CmoCh19G009120 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G009120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Fasciclin-like arabinogalactan protein 6
Location	Cmo_Chr19 : 8542093 .. 8544384 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCACCGCTCTTCTCCTCCTCCTCCTACCCTTTGTTCTGTTCTCTCAAACTCTCGCCCAAGCTTCGATCAACATAACCGGCATTCTGGCCGAAGGCGGCCAATTCAGCACCTTCCTTCGCCTCCTCGGCGAAAGCAACCTGATCTCTCAGCTCGAGAATCAGCTCGACAACTCGCACGAGGGCATGACCATTCTTGCTCCCTCTGATAATGGCTTCAACGCCCTTAAATCCGGCACCCTCAACAGCCTCAACGACCAACAGAAGAGCCAGCTTCTCCTCTTCCATGTCTTGAGTAAGGTATATATTATTAGGAGTGAGTCCACGTTGGATAATTTAGTGGAACATCACTCATTTACATTGATTTGAGACATTTTGAGGAAACTAAAGGTATATATTATTAGGAGTGAGTCCACGTTGGTTAATTTAGTGGAACATCACTCGTTTACATTGATTTGAGACATTTTGAGGAAACCAAAAGCAAAGCCATGAGACCTTATACTAAAGTGGAAAATATCATATAATTGTGGAGAGTCTTAAAGTTATGATAATAATCATATTTTGGTTTGAATTTGATGCAGTTCTACACGGTGACGGATCTGCAGACGGTTAGCAACCCGACGAGGACACTGGCCGGAGACTGGGGGCTGAACTTCACCGGGCAACCGAATTCCAACCAAGTCAATGTATCCACCGGCGTGGTTACGGTGGAGATCAACAATAAGCTAAGAGAGAAATCTCCGTTGGGTGTTTACGTAGTGGATGAAGTTTTGTTGCCTGATGCTCTTTTTGGGAAACACGCCGGCGTACCGCCTCCAAGAGCTCCAGGTCCGAGGGCCGATAATTCTCCCGACGAGGGAACCCCGCCGGAATCTGACGCCGCCAATCCGGCGTCGGATGAGACGGATGGTGGTGTGAGAAACGGCGTGGGATTGGGATTGGTTTTGGGAATTGGTTTGATCGCCATTAGCCTTCTTTTTTAAGAGTTTAGAATCATAGGAGTTGATTTGAGGATAAGTGTGTGCTGCCTTGTCAGCATGCTTTCATTTTCGTTTTTCTTTTTCTTGTAATCTTTTCTTCCACTCTCAAATTTTGATTGATTATTTTTTCTACCATACCTTCTTTTATCAACCTTTTGATTTCAAAATCATAGCTAAATTAATTAATCAAGCACATTAGGGTCTCATTAATTAATTTGGTTCATTAGGTCCTACAATAAATGACTAAAAAATAAATTAACCGATTGTGAGACTTTCATCATTCAACACCTCCCCTCAAACAACGTGAGTCTACCCTTAGTCATTTTTTATTGCCTTCGACCTGTTCTTTTGGAGTTATTTGTTCGATATTTGAGGATTTACCAATCTATTGGCACGACTAAGTTGAAAACATGACTCTGATACCATGTTAGATGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAGCTCCCATGTCTCATACCAACGGAGAGTATTTCTTGATTAAGAAAGTTCACCAATTCTACACTCAACCAAACCGACTAAGACACATATTTTTTCACTTCCAAGAATGGCACATTCCGTTTAAATGGTCTATTTAAGGTTAAACTTGATGTTTTCCTTTTCTTCCATCTAAATTATATTGGAGATTGAAATTTATCAATTAAAAATTTTATTGGAAAGAAAAAATAAATAAATAAGAGGAAAAAAATGTCTGTCGAACACATAAAAAAGAAAATTAAAAAATAAGAAGATAATTAGAAACAAGCAAAATGGACTTGGACACCTAAAGCCTAAAAGAAAGCCAAGTCCAATCCAAAGCCCAACAAGTTGAGCTGTGGGTTTTGGACACTTTGGGCTTTTACACCCTAACGTTATTCTGAAATTATTAAAGGAAAAAAAAAATACTGAAATTATTTCCATAAATAAACCCTAATGTCATTCTGAAATTATTGAAGAAAAAAAAAAAAAAGACTGAAATTATTTCCATAAATGAACCCTAACGTCATTCTGAAATTATTGAAGGAAAAAAAAAAATACTGAAATTATTTCTATAAATACGCCCTAACGTCATTCTGTCGTTCAAAGAAAGACCGTCGGTTAACTTTCGAAGCACTCCCTCTTCTCCTTCGCCAACTCCCTCTCCTCGCGCCAACTCCTCCTTGGCCAAGGTCTGTCCCTCTCCCTGTTCTAATGAGTGTCCAAAGTCAAATAAATGAAGGTCCTCAGTTCTCTTTTCTCACCAACTATTGACACAAATTACATGTAGATATGTGGCCAAACTTGGAGTGAATGA

mRNA sequence

ATGGCCTCCACCGCTCTTCTCCTCCTCCTCCTACCCTTTGTTCTGTTCTCTCAAACTCTCGCCCAAGCTTCGATCAACATAACCGGCATTCTGGCCGAAGGCGGCCAATTCAGCACCTTCCTTCGCCTCCTCGGCGAAAGCAACCTGATCTCTCAGCTCGAGAATCAGCTCGACAACTCGCACGAGGGCATGACCATTCTTGCTCCCTCTGATAATGGCTTCAACGCCCTTAAATCCGGCACCCTCAACAGCCTCAACGACCAACAGAAGAGCCAGCTTCTCCTCTTCCATGTCTTGAGTAAGTTCTACACGGTGACGGATCTGCAGACGGTTAGCAACCCGACGAGGACACTGGCCGGAGACTGGGGGCTGAACTTCACCGGGCAACCGAATTCCAACCAAGTCAATGTATCCACCGGCGTGGTTACGGTGGAGATCAACAATAAGCTAAGAGAGAAATCTCCGTTGGGTGTTTACGTAGTGGATGAAGTTTTGTTGCCTGATGCTCTTTTTGGGAAACACGCCGGCGTACCGCCTCCAAGAGCTCCAGGTCCGAGGGCCGATAATTCTCCCGACGAGGGAACCCCGCCGGAATCTGACGCCGCCAATCCGGCGTCGGATGAGACGGATGGTGGTGTGAGAAACGGCGTGGGATTGGGATTGGTTTTGGGAATTGAAAGACCGTCGGTTAACTTTCGAAGCACTCCCTCTTCTCCTTCGCCAACTCCCTCTCCTCGCGCCAACTCCTCCTTGGCCAAGATATGTGGCCAAACTTGGAGTGAATGA

Coding sequence (CDS)

ATGGCCTCCACCGCTCTTCTCCTCCTCCTCCTACCCTTTGTTCTGTTCTCTCAAACTCTCGCCCAAGCTTCGATCAACATAACCGGCATTCTGGCCGAAGGCGGCCAATTCAGCACCTTCCTTCGCCTCCTCGGCGAAAGCAACCTGATCTCTCAGCTCGAGAATCAGCTCGACAACTCGCACGAGGGCATGACCATTCTTGCTCCCTCTGATAATGGCTTCAACGCCCTTAAATCCGGCACCCTCAACAGCCTCAACGACCAACAGAAGAGCCAGCTTCTCCTCTTCCATGTCTTGAGTAAGTTCTACACGGTGACGGATCTGCAGACGGTTAGCAACCCGACGAGGACACTGGCCGGAGACTGGGGGCTGAACTTCACCGGGCAACCGAATTCCAACCAAGTCAATGTATCCACCGGCGTGGTTACGGTGGAGATCAACAATAAGCTAAGAGAGAAATCTCCGTTGGGTGTTTACGTAGTGGATGAAGTTTTGTTGCCTGATGCTCTTTTTGGGAAACACGCCGGCGTACCGCCTCCAAGAGCTCCAGGTCCGAGGGCCGATAATTCTCCCGACGAGGGAACCCCGCCGGAATCTGACGCCGCCAATCCGGCGTCGGATGAGACGGATGGTGGTGTGAGAAACGGCGTGGGATTGGGATTGGTTTTGGGAATTGAAAGACCGTCGGTTAACTTTCGAAGCACTCCCTCTTCTCCTTCGCCAACTCCCTCTCCTCGCGCCAACTCCTCCTTGGCCAAGATATGTGGCCAAACTTGGAGTGAATGA

Homology

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BLAST of CmoCh19G009120 vs. Swiss-Prot
Match: FLA6_ARATH (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 5.8e-42
Identity = 103/213 (48.36%), Postives = 137/213 (64.32%), Query Frame = 1


Query: 19  TLAQASINITGILAEGGQFSTFLRLLGESNLISQLENQLDNSHEGMTILAPSDNGFNALK 78
           T  ++ IN+T IL  G QF+T ++LL  + +  Q+  QL++S +GMTI AP+DN FN LK
Sbjct: 31  TTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLK 90

Query: 79  SGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQTVSNPTRTLA-----GDWGLNFTGQPNSN 138
            GTLNSL  QQ+ QL+L+H++ K+Y+++DL   SNP RT A     G +GLNFTGQ  SN
Sbjct: 91  PGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSN 150

Query: 139 QVNVSTGVVTVEINNKLREKSPLGVYVVDEVLLPDALFGKHAGVPPPRAPGPRADNSPDE 198
           QVNVSTGVV   INN LR++ PL VYVVD VLLP+ LFG      P  AP P++  S   
Sbjct: 151 QVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFG--TKTTPTGAPAPKSSTS--- 210

Query: 199 GTPPESDAANPASDETDGGVRNGV---GLGLVL 224
                SDA +PA+D+      + V    LG+V+
Sbjct: 211 ----SSDADSPAADDEHKSAGSSVKRTSLGIVV 234

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BLAST of CmoCh19G009120 vs. Swiss-Prot
Match: FLA13_ARATH (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-41
Identity = 115/243 (47.33%), Postives = 147/243 (60.49%), Query Frame = 1


Query: 1   MASTALLLLLLPFVLFSQTLAQ----------ASINITGILAEGGQFSTFLRLLGESNLI 60
           MA+T LLLLLL  V  S  +              INIT IL +GGQF T +RLL  + + 
Sbjct: 1   MATTPLLLLLLTAVFLSTEITAQRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIG 60

Query: 61  SQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQT 120
           +Q+  Q+++S EGMT+LAP+DN F  LK GTLN L+   + +L+L+HV  KFYT+ DL +
Sbjct: 61  NQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLS 120

Query: 121 VSNPTRTLA------GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEV 180
           VSNP RT A      G +GLNFTGQ   NQVNVSTGVV   ++  LR++ PL VYVVD V
Sbjct: 121 VSNPVRTQASGRDVGGVYGLNFTGQ--GNQVNVSTGVVETRLSTSLRQERPLAVYVVDMV 180

Query: 181 LLPDALFGKHAGVPPPRAPGPRADNSPDEGTPPESD--AANPASDETDGGVRNGVGLGLV 226
           LLP+ +FG+      P AP P++  SPD     ES   AA P+  E  G      GLGL 
Sbjct: 181 LLPEEMFGERK--ISPMAPPPKS-KSPDVSDDSESSKKAAAPSESEKSGSGEMNTGLGLG 238

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BLAST of CmoCh19G009120 vs. Swiss-Prot
Match: FLA9_ARATH (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.7e-38
Identity = 105/241 (43.57%), Postives = 148/241 (61.41%), Query Frame = 1


Query: 1   MASTAL----LLLLLPFVLFSQTLAQAS---------INITGILAEGGQFSTFLRLLGES 60
           MA+T L    LLL+   +L ++  AQ +         IN+T IL +GGQF+TF+ LL  +
Sbjct: 1   MATTRLTLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNIT 60

Query: 61  NLISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTD 120
            + SQ+  Q+++S EGMT+ AP+DN F  LK GTLN L+   + +L+L+HV  K+Y++ D
Sbjct: 61  QVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDD 120

Query: 121 LQTVSNPTRTLA-----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVD 180
           L +VSNP RT A     G +GLNFTGQ  +NQ+NVSTG V   I+N LR++ PL VYVVD
Sbjct: 121 LLSVSNPVRTQASGRDNGVYGLNFTGQ--TNQINVSTGYVETRISNSLRQQRPLAVYVVD 180

Query: 181 EVLLPDALFGKHAGVPPPRAPGPRADNSPDEGTPPESDAANPASDETDGGVRNGVGLGLV 224
            VLLP  +FG+H   P   AP  ++    D+    +  AA+P+     G  + G+G GL 
Sbjct: 181 MVLLPGEMFGEHKLSPIAPAPKSKSGGVTDDSGSTKK-AASPSDKSGSGEKKVGLGFGLG 238

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BLAST of CmoCh19G009120 vs. Swiss-Prot
Match: FLA11_ARATH (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 1.7e-33
Identity = 98/226 (43.36%), Postives = 132/226 (58.41%), Query Frame = 1


Query: 9   LLLPFVLFSQTLAQASI-------NITGILAEGGQFSTFLRLLGESNLISQLENQLDNSH 68
           L + F++ + T  QA         NIT IL + GQF+ F+RLL  +    Q+  QL++S 
Sbjct: 12  LFIFFLVIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSS 71

Query: 69  E-GMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQTVSNPTRTLAG 128
             G+T+ AP+DN FN+LKSGTLNSL+DQQK QL+ FHVL    T+   QTVSNP RT AG
Sbjct: 72  SNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAG 131

Query: 129 D-----WGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEVLLPDALFGKHA 188
           D     + LN T   + NQVN++TGVV+  + N +     L VY VD+VLLP A+FG  +
Sbjct: 132 DGQNGKFPLNITS--SGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG--S 191

Query: 189 GVPPPRAPGPRADNSPDEGTPPESDAANPASDETDGGVRNGVGLGL 222
            V P  AP P    S  +G+    D    ++D +D   R G G G+
Sbjct: 192 SVAP--APAPEKGGSVSKGSASGGDDGGDSTDSSD-AERTGFGFGI 230

[Close]

BLAST of CmoCh19G009120 vs. Swiss-Prot
Match: FLA12_ARATH (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-27
Identity = 83/211 (39.34%), Postives = 121/211 (57.35%), Query Frame = 1


Query: 6   LLLLLLPFVLFSQTLAQASI-----NITGILAEGGQFSTFLRLLGESNLISQLENQLDNS 65
           LLL   P +L   + A A       N+T IL + GQF+ F+RLL  + + +QL  QL+NS
Sbjct: 14  LLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNS 73

Query: 66  HEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQTVSNPTRTLAG 125
             G+TI APSD+ F  LK+GTLNSL D+Q+ +L+ FHV+  + + ++ QT+SNP RT AG
Sbjct: 74  DNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAG 133

Query: 126 D-----WGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEVLLPDALFGKHA 185
           D     + LN T   + N VN+++GV    ++  +     L VY VD+VLLP  +F    
Sbjct: 134 DSADGHFPLNVT--TSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFD--- 193

Query: 186 GVPPPRAPGPRADNSPDEGTPPESDAANPAS 207
             P P AP P    S  +    +SD+++  S
Sbjct: 194 --PRPPAPAPAPSVSKSKKKKDDSDSSSDDS 217

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BLAST of CmoCh19G009120 vs. TrEMBL
Match: A0A0A0K1Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G039260 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.8e-75
Identity = 157/235 (66.81%), Postives = 187/235 (79.57%), Query Frame = 1


Query: 1   MASTALLLLLLPFVLFSQTLAQAS----------INITGILAEGGQFSTFLRLLGESNLI 60
           MAS ALLLLLLPF LF QTLAQ            IN+TGIL+EGGQFSTF+RLL ES LI
Sbjct: 1   MASAALLLLLLPFALFCQTLAQTPAAPGPSPPGPINLTGILSEGGQFSTFIRLLNESRLI 60

Query: 61  SQLENQLDNSHEG-MTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQ 120
           +QL+NQL+NS  G +TILAP+DNGFN+L+ G LN+L+DQQKSQLLL+HVL KFYT+ +LQ
Sbjct: 61  TQLDNQLNNSQGGGLTILAPTDNGFNSLRPGALNALDDQQKSQLLLYHVLPKFYTLIELQ 120

Query: 121 TVSNPTRTLAGDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEVLLPDA 180
           TVSNP RT AGDWGLNFTGQ NSNQVNVSTG++T  INNKLRE+SPL ++VVD+VLLPDA
Sbjct: 121 TVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIITAPINNKLREQSPLSIFVVDQVLLPDA 180

Query: 181 LFGKHAGVPPPRAPGPRADNSPDEG-TPPESDAANPASDETDGGVRNGVGLGLVL 224
           LFG H    PP+AP P  D +P +G TPP+SDAA P +++     +NGVGLGL+L
Sbjct: 181 LFGNHTAA-PPKAPAPGTDKAPVDGETPPKSDAAKPPANDKSAVTKNGVGLGLIL 234

[Close]

BLAST of CmoCh19G009120 vs. TrEMBL
Match: W9QUZ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010536 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.1e-46
Identity = 121/239 (50.63%), Postives = 159/239 (66.53%), Query Frame = 1


Query: 1   MASTA--LLLLLLPFVLFS-QTLAQ---------ASINITGILAEGGQFSTFLRLLGESN 60
           MAST   +LL L PF+L S QTLA            +N+T IL +GGQ++T LRLL E+ 
Sbjct: 1   MASTLSLILLTLTPFLLLSHQTLADDQEAPAPSSGPVNLTAILVKGGQYTTLLRLLSETQ 60

Query: 61  LISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDL 120
           + +Q+ENQL++S EGMT+ AP+DN FN LK+GTLN L+ + + QL+L+HVL K+Y++ +L
Sbjct: 61  VDNQIENQLNSSKEGMTVFAPTDNAFNNLKAGTLNGLSREDQVQLILYHVLPKYYSLENL 120

Query: 121 QTVSNPTRTLAGDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEVLLPD 180
           QTVSNP RT + + GLNFTGQ   +QVNVSTG+V  ++NN LRE+ PL VY VD VLLP+
Sbjct: 121 QTVSNPVRTQSSNDGLNFTGQ--GHQVNVSTGIVETQVNNALREEFPLAVYQVDAVLLPE 180

Query: 181 ALFGKH--AGVPPPRAPGPRADNSPDEGTPPESDAANPASDETDGGVRNGVGLGLVLGI 226
            LFG    A  PPP    P AD++ D+       AA  A D T    +  VGLGLV G+
Sbjct: 181 GLFGAKAPASAPPPAKSTP-ADSASDKA--KTKAAAPSAKDSTGDSNKRNVGLGLVAGL 234

[Close]

BLAST of CmoCh19G009120 vs. TrEMBL
Match: B9RVS1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1171550 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.2e-43
Identity = 116/242 (47.93%), Postives = 158/242 (65.29%), Query Frame = 1


Query: 1   MASTALLLLLLPFVLFS-QTLAQ----------ASINITGILAEGGQFSTFLRLLGESNL 60
           MA+T LL L    +L S Q  AQ            +N+TGIL + GQF+TF+RLL  + +
Sbjct: 1   MATTTLLPLTALILLLSLQAQAQNPAAPAPAPSGPLNVTGILDKNGQFTTFIRLLTSTQV 60

Query: 61  ISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQ 120
            +QLENQL+++ EG T+ AP+DN FN LK+GTLN L+ QQ+ QL+L H+  KFYT+++L 
Sbjct: 61  ATQLENQLNSTTEGFTVFAPTDNAFNNLKAGTLNDLSTQQQVQLVLAHITPKFYTLSNLL 120

Query: 121 TVSNPTRTLA-----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEV 180
            V NP RT A     G +GLNFTGQ  +NQVNVSTG+V  +INN +R++ PL +Y VD+V
Sbjct: 121 LVPNPVRTQATGQDGGVFGLNFTGQ--ANQVNVSTGIVETQINNAIRQQFPLALYQVDKV 180

Query: 181 LLPDALFGKHAGVPPPRAPGPRADNSPDEGTPPESDAANPASDE-TDGGVRNGVGLGLVL 226
           LLP+ LFG     PP  +P P A  S    +  ++ A+ P+SD+ T GGVR  V LG V+
Sbjct: 181 LLPEELFGVK---PPTASPAPPAKTSSGGSSKNDTVASEPSSDKGTSGGVRTNVALGFVI 237

[Close]

BLAST of CmoCh19G009120 vs. TrEMBL
Match: U5FW74_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s12490g PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.2e-43
Identity = 120/241 (49.79%), Postives = 153/241 (63.49%), Query Frame = 1


Query: 1   MASTALLLLLLPFVLFSQTLAQAS------------INITGILAEGGQFSTFLRLLGESN 60
           MA+T L   LL  +  S   AQA             +N T +L +GGQF+T +RLL  + 
Sbjct: 1   MATTPLSFFLLSLLSLSLN-AQAQTPTAPAPTPSGPVNFTAVLVKGGQFATLIRLLNNTQ 60

Query: 61  LISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDL 120
            ++Q+ENQL++S EGMTI AP+DN FN LK+G LN LN Q++ QLL +H L KFYT+++L
Sbjct: 61  TLNQIENQLNSSSEGMTIFAPTDNAFNNLKAGALNGLNQQEQVQLLQYHTLPKFYTMSNL 120

Query: 121 QTVSNPTRTLA----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEV 180
             VSNP  T A    G WGLNFTGQ  SNQVNVSTG+V V+INN LR+ SPL VY VD+V
Sbjct: 121 LLVSNPVPTQASGQDGVWGLNFTGQ--SNQVNVSTGLVEVQINNALRQDSPLAVYPVDKV 180

Query: 181 LLPDALFGKHAGVPPPRAPGPRADNSPDEGTPPESDAANPASDETDGGVRNGVGLGLVLG 226
           LLP+ALF    GV PP A  P    +P   +     AA P++ +   G RN V LGLV+G
Sbjct: 181 LLPEALF----GVKPPTASPP----APSSKSNSTVAAAEPSTGKNSAGGRN-VALGLVVG 229

[Close]

BLAST of CmoCh19G009120 vs. TrEMBL
Match: A0A0B2RW49_GLYSO (Fasciclin-like arabinogalactan protein 6 OS=Glycine soja GN=glysoja_001404 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.8e-43
Identity = 111/238 (46.64%), Postives = 150/238 (63.03%), Query Frame = 1


Query: 3   STALLLLLLPFVLFSQTLAQA-------SINITGILAEGGQFSTFLRLLGESNLISQLEN 62
           S  L+LL+L   L +QT AQA       ++N+T IL +GGQ++T ++LL ++  ++Q+E+
Sbjct: 5   SFTLILLILTTFLMAQTQAQAPAPAPSGAVNLTAILEKGGQYTTLIKLLKDTQQLTQIES 64

Query: 63  QLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQTVSNPT 122
           QL ++ +G T+ AP+DN F +LK G LN L+D +K +L+LFHV  K+YT++DL TVSNP 
Sbjct: 65  QLKSNSQGFTLFAPTDNAFQSLKPGALNDLSDDKKVKLILFHVTPKYYTISDLLTVSNPV 124

Query: 123 RTLA----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEVLLPDALF 182
           RT A    G WGLNFTGQ   NQVN+STGVV  ++NN LREK PL VY VD+VLLP  LF
Sbjct: 125 RTQATEEEGTWGLNFTGQ-GGNQVNISTGVVQTQLNNALREKFPLAVYQVDKVLLPLELF 184

Query: 183 GKHAGVPPPRAPGPRADNSPDE--GTPPESDAANPASDETDGGVRNG--VGLGLVLGI 226
           G         AP P+   S  E         A +P  D+ D    NG  V  GLV+G+
Sbjct: 185 GTTKTTHSSEAPSPKGSKSTPEIPSVGKAGGAPSPHGDKKDTNAANGRNVAFGLVVGL 241

[Close]

BLAST of CmoCh19G009120 vs. TAIR10
Match: AT2G20520.1 (AT2G20520.1 FASCICLIN-like arabinogalactan 6)

HSP 1 Score: 172.6 bits (436), Expect = 3.3e-43
Identity = 103/213 (48.36%), Postives = 137/213 (64.32%), Query Frame = 1


Query: 19  TLAQASINITGILAEGGQFSTFLRLLGESNLISQLENQLDNSHEGMTILAPSDNGFNALK 78
           T  ++ IN+T IL  G QF+T ++LL  + +  Q+  QL++S +GMTI AP+DN FN LK
Sbjct: 31  TTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLK 90

Query: 79  SGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQTVSNPTRTLA-----GDWGLNFTGQPNSN 138
            GTLNSL  QQ+ QL+L+H++ K+Y+++DL   SNP RT A     G +GLNFTGQ  SN
Sbjct: 91  PGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSN 150

Query: 139 QVNVSTGVVTVEINNKLREKSPLGVYVVDEVLLPDALFGKHAGVPPPRAPGPRADNSPDE 198
           QVNVSTGVV   INN LR++ PL VYVVD VLLP+ LFG      P  AP P++  S   
Sbjct: 151 QVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFG--TKTTPTGAPAPKSSTS--- 210

Query: 199 GTPPESDAANPASDETDGGVRNGV---GLGLVL 224
                SDA +PA+D+      + V    LG+V+
Sbjct: 211 ----SSDADSPAADDEHKSAGSSVKRTSLGIVV 234

[Close]

BLAST of CmoCh19G009120 vs. TAIR10
Match: AT5G44130.1 (AT5G44130.1 FASCICLIN-like arabinogalactan protein 13 precursor)

HSP 1 Score: 171.8 bits (434), Expect = 5.6e-43
Identity = 115/243 (47.33%), Postives = 147/243 (60.49%), Query Frame = 1


Query: 1   MASTALLLLLLPFVLFSQTLAQ----------ASINITGILAEGGQFSTFLRLLGESNLI 60
           MA+T LLLLLL  V  S  +              INIT IL +GGQF T +RLL  + + 
Sbjct: 1   MATTPLLLLLLTAVFLSTEITAQRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIG 60

Query: 61  SQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQT 120
           +Q+  Q+++S EGMT+LAP+DN F  LK GTLN L+   + +L+L+HV  KFYT+ DL +
Sbjct: 61  NQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLS 120

Query: 121 VSNPTRTLA------GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEV 180
           VSNP RT A      G +GLNFTGQ   NQVNVSTGVV   ++  LR++ PL VYVVD V
Sbjct: 121 VSNPVRTQASGRDVGGVYGLNFTGQ--GNQVNVSTGVVETRLSTSLRQERPLAVYVVDMV 180

Query: 181 LLPDALFGKHAGVPPPRAPGPRADNSPDEGTPPESD--AANPASDETDGGVRNGVGLGLV 226
           LLP+ +FG+      P AP P++  SPD     ES   AA P+  E  G      GLGL 
Sbjct: 181 LLPEEMFGERK--ISPMAPPPKS-KSPDVSDDSESSKKAAAPSESEKSGSGEMNTGLGLG 238

[Close]

BLAST of CmoCh19G009120 vs. TAIR10
Match: AT1G03870.1 (AT1G03870.1 FASCICLIN-like arabinoogalactan 9)

HSP 1 Score: 159.1 bits (401), Expect = 3.8e-39
Identity = 105/241 (43.57%), Postives = 148/241 (61.41%), Query Frame = 1


Query: 1   MASTAL----LLLLLPFVLFSQTLAQAS---------INITGILAEGGQFSTFLRLLGES 60
           MA+T L    LLL+   +L ++  AQ +         IN+T IL +GGQF+TF+ LL  +
Sbjct: 1   MATTRLTLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNIT 60

Query: 61  NLISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTD 120
            + SQ+  Q+++S EGMT+ AP+DN F  LK GTLN L+   + +L+L+HV  K+Y++ D
Sbjct: 61  QVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDD 120

Query: 121 LQTVSNPTRTLA-----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVD 180
           L +VSNP RT A     G +GLNFTGQ  +NQ+NVSTG V   I+N LR++ PL VYVVD
Sbjct: 121 LLSVSNPVRTQASGRDNGVYGLNFTGQ--TNQINVSTGYVETRISNSLRQQRPLAVYVVD 180

Query: 181 EVLLPDALFGKHAGVPPPRAPGPRADNSPDEGTPPESDAANPASDETDGGVRNGVGLGLV 224
            VLLP  +FG+H   P   AP  ++    D+    +  AA+P+     G  + G+G GL 
Sbjct: 181 MVLLPGEMFGEHKLSPIAPAPKSKSGGVTDDSGSTKK-AASPSDKSGSGEKKVGLGFGLG 238

[Close]

BLAST of CmoCh19G009120 vs. TAIR10
Match: AT5G03170.1 (AT5G03170.1 FASCICLIN-like arabinogalactan-protein 11)

HSP 1 Score: 144.4 bits (363), Expect = 9.6e-35
Identity = 98/226 (43.36%), Postives = 132/226 (58.41%), Query Frame = 1


Query: 9   LLLPFVLFSQTLAQASI-------NITGILAEGGQFSTFLRLLGESNLISQLENQLDNSH 68
           L + F++ + T  QA         NIT IL + GQF+ F+RLL  +    Q+  QL++S 
Sbjct: 12  LFIFFLVIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSS 71

Query: 69  E-GMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQTVSNPTRTLAG 128
             G+T+ AP+DN FN+LKSGTLNSL+DQQK QL+ FHVL    T+   QTVSNP RT AG
Sbjct: 72  SNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAG 131

Query: 129 D-----WGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEVLLPDALFGKHA 188
           D     + LN T   + NQVN++TGVV+  + N +     L VY VD+VLLP A+FG  +
Sbjct: 132 DGQNGKFPLNITS--SGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG--S 191

Query: 189 GVPPPRAPGPRADNSPDEGTPPESDAANPASDETDGGVRNGVGLGL 222
            V P  AP P    S  +G+    D    ++D +D   R G G G+
Sbjct: 192 SVAP--APAPEKGGSVSKGSASGGDDGGDSTDSSD-AERTGFGFGI 230

[Close]

BLAST of CmoCh19G009120 vs. TAIR10
Match: AT5G60490.1 (AT5G60490.1 FASCICLIN-like arabinogalactan-protein 12)

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 83/211 (39.34%), Postives = 121/211 (57.35%), Query Frame = 1


Query: 6   LLLLLLPFVLFSQTLAQASI-----NITGILAEGGQFSTFLRLLGESNLISQLENQLDNS 65
           LLL   P +L   + A A       N+T IL + GQF+ F+RLL  + + +QL  QL+NS
Sbjct: 14  LLLTTTPGILSQPSPAVAPAPPGPTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNS 73

Query: 66  HEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQTVSNPTRTLAG 125
             G+TI APSD+ F  LK+GTLNSL D+Q+ +L+ FHV+  + + ++ QT+SNP RT AG
Sbjct: 74  DNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAG 133

Query: 126 D-----WGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEVLLPDALFGKHA 185
           D     + LN T   + N VN+++GV    ++  +     L VY VD+VLLP  +F    
Sbjct: 134 DSADGHFPLNVT--TSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFD--- 193

Query: 186 GVPPPRAPGPRADNSPDEGTPPESDAANPAS 207
             P P AP P    S  +    +SD+++  S
Sbjct: 194 --PRPPAPAPAPSVSKSKKKKDDSDSSSDDS 217

[Close]

BLAST of CmoCh19G009120 vs. NCBI nr
Match: gi|659110934|ref|XP_008455488.1| (PREDICTED: fasciclin-like arabinogalactan protein 6 [Cucumis melo])

HSP 1 Score: 303.1 bits (775), Expect = 4.6e-79
Identity = 166/236 (70.34%), Postives = 193/236 (81.78%), Query Frame = 1


Query: 1   MASTALLLLLL-PFVLFSQTLAQAS----------INITGILAEGGQFSTFLRLLGESNL 60
           MAS ALLLLLL PF LFSQTLAQ            IN+TGIL++GGQFSTF+RLL +S L
Sbjct: 1   MASPALLLLLLLPFALFSQTLAQTPAAPAPSPPGPINLTGILSQGGQFSTFIRLLNQSRL 60

Query: 61  ISQLENQLDNSH-EGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDL 120
           I QL+NQL+NS  EG+TILAP+DNGFNAL+SG LNSL+DQQKSQLLL+HVL KFYT+T+L
Sbjct: 61  IIQLDNQLNNSQGEGLTILAPTDNGFNALESGALNSLDDQQKSQLLLYHVLPKFYTLTEL 120

Query: 121 QTVSNPTRTLAGDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEVLLPD 180
           QT+SNP RT AGDWGLNFTGQ NSNQVNVSTGVVTV INNKLRE+SPL V+VVD+VLLP+
Sbjct: 121 QTISNPVRTQAGDWGLNFTGQANSNQVNVSTGVVTVPINNKLREQSPLSVFVVDKVLLPE 180

Query: 181 ALFGKHAGVPPPRAPGPRADNSPDEG-TPPESDAANPASDETDGGVRNGVGLGLVL 224
           ALFG H   PPP+AP P AD +P +G TPP+SDAA P +++     RNGVGLGL+L
Sbjct: 181 ALFGNHTAAPPPKAPAPGADKAPVDGETPPKSDAAKPPANDKGAAARNGVGLGLIL 236

[Close]

BLAST of CmoCh19G009120 vs. NCBI nr
Match: gi|449453549|ref|XP_004144519.1| (PREDICTED: fasciclin-like arabinogalactan protein 13 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 4.0e-75
Identity = 157/235 (66.81%), Postives = 187/235 (79.57%), Query Frame = 1


Query: 1   MASTALLLLLLPFVLFSQTLAQAS----------INITGILAEGGQFSTFLRLLGESNLI 60
           MAS ALLLLLLPF LF QTLAQ            IN+TGIL+EGGQFSTF+RLL ES LI
Sbjct: 1   MASAALLLLLLPFALFCQTLAQTPAAPGPSPPGPINLTGILSEGGQFSTFIRLLNESRLI 60

Query: 61  SQLENQLDNSHEG-MTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQ 120
           +QL+NQL+NS  G +TILAP+DNGFN+L+ G LN+L+DQQKSQLLL+HVL KFYT+ +LQ
Sbjct: 61  TQLDNQLNNSQGGGLTILAPTDNGFNSLRPGALNALDDQQKSQLLLYHVLPKFYTLIELQ 120

Query: 121 TVSNPTRTLAGDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEVLLPDA 180
           TVSNP RT AGDWGLNFTGQ NSNQVNVSTG++T  INNKLRE+SPL ++VVD+VLLPDA
Sbjct: 121 TVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIITAPINNKLREQSPLSIFVVDQVLLPDA 180

Query: 181 LFGKHAGVPPPRAPGPRADNSPDEG-TPPESDAANPASDETDGGVRNGVGLGLVL 224
           LFG H    PP+AP P  D +P +G TPP+SDAA P +++     +NGVGLGL+L
Sbjct: 181 LFGNHTAA-PPKAPAPGTDKAPVDGETPPKSDAAKPPANDKSAVTKNGVGLGLIL 234

[Close]

BLAST of CmoCh19G009120 vs. NCBI nr
Match: gi|703090027|ref|XP_010093970.1| (hypothetical protein L484_010536 [Morus notabilis])

HSP 1 Score: 192.6 bits (488), Expect = 8.7e-46
Identity = 121/239 (50.63%), Postives = 159/239 (66.53%), Query Frame = 1


Query: 1   MASTA--LLLLLLPFVLFS-QTLAQ---------ASINITGILAEGGQFSTFLRLLGESN 60
           MAST   +LL L PF+L S QTLA            +N+T IL +GGQ++T LRLL E+ 
Sbjct: 1   MASTLSLILLTLTPFLLLSHQTLADDQEAPAPSSGPVNLTAILVKGGQYTTLLRLLSETQ 60

Query: 61  LISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDL 120
           + +Q+ENQL++S EGMT+ AP+DN FN LK+GTLN L+ + + QL+L+HVL K+Y++ +L
Sbjct: 61  VDNQIENQLNSSKEGMTVFAPTDNAFNNLKAGTLNGLSREDQVQLILYHVLPKYYSLENL 120

Query: 121 QTVSNPTRTLAGDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEVLLPD 180
           QTVSNP RT + + GLNFTGQ   +QVNVSTG+V  ++NN LRE+ PL VY VD VLLP+
Sbjct: 121 QTVSNPVRTQSSNDGLNFTGQ--GHQVNVSTGIVETQVNNALREEFPLAVYQVDAVLLPE 180

Query: 181 ALFGKH--AGVPPPRAPGPRADNSPDEGTPPESDAANPASDETDGGVRNGVGLGLVLGI 226
            LFG    A  PPP    P AD++ D+       AA  A D T    +  VGLGLV G+
Sbjct: 181 GLFGAKAPASAPPPAKSTP-ADSASDKA--KTKAAAPSAKDSTGDSNKRNVGLGLVAGL 234

[Close]

BLAST of CmoCh19G009120 vs. NCBI nr
Match: gi|255553599|ref|XP_002517840.1| (PREDICTED: fasciclin-like arabinogalactan protein 6 [Ricinus communis])

HSP 1 Score: 184.1 bits (466), Expect = 3.1e-43
Identity = 116/242 (47.93%), Postives = 158/242 (65.29%), Query Frame = 1


Query: 1   MASTALLLLLLPFVLFS-QTLAQ----------ASINITGILAEGGQFSTFLRLLGESNL 60
           MA+T LL L    +L S Q  AQ            +N+TGIL + GQF+TF+RLL  + +
Sbjct: 1   MATTTLLPLTALILLLSLQAQAQNPAAPAPAPSGPLNVTGILDKNGQFTTFIRLLTSTQV 60

Query: 61  ISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDLQ 120
            +QLENQL+++ EG T+ AP+DN FN LK+GTLN L+ QQ+ QL+L H+  KFYT+++L 
Sbjct: 61  ATQLENQLNSTTEGFTVFAPTDNAFNNLKAGTLNDLSTQQQVQLVLAHITPKFYTLSNLL 120

Query: 121 TVSNPTRTLA-----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEV 180
            V NP RT A     G +GLNFTGQ  +NQVNVSTG+V  +INN +R++ PL +Y VD+V
Sbjct: 121 LVPNPVRTQATGQDGGVFGLNFTGQ--ANQVNVSTGIVETQINNAIRQQFPLALYQVDKV 180

Query: 181 LLPDALFGKHAGVPPPRAPGPRADNSPDEGTPPESDAANPASDE-TDGGVRNGVGLGLVL 226
           LLP+ LFG     PP  +P P A  S    +  ++ A+ P+SD+ T GGVR  V LG V+
Sbjct: 181 LLPEELFGVK---PPTASPAPPAKTSSGGSSKNDTVASEPSSDKGTSGGVRTNVALGFVI 237

[Close]

BLAST of CmoCh19G009120 vs. NCBI nr
Match: gi|566200927|ref|XP_006376379.1| (hypothetical protein POPTR_0013s12490g [Populus trichocarpa])

HSP 1 Score: 184.1 bits (466), Expect = 3.1e-43
Identity = 120/241 (49.79%), Postives = 153/241 (63.49%), Query Frame = 1


Query: 1   MASTALLLLLLPFVLFSQTLAQAS------------INITGILAEGGQFSTFLRLLGESN 60
           MA+T L   LL  +  S   AQA             +N T +L +GGQF+T +RLL  + 
Sbjct: 1   MATTPLSFFLLSLLSLSLN-AQAQTPTAPAPTPSGPVNFTAVLVKGGQFATLIRLLNNTQ 60

Query: 61  LISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFYTVTDL 120
            ++Q+ENQL++S EGMTI AP+DN FN LK+G LN LN Q++ QLL +H L KFYT+++L
Sbjct: 61  TLNQIENQLNSSSEGMTIFAPTDNAFNNLKAGALNGLNQQEQVQLLQYHTLPKFYTMSNL 120

Query: 121 QTVSNPTRTLA----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDEV 180
             VSNP  T A    G WGLNFTGQ  SNQVNVSTG+V V+INN LR+ SPL VY VD+V
Sbjct: 121 LLVSNPVPTQASGQDGVWGLNFTGQ--SNQVNVSTGLVEVQINNALRQDSPLAVYPVDKV 180

Query: 181 LLPDALFGKHAGVPPPRAPGPRADNSPDEGTPPESDAANPASDETDGGVRNGVGLGLVLG 226
           LLP+ALF    GV PP A  P    +P   +     AA P++ +   G RN V LGLV+G
Sbjct: 181 LLPEALF----GVKPPTASPP----APSSKSNSTVAAAEPSTGKNSAGGRN-VALGLVVG 229

The following BLAST results are available for this feature:

BLAST of CmoCh19G009120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FLA6_ARATH	5.8e-42	48.36	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV...	[more]
FLA13_ARATH	1.0e-41	47.33	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 ...	[more]
FLA9_ARATH	6.7e-38	43.57	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV...	[more]
FLA11_ARATH	1.7e-33	43.36	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 ...	[more]
FLA12_ARATH	1.8e-27	39.34	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 ...	[more]

BLAST of CmoCh19G009120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1Z9_CUCSA	2.8e-75	66.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G039260 PE=4 SV=1	[more]
W9QUZ8_9ROSA	6.1e-46	50.63	Uncharacterized protein OS=Morus notabilis GN=L484_010536 PE=4 SV=1	[more]
B9RVS1_RICCO	2.2e-43	47.93	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1171550 PE=4 SV=1	[more]
U5FW74_POPTR	2.2e-43	49.79	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s12490g PE=4 SV=1	[more]
A0A0B2RW49_GLYSO	2.8e-43	46.64	Fasciclin-like arabinogalactan protein 6 OS=Glycine soja GN=glysoja_001404 PE=4 ...	[more]

BLAST of CmoCh19G009120 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20520.1	3.3e-43	48.36	FASCICLIN-like arabinogalactan 6	[more]
AT5G44130.1	5.6e-43	47.33	FASCICLIN-like arabinogalactan protein 13 precursor	[more]
AT1G03870.1	3.8e-39	43.57	FASCICLIN-like arabinoogalactan 9	[more]
AT5G03170.1	9.6e-35	43.36	FASCICLIN-like arabinogalactan-protein 11	[more]
AT5G60490.1	1.0e-28	39.34	FASCICLIN-like arabinogalactan-protein 12	[more]

BLAST of CmoCh19G009120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110934\|ref\|XP_008455488.1\|	4.6e-79	70.34	PREDICTED: fasciclin-like arabinogalactan protein 6 [Cucumis melo]	[more]
gi\|449453549\|ref\|XP_004144519.1\|	4.0e-75	66.81	PREDICTED: fasciclin-like arabinogalactan protein 13 [Cucumis sativus]	[more]
gi\|703090027\|ref\|XP_010093970.1\|	8.7e-46	50.63	hypothetical protein L484_010536 [Morus notabilis]	[more]
gi\|255553599\|ref\|XP_002517840.1\|	3.1e-43	47.93	PREDICTED: fasciclin-like arabinogalactan protein 6 [Ricinus communis]	[more]
gi\|566200927\|ref\|XP_006376379.1\|	3.1e-43	49.79	hypothetical protein POPTR_0013s12490g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000782	FAS1_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044699	single-organism process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G009120.1	CmoCh19G009120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	GENE3D	G3DSA:2.30.180.10		coord: 26..167 score: 1.8
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 36..167 score: 2.4
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 65..168 score: 1.9
IPR000782	FAS1 domain	PROFILE	PS50213	FAS1	coord: 24..165 score: 18
IPR000782	FAS1 domain	unknown	SSF82153	FAS1 domain	coord: 18..168 score: 1.14
None	No IPR available	PANTHER	PTHR32077	FAMILY NOT NAMED	coord: 1..225 score: 5.2
None	No IPR available	PANTHER	PTHR32077:SF6	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13-RELATED	coord: 1..225 score: 5.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G009120	Cucsa.181220	Cucumber (Gy14) v1	cgycmoB0516
CmoCh19G009120	CmaCh11G018020	Cucurbita maxima (Rimu)	cmacmoB142
CmoCh19G009120	CmaCh19G008950	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G009120	Cla015635	Watermelon (97103) v1	cmowmB496
CmoCh19G009120	Csa7G039260	Cucumber (Chinese Long) v2	cmocuB518
CmoCh19G009120	MELO3C018862	Melon (DHL92) v3.5.1	cmomeB452
CmoCh19G009120	ClCG02G002290	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G009120	CSPI07G03270	Wild cucumber (PI 183967)	cmocpiB524
CmoCh19G009120	Lsi11G014010	Bottle gourd (USVL1VR-Ls)	cmolsiB457
CmoCh19G009120	Cp4.1LG15g07270	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G009120	Cp4.1LG04g03710	Cucurbita pepo (Zucchini)	cmocpeB492
CmoCh19G009120	MELO3C018862.2	Melon (DHL92) v3.6.1	cmomedB521
CmoCh19G009120	CsaV3_7G003150	Cucumber (Chinese Long) v3	cmocucB0622
CmoCh19G009120	Cla97C02G028720	Watermelon (97103) v2	cmowmbB512
CmoCh19G009120	Bhi05G001228	Wax gourd	cmowgoB0653
CmoCh19G009120	CsGy7G002910	Cucumber (Gy14) v2	cgybcmoB927
CmoCh19G009120	Carg18041	Silver-seed gourd	carcmoB1430
CmoCh19G009120	Carg04178	Silver-seed gourd	carcmoB0286

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh19G009120	CmoCh11G018760	Cucurbita moschata (Rifu)	cmocmoB108

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G009120	Melon (DHL92) v3.6.1	cmomedB513
CmoCh19G009120	Cucumber (Chinese Long) v3	cmocucB0592
CmoCh19G009120	Wax gourd	cmowgoB0663
CmoCh19G009120	Cucurbita moschata (Rifu)	cmocmoB381
CmoCh19G009120	Cucurbita maxima (Rimu)	cmacmoB547
CmoCh19G009120	Wild cucumber (PI 183967)	cmocpiB501
CmoCh19G009120	Cucumber (Chinese Long) v2	cmocuB493
CmoCh19G009120	Melon (DHL92) v3.5.1	cmomeB443
CmoCh19G009120	Cucurbita pepo (Zucchini)	cmocpeB483
CmoCh19G009120	Cucumber (Gy14) v2	cgybcmoB204