CmoCh19G006530 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAATTCTCAAAATTAAGAGTGTTTGTCCCGCCGGATTCCGTGGTTTTTTCTACGACAATGGAATTTTTTCTCGAAGAAGGAAAGCAAGTTCATGGCAAGAGCTCCACTCTGATTCTGGTTCGTTCTTTTCTGAGCTTCTTCTTCTTTTCATCGTTTTGCCTTTCTATCCATTAATCAATCTAGCAGAAGATTTTTGCATCTTATTAGCTTCGAGTGGTTTGAATGTTTATGAAATTCCTAGAAAATAGGAAGGAAAATGGAAATCTAATTCGGCGAGCTATTAATTGTTCATAGAGCTCGAAAGGAGGCTGAAGGTTTATGTGGCTGATTGTGATTTGATGAGTTTTTTAGTTTGTATTCCTCTTAACACGGCGAGAATTTTTGTTATGTTTCTACAATAAGTTGTTACTTGCAGGCATTGCCCATTCATGGAAGTGCATGTGTTCATGTAATTTGATCATACCATCCCTTTAGCCCAGCCCTTTCCTGTCAAACTTGACCAGAAGACTTATATGGTCTGGAATAATCAAGTCATGGTCATGAAAATGTGATAAACAGAACCCACTCGAGCTGATTCTGAAGAACAGCCTGAGCAATGATGAGTATCATGTGTATGGTTTATATACAAGACCTCGTAGCCAGCATTTATTTCCTCGCCTAGGTAGCTAACTACTAACAAAACCAATTTCCCTTTTTGCCTTATCTTGCATAATCATTTACAATTGGAGGCCTAATAGATGGTGGCATGTACGGAAGGTGCCATTTGAGGATTGTGGATTTTCTTCTGGAACTGAAATATGGATGCATTGTTGAGAAAATAAGAATGAACTATATCACCTTTCAACTATTGAACTAAGGAACAGCTACACAGTTCTCAAAGGGCAGCATGGCTAGCATATCTAGGCAGAAGCAATGACATAGCAAATGAGTTGGAGGCAATTGGTGAAACTTTTACTACTACTGGCCATCTAAGATATCTTGAAAGTTTTGACAAGCAATTTTTTGGATGCATAAGTAGCCCACATATAAGTTATGCATTTGGATTGGAGAATAAAAATTTGGAGTTAAGTTGCAGTTTGCTGGAACCAAATTGATGAGCTTTCTAATATAAAGGTCCAGAAAGTTCAATTGAACATTCTCCAGAAAACAGAAACTCAAAGAAATGTTAGGTTTGTAGAAAACTAGGCCAGTCAGTACTATTCTACTACGATCATGTTTATCTTAACTATCAGCCTTGGAATCACAATATTTATGCCCATTTTACCCATTTTAAGTCGTGGCCACTACAGATTGTATGTATGTTATAGACCCAGCTGTCTCCTCAATTCGTAAAGAAAAAAACTGGGTAGTGGCCATTCCTTAACTCTCAAGAGCCCCATCGTGGTGCTAACAAGGTTGATGTTCGAAACTGTATCTTTATAATGTTGGCAATGCTCAACTCCCAACTCCCCTTTAACAATCTATCTTTGTAACTCATTTGGGAGTTTACAAAAAAAAATTTAGTGTTAGTTTAACCATCTTTGTATTTGAGTGTTTTCTTTGTTAGGGAACTTCCACCAAGAGAGTCTTGACAATGACCTCTATTCCACCTAACTCCTCCACCAATATGAATAAAGTGCTTCCTTATGGCCTAGTGGACCTCGTCACAATGCATTTCTAGTCAAGTTTTTTATGTAAATTTGTGGCAATGCCAGCAGAATATTCATCATAACTTACAAATAATCAAACTTTTGAGTCAATATACAAATGACTCTTCGAATTCGAAATTCTATGGATTTGAATTTCGTTAAAACATGTTGTGCTTGCTCGTTCAATGTATTTTCTAAATTTGAGAAAGTGGCTTTCGTTTTGTTTTTAAACTGATTGTGTATTTGATTTTGGTTATTGATTCATTCAGCCAGCATTGTCAATTGGGAATGTGGGGCAGTTAGCAGTGGACCTGTTGGTTTCCACAATGAGGGCAACAAGAATTGGTTATTTGGATGACCCTTTTGTTCTGCCTTGTATTGGTAATAATGCTTATGAGCCATTTCCCCATGGGGAGATTGCCCTCCCTCTTGAAGGTCTGTCTTGCTTGGTAGTAATTTATTTTTAAAATTTCTTGAAGTGGTATTGGAATTTGTAATATCAACACTAGCTTTGTTATATCGATTTCTTCTGTCTTCTGGTAACTCGAGTTTATGCATTTAACTTTTTTTTTTTTTTTAATTGGTTTTCAGTTTATGAATCAACATCTAATGCAGTGACCCTTGTCCAGCAAAGGTCACCTGTTATCAAGGCAAGTTTCAACAGCCCAGTCGTATTTACATATTTTATCACAATTGGCCATGTACTTTTGCTTACTCGTTCTTTTCACCAATTGTGTGTAAAAAGTATATAATGCCTGAACTTATAAAAGAGGTATATAGTGCCTTCTGGCTAATTTCTGCAGAAATTCATAAACAAGTATCGTACTGTTTCTTGAGTAATGTTTGTATCATCTCAAAGTATAAATTTACCTTTAGAAGGCAGTTCCAGTATCGCCAGTCCGATTAAGACTTAAGAGAGAGAACATAGCAAGGGAGATATACTAGTCTAGTGTTATCCCTTTTTTGTTATCTCGAGGAGATGATAGTACTGCTCTTCGGTTTGTGAACTTCTTTTCTTTGCGTTGGTGGCATCAATAATTAGTATTTTTAAATTGAATTGTGATTTGTTCAAGCAGGGGAAAATGGTCGATTTTGCAAAGAACTTGGCTGATTTTATTGCAACTTATGGGAAGATGCATGTTGTTCTGCTTTCTAGCTTAGATTTTGGAAGGTGGCAACAAATTGATACGTCAAGGTATTTATTTGGTACCTCTTTTAACATTTTCCAGTCGCAGAATCTTATTTAGTCTCGTAAGGCAATGAAACATTATTTCATAAACCGAAGTAACTCCCACCATAAATATCTAAGCCTTGTCTTATAGGGCTATGATTCTAGGGCTGTACATTAATTCGGCTGGATGGTTTGCCAAAACTATTATCTTCCCAAAGTTACTTGTAAAATACTTGAATTCCATTGCTTGTCCTTTGCATACAGCAAGCCTGACCAATTAACTGTCATTTCATGGTTATTAATTTGGCCTTTTGATGCATATCAGTGGCTCGCAGATTCATTATCTTTCTAGCACCAATGATGACGGAACTGATGACAAGTGTGAACAAATGGGATGGAGAAGGCTGCAGGAATACGACCCACAGCAGCGACGATGGAAATATCTTAGCACGTTAACTGAAGCCAAGGCTACCCCGGAGGATGACCTGCCTTTTGATGAGGAGTTGGAGGAGGGAGACTACCTCCCAAGTCTACCATTTGCCTCTCTCTTTACTTTTTTGAAGGTACAACCTTGAAATAACATCATCATCAGACGTTAGACATGAAATATTTCTTCAAAATTTTCTAATGCCCGTTATGTTTGCTGTGGTGTCAAGGCCAAAGGTGTGAAGGTCACCTGCTTATTCTGTTATTGTTCAGAAGGAGACAACATAGCTGATGCTTTCAATTTGGCTGAGGCAACGGGCAAACTTCTGGGTCTGAGTCCTGGTAATCTCATGGCTTCACCTGCCTTGTTTTTAAAACTGATATATCATTAATCGGCATGAGTCATCTTTACTTATATTGTGAGATCCACATTGGTTGGGAAGAGGAACAAAACACCCTTTATAAGGGTGTAGAAACCTATCCCTAGCAGACGTGTTTTAAAACCGTGAGGCTGACGACAATACGTAATGAGCCAAAACGAACAATATCTGCTAGCAGTGGGCTTGAGTTGTTACATACATAATCATTTTGTAATTCTGAAAGCTATGGTTTGCACTGATCAACCGAGTATAGCTCAAATGGTTTAGACATAAACTCTTGGCAAAAAGGTCAGACGTTCGAATTTCGCCAACCCCAGATGTCGTTGAGTTAAAAAAATGTGATTTGTGAAGTATTCCTTGTTATCTCTCTTTATCCCTTTTGAACATACTTTCCTAAACAGCGGGCTTTCTGGAAGCTTTGTTTCTGTGTTTCAAACATAACAAGAAGGGTTTTGCGGAATCTTAACTACATCTCTTCTGATTTTGTATTCAGGTGGCGAAGGCATTCAATGGCAAGTCCCGTTTTCTTGGAAGTCTGTTTATGGACCACCGCCAGATCTGTCCATCTTCTAGACAAGGATGGGTAGAATGAATCACAAAGTGCCAGTTGAAGAAATTGATCTGTAAAGAAGAAATGAAAGAACAGGTGAATGCTTCTCCCTTTTTGGTTAACTATTCTACTTTAATCCATTTGAAATCAGAATTTTTCTGTCTTGGAGTTGTATATTCATACACTAATTGCAGTTCTAAACGTATTTTAGATAAAATACTGATGAAATTTGTACTTTTCTTAGCCACTTAATTGTTACAAATATATGTACTTCTAAACTTGTTATCGATCCAACTTATTTGACTCTTTCT TGAAATTCTCAAAATTAAGAGTGTTTGTCCCGCCGGATTCCGTGGTTTTTTCTACGACAATGGAATTTTTTCTCGAAGAAGGAAAGCAAGTTCATGGCAAGAGCTCCACTCTGATTCTGCCAGCATTGTCAATTGGGAATGTGGGGCAGTTAGCAGTGGACCTGTTGGTTTCCACAATGAGGGCAACAAGAATTGGTTATTTGGATGACCCTTTTGTTCTGCCTTGTATTGGTAATAATGCTTATGAGCCATTTCCCCATGGGGAGATTGCCCTCCCTCTTGAAGTTTATGAATCAACATCTAATGCAGTGACCCTTGTCCAGCAAAGGTCACCTGTTATCAAGGGGAAAATGGTCGATTTTGCAAAGAACTTGGCTGATTTTATTGCAACTTATGGGAAGATGCATGTTGTTCTGCTTTCTAGCTTAGATTTTGGAAGGTGGCAACAAATTGATACGTCAAGTGGCTCGCAGATTCATTATCTTTCTAGCACCAATGATGACGGAACTGATGACAAGTGTGAACAAATGGGATGGAGAAGGCTGCAGGAATACGACCCACAGCAGCGACGATGGAAATATCTTAGCACGTTAACTGAAGCCAAGGCTACCCCGGAGGATGACCTGCCTTTTGATGAGGAGTTGGAGGAGGGAGACTACCTCCCAAGTCTACCATTTGCCTCTCTCTTTACTTTTTTGAAGGCCAAAGGTGTGAAGGTCACCTGCTTATTCTGTTATTGTTCAGAAGGAGACAACATAGCTGATGCTTTCAATTTGGCTGAGGCAACGGGCAAACTTCTGGGTCTGAGTCCTGGTGGCGAAGGCATTCAATGGCAAGTCCCGTTTTCTTGGAAGTCTGTTTATGGACCACCGCCAGATCTGTCCATCTTCTAGACAAGGATGGGTAGAATGAATCACAAAGTGCCAGTTGAAGAAATTGATCTGTAAAGAAGAAATGAAAGAACAGGTGAATGCTTCTCCCTTTTTGGTTAACTATTCTACTTTAATCCATTTGAAATCAGAATTTTTCTGTCTTGGAGTTGTATATTCATACACTAATTGCAGTTCTAAACGTATTTTAGATAAAATACTGATGAAATTTGTACTTTTCTTAGCCACTTAATTGTTACAAATATATGTACTTCTAAACTTGTTATCGATCCAACTTATTTGACTCTTTCT ATGGAATTTTTTCTCGAAGAAGGAAAGCAAGTTCATGGCAAGAGCTCCACTCTGATTCTGCCAGCATTGTCAATTGGGAATGTGGGGCAGTTAGCAGTGGACCTGTTGGTTTCCACAATGAGGGCAACAAGAATTGGTTATTTGGATGACCCTTTTGTTCTGCCTTGTATTGGTAATAATGCTTATGAGCCATTTCCCCATGGGGAGATTGCCCTCCCTCTTGAAGTTTATGAATCAACATCTAATGCAGTGACCCTTGTCCAGCAAAGGTCACCTGTTATCAAGGGGAAAATGGTCGATTTTGCAAAGAACTTGGCTGATTTTATTGCAACTTATGGGAAGATGCATGTTGTTCTGCTTTCTAGCTTAGATTTTGGAAGGTGGCAACAAATTGATACGTCAAGTGGCTCGCAGATTCATTATCTTTCTAGCACCAATGATGACGGAACTGATGACAAGTGTGAACAAATGGGATGGAGAAGGCTGCAGGAATACGACCCACAGCAGCGACGATGGAAATATCTTAGCACGTTAACTGAAGCCAAGGCTACCCCGGAGGATGACCTGCCTTTTGATGAGGAGTTGGAGGAGGGAGACTACCTCCCAAGTCTACCATTTGCCTCTCTCTTTACTTTTTTGAAGGCCAAAGGTGTGAAGGTCACCTGCTTATTCTGTTATTGTTCAGAAGGAGACAACATAGCTGATGCTTTCAATTTGGCTGAGGCAACGGGCAAACTTCTGGGTCTGAGTCCTGGTGGCGAAGGCATTCAATGGCAAGTCCCGTTTTCTTGGAAGTCTGTTTATGGACCACCGCCAGATCTGTCCATCTTCTAG
BLAST of CmoCh19G006530 vs. Swiss-Prot
Match: PSMG2_DANRE (Proteasome assembly chaperone 2 OS=Danio rerio GN=psmg2 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.9e-27 Identity = 87/274 (31.75%), Postives = 134/274 (48.91%), Query Frame = 1
BLAST of CmoCh19G006530 vs. Swiss-Prot
Match: PSMG2_NEMVE (Proteasome assembly chaperone 2 OS=Nematostella vectensis GN=psmg2 PE=3 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26 Identity = 82/229 (35.81%), Postives = 124/229 (54.15%), Query Frame = 1
BLAST of CmoCh19G006530 vs. Swiss-Prot
Match: PSMG2_BOVIN (Proteasome assembly chaperone 2 OS=Bos taurus GN=PSMG2 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 8.4e-23 Identity = 73/272 (26.84%), Postives = 123/272 (45.22%), Query Frame = 1
BLAST of CmoCh19G006530 vs. Swiss-Prot
Match: PSMG2_HUMAN (Proteasome assembly chaperone 2 OS=Homo sapiens GN=PSMG2 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.4e-22 Identity = 76/269 (28.25%), Postives = 128/269 (47.58%), Query Frame = 1
BLAST of CmoCh19G006530 vs. Swiss-Prot
Match: PSMG2_DICDI (Proteasome assembly chaperone 2 OS=Dictyostelium discoideum GN=psmG2 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.9e-22 Identity = 76/275 (27.64%), Postives = 138/275 (50.18%), Query Frame = 1
BLAST of CmoCh19G006530 vs. TrEMBL
Match: A0A0A0K3C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075580 PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 2.5e-138 Identity = 244/277 (88.09%), Postives = 253/277 (91.34%), Query Frame = 1
BLAST of CmoCh19G006530 vs. TrEMBL
Match: B9RZF3_RICCO (Proteasome assembly chaperone 2 OS=Ricinus communis GN=RCOM_0938830 PE=3 SV=1) HSP 1 Score: 416.4 bits (1069), Expect = 2.7e-113 Identity = 195/281 (69.40%), Postives = 234/281 (83.27%), Query Frame = 1
BLAST of CmoCh19G006530 vs. TrEMBL
Match: A0A0B0MM71_GOSAR (Proteasome assembly chaperone 2 OS=Gossypium arboreum GN=F383_07987 PE=3 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 2.6e-111 Identity = 196/281 (69.75%), Postives = 232/281 (82.56%), Query Frame = 1
BLAST of CmoCh19G006530 vs. TrEMBL
Match: A0A067LFY5_JATCU (Proteasome assembly chaperone 2 OS=Jatropha curcas GN=JCGZ_10033 PE=3 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 2.6e-111 Identity = 197/281 (70.11%), Postives = 233/281 (82.92%), Query Frame = 1
BLAST of CmoCh19G006530 vs. TrEMBL
Match: A5B3E8_VITVI (Proteasome assembly chaperone 2 OS=Vitis vinifera GN=VITISV_023239 PE=3 SV=1) HSP 1 Score: 407.9 bits (1047), Expect = 9.8e-111 Identity = 194/282 (68.79%), Postives = 231/282 (81.91%), Query Frame = 1
BLAST of CmoCh19G006530 vs. TAIR10
Match: AT3G18940.1 (AT3G18940.1 clast3-related) HSP 1 Score: 360.1 bits (923), Expect = 1.2e-99 Identity = 174/281 (61.92%), Postives = 220/281 (78.29%), Query Frame = 1
BLAST of CmoCh19G006530 vs. NCBI nr
Match: gi|449438454|ref|XP_004137003.1| (PREDICTED: proteasome assembly chaperone 2 [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 3.5e-138 Identity = 244/277 (88.09%), Postives = 253/277 (91.34%), Query Frame = 1
BLAST of CmoCh19G006530 vs. NCBI nr
Match: gi|700188745|gb|KGN43978.1| (hypothetical protein Csa_7G075580 [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 3.5e-138 Identity = 244/277 (88.09%), Postives = 253/277 (91.34%), Query Frame = 1
BLAST of CmoCh19G006530 vs. NCBI nr
Match: gi|659109799|ref|XP_008454887.1| (PREDICTED: proteasome assembly chaperone 2 [Cucumis melo]) HSP 1 Score: 495.7 bits (1275), Expect = 5.1e-137 Identity = 240/277 (86.64%), Postives = 253/277 (91.34%), Query Frame = 1
BLAST of CmoCh19G006530 vs. NCBI nr
Match: gi|255556175|ref|XP_002519122.1| (PREDICTED: proteasome assembly chaperone 2 [Ricinus communis]) HSP 1 Score: 416.4 bits (1069), Expect = 3.9e-113 Identity = 195/281 (69.40%), Postives = 234/281 (83.27%), Query Frame = 1
BLAST of CmoCh19G006530 vs. NCBI nr
Match: gi|802538969|ref|XP_012069292.1| (PREDICTED: proteasome assembly chaperone 2 [Jatropha curcas]) HSP 1 Score: 409.8 bits (1052), Expect = 3.7e-111 Identity = 197/281 (70.11%), Postives = 233/281 (82.92%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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