CmoCh19G008070 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G008070
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Arabidopsis protein of unknown function (DUF241)
Location	Cmo_Chr19 : 7998117 .. 7998941 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAACCTCTCAGCATGTTCGTTCAAAGAGTGTGCCTGAAAATCCAAACCCAATCATCAGCCAAGTAGATGAGCAGCTGAGTAGATTAAAGGATTCTGAAGCCACTTCTTCTCTTTGCATCAGACTAGGCGCCCTTCAAGATTTGCACGAGTCCGTGGACAAGCTGCTTCTTTTGCCTCACACCCAACAAGCTCTGGTTCAAGTGAGTGACAAGGAAGGGCTGGATGACTTACTAGAAGGCTCTCTCAGGCTTCTGGATTTGTGTGACACAGCCAAGAATGCCTTGTTGCAAACAAGGGAATGCATATATGAATTAGAGATGGTTATGCGTAGAAGGAGAACTGAAATGGGGATTTCTAGTGCAGTTCAGAAGTGTTTAAGTTCAAGGAAGATGATAAAGAAAGCAGTCCATAAAGTGTTGAAAATGGAAAGAAAACAATGTCATAAAGAGAATGGATGTCAGCTAAAAGAGGTTGAAGCAGTCACATACCACAGCATAGTAGCCTTATTGTCCTTCATAGCAGGAGCCAAGTTGCCTGCAAAATGGAGCTGCTGGGCTTCAGTTTCCAAGCTTGTTCAATCCAAAAAAGTGGCCTGCATAAGCGAAGAAACAAGCATAAGTGTTGTAGAAAGGTTGGATTTGGCTTTGAGTTCAATTGCCAATTACAGAACTGACAAGGAATTCCAAGTTCAAGTTGAAGATATGCAGAGCTTGCTCAGGGATTGTGGAGCAAGCGTTAAGGAAGTTCAAGAAGAGCTTGAGGGCCTTTATAGGTTCATAATCAGAACGAGAATATCCCTTCTTAACATCTTCAACCACTAA

mRNA sequence

ATGAGAACCTCTCAGCATGTTCGTTCAAAGAGTGTGCCTGAAAATCCAAACCCAATCATCAGCCAAGTAGATGAGCAGCTGAGTAGATTAAAGGATTCTGAAGCCACTTCTTCTCTTTGCATCAGACTAGGCGCCCTTCAAGATTTGCACGAGTCCGTGGACAAGCTGCTTCTTTTGCCTCACACCCAACAAGCTCTGGTTCAAGTGAGTGACAAGGAAGGGCTGGATGACTTACTAGAAGGCTCTCTCAGGCTTCTGGATTTGTGTGACACAGCCAAGAATGCCTTGTTGCAAACAAGGGAATGCATATATGAATTAGAGATGGTTATGCGTAGAAGGAGAACTGAAATGGGGATTTCTAGTGCAGTTCAGAAGTGTTTAAGTTCAAGGAAGATGATAAAGAAAGCAGTCCATAAAGTGTTGAAAATGGAAAGAAAACAATGTCATAAAGAGAATGGATGTCAGCTAAAAGAGGTTGAAGCAGTCACATACCACAGCATAGTAGCCTTATTGTCCTTCATAGCAGGAGCCAAGTTGCCTGCAAAATGGAGCTGCTGGGCTTCAGTTTCCAAGCTTGTTCAATCCAAAAAAGTGGCCTGCATAAGCGAAGAAACAAGCATAAGTGTTGTAGAAAGGTTGGATTTGGCTTTGAGTTCAATTGCCAATTACAGAACTGACAAGGAATTCCAAGTTCAAGTTGAAGATATGCAGAGCTTGCTCAGGGATTGTGGAGCAAGCGTTAAGGAAGTTCAAGAAGAGCTTGAGGGCCTTTATAGGTTCATAATCAGAACGAGAATATCCCTTCTTAACATCTTCAACCACTAA

Coding sequence (CDS)

ATGAGAACCTCTCAGCATGTTCGTTCAAAGAGTGTGCCTGAAAATCCAAACCCAATCATCAGCCAAGTAGATGAGCAGCTGAGTAGATTAAAGGATTCTGAAGCCACTTCTTCTCTTTGCATCAGACTAGGCGCCCTTCAAGATTTGCACGAGTCCGTGGACAAGCTGCTTCTTTTGCCTCACACCCAACAAGCTCTGGTTCAAGTGAGTGACAAGGAAGGGCTGGATGACTTACTAGAAGGCTCTCTCAGGCTTCTGGATTTGTGTGACACAGCCAAGAATGCCTTGTTGCAAACAAGGGAATGCATATATGAATTAGAGATGGTTATGCGTAGAAGGAGAACTGAAATGGGGATTTCTAGTGCAGTTCAGAAGTGTTTAAGTTCAAGGAAGATGATAAAGAAAGCAGTCCATAAAGTGTTGAAAATGGAAAGAAAACAATGTCATAAAGAGAATGGATGTCAGCTAAAAGAGGTTGAAGCAGTCACATACCACAGCATAGTAGCCTTATTGTCCTTCATAGCAGGAGCCAAGTTGCCTGCAAAATGGAGCTGCTGGGCTTCAGTTTCCAAGCTTGTTCAATCCAAAAAAGTGGCCTGCATAAGCGAAGAAACAAGCATAAGTGTTGTAGAAAGGTTGGATTTGGCTTTGAGTTCAATTGCCAATTACAGAACTGACAAGGAATTCCAAGTTCAAGTTGAAGATATGCAGAGCTTGCTCAGGGATTGTGGAGCAAGCGTTAAGGAAGTTCAAGAAGAGCTTGAGGGCCTTTATAGGTTCATAATCAGAACGAGAATATCCCTTCTTAACATCTTCAACCACTAA

Homology

[Close]

BLAST of CmoCh19G008070 vs. TrEMBL
Match: A0A0A0K1I3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023970 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 2.2e-107
Identity = 212/283 (74.91%), Postives = 251/283 (88.69%), Query Frame = 1


Query: 2   RTSQHVRSKSVPENPNPIISQVDEQLSRLKDSEA----TSSLCIRLGALQDLHESVDKLL 61
           R SQHVRSKSVP NP+PIISQVDEQLSRL+DSEA    +SSLC +L ALQDLH+SVDKLL
Sbjct: 9   RNSQHVRSKSVPSNPHPIISQVDEQLSRLRDSEAISSSSSSLCHKLSALQDLHDSVDKLL 68

Query: 62  LLPHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRTEM 121
           +LP +QQALVQVSDKE LD+LLEGSLRLLDLCDTAK AL+QTREC +E E V+RRRR+++
Sbjct: 69  ILPLSQQALVQVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFESVLRRRRSDI 128

Query: 122 GISSAVQKCLSSRKMIKKAVHKVLK-MERKQCHKENGC-----QLKEVEAVTYHSIVALL 181
           G SS+++KCLSSRK+IKKA+HKVLK ME KQ +K++       Q+KEVEAVTY SIV+LL
Sbjct: 129 GTSSSLKKCLSSRKLIKKAIHKVLKGMESKQTNKDSESFTFVNQIKEVEAVTYQSIVSLL 188

Query: 182 SFIAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDKEFQV 241
            FIAG KLPAKW+CW+SVSKLVQSKKVACISEETSIS+VERLDLALSSI N+++DK+FQ+
Sbjct: 189 FFIAGPKLPAKWNCWSSVSKLVQSKKVACISEETSISIVERLDLALSSITNHQSDKDFQI 248

Query: 242 QVEDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
            V DMQ+LLRDCGAS+K+V+EELEGLYRFII+ R+SLLNIFN+
Sbjct: 249 HVGDMQNLLRDCGASIKKVEEELEGLYRFIIKIRVSLLNIFNY 291

[Close]

BLAST of CmoCh19G008070 vs. TrEMBL
Match: A0A0A0K659_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023950 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.1e-93
Identity = 195/281 (69.40%), Postives = 235/281 (83.63%), Query Frame = 1


Query: 2   RTSQHVRSKSVPENPNPIISQVDEQLSRLK-DSEATSS-LCIRLGALQDLHESVDKLLLL 61
           R SQHVRSKS   NP+PIISQV+EQL RL+ DSEATSS LC RLGALQDL++ VDKLL+L
Sbjct: 9   RNSQHVRSKSENSNPHPIISQVNEQLRRLRPDSEATSSSLCHRLGALQDLYDGVDKLLVL 68

Query: 62  PHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRTEMGI 121
           P++Q ALVQ S++E  DDLLEGSL LLDLCDTAKN LLQTRECI+ELE ++RR+R E+  
Sbjct: 69  PNSQNALVQQSNEEVFDDLLEGSLMLLDLCDTAKNGLLQTRECIHELESILRRKRGEICT 128

Query: 122 SSAVQKCLSSRKMIKKAVHKVLK-MERKQCHKENGCQ-----LKEVEAVTYHSIVALLSF 181
           SS++ K   SRKMIKK + K LK ME +  HK +G       +KEVEA+TYHS+ +LLSF
Sbjct: 129 SSSLHK---SRKMIKKTIQKALKGMEGEPFHKVHGSLTIVNLIKEVEAITYHSLESLLSF 188

Query: 182 IAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQV 241
           IAG KLP+KWSCW+SVS LVQ K+VACISEET ISVVERLDLALSS  N++++KEFQ+Q 
Sbjct: 189 IAGPKLPSKWSCWSSVSMLVQPKRVACISEETDISVVERLDLALSSFTNHQSNKEFQIQD 248

Query: 242 EDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
           EDMQ+LLR+CGAS+KEV+EEL+GLYRFII+TR+SLLNIFN+
Sbjct: 249 EDMQNLLRECGASIKEVEEELDGLYRFIIKTRVSLLNIFNN 286

[Close]

BLAST of CmoCh19G008070 vs. TrEMBL
Match: A0A0A0K2T0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023980 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.3e-67
Identity = 152/285 (53.33%), Postives = 212/285 (74.39%), Query Frame = 1


Query: 2   RTSQHVRSKSVPENPNPIISQVDEQLSRLKD-SEATSS---LCIRLGALQDLHESVDKLL 61
           + S HVRS S+P  P+P I QVDEQL RLK+ S+ATSS   LC +L  LQDLH+S+D++L
Sbjct: 9   KNSHHVRSNSLPSKPHPFIDQVDEQLCRLKEVSKATSSSSELCHKLNDLQDLHDSIDRML 68

Query: 62  LLPHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRR-TE 121
           LL HTQ  LV+ SDK+  +DLLEGS++LLDLCD AK+ALLQ++EC++ELE V+RRRR  E
Sbjct: 69  LLSHTQHILVEESDKKSFNDLLEGSIKLLDLCDIAKDALLQSKECVHELESVLRRRRGGE 128

Query: 122 MGISSAVQKCLSSRKMIKKAVHKVLK-MERKQCHKENG-----CQLKEVEAVTYHSIVAL 181
           M I+S VQK LSSRK+IKK ++K LK +E K C K          LK+ E V Y+ + +L
Sbjct: 129 MFIASEVQKGLSSRKLIKKTINKALKAIETKSCEKSQASSAIVSSLKQAEVVGYNVVKSL 188

Query: 182 LSFIAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDK-EF 241
           LS++AG K  +  S W+ VSKLVQSK+VAC  EET+ + V  +D AL SIA+ +T K +F
Sbjct: 189 LSYLAGPKFSSNSSHWSLVSKLVQSKRVACEVEETNRNEVALVDAALHSIASQKTKKSDF 248

Query: 242 QVQVEDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
           +VQV+++Q+ L+  G+++++++ +LE LYR +I+TR+SLLNI+N+
Sbjct: 249 RVQVDNLQNALKIFGSNIEDLEGDLEALYRHLIKTRVSLLNIYNY 293

[Close]

BLAST of CmoCh19G008070 vs. TrEMBL
Match: A0A0A0K2S2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023930 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.3e-67
Identity = 153/278 (55.04%), Postives = 199/278 (71.58%), Query Frame = 1


Query: 6   HVRSKSVPENPNPIISQVDEQLSRLKDSEATSS---LCIRLGALQDLHESVDKLLLLPHT 65
           HVRS S+P  P+PI++QVDE L RLK SEATSS   LC RL +LQDLH+ +DKLLLLP T
Sbjct: 13  HVRSNSLPSKPHPIVNQVDEHLCRLKSSEATSSTSSLCHRLNSLQDLHDCIDKLLLLPFT 72

Query: 66  QQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRTEMGISSA 125
           QQ LV  SD +  DD LEGSL++L+LCD AK+ALLQT+EC+ ELE V+RRRR E  IS  
Sbjct: 73  QQTLVNESDNKWTDDFLEGSLKVLELCDIAKDALLQTKECVRELESVLRRRRDEAVISRD 132

Query: 126 VQKCLSSRKMIKKAVHKVLKMERKQCHKENG------CQLKEVEAVTYHSIVALLSFIAG 185
           +QKCLSSRKMIKKAV K LK  +  C +++         LKEVEA+T+ +I ++LSFIAG
Sbjct: 133 LQKCLSSRKMIKKAVQKALKGIKSNCSQQSEETSATVSLLKEVEAITFSTIESVLSFIAG 192

Query: 186 AKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQVEDM 245
            KLP++WS    VSKLVQSK+VA   E+   + VE +D  LS+IA++ TDK       ++
Sbjct: 193 PKLPSRWS---FVSKLVQSKRVANKDEDAYENEVEMVDATLSAIASHTTDKSV-----NL 252

Query: 246 QSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
           Q  LR   +S+++++E+LE L R +I+ R+SLLNI NH
Sbjct: 253 QDQLRKIESSIRDLEEDLESLQRHLIKNRVSLLNILNH 282

[Close]

BLAST of CmoCh19G008070 vs. TrEMBL
Match: A0A0A0K0T5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023940 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 3.3e-66
Identity = 149/281 (53.02%), Postives = 198/281 (70.46%), Query Frame = 1


Query: 2   RTSQHVRSKSVPENPNPIISQVDEQLSRLKDSEATSS---LCIRLGALQDLHESVDKLLL 61
           + S H+RS S+P  P+PI+ +V+E L RLK SEA SS   LC RL +LQ LH+S+DKLLL
Sbjct: 9   KKSLHIRSNSLPSRPHPIVVEVEENLCRLKSSEAASSTFSLCYRLNSLQALHDSIDKLLL 68

Query: 62  LPHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRTEMG 121
           LP TQQ LV  S K+  DDLLEGSLRL+DLCD AK+ALLQTRECI+ELE  +RRR +E  
Sbjct: 69  LPSTQQTLVHESGKKWADDLLEGSLRLIDLCDIAKDALLQTRECIHELESDLRRRSSERI 128

Query: 122 ISSAVQKCLSSRKMIKKAVHKVLKMERKQCHKENG-----CQLKEVEAVTYHSIVALLSF 181
           I+S VQKCL SRKMIK+ V K LK  +    K          LKEVEA+TY ++ +++S 
Sbjct: 129 ITSDVQKCLKSRKMIKRTVQKALKGIKISSQKSEESLATVSLLKEVEAITYSTVESVMSN 188

Query: 182 IAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQV 241
           + G KLP+K+S W+ VSKLVQSK+VA   E+ + + VE +   L+SIA++ TDK F    
Sbjct: 189 VVGPKLPSKFSPWSLVSKLVQSKRVASHDEDANANEVEMVGATLNSIASHTTDKSF---- 248

Query: 242 EDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
            ++Q LLR   +S+++ +E+LE LYR +I+ R+SLLNI N+
Sbjct: 249 -NLQDLLRKSESSIQDFEEDLESLYRHLIKNRVSLLNILNN 284

[Close]

BLAST of CmoCh19G008070 vs. TAIR10
Match: AT2G17070.1 (AT2G17070.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 166.4 bits (420), Expect = 2.5e-41
Identity = 111/283 (39.22%), Postives = 178/283 (62.90%), Query Frame = 1


Query: 1   MRTSQHVRSKSVPENPNPIISQVDEQLSRLKDSEATS-----SLCIRLGALQDLHESVDK 60
           M  S HVRS S P  P+P  + VDEQL+RL+ SE TS     S+C RL  LQ+LHES+DK
Sbjct: 1   MAVSFHVRSHSYPSIPHPQAAHVDEQLARLRSSEETSTSSSSSICQRLDNLQELHESLDK 60

Query: 61  LLLLPHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRT 120
           L+ LP TQQAL Q  +K+ ++ LL+GSL++LD+C+ +K+AL Q +E + E++ ++RR+R 
Sbjct: 61  LIRLPVTQQALGQEKNKKDVEQLLDGSLKILDVCNISKDALSQMKEGLMEIQSILRRKRG 120

Query: 121 EMGISSAVQKCLSSRKMIKKAVHKV---LKMERKQCHKENGCQL-KEVEAVTYHSIVALL 180
           +  +S  V+K L+SRK  KK   KV   LK  + + +K+    +  E EAVT     +L 
Sbjct: 121 D--LSGEVKKYLASRKSFKKTFQKVQKSLKAAQAEDNKDKSLAVFGEAEAVTIAMFDSLF 180

Query: 181 SFIAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDKEFQV 240
           S+++G+K  +KWS    VSKL+  KK+ C ++E   + V+         + ++++K   +
Sbjct: 181 SYMSGSKTCSKWSV---VSKLMNKKKITCEAQENEFTKVD---------SEFQSEK--TL 240

Query: 241 QVEDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
           ++ED+Q +L  C   +++ ++ LE L + +I+ R+S+LN F H
Sbjct: 241 KMEDVQ-ILESC---IQDFEDGLESLSKSLIKYRVSILNSFGH 263

[Close]

BLAST of CmoCh19G008070 vs. TAIR10
Match: AT2G17080.1 (AT2G17080.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 164.5 bits (415), Expect = 9.4e-41
Identity = 109/283 (38.52%), Postives = 178/283 (62.90%), Query Frame = 1


Query: 1   MRTSQHVRSKSVPENPNPIISQVDEQLSRLKDSE-----ATSSLCIRLGALQDLHESVDK 60
           M  S HVRS S P   +P  + VDEQL+RL+ SE     ++SS+C RL  LQ+LHES+DK
Sbjct: 1   MAVSFHVRSNSFPSRSHPQAAHVDEQLARLRSSEQASSSSSSSICQRLDNLQELHESLDK 60

Query: 61  LLLLPHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRT 120
           L+  P TQQAL Q  +K+ ++ LL+GSLR+LDLC+ +K+AL + +E + E++ ++RR+R 
Sbjct: 61  LISRPVTQQALSQEHNKKAVEQLLDGSLRILDLCNISKDALSEMKEGLMEIQSILRRKRG 120

Query: 121 EMGISSAVQKCLSSRKMIKKAVHKVLK-MERKQCHKENGCQLK---EVEAVTYHSIVALL 180
           +  +S  V+K L+SRK +KK+  KV K ++  Q    N   L    E EA+T     +LL
Sbjct: 121 D--LSEEVKKYLTSRKSLKKSFQKVQKSLKVTQAEDNNDDTLAVFGEAEAITLSLFDSLL 180

Query: 181 SFIAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDKEFQV 240
           S+++G+K  +KWS    VSKL+  KKV C ++E   + V+         + ++++K   +
Sbjct: 181 SYMSGSKTCSKWSV---VSKLMNKKKVTCEAQENEFTKVD---------SEFQSEK--TL 240

Query: 241 QVEDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
           +++D+Q+L     + ++++++ LE L + +I+ R+S LNI  H
Sbjct: 241 KMDDVQNL----ESCIQDLEDGLESLSKSLIKYRVSFLNILGH 263

[Close]

BLAST of CmoCh19G008070 vs. TAIR10
Match: AT4G35200.1 (AT4G35200.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-35
Identity = 105/282 (37.23%), Postives = 166/282 (58.87%), Query Frame = 1


Query: 1   MRTSQHVRSKSVPENPNPIISQVDEQLSRLK--DSEATSSLCIRLGALQDLHESVDKLLL 60
           M  S HVRS S P   +P  + VDEQL+RL+  DS ++SS+C RL  LQDLH+S++K++ 
Sbjct: 1   MAVSFHVRSNSYPSRQHPQAAHVDEQLTRLRSSDSASSSSICQRLSNLQDLHDSLEKMIR 60

Query: 61  LPHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRTEMG 120
           L  T  AL Q    + ++ LL+GSLR+LDLC+ AK+A+ Q +E + E++ ++RR+  +  
Sbjct: 61  LSVTNLALSQ----DQIEKLLDGSLRILDLCNIAKDAISQMKEGLMEIQSILRRKPGD-- 120

Query: 121 ISSAVQKCLSSRKMIKKAVHKVLKMERKQCHKENGCQLKEV-----EAVTYHSIVALLSF 180
           +S  V+K L SRK +KK++ KV+K   K C  ++      V     EAVT     +L SF
Sbjct: 121 LSGEVKKYLVSRKFLKKSLQKVIK-SLKVCQSKDSTNASLVVFGRAEAVTMALFESLFSF 180

Query: 181 IAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDKEFQ--- 240
           ++G+K   KWS    VSK++   KV C +E    +               R D EFQ   
Sbjct: 181 MSGSKACGKWSL---VSKMMSQNKVTCEAEANEFT---------------RIDSEFQSEK 240

Query: 241 -VQVEDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNI 272
            +Q+ED+Q+L     + ++++++ +E L + +I+ R+S+LNI
Sbjct: 241 SLQMEDVQNL----ESCIQDLEDGIESLSKSLIKYRVSILNI 253

[Close]

BLAST of CmoCh19G008070 vs. TAIR10
Match: AT4G35210.1 (AT4G35210.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 142.5 bits (358), Expect = 3.8e-34
Identity = 99/274 (36.13%), Postives = 164/274 (59.85%), Query Frame = 1


Query: 1   MRTSQHVRSKSVPENPNPIISQVDEQLSRLKDS--EATSSLCIRLGALQDLHESVDKLLL 60
           M  S HVRS S P   +P  + VDEQL+RL+ S   ++SS+C RL  LQDLH+S++K++ 
Sbjct: 1   MAVSFHVRSSSYPSRQHPQAAHVDEQLTRLRSSGTASSSSICQRLSNLQDLHDSLEKMIR 60

Query: 61  LPHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRTEMG 120
           L  T QAL Q    + ++ LL+GS+++LDLC  +K+ L Q +E + E++ ++RR+R +  
Sbjct: 61  LSVTNQALSQ----DQIEKLLDGSIKILDLCSISKDGLSQMKESLKEIQSIVRRKRGD-- 120

Query: 121 ISSAVQKCLSSRKMIKKAVHKVLKMERKQCHKENGCQL-KEVEAVTYHSIVALLSFIAGA 180
           +S+ V+K L+SRK +KK+  KVLK  +   +K +   +  E E VT     +L SF++G+
Sbjct: 121 LSAEVKKYLASRKFLKKSFEKVLKSLKTSQNKNDALAVFGEAETVTIALFESLFSFMSGS 180

Query: 181 KLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQVEDMQ 240
           K   KWS    VSK++   K  C +E    +   R+D+   S        E  +Q+ED+Q
Sbjct: 181 KACGKWSL---VSKMMSQSKGTCEAEANEFT---RVDMEFQS--------EKSLQMEDVQ 240

Query: 241 SLLRDCGASVKEVQEELEGLYRFIIRTRISLLNI 272
           +L       ++++++ +  L + +I+ R+S+LNI
Sbjct: 241 NL----EICIQDLEDGIGSLSKSLIKYRVSILNI 250

[Close]

BLAST of CmoCh19G008070 vs. TAIR10
Match: AT4G35690.1 (AT4G35690.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 85.9 bits (211), Expect = 4.3e-17
Identity = 79/298 (26.51%), Postives = 151/298 (50.67%), Query Frame = 1


Query: 1   MRTSQHVRSKSVPENPNPIISQVDEQLSRLKD----SEATSSLCIRLGALQDLHESVDKL 60
           M     +RS S+P + +P  + ++E L+++K     + ++ S+ + L  L++L+   +  
Sbjct: 4   MLVKNQLRSISLPSSSHPSTTGIEESLNKVKTINTMTGSSESVLMGLEGLEELYNCTEDF 63

Query: 61  LLLPHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRTE 120
           L +  TQ+ +      E ++++L+GSLRL+D+C  +++ +++T+E +  ++  +RR++  
Sbjct: 64  LKMGSTQRVMSSSDGSEFMEEMLDGSLRLMDICSVSRDLMVETQEHVRGVQSCVRRKKVV 123

Query: 121 MG---ISSAVQKCLSSRKMIKKAVHKVLKMER-------KQCHKENGCQ----------L 180
            G   +  AV   +  RK ++K   ++L   +             NG Q          +
Sbjct: 124 GGEDQLDVAVAGYVGFRKNMRKEAKRLLGSLKNIDGGLSSSSSVNNGEQEEHLVVVVDAM 183

Query: 181 KEVEAVTYHSIVALLSFIAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLA 240
           ++V +V+   + + L F++G +     S  ASV K    KKV  + EET  + +E LDL 
Sbjct: 184 RQVVSVSVAVLRSFLEFLSGRRQSNIKSKLASVLK---KKKVHHV-EETK-NELENLDLE 243

Query: 241 LSSIANYRTDKEFQVQVEDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
           +    N            D+Q  L +   S+   +++LEGL+R +IRTR SLLNI +H
Sbjct: 244 IFCSRN------------DLQKKLEEVEMSIDGFEKKLEGLFRRLIRTRASLLNIISH 284

[Close]

BLAST of CmoCh19G008070 vs. NCBI nr
Match: gi|449454404|ref|XP_004144945.1| (PREDICTED: uncharacterized protein LOC101212326 [Cucumis sativus])

HSP 1 Score: 396.7 bits (1018), Expect = 3.2e-107
Identity = 212/283 (74.91%), Postives = 251/283 (88.69%), Query Frame = 1


Query: 2   RTSQHVRSKSVPENPNPIISQVDEQLSRLKDSEA----TSSLCIRLGALQDLHESVDKLL 61
           R SQHVRSKSVP NP+PIISQVDEQLSRL+DSEA    +SSLC +L ALQDLH+SVDKLL
Sbjct: 9   RNSQHVRSKSVPSNPHPIISQVDEQLSRLRDSEAISSSSSSLCHKLSALQDLHDSVDKLL 68

Query: 62  LLPHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRTEM 121
           +LP +QQALVQVSDKE LD+LLEGSLRLLDLCDTAK AL+QTREC +E E V+RRRR+++
Sbjct: 69  ILPLSQQALVQVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFESVLRRRRSDI 128

Query: 122 GISSAVQKCLSSRKMIKKAVHKVLK-MERKQCHKENGC-----QLKEVEAVTYHSIVALL 181
           G SS+++KCLSSRK+IKKA+HKVLK ME KQ +K++       Q+KEVEAVTY SIV+LL
Sbjct: 129 GTSSSLKKCLSSRKLIKKAIHKVLKGMESKQTNKDSESFTFVNQIKEVEAVTYQSIVSLL 188

Query: 182 SFIAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDKEFQV 241
            FIAG KLPAKW+CW+SVSKLVQSKKVACISEETSIS+VERLDLALSSI N+++DK+FQ+
Sbjct: 189 FFIAGPKLPAKWNCWSSVSKLVQSKKVACISEETSISIVERLDLALSSITNHQSDKDFQI 248

Query: 242 QVEDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
            V DMQ+LLRDCGAS+K+V+EELEGLYRFII+ R+SLLNIFN+
Sbjct: 249 HVGDMQNLLRDCGASIKKVEEELEGLYRFIIKIRVSLLNIFNY 291

[Close]

BLAST of CmoCh19G008070 vs. NCBI nr
Match: gi|659094078|ref|XP_008447871.1| (PREDICTED: uncharacterized protein LOC103490224 [Cucumis melo])

HSP 1 Score: 390.2 bits (1001), Expect = 3.0e-105
Identity = 210/283 (74.20%), Postives = 248/283 (87.63%), Query Frame = 1


Query: 2   RTSQHVRSKSVPENPNPIISQVDEQLSRLKDSEA----TSSLCIRLGALQDLHESVDKLL 61
           R SQHVRSKSVP NP+PIISQVDEQLSRL+DSEA    +SSLC +L ALQDLH+SVDKLL
Sbjct: 9   RNSQHVRSKSVPSNPHPIISQVDEQLSRLRDSEAISSSSSSLCHKLSALQDLHDSVDKLL 68

Query: 62  LLPHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRTEM 121
           +LP +QQALV VSDKE LD+LLEGSLRLLDLCDTAK AL+QTREC +E E V+RRRR+E+
Sbjct: 69  ILPLSQQALVPVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFESVLRRRRSEI 128

Query: 122 GISSAVQKCLSSRKMIKKAVHKVLK-MERKQCHKENGC-----QLKEVEAVTYHSIVALL 181
           G SS+++KCLSSRKM+KKA+HKVLK ME KQ +K++       Q+KEVEAVT  SIV+LL
Sbjct: 129 GTSSSLKKCLSSRKMVKKAIHKVLKGMESKQSNKDSESFTFVNQIKEVEAVTSQSIVSLL 188

Query: 182 SFIAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDKEFQV 241
            FIAG KLPAKW CW+SVSKLVQSKKVACISEETSIS+VERLDLALSS++N+++DK+ Q+
Sbjct: 189 FFIAGPKLPAKWICWSSVSKLVQSKKVACISEETSISIVERLDLALSSVSNHQSDKDCQI 248

Query: 242 QVEDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
            V DMQ+LLRDCGAS+KEV+EELEGLYR II+TR+SLLNIFN+
Sbjct: 249 HVGDMQNLLRDCGASIKEVEEELEGLYRLIIKTRVSLLNIFNY 291

[Close]

BLAST of CmoCh19G008070 vs. NCBI nr
Match: gi|700188088|gb|KGN43321.1| (hypothetical protein Csa_7G023950 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 1.5e-93
Identity = 195/281 (69.40%), Postives = 235/281 (83.63%), Query Frame = 1


Query: 2   RTSQHVRSKSVPENPNPIISQVDEQLSRLK-DSEATSS-LCIRLGALQDLHESVDKLLLL 61
           R SQHVRSKS   NP+PIISQV+EQL RL+ DSEATSS LC RLGALQDL++ VDKLL+L
Sbjct: 9   RNSQHVRSKSENSNPHPIISQVNEQLRRLRPDSEATSSSLCHRLGALQDLYDGVDKLLVL 68

Query: 62  PHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRTEMGI 121
           P++Q ALVQ S++E  DDLLEGSL LLDLCDTAKN LLQTRECI+ELE ++RR+R E+  
Sbjct: 69  PNSQNALVQQSNEEVFDDLLEGSLMLLDLCDTAKNGLLQTRECIHELESILRRKRGEICT 128

Query: 122 SSAVQKCLSSRKMIKKAVHKVLK-MERKQCHKENGCQ-----LKEVEAVTYHSIVALLSF 181
           SS++ K   SRKMIKK + K LK ME +  HK +G       +KEVEA+TYHS+ +LLSF
Sbjct: 129 SSSLHK---SRKMIKKTIQKALKGMEGEPFHKVHGSLTIVNLIKEVEAITYHSLESLLSF 188

Query: 182 IAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQV 241
           IAG KLP+KWSCW+SVS LVQ K+VACISEET ISVVERLDLALSS  N++++KEFQ+Q 
Sbjct: 189 IAGPKLPSKWSCWSSVSMLVQPKRVACISEETDISVVERLDLALSSFTNHQSNKEFQIQD 248

Query: 242 EDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
           EDMQ+LLR+CGAS+KEV+EEL+GLYRFII+TR+SLLNIFN+
Sbjct: 249 EDMQNLLRECGASIKEVEEELDGLYRFIIKTRVSLLNIFNN 286

[Close]

BLAST of CmoCh19G008070 vs. NCBI nr
Match: gi|659094084|ref|XP_008447874.1| (PREDICTED: uncharacterized protein LOC103490228 [Cucumis melo])

HSP 1 Score: 339.0 bits (868), Expect = 7.9e-90
Identity = 189/282 (67.02%), Postives = 230/282 (81.56%), Query Frame = 1


Query: 2   RTSQHVRSKSVPENPNPIISQVDEQLSRLK-DSEATSS--LCIRLGALQDLHESVDKLLL 61
           R SQHVRSKS P NP+PIISQV+EQL RL+ DSE TSS  LC RLGALQDL++ VDKLL+
Sbjct: 9   RNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLYDGVDKLLV 68

Query: 62  LPHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRRTEMG 121
           L ++QQAL Q S+KE LDDL+EGSL LLDLCDTAKN LLQTRECI+ELE ++RR+R E+ 
Sbjct: 69  LLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESILRRKRGEIC 128

Query: 122 ISSAVQKCLSSRKMIKKAVHKVLK-MERKQCHKENGCQ-----LKEVEAVTYHSIVALLS 181
            SS++QK   SRKMIKK + K LK ME +  HK +G       +KEVEA+TYH + +LLS
Sbjct: 129 TSSSLQK---SRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCMESLLS 188

Query: 182 FIAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQ 241
           FIAG KL +KWSCW+SVSK VQ K+VACISEET IS +ERLDLALSS  N++++KE Q+Q
Sbjct: 189 FIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNKELQIQ 248

Query: 242 VEDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
            EDMQ+LLR+CGAS+KEV+EEL+ LYRFII+TR+SLLNI N+
Sbjct: 249 DEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN 287

[Close]

BLAST of CmoCh19G008070 vs. NCBI nr
Match: gi|449454406|ref|XP_004144946.1| (PREDICTED: uncharacterized protein LOC101212572 [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 1.9e-67
Identity = 152/285 (53.33%), Postives = 212/285 (74.39%), Query Frame = 1


Query: 2   RTSQHVRSKSVPENPNPIISQVDEQLSRLKD-SEATSS---LCIRLGALQDLHESVDKLL 61
           + S HVRS S+P  P+P I QVDEQL RLK+ S+ATSS   LC +L  LQDLH+S+D++L
Sbjct: 9   KNSHHVRSNSLPSKPHPFIDQVDEQLCRLKEVSKATSSSSELCHKLNDLQDLHDSIDRML 68

Query: 62  LLPHTQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVMRRRR-TE 121
           LL HTQ  LV+ SDK+  +DLLEGS++LLDLCD AK+ALLQ++EC++ELE V+RRRR  E
Sbjct: 69  LLSHTQHILVEESDKKSFNDLLEGSIKLLDLCDIAKDALLQSKECVHELESVLRRRRGGE 128

Query: 122 MGISSAVQKCLSSRKMIKKAVHKVLK-MERKQCHKENG-----CQLKEVEAVTYHSIVAL 181
           M I+S VQK LSSRK+IKK ++K LK +E K C K          LK+ E V Y+ + +L
Sbjct: 129 MFIASEVQKGLSSRKLIKKTINKALKAIETKSCEKSQASSAIVSSLKQAEVVGYNVVKSL 188

Query: 182 LSFIAGAKLPAKWSCWASVSKLVQSKKVACISEETSISVVERLDLALSSIANYRTDK-EF 241
           LS++AG K  +  S W+ VSKLVQSK+VAC  EET+ + V  +D AL SIA+ +T K +F
Sbjct: 189 LSYLAGPKFSSNSSHWSLVSKLVQSKRVACEVEETNRNEVALVDAALHSIASQKTKKSDF 248

Query: 242 QVQVEDMQSLLRDCGASVKEVQEELEGLYRFIIRTRISLLNIFNH 275
           +VQV+++Q+ L+  G+++++++ +LE LYR +I+TR+SLLNI+N+
Sbjct: 249 RVQVDNLQNALKIFGSNIEDLEGDLEALYRHLIKTRVSLLNIYNY 293

The following BLAST results are available for this feature:

BLAST of CmoCh19G008070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh19G008070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K1I3_CUCSA	2.2e-107	74.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023970 PE=4 SV=1	[more]
A0A0A0K659_CUCSA	1.1e-93	69.40	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023950 PE=4 SV=1	[more]
A0A0A0K2T0_CUCSA	1.3e-67	53.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023980 PE=4 SV=1	[more]
A0A0A0K2S2_CUCSA	1.3e-67	55.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023930 PE=4 SV=1	[more]
A0A0A0K0T5_CUCSA	3.3e-66	53.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023940 PE=4 SV=1	[more]

BLAST of CmoCh19G008070 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17070.1	2.5e-41	39.22	Arabidopsis protein of unknown function (DUF241)	[more]
AT2G17080.1	9.4e-41	38.52	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35200.1	2.0e-35	37.23	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35210.1	3.8e-34	36.13	Arabidopsis protein of unknown function (DUF241)	[more]
AT4G35690.1	4.3e-17	26.51	Arabidopsis protein of unknown function (DUF241)	[more]

BLAST of CmoCh19G008070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449454404\|ref\|XP_004144945.1\|	3.2e-107	74.91	PREDICTED: uncharacterized protein LOC101212326 [Cucumis sativus]	[more]
gi\|659094078\|ref\|XP_008447871.1\|	3.0e-105	74.20	PREDICTED: uncharacterized protein LOC103490224 [Cucumis melo]	[more]
gi\|700188088\|gb\|KGN43321.1\|	1.5e-93	69.40	hypothetical protein Csa_7G023950 [Cucumis sativus]	[more]
gi\|659094084\|ref\|XP_008447874.1\|	7.9e-90	67.02	PREDICTED: uncharacterized protein LOC103490228 [Cucumis melo]	[more]
gi\|449454406\|ref\|XP_004144946.1\|	1.9e-67	53.33	PREDICTED: uncharacterized protein LOC101212572 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004320	DUF241_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G008070.1	CmoCh19G008070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004320	Protein of unknown function DUF241, plant	PFAM	PF03087	DUF241	coord: 43..271 score: 1.6
None	No IPR available	PANTHER	PTHR31509	FAMILY NOT NAMED	coord: 1..274 score: 2.2
None	No IPR available	PANTHER	PTHR31509:SF12	SUBFAMILY NOT NAMED	coord: 1..274 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G008070	CmaCh19G007890	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G008070	Cla015760	Watermelon (97103) v1	cmowmB496
CmoCh19G008070	Csa7G023950	Cucumber (Chinese Long) v2	cmocuB518
CmoCh19G008070	MELO3C013268	Melon (DHL92) v3.5.1	cmomeB453
CmoCh19G008070	MELO3C028713.2	Melon (DHL92) v3.6.1	cmomedB522
CmoCh19G008070	CsaV3_7G001670	Cucumber (Chinese Long) v3	cmocucB0622
CmoCh19G008070	Cla97C02G030190	Watermelon (97103) v2	cmowmbB512
CmoCh19G008070	Bhi05G001372	Wax gourd	cmowgoB0653
CmoCh19G008070	CsGy7G001510	Cucumber (Gy14) v2	cgybcmoB927

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G008070	Cucurbita moschata (Rifu)	cmocmoB108
CmoCh19G008070	Cucurbita moschata (Rifu)	cmocmoB381
CmoCh19G008070	Cucurbita moschata (Rifu)	cmocmoB386
CmoCh19G008070	Cucumber (Gy14) v1	cgycmoB0210
CmoCh19G008070	Cucurbita maxima (Rimu)	cmacmoB145
CmoCh19G008070	Cucurbita maxima (Rimu)	cmacmoB549
CmoCh19G008070	Cucurbita maxima (Rimu)	cmacmoB596
CmoCh19G008070	Wild cucumber (PI 183967)	cmocpiB524
CmoCh19G008070	Wild cucumber (PI 183967)	cmocpiB528
CmoCh19G008070	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G008070	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G008070	Cucurbita pepo (Zucchini)	cmocpeB483
CmoCh19G008070	Cucurbita pepo (Zucchini)	cmocpeB492
CmoCh19G008070	Bottle gourd (USVL1VR-Ls)	cmolsiB457
CmoCh19G008070	Silver-seed gourd	carcmoB0286
CmoCh19G008070	Silver-seed gourd	carcmoB0471
CmoCh19G008070	Silver-seed gourd	carcmoB1152
CmoCh19G008070	Silver-seed gourd	carcmoB1406