Cp4.1LG00g00280 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG00g00280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	HEAT repeat-containing 8
Location	Cp4.1LG00 : 501235 .. 503086 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGACTAAGGGTAATAACTTAGTCGTGAAGTTGTTATATTCCGGTCTCGAGTCTGTCTTCCCTTTCATAAGTCTCCATTGTCATCGCTTCACTTCAACAGTCATTAGGGTTTGAAAGGGAATACACACTTCAGTTCACGCTTTCGCCTCATCACTCTCCGTAATCATGCTAACCGGACTTGCCAGAGGCGCGTCTATGGTCGCAGCCGAAGTCGGAGTTCTCAGACGCCGTTTTCAAAGAACTCCGCCCCTTCAATCGCCGGAACACTGCTATGCATCCTCTGCTTCATTTTCTGCTCTCACTTCCTCCTCCTCGCCCCTCTCTCCCAACCCTATCGTCGCCGAGGACAACGACCTAGTCATGGAGGCCGGAGAGCCACTCCCTAGACTCGTATTCGGAGGCGCTCCTAGTTTTGAAGAAGCTAAGGAAGCCACCGCTGAGTTGAAGGAGGTCTTGGATGCGTAAGATCCGCCAAAACTCCATCTCATTCTATTGCCAATTTATTTGATTGCATACTTCATTTTCCGTTACACGATTTTTGTCATTTCCTCAACCCATCCTTATGCAAGAAAGTAACACAAAAACAAAAAGAAAAACAATAATTGTAAGATTTACNAATTTCCAGGATGTGTCTGTCGTCGCCTAAATACTTTGAATCAGATACCTCATTGATACCGGGAATTGCTCTGTCTCTGAACAATGAGACGGTGGATAACGGATTTGGTGTAATCATGGAGAACGATGCCAGGAATACAGGGCGTGAACATGTTCGCGAAGCATTCCGTTTGCTGCGCTGTAGCTCTAAAATCCAGGTAATTAATTTTAACGCATTAATTTTGATTAATTACCACGGCACTGAGGTTCAATGGATCTATTATCGTTCCATTTGTTCTCCAGAATATTGTTTCCGCCGTCGCCTGTGACCAAAATGTATTCAACGCTGTGCTTGAGAATTCTGATGTCAAGGAACTCATCCAGACATACAAAACGAGTAATCAAAATGTTCATTTCTTTTGAATCCAATTTAGTTTTTTGGGGCTGAAACTATGTTATTTCTGCTGCAAAACTTGATGAAGTTAAATTTCATTAAGGTTCTGGTACCGAGGATGAAGGAGATGTTACCCAAGAGGGGGAATCAGGAGCACGCGTGGTTAAAAAGCTGAGGAATATGAAAGATTTCGTAATTAAAATGGTGAGTAATATACCAAGTCATCTTCCAGGGTTCTTGCATGGATCTGCAGCTATGGAGAGTGCTGATGGATCAGATCATAAAGAAAGCATAACCATGAAGGCTCGCAAATTTGGTTCCGGCTGTGTGGAAAAGCTCAGAGACCTGAAAAATTCAGCTGTTGAAGTGGCTACTAAAATACCAAATTTTGTTCCAAACTGGTATGGATCTTCACCTGCAGGGAGTGGTTCTGAATCAGATCATAAAGGGAACGCCCAAAGTTCGACCCCTGAAATGAATTTGGGATTATCTATTACGGGGTTGGCAATCATAGTTATTATGATTGTAGTGTTCAAGCGAATTTAGACTCTGTGTCTCAACACATTGTGCTGGAGGCAGAGTTGGGCAGTAATGTAATTGATAGTATAAGGGAGGGAGGTACTTTATCTTAGCAAATCTGTTGAACTTTTTAAAGTGATTCTCTGTGTTTGTTTGCATAGAGAATATATGTATGTTACTATGAATAATGGGATTGCTGTTATGGAGTTTATGAAATCCATTCCTCTAGGAACAATTGCTTCTCTCACCTTTGCCCACCTTCCTACCATCGTCTGAAAGCTTCCTTAAAACACAAGCATTGTTGTCGTGGGGAGTGTTATAGCATAAGACTGGAGCCATATTGA

mRNA sequence

TAAGACTAAGGGTAATAACTTAGTCGTGAAGTTGTTATATTCCGGTCTCGAGTCTGTCTTCCCTTTCATAAGTCTCCATTGTCATCGCTTCACTTCAACAGTCATTAGGGTTTGAAAGGGAATACACACTTCAGTTCACGCTTTCGCCTCATCACTCTCCGTAATCATGCTAACCGGACTTGCCAGAGGCGCGTCTATGGTCGCAGCCGAAGTCGGAGTTCTCAGACGCCGTTTTCAAAGAACTCCGCCCCTTCAATCGCCGGAACACTGCTATGCATCCTCTGCTTCATTTTCTGCTCTCACTTCCTCCTCCTCGCCCCTCTCTCCCAACCCTATCGTCGCCGAGGACAACGACCTAGTCATGGAGGCCGGAGAGCCACTCCCTAGACTCGTATTCGGAGGCGCTCCTAGTTTTGAAGAAGCTAAGGAAGCCACCGCTGAGTTGAAGGAGGTCTTGGATGCGAATACAGGGCGTGAACATGTTCGCGAAGCATTCCGTTTGCTGCGCTGTAGCTCTAAAATCCAGAATATTGTTTCCGCCGTCGCCTGTGACCAAAATGTATTCAACGCTGTGCTTGAGAATTCTGATGTCAAGGAACTCATCCAGACATACAAAACGAGTTCTGGTACCGAGGATGAAGGAGATGTTACCCAAGAGGGGGAATCAGGAGCACGCGTGGTTAAAAAGCTGAGGAATATGAAAGATTTCGTAATTAAAATGGTGAGTAATATACCAAGTCATCTTCCAGGGTTCTTGCATGGATCTGCAGCTATGGAGAGTGCTGATGGATCAGATCATAAAGAAAGCATAACCATGAAGGCTCGCAAATTTGGTTCCGGCTGTGTGGAAAAGCTCAGAGACCTGAAAAATTCAGCTGTTGAAGTGGCTACTAAAATACCAAATTTTGTTCCAAACTGGTATGGATCTTCACCTGCAGGGAGTGGTTCTGAATCAGATCATAAAGGGAACGCCCAAAGTTCGACCCCTGAAATGAATTTGGGATTATCTATTACGGGGTTGGCAATCATAGTTATTATGATTGTAGTGTTCAAGCGAATTTAGACTCTGTGTCTCAACACATTGTGCTGGAGGCAGAGTTGGGCAGTAATGTAATTGATAGTATAAGGGAGGGAGGTACTTTATCTTAGCAAATCTGTTGAACTTTTTAAAGTGATTCTCTGTGTTTGTTTGCATAGAGAATATATGTATGTTACTATGAATAATGGGATTGCTGTTATGGAGTTTATGAAATCCATTCCTCTAGGAACAATTGCTTCTCTCACCTTTGCCCACCTTCCTACCATCGTCTGAAAGCTTCCTTAAAACACAAGCATTGTTGTCGTGGGGAGTGTTATAGCATAAGACTGGAGCCATATTGA

Coding sequence (CDS)

ATGCTAACCGGACTTGCCAGAGGCGCGTCTATGGTCGCAGCCGAAGTCGGAGTTCTCAGACGCCGTTTTCAAAGAACTCCGCCCCTTCAATCGCCGGAACACTGCTATGCATCCTCTGCTTCATTTTCTGCTCTCACTTCCTCCTCCTCGCCCCTCTCTCCCAACCCTATCGTCGCCGAGGACAACGACCTAGTCATGGAGGCCGGAGAGCCACTCCCTAGACTCGTATTCGGAGGCGCTCCTAGTTTTGAAGAAGCTAAGGAAGCCACCGCTGAGTTGAAGGAGGTCTTGGATGCGAATACAGGGCGTGAACATGTTCGCGAAGCATTCCGTTTGCTGCGCTGTAGCTCTAAAATCCAGAATATTGTTTCCGCCGTCGCCTGTGACCAAAATGTATTCAACGCTGTGCTTGAGAATTCTGATGTCAAGGAACTCATCCAGACATACAAAACGAGTTCTGGTACCGAGGATGAAGGAGATGTTACCCAAGAGGGGGAATCAGGAGCACGCGTGGTTAAAAAGCTGAGGAATATGAAAGATTTCGTAATTAAAATGGTGAGTAATATACCAAGTCATCTTCCAGGGTTCTTGCATGGATCTGCAGCTATGGAGAGTGCTGATGGATCAGATCATAAAGAAAGCATAACCATGAAGGCTCGCAAATTTGGTTCCGGCTGTGTGGAAAAGCTCAGAGACCTGAAAAATTCAGCTGTTGAAGTGGCTACTAAAATACCAAATTTTGTTCCAAACTGGTATGGATCTTCACCTGCAGGGAGTGGTTCTGAATCAGATCATAAAGGGAACGCCCAAAGTTCGACCCCTGAAATGAATTTGGGATTATCTATTACGGGGTTGGCAATCATAGTTATTATGATTGTAGTGTTCAAGCGAATTTAG

Protein sequence

MLTGLARGASMVAAEVGVLRRRFQRTPPLQSPEHCYASSASFSALTSSSSPLSPNPIVAEDNDLVMEAGEPLPRLVFGGAPSFEEAKEATAELKEVLDANTGREHVREAFRLLRCSSKIQNIVSAVACDQNVFNAVLENSDVKELIQTYKTSSGTEDEGDVTQEGESGARVVKKLRNMKDFVIKMVSNIPSHLPGFLHGSAAMESADGSDHKESITMKARKFGSGCVEKLRDLKNSAVEVATKIPNFVPNWYGSSPAGSGSESDHKGNAQSSTPEMNLGLSITGLAIIVIMIVVFKRI

Homology

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BLAST of Cp4.1LG00g00280 vs. TrEMBL
Match: A0A0A0L7S7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G094000 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.3e-64
Identity = 160/327 (48.93%), Postives = 207/327 (63.30%), Query Frame = 1


Query: 1   MLTGLARGASMVAAEVGVLRRRFQRTPPLQSPEHCYASSASFSALTSSSSPLSPNPIVAE 60
           M T   R  SM  A VGV+  R +++PP+QS E   ++S      T   S LS NP+  +
Sbjct: 1   MPTVATRFTSMATAGVGVVINRLRKSPPVQSLEQLLSNS------TRPVSALSLNPLFTD 60

Query: 61  DNDLVMEAGEPLPRLVFGGAPSFEEAKEATAELKEVLDA--------------------- 120
           + +LVMEAGEP+PRLVF    + EE+KE+TA+LKE LDA                     
Sbjct: 61  ETELVMEAGEPVPRLVFDRFINLEESKESTADLKEALDAMYLESEFPFSSEISLPLNSEI 120

Query: 121 ---NTGREHVREAFRLLRCSSKIQNIVSAVACDQNVFNAVLENSDVKELIQTYKTSSGT- 180
                G +HV +AF LL    ++QN+V++ A D  V  AV EN DVK+ IQ+++TSS T 
Sbjct: 121 VHNRPGVKHVHQAFHLLCNFPEVQNVVASAAADLKVQEAVFENPDVKKFIQSFQTSSDTD 180

Query: 181 --EDEGDVTQEGESGARVVKKLRNMKDFVIKMVSNIPSHLPGFLHGSAAMESADGSDHKE 240
             EDE +V+Q  ES A  +K  RN KDFV+KMV N+ SH P  L GS+ +E + GSD KE
Sbjct: 181 EDEDEENVSQVEESKASEIKMTRNPKDFVVKMVKNVLSHFP-HLFGSSVVEGSSGSDDKE 240

Query: 241 SITMKARKFGSGCVEKLRDLKNSAVEVATKIPNFVPNWYGSSPAGSG--SESDHKGNAQS 299
           + TMK  KFGSG V+KLR+LK+S VE+AT IPN++PN+YGSS + S   S SDHK N+QS
Sbjct: 241 NSTMKGGKFGSGFVQKLRNLKSSVVEMATNIPNYLPNFYGSSSSASESVSGSDHKENSQS 300

[Close]

BLAST of Cp4.1LG00g00280 vs. TrEMBL
Match: M0RVG5_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.3e-12
Identity = 60/187 (32.09%), Postives = 92/187 (49.20%), Query Frame = 1


Query: 60  EDNDLVMEAGEPLPRLVFGGAPSFEEAKEATAELKEVLD--------------------- 119
           E+ D+ +++  P PRLVFG   S EEAKEAT++LK+ LD                     
Sbjct: 84  EEKDVTLDSLHPAPRLVFGPVASLEEAKEATSDLKDALDMVYSTPDTNESTVQSPQESTH 143

Query: 120 ------ANTGREHVREAFRLLRCSSKIQNIVSAVACDQNVFNAVLENSDVKELIQTYKTS 179
                   +   HV +AF LLR S ++Q++V+++A D+NV+NAV++N  V E   T++ S
Sbjct: 144 SEASSIVPSAPRHVVQAFSLLRGSPEVQDVVASLASDENVWNAVMKNEKVMEFYVTHQ-S 203

Query: 180 SGTEDEGDVTQEGESGARVVKK-------LRNMKDFVIKMVSNIPSHLPGFLH--GSAAM 211
                E DV  + ES              + N+K  V+ MVSNI S     L   G ++ 
Sbjct: 204 IALNSESDVADDCESSTAETTPNSVFSDFVHNVKVKVVAMVSNITSFFQEILQTLGRSSS 263

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BLAST of Cp4.1LG00g00280 vs. TrEMBL
Match: A0A0V0I066_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.7e-10
Identity = 80/302 (26.49%), Postives = 126/302 (41.72%), Query Frame = 1


Query: 39  SASFSALTSSSSPLSPNPIVAEDND----------LVMEAGEPLPRLVFGGAPSFEEAKE 98
           SA  +A    SS +S  P +  D D          +++  GEPLPRLVFGGAPS +EA E
Sbjct: 57  SAMVTASHGGSSDVSYVPKMVSDFDDWEMAGGEEEMMVNPGEPLPRLVFGGAPSLQEATE 116

Query: 99  AT---------------------------------AELKEVLDANTGREHVREAFRLLRC 158
           AT                                   + E +   +  +H  +A+R+L  
Sbjct: 117 ATADLKDALVYLSGSANGYGGSCISGSSSSAVSKACVVSETIVTKSVPKHAVQAYRVLSE 176

Query: 159 SSKIQNIVSAVACDQNVFNAVLENSDVKELIQTYKTSSGTEDEGDVTQEGESGARVVKKL 218
               QN+V+++ACD NV+NAVL+N  +++ +++ ++S           E  +GA      
Sbjct: 177 IPAAQNVVASIACDPNVWNAVLQNPALQDFLESQRSS-----------EKFAGASFPDSD 236

Query: 219 RNMKDFVIKMVSNIPSHLPGFLHGSAAMESADGSDHKESITMKARKFGSGCVEKLRDLKN 278
           +   + V    S   S        S A ES  G+            F S      + +  
Sbjct: 237 QEKDESVADTASFSESSPWKPFSESKAEESKSGN-----------SFTSFLQNVTQTVTQ 296

Query: 279 SAVEVATKIPNFVPNWYGSSPAGSGSESDHKGNAQSSTPEMNLGLSITGLAIIVIMIVVF 298
           + V +   + +F  N +G    G+    D  G+A+    E  LG S   LA++V+M+VV 
Sbjct: 297 TVVSMMDSLSDFFNNLFG----GNQFFVDADGSAKFGAVEKTLGASFMALAVMVMMVVVS 332

[Close]

BLAST of Cp4.1LG00g00280 vs. TrEMBL
Match: M0T1W7_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.4e-09
Identity = 55/187 (29.41%), Postives = 94/187 (50.27%), Query Frame = 1


Query: 60  EDNDLVMEAGEPLPRLVFGGAPSFEEAKEATAELKEVLD-----ANTGREHVR------- 119
           E+ ++V+++  P PRLV G  PS EEAKEAT++LK+ L+      +T    ++       
Sbjct: 45  EEQEVVLDSLHPAPRLVCGPVPSLEEAKEATSDLKDALEKVNFSTSTNESAIKVPFESTC 104

Query: 120 ---------------EAFRLLRCSSKIQNIVSAVACDQNVFNAVLENSDVKELIQTY--- 179
                          +AF LL+ S + Q++V+++A D+NV++AV+ N  V E  +T+   
Sbjct: 105 YEASYVIPSMPRRVVQAFSLLQGSPEAQDVVASLASDKNVWDAVMRNEKVMEFFRTHQSI 164

Query: 180 ----KTSSGTE------DEGDVTQEGESGARVVKKLRNMKDFVIKMVSNIPSHLPGFLHG 207
               ++++ TE      +    T E  + +     +RN+K  + +MVSNI S L   L  
Sbjct: 165 VLHPESNAATEVPLADGNPRSSTAEATTNSAFAHFVRNIKVILAEMVSNISSFLQELLGT 224

[Close]

BLAST of Cp4.1LG00g00280 vs. TrEMBL
Match: A0A103YJM5_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_011253 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-09
Identity = 40/111 (36.04%), Postives = 63/111 (56.76%), Query Frame = 1


Query: 70  EPLPRLVFGGAPSFEEAKEATAELKEVLDA----------------------------NT 129
           +P+PRLVFGGAP+ +EAK+AT++L + LD                               
Sbjct: 77  DPMPRLVFGGAPTIQEAKQATSDLGDALDKTYLSSNDQNSSLLFDLEHVETKPCLVTDTC 136

Query: 130 GREHVREAFRLLRCSSKIQNIVSAVACDQNVFNAVLENSDVKELIQTYKTS 153
             +H  +AFRLL  +++ QN+V+++A D NV+ AVL+N  + + +QT+KTS
Sbjct: 137 ASKHAIQAFRLLHENTEAQNVVASIASDPNVWTAVLKNEALVDFLQTHKTS 187

[Close]

BLAST of Cp4.1LG00g00280 vs. TAIR10
Match: AT5G54540.1 (AT5G54540.1 Uncharacterised conserved protein (UCP012943))

HSP 1 Score: 49.7 bits (117), Expect = 3.7e-06
Identity = 32/120 (26.67%), Postives = 67/120 (55.83%), Query Frame = 1


Query: 108 EAFRLLRCSSKIQNIVSAVACDQNVFNAVLENSDVKELIQTYKTSSGTEDEGDVTQEGES 167
           +AF  L  ++  Q +V+++A D  V++AV+EN D+ + +QT KT+  ++ E D   + E 
Sbjct: 157 QAFAFLSENTAAQTVVASIASDPKVWDAVMENKDLMKFLQTNKTAVSSQVESDNDDQSER 216

Query: 168 GA------------RVVKKLRNMKDFVIKMVSNIPSHLPGFLHGSAAMESADGSDHKESI 216
            +             +++ L++MK   ++++ N+ S+  G L G  ++ + DG D K+++
Sbjct: 217 SSTTECEVVETKPMELLEILQDMKLKAVRLMENVSSYF-GDLFGLGSV-TEDGKDKKQTL 274

[Close]

BLAST of Cp4.1LG00g00280 vs. NCBI nr
Match: gi|659102832|ref|XP_008452336.1| (PREDICTED: uncharacterized protein LOC103493396 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 1.5e-73
Identity = 173/327 (52.91%), Postives = 219/327 (66.97%), Query Frame = 1


Query: 1   MLTGLARGASMVAAEVGVLRRRFQRTPPLQSPEHCYASSASFSALTSSSSPLSPNPIVAE 60
           M T   R  SM  A VGV+  RF++ PP+QS E    +S    ++ +SSS LS  P    
Sbjct: 1   MPTVATRFTSMATAGVGVITNRFRKPPPVQSSEQLLCNSTRPVSVLTSSSSLSLKPFFTY 60

Query: 61  DNDLVMEAGEPLPRLVFGGAPSFEEAKEATAELKEVLDA--------------------- 120
           + +LVMEAGEP+PRLVF   P+ EE+KEATA+LKEVLDA                     
Sbjct: 61  ETELVMEAGEPVPRLVFDRVPNLEESKEATADLKEVLDAMYLESEPPFSSEISLPLHSEI 120

Query: 121 ---NTGREHVREAFRLLRCSSKIQNIVSAVACDQNVFNAVLENSDVKELIQTYKTSSGTE 180
                G +HV +AFRLL  S +IQN V++ A DQ V+ AVLENS+VK+LIQ+Y+ SS T 
Sbjct: 121 VGDGPGVKHVHQAFRLLCNSPEIQNAVASAAADQKVYEAVLENSEVKKLIQSYQISSDTN 180

Query: 181 DEGD---VTQEGESGARVVKKLRNMKDFVIKMVSNIPSHLPGFLHGSAAMESADGSDHKE 240
           +E D   V QE ES A  +K  RN KDFV+KMV NI SHLPG L GS+ +E++ GSD KE
Sbjct: 181 EEKDEENVIQEEESKASEMKMSRNRKDFVVKMVKNILSHLPG-LFGSSVVENSSGSDSKE 240

Query: 241 SITMKARKFGSGCVEKLRDLKNSAVEVATKIPNFVPNWYGSSPAGSG--SESDHKGNAQS 299
           + TMK   FGSG VEKLR+LKNS VE+ TKIPN++PN++GSS + S   S SDHK N+QS
Sbjct: 241 NSTMKGGNFGSGFVEKLRNLKNSVVEMVTKIPNYLPNFHGSSSSASESVSGSDHKENSQS 300

[Close]

BLAST of Cp4.1LG00g00280 vs. NCBI nr
Match: gi|449464434|ref|XP_004149934.1| (PREDICTED: uncharacterized protein LOC101211780 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 6.2e-64
Identity = 160/327 (48.93%), Postives = 207/327 (63.30%), Query Frame = 1


Query: 1   MLTGLARGASMVAAEVGVLRRRFQRTPPLQSPEHCYASSASFSALTSSSSPLSPNPIVAE 60
           M T   R  SM  A VGV+  R +++PP+QS E   ++S      T   S LS NP+  +
Sbjct: 1   MPTVATRFTSMATAGVGVVINRLRKSPPVQSLEQLLSNS------TRPVSALSLNPLFTD 60

Query: 61  DNDLVMEAGEPLPRLVFGGAPSFEEAKEATAELKEVLDA--------------------- 120
           + +LVMEAGEP+PRLVF    + EE+KE+TA+LKE LDA                     
Sbjct: 61  ETELVMEAGEPVPRLVFDRFINLEESKESTADLKEALDAMYLESEFPFSSEISLPLNSEI 120

Query: 121 ---NTGREHVREAFRLLRCSSKIQNIVSAVACDQNVFNAVLENSDVKELIQTYKTSSGT- 180
                G +HV +AF LL    ++QN+V++ A D  V  AV EN DVK+ IQ+++TSS T 
Sbjct: 121 VHNRPGVKHVHQAFHLLCNFPEVQNVVASAAADLKVQEAVFENPDVKKFIQSFQTSSDTD 180

Query: 181 --EDEGDVTQEGESGARVVKKLRNMKDFVIKMVSNIPSHLPGFLHGSAAMESADGSDHKE 240
             EDE +V+Q  ES A  +K  RN KDFV+KMV N+ SH P  L GS+ +E + GSD KE
Sbjct: 181 EDEDEENVSQVEESKASEIKMTRNPKDFVVKMVKNVLSHFP-HLFGSSVVEGSSGSDDKE 240

Query: 241 SITMKARKFGSGCVEKLRDLKNSAVEVATKIPNFVPNWYGSSPAGSG--SESDHKGNAQS 299
           + TMK  KFGSG V+KLR+LK+S VE+AT IPN++PN+YGSS + S   S SDHK N+QS
Sbjct: 241 NSTMKGGKFGSGFVQKLRNLKSSVVEMATNIPNYLPNFYGSSSSASESVSGSDHKENSQS 300

[Close]

BLAST of Cp4.1LG00g00280 vs. NCBI nr
Match: gi|698553540|ref|XP_009769969.1| (PREDICTED: uncharacterized protein LOC104220737 isoform X2 [Nicotiana sylvestris])

HSP 1 Score: 88.6 bits (218), Expect = 2.0e-14
Identity = 72/272 (26.47%), Postives = 124/272 (45.59%), Query Frame = 1


Query: 61  DNDLVMEAGEPLPRLVFGGAPSFEEAKEATAELKEVLD---------------------- 120
           + D+++++GEPLPR+VFGGAPS +EA EAT++LK+ L+                      
Sbjct: 85  EEDMMVKSGEPLPRVVFGGAPSLQEATEATSDLKDALEKVYLSPPASYGGSCISGSSLLP 144

Query: 121 ------------ANTGREHVREAFRLLRCSSKIQNIVSAVACDQNVFNAVLENSDVKELI 180
                         +  +H  +AFR L  +   Q++V+++ACD NV+ AVL+N  ++E +
Sbjct: 145 FSKACVVSETVVTPSAPKHAIQAFRFLSETPAAQSVVASIACDPNVWTAVLQNPALQEFL 204

Query: 181 QTYKTSSGTEDEGDVTQEGESGARVVKKLRNMKDFVIKMVSNIPSHLPGFLHGSAAMESA 240
            + KTS+   D      E                     V++  S        + +   A
Sbjct: 205 VSQKTSASFPDSDQKMDES--------------------VADTDSFSQSSPRSAFSKSEA 264

Query: 241 DGSDHKESITMKARKFGSGCVEKL-RDLKNSAVEVATKIPNFVPNWYGSSPAGSGSESDH 298
           + S  K S T        G ++ + R +  + +++ + + ++  N +G    G+    + 
Sbjct: 265 EESKSKNSFT--------GFLQNVKRTVTQTVIDMMSSLSDYFNNLFG----GNKVFIEA 324

[Close]

BLAST of Cp4.1LG00g00280 vs. NCBI nr
Match: gi|698553536|ref|XP_009769968.1| (PREDICTED: uncharacterized protein LOC104220737 isoform X1 [Nicotiana sylvestris])

HSP 1 Score: 87.4 bits (215), Expect = 4.5e-14
Identity = 72/272 (26.47%), Postives = 126/272 (46.32%), Query Frame = 1


Query: 61  DNDLVMEAGEPLPRLVFGGAPSFEEAKEATAELKEVLD---------------------- 120
           + D+++++GEPLPR+VFGGAPS +EA EAT++LK+ L+                      
Sbjct: 85  EEDMMVKSGEPLPRVVFGGAPSLQEATEATSDLKDALEKVYLSPPASYGGSCISGSSLLP 144

Query: 121 ------------ANTGREHVREAFRLLRCSSKIQNIVSAVACDQNVFNAVLENSDVKELI 180
                         +  +H  +AFR L  +   Q++V+++ACD NV+ AVL+N  ++E +
Sbjct: 145 FSKACVVSETVVTPSAPKHAIQAFRFLSETPAAQSVVASIACDPNVWTAVLQNPALQEFL 204

Query: 181 QTYKTSSGTEDEGDVTQEGESGARVVKKLRNMKDFVIKMVSNIPSHLPGFLHGSAAMESA 240
            + KTS       D  Q+ +                 + V++  S        + +   A
Sbjct: 205 VSQKTSEKCASFPDSDQKMD-----------------ESVADTDSFSQSSPRSAFSKSEA 264

Query: 241 DGSDHKESITMKARKFGSGCVEKL-RDLKNSAVEVATKIPNFVPNWYGSSPAGSGSESDH 298
           + S  K S T        G ++ + R +  + +++ + + ++  N +G    G+    + 
Sbjct: 265 EESKSKNSFT--------GFLQNVKRTVTQTVIDMMSSLSDYFNNLFG----GNKVFIEA 324

[Close]

BLAST of Cp4.1LG00g00280 vs. NCBI nr
Match: gi|697123869|ref|XP_009615933.1| (PREDICTED: uncharacterized protein LOC104108568 isoform X1 [Nicotiana tomentosiformis])

HSP 1 Score: 83.6 bits (205), Expect = 6.5e-13
Identity = 72/297 (24.24%), Postives = 132/297 (44.44%), Query Frame = 1


Query: 36  YASSASFSALTSSSSPLSPNPIVAEDNDLVMEAGEPLPRLVFGGAPSFEEAKEATAELKE 95
           +  S   S++    S      +   + D+++++GEPLPR+VFGGAPS +EA EAT++LK+
Sbjct: 61  HGGSVDVSSVQKILSEFDDWEMAGGEEDMIVKSGEPLPRVVFGGAPSLQEATEATSDLKD 120

Query: 96  VLD-----------------------------------ANTGREHVREAFRLLRCSSKIQ 155
            L+                                     +  +H  +AFR L  +   Q
Sbjct: 121 ALEKVYLSQPASDYGGSCISGSSLLPFSKACVVSKTVVTPSAPKHAIQAFRFLSETPAAQ 180

Query: 156 NIVSAVACDQNVFNAVLENSDVKELIQTYKTSSGTEDEGDVTQEGESGARVVKKLRNMKD 215
           ++V+++ACD NV+ AVL+N  ++E +++ KTS       D+ Q+ +              
Sbjct: 181 SVVASIACDPNVWTAVLQNPALQEFLESQKTSEKCASFPDLDQKMD-------------- 240

Query: 216 FVIKMVSNIPSHLPGFLHGSAAMESADGSDHKESITMKARKFGSGCVEKLRDLKNSAVEV 275
              + V++  S        + +   A+ S  K S T             L+++ ++  + 
Sbjct: 241 ---ESVADTDSFSQSSPRNAFSKYEAEESKSKNSFT-----------GFLQNVTHTVTQT 300

Query: 276 ATKIPNFVPNWYGSSPAGSGSESDHKGNAQSSTPEMNLGLSITGLAIIVIMIVVFKR 298
              + + + +++ +   G+    +  G+A+    E  LG S  GLAI+ IM+VV KR
Sbjct: 301 VINMMSSLSDYFNNLFGGTKVFIEADGSAKLGAVEKTLGASFIGLAIMAIMVVVLKR 329

The following BLAST results are available for this feature:

BLAST of Cp4.1LG00g00280 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG00g00280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7S7_CUCSA	4.3e-64	48.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G094000 PE=4 SV=1	[more]
M0RVG5_MUSAM	2.3e-12	32.09	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
A0A0V0I066_SOLCH	4.7e-10	26.49	Putative ovule protein OS=Solanum chacoense PE=4 SV=1	[more]
M0T1W7_MUSAM	1.4e-09	29.41	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
A0A103YJM5_CYNCS	1.8e-09	36.04	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_011253 PE=4 ...	[more]

BLAST of Cp4.1LG00g00280 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54540.1	3.7e-06	26.67	Uncharacterised conserved protein (UCP012943)	[more]

BLAST of Cp4.1LG00g00280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102832\|ref\|XP_008452336.1\|	1.5e-73	52.91	PREDICTED: uncharacterized protein LOC103493396 [Cucumis melo]	[more]
gi\|449464434\|ref\|XP_004149934.1\|	6.2e-64	48.93	PREDICTED: uncharacterized protein LOC101211780 [Cucumis sativus]	[more]
gi\|698553540\|ref\|XP_009769969.1\|	2.0e-14	26.47	PREDICTED: uncharacterized protein LOC104220737 isoform X2 [Nicotiana sylvestris...	[more]
gi\|698553536\|ref\|XP_009769968.1\|	4.5e-14	26.47	PREDICTED: uncharacterized protein LOC104220737 isoform X1 [Nicotiana sylvestris...	[more]
gi\|697123869\|ref\|XP_009615933.1\|	6.5e-13	24.24	PREDICTED: uncharacterized protein LOC104108568 isoform X1 [Nicotiana tomentosif...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG00g00280.1	Cp4.1LG00g00280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33625	FAMILY NOT NAMED	coord: 60..164 score: 8.5E-28coord: 203..298 score: 8.5
None	No IPR available	PANTHER	PTHR33625:SF4	SUBFAMILY NOT NAMED	coord: 203..298 score: 8.5E-28coord: 60..164 score: 8.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG00g00280	CmaCh16G008340	Cucurbita maxima (Rimu)	cmacpeB337
Cp4.1LG00g00280	CmoCh16G009280	Cucurbita moschata (Rifu)	cmocpeB301
Cp4.1LG00g00280	Cla003834	Watermelon (97103) v1	cpewmB002
Cp4.1LG00g00280	Csa3G094000	Cucumber (Chinese Long) v2	cpecuB009
Cp4.1LG00g00280	MELO3C016604	Melon (DHL92) v3.5.1	cpemeB014
Cp4.1LG00g00280	ClCG10G006140	Watermelon (Charleston Gray)	cpewcgB001
Cp4.1LG00g00280	CSPI03G05590	Wild cucumber (PI 183967)	cpecpiB007
Cp4.1LG00g00280	Lsi05G006500	Bottle gourd (USVL1VR-Ls)	cpelsiB014
Cp4.1LG00g00280	MELO3C016604.2	Melon (DHL92) v3.6.1	cpemedB015
Cp4.1LG00g00280	CsaV3_3G005690	Cucumber (Chinese Long) v3	cpecucB0011
Cp4.1LG00g00280	Bhi11G000551	Wax gourd	cpewgoB0000
Cp4.1LG00g00280	CsGy3G005720	Cucumber (Gy14) v2	cgybcpeB280
Cp4.1LG00g00280	Carg24837	Silver-seed gourd	carcpeB1109

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None