CmaCh19G007890 (gene) Cucurbita maxima (Rimu)

NameCmaCh19G007890
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionEukaryotic translation initiation factor 3 subunit A, putative
LocationCma_Chr19 : 7657871 .. 7658695 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAACTCTCAGCATGTTCGTTCAAAGAGTGTGCCTGAAAATCCAAACCCAATCATCAGCCAAGTAGATGAGCAACTGAGCAGATTAAAGGATTCTGAAGCCCCTTCTTCTCTATGCATCAGACTAGGCGCCCTTCAAGATTTGCACGAGTCCGTGGATAAGCTGCTTCTTTTGCCTCACTCCCAACAAGCTCTGGTTCAAGTGAGTGACAAGGAAGGGCTGGATGACTTACTAGAAGGCTCTCTCAGGCTTCTGGATTTGTGTGACACAGCTAAGAATGCCTTGTTGCAGACAAGGGAATGCATATATGAATTAGAGATGGTTTTGCGTAGAAGGAGAACTGAAATGGGGATTTCTAGTTCAGTTCAGAAGTGTTTAAGTTCCAGGAAGATGATAAAGAAAGCAGTCCATGAAGTGTTGAAAATGGAAAGAAAACAATGTCATAAAGATAATGGAAGTCAGCTAAAAGAGGTTGAAGCAGTCACATACCACAGCATAGTAGCCTTATTGTCCTTCATAGCAGGAGCCAAGTTTCCAGCAAAATGGAGCTGCTGGACTTCAGTTTCCAAGCTTGTTAAATCCAAAAAAGTGGCCTGCATAAGCGAAGAAACAAGCATAAGTGTTGTAGAAAGGTTGGATTTGGCTTTGAGTTCAATTGCCAATTACAGAACTGACAAGGAATTCCAAGTTCAAGTTGAAGATATGCAGAGCTTGCTCAGGGATTGTGGAGCAAGCATTAAGGAAGTTCAAGAAGAGCTTGAGAGTCTTTATAGGTTCATAATCAGAACAAGAATCTCCCTTCTTAACATCTTCAACCACTAA

mRNA sequence

ATGAGAAACTCTCAGCATGTTCGTTCAAAGAGTGTGCCTGAAAATCCAAACCCAATCATCAGCCAAGTAGATGAGCAACTGAGCAGATTAAAGGATTCTGAAGCCCCTTCTTCTCTATGCATCAGACTAGGCGCCCTTCAAGATTTGCACGAGTCCGTGGATAAGCTGCTTCTTTTGCCTCACTCCCAACAAGCTCTGGTTCAAGTGAGTGACAAGGAAGGGCTGGATGACTTACTAGAAGGCTCTCTCAGGCTTCTGGATTTGTGTGACACAGCTAAGAATGCCTTGTTGCAGACAAGGGAATGCATATATGAATTAGAGATGGTTTTGCGTAGAAGGAGAACTGAAATGGGGATTTCTAGTTCAGTTCAGAAGTGTTTAAGTTCCAGGAAGATGATAAAGAAAGCAGTCCATGAAGTGTTGAAAATGGAAAGAAAACAATGTCATAAAGATAATGGAAGTCAGCTAAAAGAGGTTGAAGCAGTCACATACCACAGCATAGTAGCCTTATTGTCCTTCATAGCAGGAGCCAAGTTTCCAGCAAAATGGAGCTGCTGGACTTCAGTTTCCAAGCTTGTTAAATCCAAAAAAGTGGCCTGCATAAGCGAAGAAACAAGCATAAGTGTTGTAGAAAGGTTGGATTTGGCTTTGAGTTCAATTGCCAATTACAGAACTGACAAGGAATTCCAAGTTCAAGTTGAAGATATGCAGAGCTTGCTCAGGGATTGTGGAGCAAGCATTAAGGAAGTTCAAGAAGAGCTTGAGAGTCTTTATAGGTTCATAATCAGAACAAGAATCTCCCTTCTTAACATCTTCAACCACTAA

Coding sequence (CDS)

ATGAGAAACTCTCAGCATGTTCGTTCAAAGAGTGTGCCTGAAAATCCAAACCCAATCATCAGCCAAGTAGATGAGCAACTGAGCAGATTAAAGGATTCTGAAGCCCCTTCTTCTCTATGCATCAGACTAGGCGCCCTTCAAGATTTGCACGAGTCCGTGGATAAGCTGCTTCTTTTGCCTCACTCCCAACAAGCTCTGGTTCAAGTGAGTGACAAGGAAGGGCTGGATGACTTACTAGAAGGCTCTCTCAGGCTTCTGGATTTGTGTGACACAGCTAAGAATGCCTTGTTGCAGACAAGGGAATGCATATATGAATTAGAGATGGTTTTGCGTAGAAGGAGAACTGAAATGGGGATTTCTAGTTCAGTTCAGAAGTGTTTAAGTTCCAGGAAGATGATAAAGAAAGCAGTCCATGAAGTGTTGAAAATGGAAAGAAAACAATGTCATAAAGATAATGGAAGTCAGCTAAAAGAGGTTGAAGCAGTCACATACCACAGCATAGTAGCCTTATTGTCCTTCATAGCAGGAGCCAAGTTTCCAGCAAAATGGAGCTGCTGGACTTCAGTTTCCAAGCTTGTTAAATCCAAAAAAGTGGCCTGCATAAGCGAAGAAACAAGCATAAGTGTTGTAGAAAGGTTGGATTTGGCTTTGAGTTCAATTGCCAATTACAGAACTGACAAGGAATTCCAAGTTCAAGTTGAAGATATGCAGAGCTTGCTCAGGGATTGTGGAGCAAGCATTAAGGAAGTTCAAGAAGAGCTTGAGAGTCTTTATAGGTTCATAATCAGAACAAGAATCTCCCTTCTTAACATCTTCAACCACTAA

Protein sequence

MRNSQHVRSKSVPENPNPIISQVDEQLSRLKDSEAPSSLCIRLGALQDLHESVDKLLLLPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRTEMGISSSVQKCLSSRKMIKKAVHEVLKMERKQCHKDNGSQLKEVEAVTYHSIVALLSFIAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQVEDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH
BLAST of CmaCh19G007890 vs. TrEMBL
Match: A0A0A0K1I3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023970 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.9e-108
Identity = 215/283 (75.97%), Postives = 250/283 (88.34%), Query Frame = 1

Query: 2   RNSQHVRSKSVPENPNPIISQVDEQLSRLKDSEA----PSSLCIRLGALQDLHESVDKLL 61
           RNSQHVRSKSVP NP+PIISQVDEQLSRL+DSEA     SSLC +L ALQDLH+SVDKLL
Sbjct: 9   RNSQHVRSKSVPSNPHPIISQVDEQLSRLRDSEAISSSSSSLCHKLSALQDLHDSVDKLL 68

Query: 62  LLPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRTEM 121
           +LP SQQALVQVSDKE LD+LLEGSLRLLDLCDTAK AL+QTREC +E E VLRRRR+++
Sbjct: 69  ILPLSQQALVQVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFESVLRRRRSDI 128

Query: 122 GISSSVQKCLSSRKMIKKAVHEVLK-MERKQCHKDNGS-----QLKEVEAVTYHSIVALL 181
           G SSS++KCLSSRK+IKKA+H+VLK ME KQ +KD+ S     Q+KEVEAVTY SIV+LL
Sbjct: 129 GTSSSLKKCLSSRKLIKKAIHKVLKGMESKQTNKDSESFTFVNQIKEVEAVTYQSIVSLL 188

Query: 182 SFIAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQV 241
            FIAG K PAKW+CW+SVSKLV+SKKVACISEETSIS+VERLDLALSSI N+++DK+FQ+
Sbjct: 189 FFIAGPKLPAKWNCWSSVSKLVQSKKVACISEETSISIVERLDLALSSITNHQSDKDFQI 248

Query: 242 QVEDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
            V DMQ+LLRDCGASIK+V+EELE LYRFII+ R+SLLNIFN+
Sbjct: 249 HVGDMQNLLRDCGASIKKVEEELEGLYRFIIKIRVSLLNIFNY 291

BLAST of CmaCh19G007890 vs. TrEMBL
Match: A0A0A0K659_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023950 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 3.1e-93
Identity = 196/281 (69.75%), Postives = 234/281 (83.27%), Query Frame = 1

Query: 2   RNSQHVRSKSVPENPNPIISQVDEQLSRLK-DSEAPSS-LCIRLGALQDLHESVDKLLLL 61
           RNSQHVRSKS   NP+PIISQV+EQL RL+ DSEA SS LC RLGALQDL++ VDKLL+L
Sbjct: 9   RNSQHVRSKSENSNPHPIISQVNEQLRRLRPDSEATSSSLCHRLGALQDLYDGVDKLLVL 68

Query: 62  PHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRTEMGI 121
           P+SQ ALVQ S++E  DDLLEGSL LLDLCDTAKN LLQTRECI+ELE +LRR+R E+  
Sbjct: 69  PNSQNALVQQSNEEVFDDLLEGSLMLLDLCDTAKNGLLQTRECIHELESILRRKRGEICT 128

Query: 122 SSSVQKCLSSRKMIKKAVHEVLK-MERKQCHKDNGSQ-----LKEVEAVTYHSIVALLSF 181
           SSS+ K   SRKMIKK + + LK ME +  HK +GS      +KEVEA+TYHS+ +LLSF
Sbjct: 129 SSSLHK---SRKMIKKTIQKALKGMEGEPFHKVHGSLTIVNLIKEVEAITYHSLESLLSF 188

Query: 182 IAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQV 241
           IAG K P+KWSCW+SVS LV+ K+VACISEET ISVVERLDLALSS  N++++KEFQ+Q 
Sbjct: 189 IAGPKLPSKWSCWSSVSMLVQPKRVACISEETDISVVERLDLALSSFTNHQSNKEFQIQD 248

Query: 242 EDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
           EDMQ+LLR+CGASIKEV+EEL+ LYRFII+TR+SLLNIFN+
Sbjct: 249 EDMQNLLRECGASIKEVEEELDGLYRFIIKTRVSLLNIFNN 286

BLAST of CmaCh19G007890 vs. TrEMBL
Match: A0A0A0K2T0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023980 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.5e-68
Identity = 153/285 (53.68%), Postives = 215/285 (75.44%), Query Frame = 1

Query: 2   RNSQHVRSKSVPENPNPIISQVDEQLSRLKD-SEAPSS---LCIRLGALQDLHESVDKLL 61
           +NS HVRS S+P  P+P I QVDEQL RLK+ S+A SS   LC +L  LQDLH+S+D++L
Sbjct: 9   KNSHHVRSNSLPSKPHPFIDQVDEQLCRLKEVSKATSSSSELCHKLNDLQDLHDSIDRML 68

Query: 62  LLPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRR-TE 121
           LL H+Q  LV+ SDK+  +DLLEGS++LLDLCD AK+ALLQ++EC++ELE VLRRRR  E
Sbjct: 69  LLSHTQHILVEESDKKSFNDLLEGSIKLLDLCDIAKDALLQSKECVHELESVLRRRRGGE 128

Query: 122 MGISSSVQKCLSSRKMIKKAVHEVLK-MERKQCHKDNG-----SQLKEVEAVTYHSIVAL 181
           M I+S VQK LSSRK+IKK +++ LK +E K C K        S LK+ E V Y+ + +L
Sbjct: 129 MFIASEVQKGLSSRKLIKKTINKALKAIETKSCEKSQASSAIVSSLKQAEVVGYNVVKSL 188

Query: 182 LSFIAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDK-EF 241
           LS++AG KF +  S W+ VSKLV+SK+VAC  EET+ + V  +D AL SIA+ +T K +F
Sbjct: 189 LSYLAGPKFSSNSSHWSLVSKLVQSKRVACEVEETNRNEVALVDAALHSIASQKTKKSDF 248

Query: 242 QVQVEDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
           +VQV+++Q+ L+  G++I++++ +LE+LYR +I+TR+SLLNI+N+
Sbjct: 249 RVQVDNLQNALKIFGSNIEDLEGDLEALYRHLIKTRVSLLNIYNY 293

BLAST of CmaCh19G007890 vs. TrEMBL
Match: A0A0A0K2S2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023930 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.5e-66
Identity = 152/282 (53.90%), Postives = 200/282 (70.92%), Query Frame = 1

Query: 2   RNSQHVRSKSVPENPNPIISQVDEQLSRLKDSEAPSS---LCIRLGALQDLHESVDKLLL 61
           + + HVRS S+P  P+PI++QVDE L RLK SEA SS   LC RL +LQDLH+ +DKLLL
Sbjct: 9   KKTLHVRSNSLPSKPHPIVNQVDEHLCRLKSSEATSSTSSLCHRLNSLQDLHDCIDKLLL 68

Query: 62  LPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRTEMG 121
           LP +QQ LV  SD +  DD LEGSL++L+LCD AK+ALLQT+EC+ ELE VLRRRR E  
Sbjct: 69  LPFTQQTLVNESDNKWTDDFLEGSLKVLELCDIAKDALLQTKECVRELESVLRRRRDEAV 128

Query: 122 ISSSVQKCLSSRKMIKKAVHEVLKMERKQCHKDNG------SQLKEVEAVTYHSIVALLS 181
           IS  +QKCLSSRKMIKKAV + LK  +  C + +       S LKEVEA+T+ +I ++LS
Sbjct: 129 ISRDLQKCLSSRKMIKKAVQKALKGIKSNCSQQSEETSATVSLLKEVEAITFSTIESVLS 188

Query: 182 FIAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQ 241
           FIAG K P++WS    VSKLV+SK+VA   E+   + VE +D  LS+IA++ TDK     
Sbjct: 189 FIAGPKLPSRWS---FVSKLVQSKRVANKDEDAYENEVEMVDATLSAIASHTTDKSV--- 248

Query: 242 VEDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
             ++Q  LR   +SI++++E+LESL R +I+ R+SLLNI NH
Sbjct: 249 --NLQDQLRKIESSIRDLEEDLESLQRHLIKNRVSLLNILNH 282

BLAST of CmaCh19G007890 vs. TrEMBL
Match: A0A0A0K0T5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023940 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.6e-66
Identity = 149/281 (53.02%), Postives = 199/281 (70.82%), Query Frame = 1

Query: 2   RNSQHVRSKSVPENPNPIISQVDEQLSRLKDSEAPSS---LCIRLGALQDLHESVDKLLL 61
           + S H+RS S+P  P+PI+ +V+E L RLK SEA SS   LC RL +LQ LH+S+DKLLL
Sbjct: 9   KKSLHIRSNSLPSRPHPIVVEVEENLCRLKSSEAASSTFSLCYRLNSLQALHDSIDKLLL 68

Query: 62  LPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRTEMG 121
           LP +QQ LV  S K+  DDLLEGSLRL+DLCD AK+ALLQTRECI+ELE  LRRR +E  
Sbjct: 69  LPSTQQTLVHESGKKWADDLLEGSLRLIDLCDIAKDALLQTRECIHELESDLRRRSSERI 128

Query: 122 ISSSVQKCLSSRKMIKKAVHEVLKMERKQCHKDNG-----SQLKEVEAVTYHSIVALLSF 181
           I+S VQKCL SRKMIK+ V + LK  +    K        S LKEVEA+TY ++ +++S 
Sbjct: 129 ITSDVQKCLKSRKMIKRTVQKALKGIKISSQKSEESLATVSLLKEVEAITYSTVESVMSN 188

Query: 182 IAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQV 241
           + G K P+K+S W+ VSKLV+SK+VA   E+ + + VE +   L+SIA++ TDK F    
Sbjct: 189 VVGPKLPSKFSPWSLVSKLVQSKRVASHDEDANANEVEMVGATLNSIASHTTDKSF---- 248

Query: 242 EDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
            ++Q LLR   +SI++ +E+LESLYR +I+ R+SLLNI N+
Sbjct: 249 -NLQDLLRKSESSIQDFEEDLESLYRHLIKNRVSLLNILNN 284

BLAST of CmaCh19G007890 vs. TAIR10
Match: AT2G17070.1 (AT2G17070.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 164.9 bits (416), Expect = 7.2e-41
Identity = 112/283 (39.58%), Postives = 179/283 (63.25%), Query Frame = 1

Query: 1   MRNSQHVRSKSVPENPNPIISQVDEQLSRLKDSE-----APSSLCIRLGALQDLHESVDK 60
           M  S HVRS S P  P+P  + VDEQL+RL+ SE     + SS+C RL  LQ+LHES+DK
Sbjct: 1   MAVSFHVRSHSYPSIPHPQAAHVDEQLARLRSSEETSTSSSSSICQRLDNLQELHESLDK 60

Query: 61  LLLLPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRT 120
           L+ LP +QQAL Q  +K+ ++ LL+GSL++LD+C+ +K+AL Q +E + E++ +LRR+R 
Sbjct: 61  LIRLPVTQQALGQEKNKKDVEQLLDGSLKILDVCNISKDALSQMKEGLMEIQSILRRKRG 120

Query: 121 EMGISSSVQKCLSSRKMIKKAVHEV---LKMERKQCHKDNG-SQLKEVEAVTYHSIVALL 180
           +  +S  V+K L+SRK  KK   +V   LK  + + +KD   +   E EAVT     +L 
Sbjct: 121 D--LSGEVKKYLASRKSFKKTFQKVQKSLKAAQAEDNKDKSLAVFGEAEAVTIAMFDSLF 180

Query: 181 SFIAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQV 240
           S+++G+K  +KWS    VSKL+  KK+ C ++E   + V+         + ++++K   +
Sbjct: 181 SYMSGSKTCSKWSV---VSKLMNKKKITCEAQENEFTKVD---------SEFQSEK--TL 240

Query: 241 QVEDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
           ++ED+Q +L  C   I++ ++ LESL + +I+ R+S+LN F H
Sbjct: 241 KMEDVQ-ILESC---IQDFEDGLESLSKSLIKYRVSILNSFGH 263

BLAST of CmaCh19G007890 vs. TAIR10
Match: AT2G17080.1 (AT2G17080.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-40
Identity = 109/283 (38.52%), Postives = 177/283 (62.54%), Query Frame = 1

Query: 1   MRNSQHVRSKSVPENPNPIISQVDEQLSRLKDSE-----APSSLCIRLGALQDLHESVDK 60
           M  S HVRS S P   +P  + VDEQL+RL+ SE     + SS+C RL  LQ+LHES+DK
Sbjct: 1   MAVSFHVRSNSFPSRSHPQAAHVDEQLARLRSSEQASSSSSSSICQRLDNLQELHESLDK 60

Query: 61  LLLLPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRT 120
           L+  P +QQAL Q  +K+ ++ LL+GSLR+LDLC+ +K+AL + +E + E++ +LRR+R 
Sbjct: 61  LISRPVTQQALSQEHNKKAVEQLLDGSLRILDLCNISKDALSEMKEGLMEIQSILRRKRG 120

Query: 121 EMGISSSVQKCLSSRKMIKKAVHEVLKMERKQCHKDNGSQ----LKEVEAVTYHSIVALL 180
           +  +S  V+K L+SRK +KK+  +V K  +    +DN         E EA+T     +LL
Sbjct: 121 D--LSEEVKKYLTSRKSLKKSFQKVQKSLKVTQAEDNNDDTLAVFGEAEAITLSLFDSLL 180

Query: 181 SFIAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQV 240
           S+++G+K  +KWS    VSKL+  KKV C ++E   + V+         + ++++K   +
Sbjct: 181 SYMSGSKTCSKWSV---VSKLMNKKKVTCEAQENEFTKVD---------SEFQSEK--TL 240

Query: 241 QVEDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
           +++D+Q+L     + I+++++ LESL + +I+ R+S LNI  H
Sbjct: 241 KMDDVQNL----ESCIQDLEDGLESLSKSLIKYRVSFLNILGH 263

BLAST of CmaCh19G007890 vs. TAIR10
Match: AT4G35200.1 (AT4G35200.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 144.4 bits (363), Expect = 1.0e-34
Identity = 106/282 (37.59%), Postives = 166/282 (58.87%), Query Frame = 1

Query: 1   MRNSQHVRSKSVPENPNPIISQVDEQLSRLK--DSEAPSSLCIRLGALQDLHESVDKLLL 60
           M  S HVRS S P   +P  + VDEQL+RL+  DS + SS+C RL  LQDLH+S++K++ 
Sbjct: 1   MAVSFHVRSNSYPSRQHPQAAHVDEQLTRLRSSDSASSSSICQRLSNLQDLHDSLEKMIR 60

Query: 61  LPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRTEMG 120
           L  +  AL Q    + ++ LL+GSLR+LDLC+ AK+A+ Q +E + E++ +LRR+  +  
Sbjct: 61  LSVTNLALSQ----DQIEKLLDGSLRILDLCNIAKDAISQMKEGLMEIQSILRRKPGD-- 120

Query: 121 ISSSVQKCLSSRKMIKKAVHEVLKMERKQCHKDNGSQLKEV-----EAVTYHSIVALLSF 180
           +S  V+K L SRK +KK++ +V+K   K C   + +    V     EAVT     +L SF
Sbjct: 121 LSGEVKKYLVSRKFLKKSLQKVIK-SLKVCQSKDSTNASLVVFGRAEAVTMALFESLFSF 180

Query: 181 IAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQ--- 240
           ++G+K   KWS    VSK++   KV C +E    +               R D EFQ   
Sbjct: 181 MSGSKACGKWSL---VSKMMSQNKVTCEAEANEFT---------------RIDSEFQSEK 240

Query: 241 -VQVEDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNI 272
            +Q+ED+Q+L     + I+++++ +ESL + +I+ R+S+LNI
Sbjct: 241 SLQMEDVQNL----ESCIQDLEDGIESLSKSLIKYRVSILNI 253

BLAST of CmaCh19G007890 vs. TAIR10
Match: AT4G35210.1 (AT4G35210.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-33
Identity = 100/274 (36.50%), Postives = 164/274 (59.85%), Query Frame = 1

Query: 1   MRNSQHVRSKSVPENPNPIISQVDEQLSRLKDS--EAPSSLCIRLGALQDLHESVDKLLL 60
           M  S HVRS S P   +P  + VDEQL+RL+ S   + SS+C RL  LQDLH+S++K++ 
Sbjct: 1   MAVSFHVRSSSYPSRQHPQAAHVDEQLTRLRSSGTASSSSICQRLSNLQDLHDSLEKMIR 60

Query: 61  LPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRTEMG 120
           L  + QAL Q    + ++ LL+GS+++LDLC  +K+ L Q +E + E++ ++RR+R +  
Sbjct: 61  LSVTNQALSQ----DQIEKLLDGSIKILDLCSISKDGLSQMKESLKEIQSIVRRKRGD-- 120

Query: 121 ISSSVQKCLSSRKMIKKAVHEVLK-MERKQCHKDNGSQLKEVEAVTYHSIVALLSFIAGA 180
           +S+ V+K L+SRK +KK+  +VLK ++  Q   D  +   E E VT     +L SF++G+
Sbjct: 121 LSAEVKKYLASRKFLKKSFEKVLKSLKTSQNKNDALAVFGEAETVTIALFESLFSFMSGS 180

Query: 181 KFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQVEDMQ 240
           K   KWS    VSK++   K  C +E    +   R+D+   S        E  +Q+ED+Q
Sbjct: 181 KACGKWSL---VSKMMSQSKGTCEAEANEFT---RVDMEFQS--------EKSLQMEDVQ 240

Query: 241 SLLRDCGASIKEVQEELESLYRFIIRTRISLLNI 272
           +L       I+++++ + SL + +I+ R+S+LNI
Sbjct: 241 NL----EICIQDLEDGIGSLSKSLIKYRVSILNI 250

BLAST of CmaCh19G007890 vs. TAIR10
Match: AT4G35690.1 (AT4G35690.1 Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 82.0 bits (201), Expect = 6.1e-16
Identity = 72/292 (24.66%), Postives = 151/292 (51.71%), Query Frame = 1

Query: 7   VRSKSVPENPNPIISQVDEQLSRLKD----SEAPSSLCIRLGALQDLHESVDKLLLLPHS 66
           +RS S+P + +P  + ++E L+++K     + +  S+ + L  L++L+   +  L +  +
Sbjct: 10  LRSISLPSSSHPSTTGIEESLNKVKTINTMTGSSESVLMGLEGLEELYNCTEDFLKMGST 69

Query: 67  QQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRTEMG---I 126
           Q+ +      E ++++L+GSLRL+D+C  +++ +++T+E +  ++  +RR++   G   +
Sbjct: 70  QRVMSSSDGSEFMEEMLDGSLRLMDICSVSRDLMVETQEHVRGVQSCVRRKKVVGGEDQL 129

Query: 127 SSSVQKCLSSRKMIKKAVHEVLKMER-------KQCHKDNGSQ----------LKEVEAV 186
             +V   +  RK ++K    +L   +            +NG Q          +++V +V
Sbjct: 130 DVAVAGYVGFRKNMRKEAKRLLGSLKNIDGGLSSSSSVNNGEQEEHLVVVVDAMRQVVSV 189

Query: 187 TYHSIVALLSFIAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIAN 246
           +   + + L F++G +   + +  + ++ ++K KKV  + EET  + +E LDL +    N
Sbjct: 190 SVAVLRSFLEFLSGRR---QSNIKSKLASVLKKKKVHHV-EETK-NELENLDLEIFCSRN 249

Query: 247 YRTDKEFQVQVEDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
                       D+Q  L +   SI   +++LE L+R +IRTR SLLNI +H
Sbjct: 250 ------------DLQKKLEEVEMSIDGFEKKLEGLFRRLIRTRASLLNIISH 284

BLAST of CmaCh19G007890 vs. NCBI nr
Match: gi|449454404|ref|XP_004144945.1| (PREDICTED: uncharacterized protein LOC101212326 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 8.4e-108
Identity = 215/283 (75.97%), Postives = 250/283 (88.34%), Query Frame = 1

Query: 2   RNSQHVRSKSVPENPNPIISQVDEQLSRLKDSEA----PSSLCIRLGALQDLHESVDKLL 61
           RNSQHVRSKSVP NP+PIISQVDEQLSRL+DSEA     SSLC +L ALQDLH+SVDKLL
Sbjct: 9   RNSQHVRSKSVPSNPHPIISQVDEQLSRLRDSEAISSSSSSLCHKLSALQDLHDSVDKLL 68

Query: 62  LLPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRTEM 121
           +LP SQQALVQVSDKE LD+LLEGSLRLLDLCDTAK AL+QTREC +E E VLRRRR+++
Sbjct: 69  ILPLSQQALVQVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFESVLRRRRSDI 128

Query: 122 GISSSVQKCLSSRKMIKKAVHEVLK-MERKQCHKDNGS-----QLKEVEAVTYHSIVALL 181
           G SSS++KCLSSRK+IKKA+H+VLK ME KQ +KD+ S     Q+KEVEAVTY SIV+LL
Sbjct: 129 GTSSSLKKCLSSRKLIKKAIHKVLKGMESKQTNKDSESFTFVNQIKEVEAVTYQSIVSLL 188

Query: 182 SFIAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQV 241
            FIAG K PAKW+CW+SVSKLV+SKKVACISEETSIS+VERLDLALSSI N+++DK+FQ+
Sbjct: 189 FFIAGPKLPAKWNCWSSVSKLVQSKKVACISEETSISIVERLDLALSSITNHQSDKDFQI 248

Query: 242 QVEDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
            V DMQ+LLRDCGASIK+V+EELE LYRFII+ R+SLLNIFN+
Sbjct: 249 HVGDMQNLLRDCGASIKKVEEELEGLYRFIIKIRVSLLNIFNY 291

BLAST of CmaCh19G007890 vs. NCBI nr
Match: gi|659094078|ref|XP_008447871.1| (PREDICTED: uncharacterized protein LOC103490224 [Cucumis melo])

HSP 1 Score: 392.1 bits (1006), Expect = 7.9e-106
Identity = 213/283 (75.27%), Postives = 247/283 (87.28%), Query Frame = 1

Query: 2   RNSQHVRSKSVPENPNPIISQVDEQLSRLKDSEA----PSSLCIRLGALQDLHESVDKLL 61
           RNSQHVRSKSVP NP+PIISQVDEQLSRL+DSEA     SSLC +L ALQDLH+SVDKLL
Sbjct: 9   RNSQHVRSKSVPSNPHPIISQVDEQLSRLRDSEAISSSSSSLCHKLSALQDLHDSVDKLL 68

Query: 62  LLPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRTEM 121
           +LP SQQALV VSDKE LD+LLEGSLRLLDLCDTAK AL+QTREC +E E VLRRRR+E+
Sbjct: 69  ILPLSQQALVPVSDKEELDNLLEGSLRLLDLCDTAKKALMQTRECTHEFESVLRRRRSEI 128

Query: 122 GISSSVQKCLSSRKMIKKAVHEVLK-MERKQCHKDNGS-----QLKEVEAVTYHSIVALL 181
           G SSS++KCLSSRKM+KKA+H+VLK ME KQ +KD+ S     Q+KEVEAVT  SIV+LL
Sbjct: 129 GTSSSLKKCLSSRKMVKKAIHKVLKGMESKQSNKDSESFTFVNQIKEVEAVTSQSIVSLL 188

Query: 182 SFIAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQV 241
            FIAG K PAKW CW+SVSKLV+SKKVACISEETSIS+VERLDLALSS++N+++DK+ Q+
Sbjct: 189 FFIAGPKLPAKWICWSSVSKLVQSKKVACISEETSISIVERLDLALSSVSNHQSDKDCQI 248

Query: 242 QVEDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
            V DMQ+LLRDCGASIKEV+EELE LYR II+TR+SLLNIFN+
Sbjct: 249 HVGDMQNLLRDCGASIKEVEEELEGLYRLIIKTRVSLLNIFNY 291

BLAST of CmaCh19G007890 vs. NCBI nr
Match: gi|700188088|gb|KGN43321.1| (hypothetical protein Csa_7G023950 [Cucumis sativus])

HSP 1 Score: 349.7 bits (896), Expect = 4.5e-93
Identity = 196/281 (69.75%), Postives = 234/281 (83.27%), Query Frame = 1

Query: 2   RNSQHVRSKSVPENPNPIISQVDEQLSRLK-DSEAPSS-LCIRLGALQDLHESVDKLLLL 61
           RNSQHVRSKS   NP+PIISQV+EQL RL+ DSEA SS LC RLGALQDL++ VDKLL+L
Sbjct: 9   RNSQHVRSKSENSNPHPIISQVNEQLRRLRPDSEATSSSLCHRLGALQDLYDGVDKLLVL 68

Query: 62  PHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRTEMGI 121
           P+SQ ALVQ S++E  DDLLEGSL LLDLCDTAKN LLQTRECI+ELE +LRR+R E+  
Sbjct: 69  PNSQNALVQQSNEEVFDDLLEGSLMLLDLCDTAKNGLLQTRECIHELESILRRKRGEICT 128

Query: 122 SSSVQKCLSSRKMIKKAVHEVLK-MERKQCHKDNGSQ-----LKEVEAVTYHSIVALLSF 181
           SSS+ K   SRKMIKK + + LK ME +  HK +GS      +KEVEA+TYHS+ +LLSF
Sbjct: 129 SSSLHK---SRKMIKKTIQKALKGMEGEPFHKVHGSLTIVNLIKEVEAITYHSLESLLSF 188

Query: 182 IAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQV 241
           IAG K P+KWSCW+SVS LV+ K+VACISEET ISVVERLDLALSS  N++++KEFQ+Q 
Sbjct: 189 IAGPKLPSKWSCWSSVSMLVQPKRVACISEETDISVVERLDLALSSFTNHQSNKEFQIQD 248

Query: 242 EDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
           EDMQ+LLR+CGASIKEV+EEL+ LYRFII+TR+SLLNIFN+
Sbjct: 249 EDMQNLLRECGASIKEVEEELDGLYRFIIKTRVSLLNIFNN 286

BLAST of CmaCh19G007890 vs. NCBI nr
Match: gi|659094084|ref|XP_008447874.1| (PREDICTED: uncharacterized protein LOC103490228 [Cucumis melo])

HSP 1 Score: 341.7 bits (875), Expect = 1.2e-90
Identity = 192/282 (68.09%), Postives = 232/282 (82.27%), Query Frame = 1

Query: 2   RNSQHVRSKSVPENPNPIISQVDEQLSRLK-DSE--APSSLCIRLGALQDLHESVDKLLL 61
           RNSQHVRSKS P NP+PIISQV+EQL RL+ DSE  + SSLC RLGALQDL++ VDKLL+
Sbjct: 9   RNSQHVRSKSEPSNPHPIISQVNEQLRRLRPDSETTSSSSLCHRLGALQDLYDGVDKLLV 68

Query: 62  LPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRRTEMG 121
           L +SQQAL Q S+KE LDDL+EGSL LLDLCDTAKN LLQTRECI+ELE +LRR+R E+ 
Sbjct: 69  LLNSQQALAQQSNKEVLDDLIEGSLMLLDLCDTAKNGLLQTRECIHELESILRRKRGEIC 128

Query: 122 ISSSVQKCLSSRKMIKKAVHEVLK-MERKQCHKDNGSQ-----LKEVEAVTYHSIVALLS 181
            SSS+QK   SRKMIKK + + LK ME +  HK +GS      +KEVEA+TYH + +LLS
Sbjct: 129 TSSSLQK---SRKMIKKTIQKSLKGMEGEHFHKVHGSLTIVNLIKEVEAITYHCMESLLS 188

Query: 182 FIAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDKEFQVQ 241
           FIAG K  +KWSCW+SVSK V+ K+VACISEET IS +ERLDLALSS  N++++KE Q+Q
Sbjct: 189 FIAGPKLASKWSCWSSVSKFVQPKRVACISEETDISEIERLDLALSSFTNHQSNKELQIQ 248

Query: 242 VEDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
            EDMQ+LLR+CGASIKEV+EEL+SLYRFII+TR+SLLNI N+
Sbjct: 249 DEDMQNLLRECGASIKEVEEELDSLYRFIIKTRVSLLNILNN 287

BLAST of CmaCh19G007890 vs. NCBI nr
Match: gi|449454406|ref|XP_004144946.1| (PREDICTED: uncharacterized protein LOC101212572 [Cucumis sativus])

HSP 1 Score: 266.5 bits (680), Expect = 5.0e-68
Identity = 153/285 (53.68%), Postives = 215/285 (75.44%), Query Frame = 1

Query: 2   RNSQHVRSKSVPENPNPIISQVDEQLSRLKD-SEAPSS---LCIRLGALQDLHESVDKLL 61
           +NS HVRS S+P  P+P I QVDEQL RLK+ S+A SS   LC +L  LQDLH+S+D++L
Sbjct: 9   KNSHHVRSNSLPSKPHPFIDQVDEQLCRLKEVSKATSSSSELCHKLNDLQDLHDSIDRML 68

Query: 62  LLPHSQQALVQVSDKEGLDDLLEGSLRLLDLCDTAKNALLQTRECIYELEMVLRRRR-TE 121
           LL H+Q  LV+ SDK+  +DLLEGS++LLDLCD AK+ALLQ++EC++ELE VLRRRR  E
Sbjct: 69  LLSHTQHILVEESDKKSFNDLLEGSIKLLDLCDIAKDALLQSKECVHELESVLRRRRGGE 128

Query: 122 MGISSSVQKCLSSRKMIKKAVHEVLK-MERKQCHKDNG-----SQLKEVEAVTYHSIVAL 181
           M I+S VQK LSSRK+IKK +++ LK +E K C K        S LK+ E V Y+ + +L
Sbjct: 129 MFIASEVQKGLSSRKLIKKTINKALKAIETKSCEKSQASSAIVSSLKQAEVVGYNVVKSL 188

Query: 182 LSFIAGAKFPAKWSCWTSVSKLVKSKKVACISEETSISVVERLDLALSSIANYRTDK-EF 241
           LS++AG KF +  S W+ VSKLV+SK+VAC  EET+ + V  +D AL SIA+ +T K +F
Sbjct: 189 LSYLAGPKFSSNSSHWSLVSKLVQSKRVACEVEETNRNEVALVDAALHSIASQKTKKSDF 248

Query: 242 QVQVEDMQSLLRDCGASIKEVQEELESLYRFIIRTRISLLNIFNH 275
           +VQV+++Q+ L+  G++I++++ +LE+LYR +I+TR+SLLNI+N+
Sbjct: 249 RVQVDNLQNALKIFGSNIEDLEGDLEALYRHLIKTRVSLLNIYNY 293

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K1I3_CUCSA5.9e-10875.97Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023970 PE=4 SV=1[more]
A0A0A0K659_CUCSA3.1e-9369.75Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023950 PE=4 SV=1[more]
A0A0A0K2T0_CUCSA3.5e-6853.68Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023980 PE=4 SV=1[more]
A0A0A0K2S2_CUCSA2.5e-6653.90Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023930 PE=4 SV=1[more]
A0A0A0K0T5_CUCSA5.6e-6653.02Uncharacterized protein OS=Cucumis sativus GN=Csa_7G023940 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G17070.17.2e-4139.58 Arabidopsis protein of unknown function (DUF241)[more]
AT2G17080.11.2e-4038.52 Arabidopsis protein of unknown function (DUF241)[more]
AT4G35200.11.0e-3437.59 Arabidopsis protein of unknown function (DUF241)[more]
AT4G35210.11.5e-3336.50 Arabidopsis protein of unknown function (DUF241)[more]
AT4G35690.16.1e-1624.66 Arabidopsis protein of unknown function (DUF241)[more]
Match NameE-valueIdentityDescription
gi|449454404|ref|XP_004144945.1|8.4e-10875.97PREDICTED: uncharacterized protein LOC101212326 [Cucumis sativus][more]
gi|659094078|ref|XP_008447871.1|7.9e-10675.27PREDICTED: uncharacterized protein LOC103490224 [Cucumis melo][more]
gi|700188088|gb|KGN43321.1|4.5e-9369.75hypothetical protein Csa_7G023950 [Cucumis sativus][more]
gi|659094084|ref|XP_008447874.1|1.2e-9068.09PREDICTED: uncharacterized protein LOC103490228 [Cucumis melo][more]
gi|449454406|ref|XP_004144946.1|5.0e-6853.68PREDICTED: uncharacterized protein LOC101212572 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004320DUF241_pln
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G007890.1CmaCh19G007890.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004320Protein of unknown function DUF241, plantPFAMPF03087DUF241coord: 43..271
score: 7.1
NoneNo IPR availablePANTHERPTHR31509FAMILY NOT NAMEDcoord: 1..274
score: 7.8
NoneNo IPR availablePANTHERPTHR31509:SF12SUBFAMILY NOT NAMEDcoord: 1..274
score: 7.8

The following gene(s) are paralogous to this gene:

None