62%), Postives = 89/187 (47.59%), Query Frame = 1 

Query: 1   MDNRECKFPFFDICYQLFHFIMKILSSKARETVTLGNPVSHDSNGSSQELRSVNSDHSIS 60
           MD RE       ICY+L+HF+ K L+S+A +TVTLG      S  S+      N+   + 
Sbjct: 1   MDKREFHLQPMGICYRLYHFLTKALASQALKTVTLGCSRRDSSRSSAVRSSDSNAKKEVQ 60

Query: 61  S-----------------LKNDVLDELELHSSKDDDSCVTPSHIEDKNDKNHHFVPLPST 120
           S                 +  D +  ++  + +    C+    +E +N      +P PS 
Sbjct: 61  SETQCKVDDGKKLPPTEGVPGDSISSVQQQAEEKSKPCMNVDKMEGENAA--LTLPTPSL 120

Query: 121 I-KHAPKKIVSIKETVEDIDSIMKERRK-NKGAKKSKSFDFDHEYDGSLKPTRSILKVGS 168
               + KK VSI E VE+I    K +RK ++  +KS S D + E    + P RSILKVGS
Sbjct: 121 APTRSIKKTVSISENVEEIPPPKKLKRKWSRSFQKSFSLDQEEE---PISPPRSILKVGS 180

[Close]
BLAST of Cp4.1LG00g02130 vs. TrEMBL
Match: A0A0B2QKD8_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_023760 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-07
Identity = 61/187 (32.62%), Postives = 89/187 (47.59%), Query Frame = 1 

Query: 1   MDNRECKFPFFDICYQLFHFIMKILSSKARETVTLGNPVSHDSNGSSQELRSVNSDHSIS 60
           MD RE       ICY+L+HF+ K L+S+A +TVTLG      S  S+      N+   + 
Sbjct: 1   MDKREFHLQPMGICYRLYHFLTKALASQALKTVTLGCSRRDSSRSSAVRSSDSNAKKEVQ 60

Query: 61  S-----------------LKNDVLDELELHSSKDDDSCVTPSHIEDKNDKNHHFVPLPST 120
           S                 +  D +  ++  + +    C+    +E +N      +P PS 
Sbjct: 61  SETQCKVDDGKKLPPTEGVPGDSISSVQQQAEEKSKPCMNVDKMEGENAA--LTLPTPSL 120

Query: 121 I-KHAPKKIVSIKETVEDIDSIMKERRK-NKGAKKSKSFDFDHEYDGSLKPTRSILKVGS 168
               + KK VSI E VE+I    K +RK ++  +KS S D + E    + P RSILKVGS
Sbjct: 121 APTRSIKKTVSISENVEEIPPPKKLKRKWSRSFQKSFSLDQEEE---PISPPRSILKVGS 180

[Close]
BLAST of Cp4.1LG00g02130 vs. TrEMBL
Match: A0A151TW58_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_010505 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-07
Identity = 62/169 (36.69%), Postives = 83/169 (49.11%), Query Frame = 1 

Query: 1   MDNRECKFPFFDICYQLFHFIMKILSSKARETVTLGNPVSHDSNGSSQELRSVNSDHSIS 60
           M+ RE      +ICY+L+HFIMK L+S+A +TVTLG    H S  SS E+     + S++
Sbjct: 1   MEQRELHL---NICYKLYHFIMKTLASQAMKTVTLGARSHHGS--SSTEVEITQREESVA 60

Query: 61  SLKNDVLDELELHSSKDDDSCVTPSHIEDKNDKNHHFVPLPSTIKHAPKKIVSIKETVED 120
               ++           D++ V                     +  APKKIVSI + VE+
Sbjct: 61  CRNINI-----------DENVVG------------------DLLPRAPKKIVSINDNVEE 120

Query: 121 IDSIMKERRKNKGAKKSKSFDFDHEYDGSLKPTRSILKVGS--LNDKSD 168
           I S         G K+SK F  D + D   KP RSILKVGS  LNDKS+
Sbjct: 121 IIS--------TGKKRSKLF-MDQQEDP--KPLRSILKVGSSNLNDKSN 124

[Close]
BLAST of Cp4.1LG00g02130 vs. TrEMBL
Match: A0A0B2P8L6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_022704 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.8e-07
Identity = 57/168 (33.93%), Postives = 88/168 (52.38%), Query Frame = 1 

Query: 1   MDNRECKFPFFDICYQLFHFIMKILSSKARETVTLGNPVSHDSNGSSQELRSVNSDHSIS 60
           MD RE       ICY+L++FIMK L+S+A +TVTLG    + S+ +  E+       +  
Sbjct: 1   MDQRELNL---GICYRLYNFIMKTLASQAMKTVTLGRSSHYSSSSTEVEITQRGFGTNTE 60

Query: 61  SLKNDVLDELELHSSKDDDSCVTPSHIEDKNDKNHHFVPLPSTIKHAPKKIVSIKETVED 120
            +   VL E                +I  +N+     V +   + HAPKK+VSI + VE+
Sbjct: 61  KM---VLAETPCEE----------KNIPCRNNNIDEKVLMVGDLPHAPKKMVSINDNVEE 120

Query: 121 IDSIMKERRKNKGAKKSKSFDFDHEYDGSLKPTRSILKVGS-LNDKSD 168
           I  I+  ++++K  ++S S D   E+    KP RSILKVG+ LN K++
Sbjct: 121 I--ILPSKKRSKTFQESNSLD-QQEHP---KPLRSILKVGAKLNYKTN 146

[Close]
BLAST of Cp4.1LG00g02130 vs. NCBI nr
Match: gi|700211008|gb|KGN66104.1| (hypothetical protein Csa_1G570780 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 1.4e-42
Identity = 113/185 (61.08%), Postives = 127/185 (68.65%), Query Frame = 1 

Query: 1   MDNRECKFPFFDICYQLFHFIMKILSSKARETVTLGNPVSHDSNGSSQEL-RSVNSDHSI 60
           MDNR+ KF FFDI YQ+FHFIM+ILSSKARE VTLGN V H+ N SS EL  S NS+HS 
Sbjct: 1   MDNRQSKFQFFDIFYQIFHFIMRILSSKAREIVTLGNSVPHEPNASSHELTTSSNSEHST 60

Query: 61  SSLKNDVLDELELH-------SSKDDDSCVTPSHIED--------KND-KNHHFVPLPST 120
           SSL ND L E            S   DS +T  H+++        +ND K+  FV LPST
Sbjct: 61  SSLTNDHLKETNKSQELATTLKSDHSDSPLTNDHLKEPKEIDLRKENDKKSDDFVSLPST 120

Query: 121 IKHAPKKIVSIKETVEDIDSIMKERRKNKGAKKSKSFDFDHEYDGSLKPTRSILKVGSLN 169
            K APKK+VSI E VEDIDSIMKERRK KG  KSKSFDFD+EYD SLKP RSILKVGS+ 
Sbjct: 121 TKRAPKKMVSINERVEDIDSIMKERRKKKGI-KSKSFDFDNEYDASLKPIRSILKVGSIK 180

[Close]
BLAST of Cp4.1LG00g02130 vs. NCBI nr
Match: gi|734373351|gb|KHN20197.1| (hypothetical protein glysoja_023760 [Glycine soja])

HSP 1 Score: 64.7 bits (156), Expect = 1.9e-07
Identity = 61/187 (32.62%), Postives = 89/187 (47.59%), Query Frame = 1 

Query: 1   MDNRECKFPFFDICYQLFHFIMKILSSKARETVTLGNPVSHDSNGSSQELRSVNSDHSIS 60
           MD RE       ICY+L+HF+ K L+S+A +TVTLG      S  S+      N+   + 
Sbjct: 1   MDKREFHLQPMGICYRLYHFLTKALASQALKTVTLGCSRRDSSRSSAVRSSDSNAKKEVQ 60

Query: 61  S-----------------LKNDVLDELELHSSKDDDSCVTPSHIEDKNDKNHHFVPLPST 120
           S                 +  D +  ++  + +    C+    +E +N      +P PS 
Sbjct: 61  SETQCKVDDGKKLPPTEGVPGDSISSVQQQAEEKSKPCMNVDKMEGENAA--LTLPTPSL 120

Query: 121 I-KHAPKKIVSIKETVEDIDSIMKERRK-NKGAKKSKSFDFDHEYDGSLKPTRSILKVGS 168
               + KK VSI E VE+I    K +RK ++  +KS S D + E    + P RSILKVGS
Sbjct: 121 APTRSIKKTVSISENVEEIPPPKKLKRKWSRSFQKSFSLDQEEE---PISPPRSILKVGS 180

[Close]
BLAST of Cp4.1LG00g02130 vs. NCBI nr
Match: gi|1012360072|gb|KYP71256.1| (hypothetical protein KK1_010505 [Cajanus cajan])

HSP 1 Score: 64.3 bits (155), Expect = 2.4e-07
Identity = 62/169 (36.69%), Postives = 83/169 (49.11%), Query Frame = 1 

Query: 1   MDNRECKFPFFDICYQLFHFIMKILSSKARETVTLGNPVSHDSNGSSQELRSVNSDHSIS 60
           M+ RE      +ICY+L+HFIMK L+S+A +TVTLG    H S  SS E+     + S++
Sbjct: 1   MEQRELHL---NICYKLYHFIMKTLASQAMKTVTLGARSHHGS--SSTEVEITQREESVA 60

Query: 61  SLKNDVLDELELHSSKDDDSCVTPSHIEDKNDKNHHFVPLPSTIKHAPKKIVSIKETVED 120
               ++           D++ V                     +  APKKIVSI + VE+
Sbjct: 61  CRNINI-----------DENVVG------------------DLLPRAPKKIVSINDNVEE 120

Query: 121 IDSIMKERRKNKGAKKSKSFDFDHEYDGSLKPTRSILKVGS--LNDKSD 168
           I S         G K+SK F  D + D   KP RSILKVGS  LNDKS+
Sbjct: 121 IIS--------TGKKRSKLF-MDQQEDP--KPLRSILKVGSSNLNDKSN 124

[Close]
BLAST of Cp4.1LG00g02130 vs. NCBI nr
Match: gi|571447025|ref|XP_006577258.1| (PREDICTED: uncharacterized protein LOC100777942 [Glycine max])

HSP 1 Score: 63.2 bits (152), Expect = 5.4e-07
Identity = 57/168 (33.93%), Postives = 88/168 (52.38%), Query Frame = 1 

Query: 1   MDNRECKFPFFDICYQLFHFIMKILSSKARETVTLGNPVSHDSNGSSQELRSVNSDHSIS 60
           MD RE       ICY+L++FIMK L+S+A +TVTLG    + S+ +  E+       +  
Sbjct: 1   MDQRELNL---GICYRLYNFIMKTLASQAMKTVTLGRSSHYSSSSTEVEITQRGFGTNTE 60

Query: 61  SLKNDVLDELELHSSKDDDSCVTPSHIEDKNDKNHHFVPLPSTIKHAPKKIVSIKETVED 120
            +   VL E                +I  +N+     V +   + HAPKK+VSI + VE+
Sbjct: 61  KM---VLAETPCEE----------KNIPCRNNNIDEKVLMVGDLPHAPKKMVSINDNVEE 120

Query: 121 IDSIMKERRKNKGAKKSKSFDFDHEYDGSLKPTRSILKVGS-LNDKSD 168
           I  I+  ++++K  ++S S D   E+    KP RSILKVG+ LN K++
Sbjct: 121 I--ILPSKKRSKTFQESNSLD-QQEHP---KPLRSILKVGAKLNYKTN 146

[Close]
BLAST of Cp4.1LG00g02130 vs. NCBI nr
Match: gi|828303433|ref|XP_012569853.1| (PREDICTED: uncharacterized protein LOC105851864 [Cicer arietinum])

HSP 1 Score: 62.8 bits (151), Expect = 7.0e-07
Identity = 53/166 (31.93%), Postives = 83/166 (50.00%), Query Frame = 1 

Query: 1   MDNRECKFPFFDICYQLFHFIMKILSSKARETVTLGNPVSHDSNGS----SQELRSVNSD 60
           MD RE       ICY+L+HFI K L+S+  +TVTLG    + S  +    S+      +D
Sbjct: 1   MDQREIHLQNMGICYKLYHFITKTLASQVLKTVTLGCSTHYSSTSTAPRGSETPYEDGND 60

Query: 61  HSISSLKNDVLDELELHSSKDDDSCVTPSHIEDKNDKNHHFVP-LPSTIKHAPKKIVSIK 120
              S  +  + D +   + +         +I++K  +N   +P  P   + + +K+VSI 
Sbjct: 61  KEFSHTQGLLCDSIYSPAQQAQHKDTPCKNIDEKVRENTTTLPTTPLPKRISLRKVVSIN 120

Query: 121 ETVEDIDSIMKERRKNKGAKKSKSFDFDHEYDGSLKPTRSILKVGS 162
           + VE+I    K +R+ K  +KS S D + E +    P RSILKVGS
Sbjct: 121 DNVEEILPGKKNKRRIKSFQKSSSLDQEEEPE----PLRSILKVGS 162

The following BLAST results are available for this feature:
BLAST of Cp4.1LG00g02130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG00g02130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYJ0_CUCSA9.5e-4361.08Uncharacterized protein OS=Cucumis sativus GN=Csa_1G570780 PE=4 SV=1[more]
K7N572_SOYBN1.3e-0732.62Uncharacterized protein OS=Glycine max GN=GLYMA_20G231300 PE=4 SV=1[more]
A0A0B2QKD8_GLYSO1.3e-0732.62Uncharacterized protein OS=Glycine soja GN=glysoja_023760 PE=4 SV=1[more]
A0A151TW58_CAJCA1.7e-0736.69Uncharacterized protein OS=Cajanus cajan GN=KK1_010505 PE=4 SV=1[more]
A0A0B2P8L6_GLYSO3.8e-0733.93Uncharacterized protein OS=Glycine soja GN=glysoja_022704 PE=4 SV=1[more]
BLAST of Cp4.1LG00g02130 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG00g02130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211008|gb|KGN66104.1|1.4e-4261.08hypothetical protein Csa_1G570780 [Cucumis sativus][more]
gi|734373351|gb|KHN20197.1|1.9e-0732.62hypothetical protein glysoja_023760 [Glycine soja][more]
gi|1012360072|gb|KYP71256.1|2.4e-0736.69hypothetical protein KK1_010505 [Cajanus cajan][more]
gi|571447025|ref|XP_006577258.1|5.4e-0733.93PREDICTED: uncharacterized protein LOC100777942 [Glycine max][more]
gi|828303433|ref|XP_012569853.1|7.0e-0731.93PREDICTED: uncharacterized protein LOC105851864 [Cicer arietinum][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g02130.1Cp4.1LG00g02130.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG00g02130Csa1G570780Cucumber (Chinese Long) v2cpecuB004
Cp4.1LG00g02130CSPI01G26860Wild cucumber (PI 183967)cpecpiB003
Cp4.1LG00g02130MELO3C015344.2Melon (DHL92) v3.6.1cpemedB009
Cp4.1LG00g02130CsaV3_1G039200Cucumber (Chinese Long) v3cpecucB0004
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG00g02130Cucurbita pepo (Zucchini)cpecpeB005