CmoCh20G008760 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCACCAGAAGCCACTTATTTGGCGGATTCTGATTCCAAGTCTTGTGCTTTTCCAAACCCCACTTCCCATGTTTGCCTTCCCTTTCTTCCCCTCAAAACCCTAGGCGGAGCCGGAGAAATCCCCGCCCATGGAAGAAGACAGTATAGATATGGTTCTGGCCAGAGCCACCGACCTCCGATTGAAGATCAGCAACTGCATTCACAATGCAACAACCACTGCTAGAACGGGAAATGAAGCCGCTGACGACGGCGGTTCCGGTTCCGAAACTGCGGTCGGAGATACGGAGGACGATGAAGAAGTAGAACGACTTTTGAGTGTCTGCGATGCTCTCGAGTCCTTGGAGACTCAGCTCTCCTCGTTGCAGGTTTTCTCTTAATTGGAACCTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTCTGTTCTTTCATGTTTCTTGATTTGTTGGTCTGTGATTTTGTGCTGCTTTTGATTTTGAATTGCTTTTATTGTATCATATGATGATTGTTCTGATCTAGGTTTCGTTTTTCTGTTCTTCATTTTCTCATATTCTTGAGCCAAGAGATTGTTTGTCTACTTTTGCTGAATTTAGAACGATCTTCCTTTTCATTGAGCTTTGAAACTACTTATTGAATTGCTTTGTTCTGCCAAATGAGACCTTGTTCCTTGCTTTGTTATTGTTCAAACATGCTTTGCTTGCATTTTCTTAATGTTTTTCCTGTTATATGAATTGTATTGAACTATTTTGGCCTTTGGAATTGTAAAGCTAAGCATATTCTCTGTCTTTGTCTGTCTTTTCCTTGTTACTCTGTACAAAACCATTATGATTATGGACTGCTCTGAACTTTTATCTTTAATCCCATGGTTAGAGTCATTGTGCTTTGAATTGAACTTCAACTCATGCTATAGGATTAGCTTTGAAATATTTGGTGGCTGTATGTGTGGCCATTTAGCTTGTCTCTTGGGGAAAAGAAGCTTAGAGGTCATATGGCAACTTTTTGTAACAAGTCGAAGCCCGCCGTTAGCAAATATTGTCTTATATCGAACCTAGCATGTCTCGAGCTTCACCTTCAGGTCTTTTAAAACGCCTCTATTAAGAGAGGTTTCCACACCCTTCTCAGGAATGTTTCGTTCCCTTCTCCAACTAATGTGAGATCTCACAATTCACCCTCCTTAGGGGCTTCGGGCTTCCCTCAAGGTTTTTTAAAACATGTCTACTAAGTAGCGGTTTCTACACCCTTGTAATGAATGCTTCGTTCTCCTCTCCAACCGATGTGAGATCTCACAATTCACCCCCTTTAGGGTCTCGAGCTTCCTTTCAAGGTTTTTAAAACACCTCTACTAAGAAGAGGTTTCCACACCCCCTTCAACCAACGTGGGATCTCACAATCCACCCTCCCTTAAGGGCCTCGGGCTTCACCACAAGGTTTTTAAAACGCGTCTACTAGGGAGTGGTTTCCACATGCTTACGAGGAATCTCAAACCGACGTGGGATTTCCCACTTTTTCATTTTTTGTTTTTTAGTTTTATAAACATATTTTTATGGTAATTATTCCTTGTTTGTCAGTTCTCAATGTTTCTAAAACTTGGATGGCAATCTTGAAATTCGAAGCAATTATCAAGAGAAAACATTAAACTATGAGAATGTCACGAAATTTTGCCTAATTTGATTATCATTGACCACCACTGATGTAAACCTTGTTTTGTTGATATAATCAATGGAAGTTTTTTATTATATAGATAGGTTGTTGCTAGAAGCACCAGTCTTTTCTTGTTTGCTTTGTTCTCACATATGCGTCAGAAACCCGAGCAGATATAATTGTACTAAATTCAGGTTATGTCAGAATAATCCTTAGGTTTATGTTCTGTTTCGTTACTGGTTATAAAACTCCGGGACGATGTAATGTTCGTTGAATATATTTGCATAACTAGCTATATAATTATATGTAACAGCCCAAACCCACGGCTCCTCAAGGTTTTGAAACGCGTCTGGTAGGGAGAGCTTTCCTCGGCCTTATAAAGAATGCATCGTTCCCCTCTCCAACCGATATGGGATCTCACAAGTGCCTCTAGGTGTGTCAGCGAGGACGCTGGCCCCTAAGGAGGGAGGATTGTGAGATCCCACACCGATTGGAGAGGGGAATGATGCATTTCTTATAAGACTGTGGAAACCTCTCTCTACCAGACGCGTTTTAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATACTTGCTAGCGTTAGATTTTGGCTGTACATTATACGATGTAACACTTCCAGCTAAAATTAATGTTGTTTCACTTGTCATTTTAAGGATTTACAACAACAACAGCGATACGAACGGGAAGCTGCCCTCAGCGAGATCGAACACAACCGCAAGATGCTACTCGACAAGCTCAAGGAGTACAAAGGGGAGCATTTGGAAGTCATAAATGAAGCTTCTGCCTTTGCTGGGGAGGCAGTAAAGAACAACCATGACTTCATGCTTCCTCCATACCCAAGCCGTCTTCCATTCCCTCTCCACCTAAACAATGGCCATTTATTACCATCCTTGTCTGCTCGCAAAGCTGCCCATAATGGGGTATCCTTAAGCTACATGAAAAACGACACGGAAAGGGAGTCAAGCGAGTCGTTGACGACCAACAAACAAGCAAGCACGAGAAACTCAAGGAGGAACGGGTTCGGTTCACTCGTAGCTGCAGCAGCCAAGGCAGTGTTCACCATTGTTGGTGTTGTGACCATAATGAGCATATCTGGTTTCGGGCCACGAATCGTAGTAAAAAGAGCTTCTACTCATTTGATGAAATCCAGTGCGATCGAACAGCCATCGACAGAAGACGAGAGACCGAGAACTCGGTGCCCGCTGGGGAAAATCCTGGTTGTGGAAGACGGGGAGGAGAGGTGTTTGGTGAAAGAGAGAATTGAAGTTCCATTTTCTTCTGCTGTGGTAAAACCAGATGTGAACTATGGATGTGGTTAATTTTCGATAAGGTAGAATAATAATCCTTTTATGATAGGGGCTGGTTTGGAATTTAATAGAAGTTGGAGGGCTGTAAATTAAATTCCCAATAAAAGATTGAGATGTAAAGTTGATAAAAATTGACTGAAATTGAAAATTTAAAAAGCCTAGGGACTGAAGTGAAAAAATGGTGAAAGAATCAGAGAGAA GCCACCAGAAGCCACTTATTTGGCGGATTCTGATTCCAAGTCTTGTGCTTTTCCAAACCCCACTTCCCATGTTTGCCTTCCCTTTCTTCCCCTCAAAACCCTAGGCGGAGCCGGAGAAATCCCCGCCCATGGAAGAAGACAGTATAGATATGGTTCTGGCCAGAGCCACCGACCTCCGATTGAAGATCAGCAACTGCATTCACAATGCAACAACCACTGCTAGAACGGGAAATGAAGCCGCTGACGACGGCGGTTCCGGTTCCGAAACTGCGGTCGGAGATACGGAGGACGATGAAGAAGTAGAACGACTTTTGAGTGTCTGCGATGCTCTCGAGTCCTTGGAGACTCAGCTCTCCTCGTTGCAGGATTTACAACAACAACAGCGATACGAACGGGAAGCTGCCCTCAGCGAGATCGAACACAACCGCAAGATGCTACTCGACAAGCTCAAGGAGTACAAAGGGGAGCATTTGGAAGTCATAAATGAAGCTTCTGCCTTTGCTGGGGAGGCAGTAAAGAACAACCATGACTTCATGCTTCCTCCATACCCAAGCCGTCTTCCATTCCCTCTCCACCTAAACAATGGCCATTTATTACCATCCTTGTCTGCTCGCAAAGCTGCCCATAATGGGGTATCCTTAAGCTACATGAAAAACGACACGGAAAGGGAGTCAAGCGAGTCGTTGACGACCAACAAACAAGCAAGCACGAGAAACTCAAGGAGGAACGGGTTCGGTTCACTCGTAGCTGCAGCAGCCAAGGCAGTGTTCACCATTGTTGGTGTTGTGACCATAATGAGCATATCTGGTTTCGGGCCACGAATCGTAGTAAAAAGAGCTTCTACTCATTTGATGAAATCCAGTGCGATCGAACAGCCATCGACAGAAGACGAGAGACCGAGAACTCGGTGCCCGCTGGGGAAAATCCTGGTTGTGGAAGACGGGGAGGAGAGGTGTTTGGTGAAAGAGAGAATTGAAGTTCCATTTTCTTCTGCTGTGGTAAAACCAGATGTGAACTATGGATGTGGTTAATTTTCGATAAGGTAGAATAATAATCCTTTTATGATAGGGGCTGGTTTGGAATTTAATAGAAGTTGGAGGGCTGTAAATTAAATTCCCAATAAAAGATTGAGATGTAAAGTTGATAAAAATTGACTGAAATTGAAAATTTAAAAAGCCTAGGGACTGAAGTGAAAAAATGGTGAAAGAATCAGAGAGAA ATGGAAGAAGACAGTATAGATATGGTTCTGGCCAGAGCCACCGACCTCCGATTGAAGATCAGCAACTGCATTCACAATGCAACAACCACTGCTAGAACGGGAAATGAAGCCGCTGACGACGGCGGTTCCGGTTCCGAAACTGCGGTCGGAGATACGGAGGACGATGAAGAAGTAGAACGACTTTTGAGTGTCTGCGATGCTCTCGAGTCCTTGGAGACTCAGCTCTCCTCGTTGCAGGATTTACAACAACAACAGCGATACGAACGGGAAGCTGCCCTCAGCGAGATCGAACACAACCGCAAGATGCTACTCGACAAGCTCAAGGAGTACAAAGGGGAGCATTTGGAAGTCATAAATGAAGCTTCTGCCTTTGCTGGGGAGGCAGTAAAGAACAACCATGACTTCATGCTTCCTCCATACCCAAGCCGTCTTCCATTCCCTCTCCACCTAAACAATGGCCATTTATTACCATCCTTGTCTGCTCGCAAAGCTGCCCATAATGGGGTATCCTTAAGCTACATGAAAAACGACACGGAAAGGGAGTCAAGCGAGTCGTTGACGACCAACAAACAAGCAAGCACGAGAAACTCAAGGAGGAACGGGTTCGGTTCACTCGTAGCTGCAGCAGCCAAGGCAGTGTTCACCATTGTTGGTGTTGTGACCATAATGAGCATATCTGGTTTCGGGCCACGAATCGTAGTAAAAAGAGCTTCTACTCATTTGATGAAATCCAGTGCGATCGAACAGCCATCGACAGAAGACGAGAGACCGAGAACTCGGTGCCCGCTGGGGAAAATCCTGGTTGTGGAAGACGGGGAGGAGAGGTGTTTGGTGAAAGAGAGAATTGAAGTTCCATTTTCTTCTGCTGTGGTAAAACCAGATGTGAACTATGGATGTGGTTAA
BLAST of CmoCh20G008760 vs. Swiss-Prot
Match: PDV2_ARATH (Plastid division protein PDV2 OS=Arabidopsis thaliana GN=PDV2 PE=1 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 7.4e-57 Identity = 135/315 (42.86%), Postives = 194/315 (61.59%), Query Frame = 1
BLAST of CmoCh20G008760 vs. TrEMBL
Match: A0A0A0LP41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G238870 PE=4 SV=1) HSP 1 Score: 411.0 bits (1055), Expect = 1.3e-111 Identity = 226/308 (73.38%), Postives = 255/308 (82.79%), Query Frame = 1
BLAST of CmoCh20G008760 vs. TrEMBL
Match: A0A067LG18_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10048 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.4e-69 Identity = 164/328 (50.00%), Postives = 213/328 (64.94%), Query Frame = 1
BLAST of CmoCh20G008760 vs. TrEMBL
Match: A0A0B2PEZ8_GLYSO (Plastid division protein PDV2 OS=Glycine soja GN=glysoja_031594 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.7e-68 Identity = 152/303 (50.17%), Postives = 201/303 (66.34%), Query Frame = 1
BLAST of CmoCh20G008760 vs. TrEMBL
Match: I1LJI0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G121600 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.7e-68 Identity = 152/303 (50.17%), Postives = 201/303 (66.34%), Query Frame = 1
BLAST of CmoCh20G008760 vs. TrEMBL
Match: C6TIK7_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 6.5e-68 Identity = 151/303 (49.83%), Postives = 200/303 (66.01%), Query Frame = 1
BLAST of CmoCh20G008760 vs. TAIR10
Match: AT2G16070.2 (AT2G16070.2 plastid division2) HSP 1 Score: 222.2 bits (565), Expect = 4.2e-58 Identity = 135/315 (42.86%), Postives = 194/315 (61.59%), Query Frame = 1
BLAST of CmoCh20G008760 vs. TAIR10
Match: AT5G53280.1 (AT5G53280.1 plastid division1) HSP 1 Score: 52.0 bits (123), Expect = 7.5e-07 Identity = 46/153 (30.07%), Postives = 74/153 (48.37%), Query Frame = 1
BLAST of CmoCh20G008760 vs. NCBI nr
Match: gi|659118748|ref|XP_008459284.1| (PREDICTED: plastid division protein PDV2 [Cucumis melo]) HSP 1 Score: 425.2 bits (1092), Expect = 9.2e-116 Identity = 232/308 (75.32%), Postives = 265/308 (86.04%), Query Frame = 1
BLAST of CmoCh20G008760 vs. NCBI nr
Match: gi|700206652|gb|KGN61771.1| (hypothetical protein Csa_2G238870 [Cucumis sativus]) HSP 1 Score: 411.0 bits (1055), Expect = 1.8e-111 Identity = 226/308 (73.38%), Postives = 255/308 (82.79%), Query Frame = 1
BLAST of CmoCh20G008760 vs. NCBI nr
Match: gi|449455316|ref|XP_004145399.1| (PREDICTED: plastid division protein PDV2 [Cucumis sativus]) HSP 1 Score: 408.7 bits (1049), Expect = 8.9e-111 Identity = 225/307 (73.29%), Postives = 254/307 (82.74%), Query Frame = 1
BLAST of CmoCh20G008760 vs. NCBI nr
Match: gi|1009165015|ref|XP_015900812.1| (PREDICTED: plastid division protein PDV2-like [Ziziphus jujuba]) HSP 1 Score: 294.7 bits (753), Expect = 1.9e-76 Identity = 173/306 (56.54%), Postives = 215/306 (70.26%), Query Frame = 1
BLAST of CmoCh20G008760 vs. NCBI nr
Match: gi|645262389|ref|XP_008236742.1| (PREDICTED: plastid division protein PDV2 [Prunus mume]) HSP 1 Score: 284.6 bits (727), Expect = 1.9e-73 Identity = 166/308 (53.90%), Postives = 217/308 (70.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|