CmoCh02G004200 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAGACGGCATAGACATGGTTCTTGGCAGAGCCACAGAGCTCCGGTTGAAGATCAGCAACTGCATTCACAAGGCTACAACCATCGCCTCTCTCCTGCAAGACCCATCTGCCGGAGGGGGAAATGAGGCTGCCAATGACGGTGGTTCCACCTCCGAATGTCCTGCCGCCGTCACGGAGGACGACGAAGAAGTGGAACGGCTTTTGAATATCTGCGATGCCCTTGAATCCTTGGAGACCCAACTCTCTTCTTTGCAGGTTTTCCCGCGTTCGCTCTTTTTTTTTTCTCACATTTCTTGATTTGATGGTCTGTGACTCTGTTCTGCTTTTGATTTTGAATTGATTTGATTGTATCATATGGCAATTGTTCTGATCTGGGTTTTGTTGTTCTTTTGTTCATTTCCCCATATTTTGGAGCTAAGAAGTTCTTGAATGATCTTCGTTGTTCTTGTGGTAGAAAGAAAGTGAATTGAAACTTTGAAACTACTTATTGAATTGCTTTGTTGTTTGTGTTCTGTCAAATCAGACCTTGTTCCTTGCTTTGGTATATTGTTTGTGAATGCAGAAGAAACTGATATCATAAGAAATGGTTTTCAAACATGATTTCTTGCTTTTTCTGAAAGGTTTTCCTCTTCTAGCAAACAAGTTTGGCCTTTGGGATTGTAATGCTAAATCATATTCTCGCTCTCTGTATCCTTCTCTTTATCTGTCTTGTCTCTCTTGTCACTTTGGTCAGGGACTACGAGAGATCTCACATCGGTTGAGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACGTTTTTTAAAAATCTTGAGGGGAAACCCGAAAAGGAAAGTCCAAAGAGGACAATATCTGCTAGAGGTGGGCTTGGGGCGTTACAAATGGTATTAGAGCTAGACACCAGGTGATGTGAGTGAGGAGGTTGAGCCCCGAAAGGGGTGGACACGAGGCGGTGTGCTAGCAAGGACACTGGGCCTTGAAGGGGGTGGATTGGTGAGGGTCCCACATTGATTGGAGAAAGGAACGAGTACTAGCGAGGATGTTGGCCCCAAAGAGGGGTGAGTTGTGAGGTTTCACCTTGGTTGGGGAGGAGAATGAAGCATTCTTTATAAGGGTGTGGAAACCTCTGCCTAGTAGATGCGTTTTGAAAACCTTGGGGGAAAGCCCAAAGAGGACAACATCTGCTAGCGGTGGGCTTAGGCCGTTACAAATGGTATTAGAGCTAGACATCGAGCGATGTGCCTGTGAGGAGGTTGAGCCCTGAAGGGGGTGGACATGAGACAGTGTGCCAGTAAGGACGCTGGGCTCCGAAGGAGGTGGATTTGGGGAGGGGGTCCCACATCGATTGGAGAAAGGAAGGAGTGCTAGCGAGAACGTTGGCTCCAAAAGAGGTGGATTGTGAGATTCCACGTCGGTTGGGGAGGAGAACGAAGCATTCTTTATAATGGTGTGGAAACCTTTCCCTAACAAACGTATTTTAAAAACCTTGAGGGGAACTCCAAAAGGGAAAGCTCAGAAGGACAAGATCTACTAGCGGTAGGTTTGGGCCGTTACAGACTATGGATGGCTCCAGAGCAGTCCATAGTCATAGCACCAATCTATTCTTGCTTTCTTGATCTCACAGATGTGCGGGTAACCCGAGCAGATATCTCAGTTCGAAATTTGAGTTATATCAGAATAATCCATAGATTTTTGTTCTGTTTCATTACTAGAACGTTAATTGAACTCTGGGATAATGTAGTCTTTGTTGAATATATTTGCATTCCTAGTTATGTAACTATATGATCCAGACAATTGGTCCAGTGCTAATTGATATTGCTACTCTTGTCATATCAAGGTATTGCAACAACAACAACGATACGAACGGGAAGCTGCTCTGAGTGAGATCGAACACAGCCGCACGATGCTACTCGACAAGCTCAAGAACTACAAAGGTGAGCATTTGGAGGTGATAAACGAAGCTTCGGCCTTTGCTGGCGAGGCAGTAGAGCACAACCATGATCTCATGCTTCCTCCATATCCAACCCGTCCGCCCTACGCTCTTCACCTAAACAATGGCCAATTACCACCATCCTTGTCCGCTCGCAAATCTGCCCGCAATGGGGTAACCTTGAACTACACGACGAACGATGCTAAAAGGGAGTCAAGCGAGTCGTTGACTACCAGCAAACAAGCGAGCACGAGAAGCTCGACGAACGGATTAGGTTCACTCATAGCTGCTGCAGCCAAGGCAGTGTTTACCATTGTTGGTGTTGTGTCAATATTGAGCATGTCTGGCTTTGGACAACGAATCGCAGCGAAGAGAGTTAGTCGTTCGAAGATCTCCAATGGGTTTGTTGAACAGCCATCGACCAAAGAAGAGAGACCGATAATTCGATGCCCGCCTGGGAAAATTCTCACGGTGGAAGACGGGGAGGCGCGGTGCGTGGTGAAAGAGAGAGTCGAAGTTCCATTTTCCTCCGCCGTGGCCAAACCAGATGTGAACTATGGATGTGGTTAATGCATCACTTGCCAATGCTTCTTTCTTCCACATCCAAAGGTAACACTTCATTCCATCTTCAATATGTAAAGTTTAACACATTTTTATGTTCTAAAAATATATATAAGTATATATTAGGTTTTAATTTTTTTTAGTTTAATGCATCCCATCTTAAAATCTACATTTTGGTCTAATTTGAACGACAATTTTCAAAGAGGATAATATCTGCTAGCGGTGGATCTGGGTTGTTACAAATGGTATCAGAGCCAGACACCGGACGATGTGCCAGCCTTCTCGCTGTTCCCCAAAGGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACGTTGGCCCCAAAGGGGGGTGAATTTTGGGGTGGTCCTACATTGATTGGAGGAAGGAAAGAGTGTCAGCGAGGACGCTAGGCCCTGAAGAGGAGTGGATTGTGATGTCCCACATTGGTTGGGAAGAAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCTTAGCATACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAAGGAAAGCCCAAAGCGGACAATATCTGTTAGCGGTGGATTTGGGTTGTTACATTATGAGTCGCGTTCTTTCTTCTCCGTACCTCAATATGAGTTCATTCTTGGAGAGGTCCAATAAGATCTGTTCCTATTATGCAAATGGTTGAAGACTCGTAACTTTGACTCATAACTTTGGTCGGAGGCTATGCTAGTTACCTTGGTGTTACGATAAATTGATGGCATCAATCACATAACCTATTAACCTAGTGAACTTTTGCATATTCTTGACCATGGTTGATTAGTAGTAATTTGACTCGTTAATTTGTTTATTAGAGATTTGTCTCTTGAGTGGTTACCATATACTCTCTTGTAGATTTCTCGGATGATGTAGTTAGCCTCATTGAGAGTAAGGAGTAA ATGGAAGAAGACGGCATAGACATGGTTCTTGGCAGAGCCACAGAGCTCCGGTTGAAGATCAGCAACTGCATTCACAAGGCTACAACCATCGCCTCTCTCCTGCAAGACCCATCTGCCGGAGGGGGAAATGAGGCTGCCAATGACGGTGGTTCCACCTCCGAATGTCCTGCCGCCGTCACGGAGGACGACGAAGAAGTGGAACGGCTTTTGAATATCTGCGATGCCCTTGAATCCTTGGAGACCCAACTCTCTTCTTTGCAGGTATTGCAACAACAACAACGATACGAACGGGAAGCTGCTCTGAGTGAGATCGAACACAGCCGCACGATGCTACTCGACAAGCTCAAGAACTACAAAGGTGAGCATTTGGAGGTGATAAACGAAGCTTCGGCCTTTGCTGGCGAGGCAGTAGAGCACAACCATGATCTCATGCTTCCTCCATATCCAACCCGTCCGCCCTACGCTCTTCACCTAAACAATGGCCAATTACCACCATCCTTGTCCGCTCGCAAATCTGCCCGCAATGGGGTAACCTTGAACTACACGACGAACGATGCTAAAAGGGAGTCAAGCGAGTCGTTGACTACCAGCAAACAAGCGAGCACGAGAAGCTCGACGAACGGATTAGGTTCACTCATAGCTGCTGCAGCCAAGGCAGTGTTTACCATTGTTGGTGTTGTGTCAATATTGAGCATGTCTGGCTTTGGACAACGAATCGCAGCGAAGAGAGTTAGTCGTTCGAAGATCTCCAATGGGTTTGTTGAACAGCCATCGACCAAAGAAGAGAGACCGATAATTCGATGCCCGCCTGGGAAAATTCTCACGGTGGAAGACGGGGAGGCGCGGTGCGTGGTGAAAGAGAGAGTCGAAGTTCCATTTTCCTCCGCCGTGGCCAAACCAGATGTGAACTATGGATGTGATTTCTCGGATGATGTAGTTAGCCTCATTGAGAGTAAGGAGTAA ATGGAAGAAGACGGCATAGACATGGTTCTTGGCAGAGCCACAGAGCTCCGGTTGAAGATCAGCAACTGCATTCACAAGGCTACAACCATCGCCTCTCTCCTGCAAGACCCATCTGCCGGAGGGGGAAATGAGGCTGCCAATGACGGTGGTTCCACCTCCGAATGTCCTGCCGCCGTCACGGAGGACGACGAAGAAGTGGAACGGCTTTTGAATATCTGCGATGCCCTTGAATCCTTGGAGACCCAACTCTCTTCTTTGCAGGTATTGCAACAACAACAACGATACGAACGGGAAGCTGCTCTGAGTGAGATCGAACACAGCCGCACGATGCTACTCGACAAGCTCAAGAACTACAAAGGTGAGCATTTGGAGGTGATAAACGAAGCTTCGGCCTTTGCTGGCGAGGCAGTAGAGCACAACCATGATCTCATGCTTCCTCCATATCCAACCCGTCCGCCCTACGCTCTTCACCTAAACAATGGCCAATTACCACCATCCTTGTCCGCTCGCAAATCTGCCCGCAATGGGGTAACCTTGAACTACACGACGAACGATGCTAAAAGGGAGTCAAGCGAGTCGTTGACTACCAGCAAACAAGCGAGCACGAGAAGCTCGACGAACGGATTAGGTTCACTCATAGCTGCTGCAGCCAAGGCAGTGTTTACCATTGTTGGTGTTGTGTCAATATTGAGCATGTCTGGCTTTGGACAACGAATCGCAGCGAAGAGAGTTAGTCGTTCGAAGATCTCCAATGGGTTTGTTGAACAGCCATCGACCAAAGAAGAGAGACCGATAATTCGATGCCCGCCTGGGAAAATTCTCACGGTGGAAGACGGGGAGGCGCGGTGCGTGGTGAAAGAGAGAGTCGAAGTTCCATTTTCCTCCGCCGTGGCCAAACCAGATGTGAACTATGGATGTGATTTCTCGGATGATGTAGTTAGCCTCATTGAGAGTAAGGAGTAA
BLAST of CmoCh02G004200 vs. Swiss-Prot
Match: PDV2_ARATH (Plastid division protein PDV2 OS=Arabidopsis thaliana GN=PDV2 PE=1 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.0e-59 Identity = 141/312 (45.19%), Postives = 201/312 (64.42%), Query Frame = 1
BLAST of CmoCh02G004200 vs. Swiss-Prot
Match: PDV1_ARATH (Plastid division protein PDV1 OS=Arabidopsis thaliana GN=PDV1 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.9e-06 Identity = 45/153 (29.41%), Postives = 75/153 (49.02%), Query Frame = 1
BLAST of CmoCh02G004200 vs. TrEMBL
Match: A0A0A0LP41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G238870 PE=4 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 2.0e-115 Identity = 233/306 (76.14%), Postives = 257/306 (83.99%), Query Frame = 1
BLAST of CmoCh02G004200 vs. TrEMBL
Match: B9RZD8_RICCO (Non-symbiotic hemoglobin, putative OS=Ricinus communis GN=RCOM_0938370 PE=3 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 3.2e-73 Identity = 179/328 (54.57%), Postives = 217/328 (66.16%), Query Frame = 1
BLAST of CmoCh02G004200 vs. TrEMBL
Match: V7AGA0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G048500g PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 5.5e-73 Identity = 164/309 (53.07%), Postives = 210/309 (67.96%), Query Frame = 1
BLAST of CmoCh02G004200 vs. TrEMBL
Match: A0A0B2PEZ8_GLYSO (Plastid division protein PDV2 OS=Glycine soja GN=glysoja_031594 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 5.5e-73 Identity = 169/311 (54.34%), Postives = 211/311 (67.85%), Query Frame = 1
BLAST of CmoCh02G004200 vs. TrEMBL
Match: I1LJI0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G121600 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 5.5e-73 Identity = 169/311 (54.34%), Postives = 211/311 (67.85%), Query Frame = 1
BLAST of CmoCh02G004200 vs. TAIR10
Match: AT2G16070.2 (AT2G16070.2 plastid division2) HSP 1 Score: 231.9 bits (590), Expect = 5.6e-61 Identity = 141/312 (45.19%), Postives = 201/312 (64.42%), Query Frame = 1
BLAST of CmoCh02G004200 vs. TAIR10
Match: AT5G53280.1 (AT5G53280.1 plastid division1) HSP 1 Score: 53.5 bits (127), Expect = 2.7e-07 Identity = 45/153 (29.41%), Postives = 75/153 (49.02%), Query Frame = 1
BLAST of CmoCh02G004200 vs. NCBI nr
Match: gi|659118748|ref|XP_008459284.1| (PREDICTED: plastid division protein PDV2 [Cucumis melo]) HSP 1 Score: 433.0 bits (1112), Expect = 4.7e-118 Identity = 237/306 (77.45%), Postives = 265/306 (86.60%), Query Frame = 1
BLAST of CmoCh02G004200 vs. NCBI nr
Match: gi|449455316|ref|XP_004145399.1| (PREDICTED: plastid division protein PDV2 [Cucumis sativus]) HSP 1 Score: 425.6 bits (1093), Expect = 7.5e-116 Identity = 234/307 (76.22%), Postives = 258/307 (84.04%), Query Frame = 1
BLAST of CmoCh02G004200 vs. NCBI nr
Match: gi|700206652|gb|KGN61771.1| (hypothetical protein Csa_2G238870 [Cucumis sativus]) HSP 1 Score: 423.7 bits (1088), Expect = 2.9e-115 Identity = 233/306 (76.14%), Postives = 257/306 (83.99%), Query Frame = 1
BLAST of CmoCh02G004200 vs. NCBI nr
Match: gi|645262389|ref|XP_008236742.1| (PREDICTED: plastid division protein PDV2 [Prunus mume]) HSP 1 Score: 308.9 bits (790), Expect = 1.0e-80 Identity = 177/306 (57.84%), Postives = 217/306 (70.92%), Query Frame = 1
BLAST of CmoCh02G004200 vs. NCBI nr
Match: gi|657990246|ref|XP_008387344.1| (PREDICTED: plastid division protein PDV2-like [Malus domestica]) HSP 1 Score: 307.0 bits (785), Expect = 3.9e-80 Identity = 181/306 (59.15%), Postives = 215/306 (70.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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