CmaCh19G008950 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G008950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Fasciclin-like arabinogalactan protein 6
Location	Cma_Chr19 : 8178698 .. 8179707 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCACCGCGCTTCCCCTCCTCCTCCTACCCTTTGTTCTGTTCTCTCAAACTCTCGCCCAAGCTCCGATCAACATAACCGGCATTCTGGCCGAAGGCGGCCAATTCAGCACCTTCCTTCGCCTCCTCGGCGAAAGCAACCTGATCTCTCAGCTCGAGAATCAGCTCGACAACTCGCATGAGGGCATGACCATTCTTGCTCCCTCTGATAATGGCTTCAACGCCCTTAAATCCGGCACCCTCAACAGCCTCAACGACCAGCAGAAGAGCCAGCTTCTCCTCTTCCATGTCTTGAGTAAGGTATATATATATTTATATATATATTTGAGGATTATTAAGAGGGAGTTGTTACTTTAGTGGAAGATTATGGATCTATAAGTTTGAGTAATACTATTTACATGGGTAGAATATATCTTGGAAACTCAAAGTGGACAATATCAATGATATCATTGTGGAGGGTAAGTTACGATAATAATCCTATTTGGGTTTGAATTTGATGCAGTTCTTCACCGTGACGGATCTGCAGACCGTTAGCAACCCGATGAGGACACTCGCCGGAGACTGGGGGCTGAACTTCACCGGCCAACCGAATTCTAACCAAGTCAATGTATCCACAGGCGTGGTTACGGTGGAGATCAACAATAAGCTCAGGGAGAAATCTCCGTTGGGTGTTTACGTAGTGGATCAAGTTTTGTTGCCTGACGCTCTTTTTGGGAAACACGCCGGCGTACCGCCTCCAAGAGCTCCAGGTCCAAGGGCCGATAATTCTCCTGACGAGGGAAACCCGCCGGAATCTGACGCCGCCAATCCGCCGTCGGATGAGACGGATGGTGGTGTGAGGAACGGCGTCGGATTGGGATTGGTTTTGGGATTTGGTTTGATTGCCATTAGCCTTCTTTTTTAAGAGTTTAGAATCATAGGAGTTGATTTGAGGATAAGTGTGTGCTGCCTTGTCAGCATGCTTTGATTTTCGTTTTTCTTTTTCTTGTAATTTTTTCTACCACTCA

mRNA sequence

ATGGCCTCCACCGCGCTTCCCCTCCTCCTCCTACCCTTTGTTCTGTTCTCTCAAACTCTCGCCCAAGCTCCGATCAACATAACCGGCATTCTGGCCGAAGGCGGCCAATTCAGCACCTTCCTTCGCCTCCTCGGCGAAAGCAACCTGATCTCTCAGCTCGAGAATCAGCTCGACAACTCGCATGAGGGCATGACCATTCTTGCTCCCTCTGATAATGGCTTCAACGCCCTTAAATCCGGCACCCTCAACAGCCTCAACGACCAGCAGAAGAGCCAGCTTCTCCTCTTCCATGTCTTGAGTAAGTTCTTCACCGTGACGGATCTGCAGACCGTTAGCAACCCGATGAGGACACTCGCCGGAGACTGGGGGCTGAACTTCACCGGCCAACCGAATTCTAACCAAGTCAATGTATCCACAGGCGTGGTTACGGTGGAGATCAACAATAAGCTCAGGGAGAAATCTCCGTTGGGTGTTTACGTAGTGGATCAAGTTTTGTTGCCTGACGCTCTTTTTGGGAAACACGCCGGCGTACCGCCTCCAAGAGCTCCAGGTCCAAGGGCCGATAATTCTCCTGACGAGGGAAACCCGCCGGAATCTGACGCCGCCAATCCGCCGTCGGATGAGACGGATGGTGGTGTGAGGAACGGCGTCGGATTGGGATTGGTTTTGGGATTTGGTTTGATTGCCATTAGCCTTCTTTTTTAAGAGTTTAGAATCATAGGAGTTGATTTGAGGATAAGTGTGTGCTGCCTTGTCAGCATGCTTTGATTTTCGTTTTTCTTTTTCTTGTAATTTTTTCTACCACTCA

Coding sequence (CDS)

ATGGCCTCCACCGCGCTTCCCCTCCTCCTCCTACCCTTTGTTCTGTTCTCTCAAACTCTCGCCCAAGCTCCGATCAACATAACCGGCATTCTGGCCGAAGGCGGCCAATTCAGCACCTTCCTTCGCCTCCTCGGCGAAAGCAACCTGATCTCTCAGCTCGAGAATCAGCTCGACAACTCGCATGAGGGCATGACCATTCTTGCTCCCTCTGATAATGGCTTCAACGCCCTTAAATCCGGCACCCTCAACAGCCTCAACGACCAGCAGAAGAGCCAGCTTCTCCTCTTCCATGTCTTGAGTAAGTTCTTCACCGTGACGGATCTGCAGACCGTTAGCAACCCGATGAGGACACTCGCCGGAGACTGGGGGCTGAACTTCACCGGCCAACCGAATTCTAACCAAGTCAATGTATCCACAGGCGTGGTTACGGTGGAGATCAACAATAAGCTCAGGGAGAAATCTCCGTTGGGTGTTTACGTAGTGGATCAAGTTTTGTTGCCTGACGCTCTTTTTGGGAAACACGCCGGCGTACCGCCTCCAAGAGCTCCAGGTCCAAGGGCCGATAATTCTCCTGACGAGGGAAACCCGCCGGAATCTGACGCCGCCAATCCGCCGTCGGATGAGACGGATGGTGGTGTGAGGAACGGCGTCGGATTGGGATTGGTTTTGGGATTTGGTTTGATTGCCATTAGCCTTCTTTTTTAA

Protein sequence

MASTALPLLLLPFVLFSQTLAQAPINITGILAEGGQFSTFLRLLGESNLISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDLQTVSNPMRTLAGDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQVLLPDALFGKHAGVPPPRAPGPRADNSPDEGNPPESDAANPPSDETDGGVRNGVGLGLVLGFGLIAISLLF

Homology

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BLAST of CmaCh19G008950 vs. Swiss-Prot
Match: FLA6_ARATH (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2)

HSP 1 Score: 176.0 bits (445), Expect = 4.7e-43
Identity = 102/221 (46.15%), Postives = 142/221 (64.25%), Query Frame = 1


Query: 19  TLAQAPINITGILAEGGQFSTFLRLLGESNLISQLENQLDNSHEGMTILAPSDNGFNALK 78
           T  ++PIN+T IL  G QF+T ++LL  + +  Q+  QL++S +GMTI AP+DN FN LK
Sbjct: 31  TTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLK 90

Query: 79  SGTLNSLNDQQKSQLLLFHVLSKFFTVTDLQTVSNPMRTLA-----GDWGLNFTGQPNSN 138
            GTLNSL  QQ+ QL+L+H++ K+++++DL   SNP+RT A     G +GLNFTGQ  SN
Sbjct: 91  PGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSN 150

Query: 139 QVNVSTGVVTVEINNKLREKSPLGVYVVDQVLLPDALFGKHAGVPPPRAPGPRADNSPDE 198
           QVNVSTGVV   INN LR++ PL VYVVD VLLP+ LFG      P  AP P++  S  +
Sbjct: 151 QVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFG--TKTTPTGAPAPKSSTSSSD 210

Query: 199 GNPPESDAANPPSDETDGGVRNGVGLGLVLGFGLIAISLLF 235
            + P +D       ++ G       LG+V+ F L   S+++
Sbjct: 211 ADSPAAD----DEHKSAGSSVKRTSLGIVVSFALFCCSVIY 245

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BLAST of CmaCh19G008950 vs. Swiss-Prot
Match: FLA13_ARATH (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.4e-42
Identity = 117/252 (46.43%), Postives = 152/252 (60.32%), Query Frame = 1


Query: 1   MASTALPLLLLPFVLFSQTLAQ----------APINITGILAEGGQFSTFLRLLGESNLI 60
           MA+T L LLLL  V  S  +             PINIT IL +GGQF T +RLL  + + 
Sbjct: 1   MATTPLLLLLLTAVFLSTEITAQRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIG 60

Query: 61  SQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDLQT 120
           +Q+  Q+++S EGMT+LAP+DN F  LK GTLN L+   + +L+L+HV  KF+T+ DL +
Sbjct: 61  NQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLS 120

Query: 121 VSNPMRTLA------GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQV 180
           VSNP+RT A      G +GLNFTGQ   NQVNVSTGVV   ++  LR++ PL VYVVD V
Sbjct: 121 VSNPVRTQASGRDVGGVYGLNFTGQ--GNQVNVSTGVVETRLSTSLRQERPLAVYVVDMV 180

Query: 181 LLPDALFGKHAGVPPPRAPGPRADNSPDEGNPPESD--AANPPSDETDGGVRNGVGLGLV 235
           LLP+ +FG+      P AP P++  SPD  +  ES   AA P   E  G      GLG  
Sbjct: 181 LLPEEMFGERK--ISPMAPPPKS-KSPDVSDDSESSKKAAAPSESEKSGSGEMNTGLG-- 240

[Close]

BLAST of CmaCh19G008950 vs. Swiss-Prot
Match: FLA9_ARATH (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.2e-40
Identity = 112/252 (44.44%), Postives = 157/252 (62.30%), Query Frame = 1


Query: 1   MASTAL---PLLLLPFVLFS-----QTLAQAP-----INITGILAEGGQFSTFLRLLGES 60
           MA+T L   PLLL+  VL +     Q  A AP     IN+T IL +GGQF+TF+ LL  +
Sbjct: 1   MATTRLTLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNIT 60

Query: 61  NLISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTD 120
            + SQ+  Q+++S EGMT+ AP+DN F  LK GTLN L+   + +L+L+HV  K++++ D
Sbjct: 61  QVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDD 120

Query: 121 LQTVSNPMRTLA-----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVD 180
           L +VSNP+RT A     G +GLNFTGQ  +NQ+NVSTG V   I+N LR++ PL VYVVD
Sbjct: 121 LLSVSNPVRTQASGRDNGVYGLNFTGQ--TNQINVSTGYVETRISNSLRQQRPLAVYVVD 180

Query: 181 QVLLPDALFGKHAGVPPPRAPGPRADNSPDEGNPPESDAANPPSDETDGGVRNGVGLGLV 235
            VLLP  +FG+H     P AP P++ +     +   +  A  PSD++  G +  VGLG  
Sbjct: 181 MVLLPGEMFGEHK--LSPIAPAPKSKSGGVTDDSGSTKKAASPSDKSGSGEKK-VGLGFG 240

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BLAST of CmaCh19G008950 vs. Swiss-Prot
Match: FLA11_ARATH (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 3.6e-35
Identity = 100/226 (44.25%), Postives = 133/226 (58.85%), Query Frame = 1


Query: 9   LLLPFVLFSQTLAQAPI-------NITGILAEGGQFSTFLRLLGESNLISQLENQLDNSH 68
           L + F++ + T  QAP        NIT IL + GQF+ F+RLL  +    Q+  QL++S 
Sbjct: 12  LFIFFLVIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSS 71

Query: 69  E-GMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDLQTVSNPMRTLAG 128
             G+T+ AP+DN FN+LKSGTLNSL+DQQK QL+ FHVL    T+   QTVSNP+RT AG
Sbjct: 72  SNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAG 131

Query: 129 D-----WGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQVLLPDALFGKHA 188
           D     + LN T   + NQVN++TGVV+  + N +     L VY VDQVLLP A+FG  +
Sbjct: 132 DGQNGKFPLNITS--SGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG--S 191

Query: 189 GVPPPRAPGPRADNSPDEGNPPESDAANPPSDETDGGVRNGVGLGL 222
            V P  AP P    S  +G+    D     +D +D   R G G G+
Sbjct: 192 SVAP--APAPEKGGSVSKGSASGGDDGGDSTDSSD-AERTGFGFGI 230

[Close]

BLAST of CmaCh19G008950 vs. Swiss-Prot
Match: FLA12_ARATH (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 77/189 (40.74%), Postives = 115/189 (60.85%), Query Frame = 1


Query: 24  PINITGILAEGGQFSTFLRLLGESNLISQLENQLDNSHEGMTILAPSDNGFNALKSGTLN 83
           P N+T IL + GQF+ F+RLL  + + +QL  QL+NS  G+TI APSD+ F  LK+GTLN
Sbjct: 37  PTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLN 96

Query: 84  SLNDQQKSQLLLFHVLSKFFTVTDLQTVSNPMRTLAGD-----WGLNFTGQPNSNQVNVS 143
           SL D+Q+ +L+ FHV+  + + ++ QT+SNP+RT AGD     + LN T   + N VN++
Sbjct: 97  SLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVT--TSGNTVNIT 156

Query: 144 TGVVTVEINNKLREKSPLGVYVVDQVLLPDALFGKHAGVPPPRAPGPRADNSPDEGNPPE 203
           +GV    ++  +     L VY VD+VLLP  +F      PP  AP P    S  + +  +
Sbjct: 157 SGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFDPR---PPAPAPAPSVSKSKKKKDDSD 216

Query: 204 SDAANPPSD 208
           S + + P+D
Sbjct: 217 SSSDDSPAD 220

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BLAST of CmaCh19G008950 vs. TrEMBL
Match: A0A0A0K1Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G039260 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.7e-79
Identity = 163/245 (66.53%), Postives = 196/245 (80.00%), Query Frame = 1


Query: 1   MASTALPLLLLPFVLFSQTLAQAP----------INITGILAEGGQFSTFLRLLGESNLI 60
           MAS AL LLLLPF LF QTLAQ P          IN+TGIL+EGGQFSTF+RLL ES LI
Sbjct: 1   MASAALLLLLLPFALFCQTLAQTPAAPGPSPPGPINLTGILSEGGQFSTFIRLLNESRLI 60

Query: 61  SQLENQLDNSHEG-MTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDLQ 120
           +QL+NQL+NS  G +TILAP+DNGFN+L+ G LN+L+DQQKSQLLL+HVL KF+T+ +LQ
Sbjct: 61  TQLDNQLNNSQGGGLTILAPTDNGFNSLRPGALNALDDQQKSQLLLYHVLPKFYTLIELQ 120

Query: 121 TVSNPMRTLAGDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQVLLPDA 180
           TVSNP+RT AGDWGLNFTGQ NSNQVNVSTG++T  INNKLRE+SPL ++VVDQVLLPDA
Sbjct: 121 TVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIITAPINNKLREQSPLSIFVVDQVLLPDA 180

Query: 181 LFGKHAGVPPPRAPGPRADNSPDEG-NPPESDAANPPSDETDGGVRNGVGLGLVLGFGLI 234
           LFG H    PP+AP P  D +P +G  PP+SDAA PP+++     +NGVGLGL+L FGLI
Sbjct: 181 LFGNHTAA-PPKAPAPGTDKAPVDGETPPKSDAAKPPANDKSAVTKNGVGLGLILSFGLI 240

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BLAST of CmaCh19G008950 vs. TrEMBL
Match: W9QUZ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010536 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 2.4e-46
Identity = 121/247 (48.99%), Postives = 163/247 (65.99%), Query Frame = 1


Query: 1   MASTA--LPLLLLPFVLFS-QTLAQ---------APINITGILAEGGQFSTFLRLLGESN 60
           MAST   + L L PF+L S QTLA           P+N+T IL +GGQ++T LRLL E+ 
Sbjct: 1   MASTLSLILLTLTPFLLLSHQTLADDQEAPAPSSGPVNLTAILVKGGQYTTLLRLLSETQ 60

Query: 61  LISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDL 120
           + +Q+ENQL++S EGMT+ AP+DN FN LK+GTLN L+ + + QL+L+HVL K++++ +L
Sbjct: 61  VDNQIENQLNSSKEGMTVFAPTDNAFNNLKAGTLNGLSREDQVQLILYHVLPKYYSLENL 120

Query: 121 QTVSNPMRTLAGDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQVLLPD 180
           QTVSNP+RT + + GLNFTGQ   +QVNVSTG+V  ++NN LRE+ PL VY VD VLLP+
Sbjct: 121 QTVSNPVRTQSSNDGLNFTGQ--GHQVNVSTGIVETQVNNALREEFPLAVYQVDAVLLPE 180

Query: 181 ALFGKH--AGVPPPRAPGPRADNSPDEGNPPESDAANPPSDETDGGVRNGVGLGLVLGFG 234
            LFG    A  PPP    P AD++ D+       AA    D T    +  VGLGLV G  
Sbjct: 181 GLFGAKAPASAPPPAKSTP-ADSASDKAK--TKAAAPSAKDSTGDSNKRNVGLGLVAGLV 240

[Close]

BLAST of CmaCh19G008950 vs. TrEMBL
Match: U5FW74_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s12490g PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 9.3e-46
Identity = 123/249 (49.40%), Postives = 159/249 (63.86%), Query Frame = 1


Query: 1   MASTALPLLLLPFVLFSQTLAQA------------PINITGILAEGGQFSTFLRLLGESN 60
           MA+T L   LL  +  S   AQA            P+N T +L +GGQF+T +RLL  + 
Sbjct: 1   MATTPLSFFLLSLLSLSLN-AQAQTPTAPAPTPSGPVNFTAVLVKGGQFATLIRLLNNTQ 60

Query: 61  LISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDL 120
            ++Q+ENQL++S EGMTI AP+DN FN LK+G LN LN Q++ QLL +H L KF+T+++L
Sbjct: 61  TLNQIENQLNSSSEGMTIFAPTDNAFNNLKAGALNGLNQQEQVQLLQYHTLPKFYTMSNL 120

Query: 121 QTVSNPMRTLA----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQV 180
             VSNP+ T A    G WGLNFTGQ  SNQVNVSTG+V V+INN LR+ SPL VY VD+V
Sbjct: 121 LLVSNPVPTQASGQDGVWGLNFTGQ--SNQVNVSTGLVEVQINNALRQDSPLAVYPVDKV 180

Query: 181 LLPDALFGKHAGVPPPRAPGPRADNSPDEGNPPESDAANPPSDETDGGVRNGVGLGLVLG 234
           LLP+ALF    GV PP A  P    +P   +     AA P + +   G RN V LGLV+G
Sbjct: 181 LLPEALF----GVKPPTASPP----APSSKSNSTVAAAEPSTGKNSAGGRN-VALGLVVG 237

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BLAST of CmaCh19G008950 vs. TrEMBL
Match: B9RVS1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1171550 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 116/247 (46.96%), Postives = 161/247 (65.18%), Query Frame = 1


Query: 3   STALPLLLLPFVLFSQTLAQ----------APINITGILAEGGQFSTFLRLLGESNLISQ 62
           +T LPL  L  +L  Q  AQ           P+N+TGIL + GQF+TF+RLL  + + +Q
Sbjct: 4   TTLLPLTALILLLSLQAQAQNPAAPAPAPSGPLNVTGILDKNGQFTTFIRLLTSTQVATQ 63

Query: 63  LENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDLQTVS 122
           LENQL+++ EG T+ AP+DN FN LK+GTLN L+ QQ+ QL+L H+  KF+T+++L  V 
Sbjct: 64  LENQLNSTTEGFTVFAPTDNAFNNLKAGTLNDLSTQQQVQLVLAHITPKFYTLSNLLLVP 123

Query: 123 NPMRTLA-----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQVLLP 182
           NP+RT A     G +GLNFTGQ  +NQVNVSTG+V  +INN +R++ PL +Y VD+VLLP
Sbjct: 124 NPVRTQATGQDGGVFGLNFTGQ--ANQVNVSTGIVETQINNAIRQQFPLALYQVDKVLLP 183

Query: 183 DALFGKHAGVPPPRAPGPRADNSPDEGNPPESDAANPPSDE-TDGGVRNGVGLGLVLGFG 234
           + LFG     PP  +P P A  S    +  ++ A+ P SD+ T GGVR  V LG V+G G
Sbjct: 184 EELFGVK---PPTASPAPPAKTSSGGSSKNDTVASEPSSDKGTSGGVRTNVALGFVIGLG 243

[Close]

BLAST of CmaCh19G008950 vs. TrEMBL
Match: A0A0B2R7J6_GLYSO (Fasciclin-like arabinogalactan protein 9 OS=Glycine soja GN=glysoja_007650 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.6e-45
Identity = 121/251 (48.21%), Postives = 156/251 (62.15%), Query Frame = 1


Query: 1   MASTALP----LLLLPFVLFSQTLAQAP-------INITGILAEGGQFSTFLRLLGESNL 60
           MAST  P    LL L   L +Q  AQAP       +N+T IL +GGQ++T ++LL ++  
Sbjct: 1   MASTCTPSTLILLTLTTFLIAQAQAQAPAPSPSGAVNLTAILEKGGQYTTLMKLLKDTQQ 60

Query: 61  ISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDLQ 120
           ++Q+E+QL ++ +G T+ AP+DN F +LK G LN L+D QK +L+LFHV  K++T++DL 
Sbjct: 61  LTQIESQLKSNSQGFTLFAPTDNAFQSLKPGALNKLSDDQKVKLILFHVTPKYYTISDLL 120

Query: 121 TVSNPMRTLA----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQVL 180
           TVSNP+RT A    G WGLNFTGQ   NQVN+STGVV  ++NN LREK PL VY VD+VL
Sbjct: 121 TVSNPVRTQATEKEGTWGLNFTGQ-GGNQVNISTGVVQTQLNNPLREKFPLAVYQVDKVL 180

Query: 181 LPDALFGKHAGVPPPRAPGPRADNSPDEGNPPESDAANPPSDE-TDGGVRNG--VGLGLV 234
           LP  LFG         AP P+   S  E  P    A + PSD   D    NG  VG GLV
Sbjct: 181 LPLELFGTTKTRASSAAPSPKGSKSTPE-IPSVGKAGSAPSDSPKDTNAANGMNVGFGLV 240

[Close]

BLAST of CmaCh19G008950 vs. TAIR10
Match: AT2G20520.1 (AT2G20520.1 FASCICLIN-like arabinogalactan 6)

HSP 1 Score: 176.0 bits (445), Expect = 2.7e-44
Identity = 102/221 (46.15%), Postives = 142/221 (64.25%), Query Frame = 1


Query: 19  TLAQAPINITGILAEGGQFSTFLRLLGESNLISQLENQLDNSHEGMTILAPSDNGFNALK 78
           T  ++PIN+T IL  G QF+T ++LL  + +  Q+  QL++S +GMTI AP+DN FN LK
Sbjct: 31  TTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLK 90

Query: 79  SGTLNSLNDQQKSQLLLFHVLSKFFTVTDLQTVSNPMRTLA-----GDWGLNFTGQPNSN 138
            GTLNSL  QQ+ QL+L+H++ K+++++DL   SNP+RT A     G +GLNFTGQ  SN
Sbjct: 91  PGTLNSLTYQQQIQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSN 150

Query: 139 QVNVSTGVVTVEINNKLREKSPLGVYVVDQVLLPDALFGKHAGVPPPRAPGPRADNSPDE 198
           QVNVSTGVV   INN LR++ PL VYVVD VLLP+ LFG      P  AP P++  S  +
Sbjct: 151 QVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFG--TKTTPTGAPAPKSSTSSSD 210

Query: 199 GNPPESDAANPPSDETDGGVRNGVGLGLVLGFGLIAISLLF 235
            + P +D       ++ G       LG+V+ F L   S+++
Sbjct: 211 ADSPAAD----DEHKSAGSSVKRTSLGIVVSFALFCCSVIY 245

[Close]

BLAST of CmaCh19G008950 vs. TAIR10
Match: AT5G44130.1 (AT5G44130.1 FASCICLIN-like arabinogalactan protein 13 precursor)

HSP 1 Score: 173.7 bits (439), Expect = 1.3e-43
Identity = 117/252 (46.43%), Postives = 152/252 (60.32%), Query Frame = 1


Query: 1   MASTALPLLLLPFVLFSQTLAQ----------APINITGILAEGGQFSTFLRLLGESNLI 60
           MA+T L LLLL  V  S  +             PINIT IL +GGQF T +RLL  + + 
Sbjct: 1   MATTPLLLLLLTAVFLSTEITAQRAAPAPGPAGPINITAILEKGGQFVTLIRLLNTTQIG 60

Query: 61  SQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDLQT 120
           +Q+  Q+++S EGMT+LAP+DN F  LK GTLN L+   + +L+L+HV  KF+T+ DL +
Sbjct: 61  NQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDLLS 120

Query: 121 VSNPMRTLA------GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQV 180
           VSNP+RT A      G +GLNFTGQ   NQVNVSTGVV   ++  LR++ PL VYVVD V
Sbjct: 121 VSNPVRTQASGRDVGGVYGLNFTGQ--GNQVNVSTGVVETRLSTSLRQERPLAVYVVDMV 180

Query: 181 LLPDALFGKHAGVPPPRAPGPRADNSPDEGNPPESD--AANPPSDETDGGVRNGVGLGLV 235
           LLP+ +FG+      P AP P++  SPD  +  ES   AA P   E  G      GLG  
Sbjct: 181 LLPEEMFGERK--ISPMAPPPKS-KSPDVSDDSESSKKAAAPSESEKSGSGEMNTGLG-- 240

[Close]

BLAST of CmaCh19G008950 vs. TAIR10
Match: AT1G03870.1 (AT1G03870.1 FASCICLIN-like arabinoogalactan 9)

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 112/252 (44.44%), Postives = 157/252 (62.30%), Query Frame = 1


Query: 1   MASTAL---PLLLLPFVLFS-----QTLAQAP-----INITGILAEGGQFSTFLRLLGES 60
           MA+T L   PLLL+  VL +     Q  A AP     IN+T IL +GGQF+TF+ LL  +
Sbjct: 1   MATTRLTLAPLLLIAAVLLATKATAQPAAPAPEPAGPINLTAILEKGGQFTTFIHLLNIT 60

Query: 61  NLISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTD 120
            + SQ+  Q+++S EGMT+ AP+DN F  LK GTLN L+   + +L+L+HV  K++++ D
Sbjct: 61  QVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDD 120

Query: 121 LQTVSNPMRTLA-----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVD 180
           L +VSNP+RT A     G +GLNFTGQ  +NQ+NVSTG V   I+N LR++ PL VYVVD
Sbjct: 121 LLSVSNPVRTQASGRDNGVYGLNFTGQ--TNQINVSTGYVETRISNSLRQQRPLAVYVVD 180

Query: 181 QVLLPDALFGKHAGVPPPRAPGPRADNSPDEGNPPESDAANPPSDETDGGVRNGVGLGLV 235
            VLLP  +FG+H     P AP P++ +     +   +  A  PSD++  G +  VGLG  
Sbjct: 181 MVLLPGEMFGEHK--LSPIAPAPKSKSGGVTDDSGSTKKAASPSDKSGSGEKK-VGLGFG 240

[Close]

BLAST of CmaCh19G008950 vs. TAIR10
Match: AT5G03170.1 (AT5G03170.1 FASCICLIN-like arabinogalactan-protein 11)

HSP 1 Score: 149.8 bits (377), Expect = 2.1e-36
Identity = 100/226 (44.25%), Postives = 133/226 (58.85%), Query Frame = 1


Query: 9   LLLPFVLFSQTLAQAPI-------NITGILAEGGQFSTFLRLLGESNLISQLENQLDNSH 68
           L + F++ + T  QAP        NIT IL + GQF+ F+RLL  +    Q+  QL++S 
Sbjct: 12  LFIFFLVIATTYGQAPAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSS 71

Query: 69  E-GMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDLQTVSNPMRTLAG 128
             G+T+ AP+DN FN+LKSGTLNSL+DQQK QL+ FHVL    T+   QTVSNP+RT AG
Sbjct: 72  SNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRTQAG 131

Query: 129 D-----WGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQVLLPDALFGKHA 188
           D     + LN T   + NQVN++TGVV+  + N +     L VY VDQVLLP A+FG  +
Sbjct: 132 DGQNGKFPLNITS--SGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFG--S 191

Query: 189 GVPPPRAPGPRADNSPDEGNPPESDAANPPSDETDGGVRNGVGLGL 222
            V P  AP P    S  +G+    D     +D +D   R G G G+
Sbjct: 192 SVAP--APAPEKGGSVSKGSASGGDDGGDSTDSSD-AERTGFGFGI 230

[Close]

BLAST of CmaCh19G008950 vs. TAIR10
Match: AT5G60490.1 (AT5G60490.1 FASCICLIN-like arabinogalactan-protein 12)

HSP 1 Score: 134.8 bits (338), Expect = 6.8e-32
Identity = 77/189 (40.74%), Postives = 115/189 (60.85%), Query Frame = 1


Query: 24  PINITGILAEGGQFSTFLRLLGESNLISQLENQLDNSHEGMTILAPSDNGFNALKSGTLN 83
           P N+T IL + GQF+ F+RLL  + + +QL  QL+NS  G+TI APSD+ F  LK+GTLN
Sbjct: 37  PTNVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLN 96

Query: 84  SLNDQQKSQLLLFHVLSKFFTVTDLQTVSNPMRTLAGD-----WGLNFTGQPNSNQVNVS 143
           SL D+Q+ +L+ FHV+  + + ++ QT+SNP+RT AGD     + LN T   + N VN++
Sbjct: 97  SLTDEQQVELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVT--TSGNTVNIT 156

Query: 144 TGVVTVEINNKLREKSPLGVYVVDQVLLPDALFGKHAGVPPPRAPGPRADNSPDEGNPPE 203
           +GV    ++  +     L VY VD+VLLP  +F      PP  AP P    S  + +  +
Sbjct: 157 SGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQVFDPR---PPAPAPAPSVSKSKKKKDDSD 216

Query: 204 SDAANPPSD 208
           S + + P+D
Sbjct: 217 SSSDDSPAD 220

[Close]

BLAST of CmaCh19G008950 vs. NCBI nr
Match: gi|659110934|ref|XP_008455488.1| (PREDICTED: fasciclin-like arabinogalactan protein 6 [Cucumis melo])

HSP 1 Score: 314.7 bits (805), Expect = 1.4e-82
Identity = 171/246 (69.51%), Postives = 202/246 (82.11%), Query Frame = 1


Query: 1   MASTALPLLLL-PFVLFSQTLAQAP----------INITGILAEGGQFSTFLRLLGESNL 60
           MAS AL LLLL PF LFSQTLAQ P          IN+TGIL++GGQFSTF+RLL +S L
Sbjct: 1   MASPALLLLLLLPFALFSQTLAQTPAAPAPSPPGPINLTGILSQGGQFSTFIRLLNQSRL 60

Query: 61  ISQLENQLDNSH-EGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDL 120
           I QL+NQL+NS  EG+TILAP+DNGFNAL+SG LNSL+DQQKSQLLL+HVL KF+T+T+L
Sbjct: 61  IIQLDNQLNNSQGEGLTILAPTDNGFNALESGALNSLDDQQKSQLLLYHVLPKFYTLTEL 120

Query: 121 QTVSNPMRTLAGDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQVLLPD 180
           QT+SNP+RT AGDWGLNFTGQ NSNQVNVSTGVVTV INNKLRE+SPL V+VVD+VLLP+
Sbjct: 121 QTISNPVRTQAGDWGLNFTGQANSNQVNVSTGVVTVPINNKLREQSPLSVFVVDKVLLPE 180

Query: 181 ALFGKHAGVPPPRAPGPRADNSPDEG-NPPESDAANPPSDETDGGVRNGVGLGLVLGFGL 234
           ALFG H   PPP+AP P AD +P +G  PP+SDAA PP+++     RNGVGLGL+L FGL
Sbjct: 181 ALFGNHTAAPPPKAPAPGADKAPVDGETPPKSDAAKPPANDKGAAARNGVGLGLILSFGL 240

[Close]

BLAST of CmaCh19G008950 vs. NCBI nr
Match: gi|449453549|ref|XP_004144519.1| (PREDICTED: fasciclin-like arabinogalactan protein 13 [Cucumis sativus])

HSP 1 Score: 302.8 bits (774), Expect = 5.4e-79
Identity = 163/245 (66.53%), Postives = 196/245 (80.00%), Query Frame = 1


Query: 1   MASTALPLLLLPFVLFSQTLAQAP----------INITGILAEGGQFSTFLRLLGESNLI 60
           MAS AL LLLLPF LF QTLAQ P          IN+TGIL+EGGQFSTF+RLL ES LI
Sbjct: 1   MASAALLLLLLPFALFCQTLAQTPAAPGPSPPGPINLTGILSEGGQFSTFIRLLNESRLI 60

Query: 61  SQLENQLDNSHEG-MTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDLQ 120
           +QL+NQL+NS  G +TILAP+DNGFN+L+ G LN+L+DQQKSQLLL+HVL KF+T+ +LQ
Sbjct: 61  TQLDNQLNNSQGGGLTILAPTDNGFNSLRPGALNALDDQQKSQLLLYHVLPKFYTLIELQ 120

Query: 121 TVSNPMRTLAGDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQVLLPDA 180
           TVSNP+RT AGDWGLNFTGQ NSNQVNVSTG++T  INNKLRE+SPL ++VVDQVLLPDA
Sbjct: 121 TVSNPVRTQAGDWGLNFTGQANSNQVNVSTGIITAPINNKLREQSPLSIFVVDQVLLPDA 180

Query: 181 LFGKHAGVPPPRAPGPRADNSPDEG-NPPESDAANPPSDETDGGVRNGVGLGLVLGFGLI 234
           LFG H    PP+AP P  D +P +G  PP+SDAA PP+++     +NGVGLGL+L FGLI
Sbjct: 181 LFGNHTAA-PPKAPAPGTDKAPVDGETPPKSDAAKPPANDKSAVTKNGVGLGLILSFGLI 240

[Close]

BLAST of CmaCh19G008950 vs. NCBI nr
Match: gi|703090027|ref|XP_010093970.1| (hypothetical protein L484_010536 [Morus notabilis])

HSP 1 Score: 193.7 bits (491), Expect = 3.5e-46
Identity = 121/247 (48.99%), Postives = 163/247 (65.99%), Query Frame = 1


Query: 1   MASTA--LPLLLLPFVLFS-QTLAQ---------APINITGILAEGGQFSTFLRLLGESN 60
           MAST   + L L PF+L S QTLA           P+N+T IL +GGQ++T LRLL E+ 
Sbjct: 1   MASTLSLILLTLTPFLLLSHQTLADDQEAPAPSSGPVNLTAILVKGGQYTTLLRLLSETQ 60

Query: 61  LISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDL 120
           + +Q+ENQL++S EGMT+ AP+DN FN LK+GTLN L+ + + QL+L+HVL K++++ +L
Sbjct: 61  VDNQIENQLNSSKEGMTVFAPTDNAFNNLKAGTLNGLSREDQVQLILYHVLPKYYSLENL 120

Query: 121 QTVSNPMRTLAGDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQVLLPD 180
           QTVSNP+RT + + GLNFTGQ   +QVNVSTG+V  ++NN LRE+ PL VY VD VLLP+
Sbjct: 121 QTVSNPVRTQSSNDGLNFTGQ--GHQVNVSTGIVETQVNNALREEFPLAVYQVDAVLLPE 180

Query: 181 ALFGKH--AGVPPPRAPGPRADNSPDEGNPPESDAANPPSDETDGGVRNGVGLGLVLGFG 234
            LFG    A  PPP    P AD++ D+       AA    D T    +  VGLGLV G  
Sbjct: 181 GLFGAKAPASAPPPAKSTP-ADSASDKAK--TKAAAPSAKDSTGDSNKRNVGLGLVAGLV 240

[Close]

BLAST of CmaCh19G008950 vs. NCBI nr
Match: gi|566200927|ref|XP_006376379.1| (hypothetical protein POPTR_0013s12490g [Populus trichocarpa])

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45
Identity = 123/249 (49.40%), Postives = 159/249 (63.86%), Query Frame = 1


Query: 1   MASTALPLLLLPFVLFSQTLAQA------------PINITGILAEGGQFSTFLRLLGESN 60
           MA+T L   LL  +  S   AQA            P+N T +L +GGQF+T +RLL  + 
Sbjct: 1   MATTPLSFFLLSLLSLSLN-AQAQTPTAPAPTPSGPVNFTAVLVKGGQFATLIRLLNNTQ 60

Query: 61  LISQLENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDL 120
            ++Q+ENQL++S EGMTI AP+DN FN LK+G LN LN Q++ QLL +H L KF+T+++L
Sbjct: 61  TLNQIENQLNSSSEGMTIFAPTDNAFNNLKAGALNGLNQQEQVQLLQYHTLPKFYTMSNL 120

Query: 121 QTVSNPMRTLA----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQV 180
             VSNP+ T A    G WGLNFTGQ  SNQVNVSTG+V V+INN LR+ SPL VY VD+V
Sbjct: 121 LLVSNPVPTQASGQDGVWGLNFTGQ--SNQVNVSTGLVEVQINNALRQDSPLAVYPVDKV 180

Query: 181 LLPDALFGKHAGVPPPRAPGPRADNSPDEGNPPESDAANPPSDETDGGVRNGVGLGLVLG 234
           LLP+ALF    GV PP A  P    +P   +     AA P + +   G RN V LGLV+G
Sbjct: 181 LLPEALF----GVKPPTASPP----APSSKSNSTVAAAEPSTGKNSAGGRN-VALGLVVG 237

[Close]

BLAST of CmaCh19G008950 vs. NCBI nr
Match: gi|255553599|ref|XP_002517840.1| (PREDICTED: fasciclin-like arabinogalactan protein 6 [Ricinus communis])

HSP 1 Score: 191.0 bits (484), Expect = 2.3e-45
Identity = 116/247 (46.96%), Postives = 161/247 (65.18%), Query Frame = 1


Query: 3   STALPLLLLPFVLFSQTLAQ----------APINITGILAEGGQFSTFLRLLGESNLISQ 62
           +T LPL  L  +L  Q  AQ           P+N+TGIL + GQF+TF+RLL  + + +Q
Sbjct: 4   TTLLPLTALILLLSLQAQAQNPAAPAPAPSGPLNVTGILDKNGQFTTFIRLLTSTQVATQ 63

Query: 63  LENQLDNSHEGMTILAPSDNGFNALKSGTLNSLNDQQKSQLLLFHVLSKFFTVTDLQTVS 122
           LENQL+++ EG T+ AP+DN FN LK+GTLN L+ QQ+ QL+L H+  KF+T+++L  V 
Sbjct: 64  LENQLNSTTEGFTVFAPTDNAFNNLKAGTLNDLSTQQQVQLVLAHITPKFYTLSNLLLVP 123

Query: 123 NPMRTLA-----GDWGLNFTGQPNSNQVNVSTGVVTVEINNKLREKSPLGVYVVDQVLLP 182
           NP+RT A     G +GLNFTGQ  +NQVNVSTG+V  +INN +R++ PL +Y VD+VLLP
Sbjct: 124 NPVRTQATGQDGGVFGLNFTGQ--ANQVNVSTGIVETQINNAIRQQFPLALYQVDKVLLP 183

Query: 183 DALFGKHAGVPPPRAPGPRADNSPDEGNPPESDAANPPSDE-TDGGVRNGVGLGLVLGFG 234
           + LFG     PP  +P P A  S    +  ++ A+ P SD+ T GGVR  V LG V+G G
Sbjct: 184 EELFGVK---PPTASPAPPAKTSSGGSSKNDTVASEPSSDKGTSGGVRTNVALGFVIGLG 243

The following BLAST results are available for this feature:

BLAST of CmaCh19G008950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FLA6_ARATH	4.7e-43	46.15	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV...	[more]
FLA13_ARATH	2.4e-42	46.43	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 ...	[more]
FLA9_ARATH	2.2e-40	44.44	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV...	[more]
FLA11_ARATH	3.6e-35	44.25	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 ...	[more]
FLA12_ARATH	1.2e-30	40.74	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 ...	[more]

BLAST of CmaCh19G008950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1Z9_CUCSA	3.7e-79	66.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G039260 PE=4 SV=1	[more]
W9QUZ8_9ROSA	2.4e-46	48.99	Uncharacterized protein OS=Morus notabilis GN=L484_010536 PE=4 SV=1	[more]
U5FW74_POPTR	9.3e-46	49.40	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s12490g PE=4 SV=1	[more]
B9RVS1_RICCO	1.6e-45	46.96	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1171550 PE=4 SV=1	[more]
A0A0B2R7J6_GLYSO	4.6e-45	48.21	Fasciclin-like arabinogalactan protein 9 OS=Glycine soja GN=glysoja_007650 PE=4 ...	[more]

BLAST of CmaCh19G008950 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20520.1	2.7e-44	46.15	FASCICLIN-like arabinogalactan 6	[more]
AT5G44130.1	1.3e-43	46.43	FASCICLIN-like arabinogalactan protein 13 precursor	[more]
AT1G03870.1	1.2e-41	44.44	FASCICLIN-like arabinoogalactan 9	[more]
AT5G03170.1	2.1e-36	44.25	FASCICLIN-like arabinogalactan-protein 11	[more]
AT5G60490.1	6.8e-32	40.74	FASCICLIN-like arabinogalactan-protein 12	[more]

BLAST of CmaCh19G008950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110934\|ref\|XP_008455488.1\|	1.4e-82	69.51	PREDICTED: fasciclin-like arabinogalactan protein 6 [Cucumis melo]	[more]
gi\|449453549\|ref\|XP_004144519.1\|	5.4e-79	66.53	PREDICTED: fasciclin-like arabinogalactan protein 13 [Cucumis sativus]	[more]
gi\|703090027\|ref\|XP_010093970.1\|	3.5e-46	48.99	hypothetical protein L484_010536 [Morus notabilis]	[more]
gi\|566200927\|ref\|XP_006376379.1\|	1.3e-45	49.40	hypothetical protein POPTR_0013s12490g [Populus trichocarpa]	[more]
gi\|255553599\|ref\|XP_002517840.1\|	2.3e-45	46.96	PREDICTED: fasciclin-like arabinogalactan protein 6 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000782	FAS1_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044699	single-organism process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G008950.1	CmaCh19G008950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	GENE3D	G3DSA:2.30.180.10		coord: 26..167 score: 1.0
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 36..167 score: 9.9
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 65..168 score: 9.1
IPR000782	FAS1 domain	PROFILE	PS50213	FAS1	coord: 24..165 score: 18
IPR000782	FAS1 domain	unknown	SSF82153	FAS1 domain	coord: 19..168 score: 9.55
None	No IPR available	PANTHER	PTHR32077	FAMILY NOT NAMED	coord: 1..234 score: 3.7
None	No IPR available	PANTHER	PTHR32077:SF6	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13-RELATED	coord: 1..234 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G008950	Cucsa.181220	Cucumber (Gy14) v1	cgycmaB0516
CmaCh19G008950	Cla015635	Watermelon (97103) v1	cmawmB503
CmaCh19G008950	Csa7G039260	Cucumber (Chinese Long) v2	cmacuB527
CmaCh19G008950	MELO3C018862	Melon (DHL92) v3.5.1	cmameB461
CmaCh19G008950	ClCG02G002290	Watermelon (Charleston Gray)	cmawcgB460
CmaCh19G008950	CSPI07G03270	Wild cucumber (PI 183967)	cmacpiB533
CmaCh19G008950	CmoCh19G009120	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G008950	CmoCh11G018760	Cucurbita moschata (Rifu)	cmacmoB492
CmaCh19G008950	Lsi11G014010	Bottle gourd (USVL1VR-Ls)	cmalsiB472
CmaCh19G008950	Cp4.1LG15g07270	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G008950	Cp4.1LG04g03710	Cucurbita pepo (Zucchini)	cmacpeB537
CmaCh19G008950	MELO3C018862.2	Melon (DHL92) v3.6.1	cmamedB534
CmaCh19G008950	CsaV3_7G003150	Cucumber (Chinese Long) v3	cmacucB0638
CmaCh19G008950	Cla97C02G028720	Watermelon (97103) v2	cmawmbB531
CmaCh19G008950	Bhi05G001228	Wax gourd	cmawgoB0652
CmaCh19G008950	CsGy7G002910	Cucumber (Gy14) v2	cgybcmaB944
CmaCh19G008950	Carg18041	Silver-seed gourd	carcmaB1474
CmaCh19G008950	Carg04178	Silver-seed gourd	carcmaB0279

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh19G008950	CmaCh11G018020	Cucurbita maxima (Rimu)	cmacmaB148

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G008950	Cucurbita pepo (Zucchini)	cmacpeB525
CmaCh19G008950	Cucurbita pepo (Zucchini)	cmacpeB545
CmaCh19G008950	Cucumber (Gy14) v2	cgybcmaB211
CmaCh19G008950	Cucumber (Chinese Long) v3	cmacucB0606
CmaCh19G008950	Wax gourd	cmawgoB0665
CmaCh19G008950	Cucurbita maxima (Rimu)	cmacmaB443
CmaCh19G008950	Cucurbita maxima (Rimu)	cmacmaB451
CmaCh19G008950	Cucurbita moschata (Rifu)	cmacmoB524
CmaCh19G008950	Wild cucumber (PI 183967)	cmacpiB510
CmaCh19G008950	Cucumber (Chinese Long) v2	cmacuB505
CmaCh19G008950	Melon (DHL92) v3.5.1	cmameB451