CmaCh19G006400 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAAACCTCCACGACGGAGCACTGTGAAATTCTCAAAATTAAGTGTTTGGCCCGCCGGATTTCGTGGTGTTTTCTACGACAATGGAATTTTTTCTCGAAGAAGGAAAGCAAGTTCATGGCAAGAGCTCCACTCTGATTCTGGTTCGTTCTTTTCTGAGCTTCTTCTTCTTTTCATCGTTTTGCCTTTCTATCAATTAATCAATCTAGCAGAAGATTTTTGCATCGTATTAGCTTCGAGTGGTTTGAATGTTTATGAAATTCCTAGAAAATAGGAAGGAAAATGGAAATCTAATTCGGCTTGCTATTAATTGTTCATAGAGCTCGAAAGGAGGGTGAAGGTTTATGTGGCTGATTGTGTTAATAAGCCAAATAGTTAATCTTCTGCTACTGTTGTGATTTGATGAGTTTTTTAGTTTATATTCCTCTTAACACGACGAGAATTTTTGTTGTGTTTCTACAATAAGTTGTTACTTGCAGGCATTGCCCATTCATGGAAGGGCATGTGTTCATGTAATTTGGTCCTACCATCCCTTTAGCCCAGCCCTTTCCTGTCAAACTTGACCAGAAGACTTATATGGTCTGGAATAATCATGTCATGGTCTTGAACATGTGATAAACAGAACCCACTCAAGCTGATTCTGAAGAACAGCCTGAGCAATGATGAGTATCATGTGTATGGTTTATATTCATGACCTCGTAGCCGGCATTTATTTCCTCGCCTAGGTAGCTAACTACTTACAAAACCCATTTCCTTTTTTGCCTTATCTTGCATAATCATTTACAATTGGAGGCCTAATAGATGGTGACATGTACGGAAGGTGCCATTTGAGGATTGTGGATTTTCTTCTGGAACTGAAATATGGATGCATTGTTGAGAAAATAAGAATTAACTATACCAGCTTTCAACTATTGAACTAAGGAACAGCTACACAGTTCTCGAAGGGCAGCATGGCTAGCATATCTAGGCAGAAGCAATGACATAGCAAATGAGTTGGAGGCAATTGGTGAAATTTTTACTACTACAGGCCGTCTAAGATATCTTGGAAGTTTTGACAAGCAATTTCTTGGATGCATAAGTAGCCCACATATAAGTTATGCATTTGGATTGGAGAATAAAAATTTGGAGTTAAGTTGCAGCTTGCTGGAACCAAATTGATGAGCTTTCTAATATAAAGGTCCAGAAAGTTCAATTGAACATTTTCCAGAAACTCAAAGAAATTTTAGATTTGTAGAAAACTAGGCCAGTCAGTAATATTCTACTACGATCACGTTTATCTTAACTATCAGCCTTGGAATCACAATATTCCTGCCCATTTTACCATTTTAAGTCGTGGACACTACAGATTGTATGTATGTTATAGACCCAGCTGTCTCCTCAATTCATAAAGAAAAAAACTGGGTAGTGGGCATTCCTTAACTCTCAAGAGCCCCATCGTGGTGCTAACAGGGTTGATGTTGGAAACTGTATCTTTATAATGTTGGTAATGCTCAACTCCCAACTCCCCTTTAACAATCTATCTTTGTAACTCATTTGGGAGTTTACAGAATTTTTTTTAGTGTTAGTTTAACCATCTTTGTATTTGAGTGTTTTCTTTGTTAGGGAACTTCCACCAAGAGAGTCTTGACGATGACCTCTATTCCACCTAACTCCTCCACCAATATGAATAAAGTACTTCCTTATGGCCTAGTGGACCTCGTCACAATACATTTCTAGTCAAGTTTTTTATGTAAATTTGTGGCAATGCCACCAGAATATTCATCATAACTTATAAATAATCAAACTTTTGAATCAATATACCAATGACTCTTCGAATTCGAAATTCTTTGAATTTGAATTTCGTTAAACATGTTGTGCTTGCTCGTTCAATGTATTTTCTAAACTTCAGAAAGTGGCTATCCTTTTGTTTTTAAACTAATTGTGTATTTTATTTTGGTTATTGATTCATTCAGCCAGCATTGTCAATTGGGAATGTGGGGCAGTTAGCAGTGGACCTGTTGGTTTCCACAATGAGTGCAACAAGAATTGGTTATTTGGATGACCCTTTTGTTCTGCCTTGTATTGGTAATAATGCTTATGAGCCATTTCCCCATGGGGAGCTTGCCCTCCCTCTTGAAGGTCTGTCTTGCTTGGTAGTAATTTATTTTTAAAATTTCTTGAAGTGGTATTGGAATTTGTAATATCAACACTAGCTTTGTTATATCGATTTCTTCTGTCTTCTGGTAACTCGAGTTTATGCATTAACTTTTTTTTTTTTTTTTTTAAATTGGTTTCAGTTTATGAATCAACATCTAATGCAGTGACCCTTGTCCAGCAAAGGTCACCTGTTATCAAGGCAAGTTTCAACACCCCAGTCGTATTTACATATTTTATCACAATTGGCCATGTACTTTTGCTTACTCGTTCTTTTCACCAATTGTGTGTAAAAAGTATATAATGCCTGAACTTATAAAAGAGCTATATAGTGCCTTCTGGCTAATTTCTGCAGAATTTCATAAACAAGTATCGTACTGTATCTTGAGTAATGGTTGTATCATCTCAAAGTATAAATTTACCTTTAGAAGGCAGTTCAAGTATCGCCAGTCCAATTAAGATTTCAGAGAGAGAACATAGCAAGGGAGATATACTAGTCTAGTGTTATCCCTTTTTTGTTATCTCGAGGAGATGATAGTACTGCTCTTCGGTTTGTGAACTTCTTTTCTTTGCGTTGGTGGCATCAATAATTAGTATTTTTAAATTGAATTGTGATTTGTTCAAGCAGGGGAAAATGGTCGATTTTGCAAAGAACTTGGCTGATTTTATTGCAACTTATGGGAAGATGCATGTTGTTCTGCTTTCTAGCTTAGATTTTGGAAGGTGGCAACAAATTGATACGTCAAGGTATTTTTTTGGTACCTCTTTTAACATTTTCCAGTCGCAGAATCTTATTTAGTCTCGTAAGGCAATGAAGCATTATTTCATAAACCGAAGTAACTCCCACCATAAATATCTAAGCCTTGTCTTGTAGGACTATGATTCTAGGACTGTACATTAATTCGGCTGGATGGTTTGCCAAAACTATTATCTTCCCAAAGTTACTTGTAAAATACTTGAATTCCATTGCTTGTTCTTTGCATACAGCAAGCCTGACCAATTAACTGTCATTCCATGGTTATTAATTTGGTCTTTTGATGCATATCAGTGGCTCGCAGATTCATTATCTTTCTAGCACCAATGATGACGGAACTGATGACAAGTGTGAACAAATGGGATGGAGAAGGCTGCAGGAATACGACCCACAGCAGCGACGATGGAAATATCTTAGCACGTTAACTGAAGCCAAGGCTACCCCGGAGGATGACCTGCCTTTTGATGAGGAGTTGGAGGAGGGAGACTACCTCCCAAGTCTACCATTTGCCTCTCTCTTTACTTTTTTGAAGGTACAACCTTGAAATAACATCATCATCAGACGTCAGACATTAAATTTTTCTTCAAAATTTTCTAATGGCACTTATGTTTGTTGTGGTGTCAAGGCCAAAGGTGTGAAGGTCACCTGCTTATTTTGTTATTGTTCAGAAGGAGACAACATAGCTGATGCTTTCAATTTGGCTGAGGCAACGGGCAAACTTCTGGGTCTGAGTCCCGGTAATCTCATGGCTTCACCTGCCAATGTTTTTAAATCTGATATATCATTAGTTGGCATGAGTCATCTTTACTTATACTGTGAGATCCCACATCGGTTGGGAGGAGAACCAAACACCCTTTATAAGGGTGTGGAAACTTATACCTAGCAGATGTGTTTTAAAACTGTGAGGCTGACGGTGATACATAACGGGCCATAGCGTGGGCTTGAGCGGTTACATATATATCTTTAAGGTCCATCTCTTGGGTTTTCTTTCCAACATAACTGACGTGGTGGCATTATATTTCTACCTGCTTATTACATTATACATAATCATTTTGTAATTTTGAAAACTATGTTTTGCACTGATCAACCTAGCTCAAAAGGTTTAGACATAAACTCTTGGCAAAGAGGTCAAACGTTCGAATTACCCCAACCCCACATGTTGTTGAGTTAAAAAAAAAATGTGATTTGTGAAGTATTCCTTGTTATCTCTCTTTATCCCTTTTGAACATACTTTCCTAAACGGCGGGCTTTTTGGAAGCTTTCTTTCTGTGTTTCAAACATAATAAGAAGGGTTTTGTGGAATCTTAACTACTGATGTTTGCTGTAAAACCTTTGTGTCACATCTCTTCTGATTTTGTATTCAGGTGGCGAAGGCATTCAATGGCAAGTCCCGTTTTCTTGGAAGTCTGTTTATGGACCACCGCCAGATCTGTCCATCTTCTAGACAAGGATGGGTAGAATGAATCACAAGTGCCCAGTTGAAGAAATTGATCTGTAAAGAAGAAATGAAAGGACCTCTCAACCATAACAGGTGAATGCTTCTCCCCTTTTGGTTAACTATTCTACTTCAATCCATTTGAAATCAGAAATTTTCTGTCTTGGAGTCGTATATTCATACAGTAATTGCAGTTCTAAACGTATTTTAGATAAAATGTTGATTAAATCTGTACTTTTCTTAACCACGTATCAGAAATTTTATGTCTTGGATTCTTTGTGTGGCGAAATGTTCATTTAACCTATCGAGGAAGGCAGTGGAGAGAAATTTCTTTTTGTTAGCTAAACAGGACTGGACTAGGGACGGGGATAGTATGTTAGAAATGGTAAGGACATGTTAGATGCACGATTGAAGTTCAAAAACTTATTAAATACAACGTCG AAGAAAACCTCCACGACGGAGCACTGTGAAATTCTCAAAATTAAGTGTTTGGCCCGCCGGATTTCGTGGTGTTTTCTACGACAATGGAATTTTTTCTCGAAGAAGGAAAGCAAGTTCATGGCAAGAGCTCCACTCTGATTCTGCCAGCATTGTCAATTGGGAATGTGGGGCAGTTAGCAGTGGACCTGTTGGTTTCCACAATGAGTGCAACAAGAATTGGTTATTTGGATGACCCTTTTGTTCTGCCTTGTATTGGTAATAATGCTTATGAGCCATTTCCCCATGGGGAGCTTGCCCTCCCTCTTGAAGTTTATGAATCAACATCTAATGCAGTGACCCTTGTCCAGCAAAGGTCACCTGTTATCAAGGGGAAAATGGTCGATTTTGCAAAGAACTTGGCTGATTTTATTGCAACTTATGGGAAGATGCATGTTGTTCTGCTTTCTAGCTTAGATTTTGGAAGGTGGCAACAAATTGATACGTCAAGTGGCTCGCAGATTCATTATCTTTCTAGCACCAATGATGACGGAACTGATGACAAGTGTGAACAAATGGGATGGAGAAGGCTGCAGGAATACGACCCACAGCAGCGACGATGGAAATATCTTAGCACGTTAACTGAAGCCAAGGCTACCCCGGAGGATGACCTGCCTTTTGATGAGGAGTTGGAGGAGGGAGACTACCTCCCAAGTCTACCATTTGCCTCTCTCTTTACTTTTTTGAAGGCCAAAGGTGTGAAGGTCACCTGCTTATTTTGTTATTGTTCAGAAGGAGACAACATAGCTGATGCTTTCAATTTGGCTGAGGCAACGGGCAAACTTCTGGGTCTGAGTCCCGGTGGCGAAGGCATTCAATGGCAAGTCCCGTTTTCTTGGAAGTCTGTTTATGGACCACCGCCAGATCTGTCCATCTTCTAGACAAGGATGGGTAGAATGAATCACAAGTGCCCAGTTGAAGAAATTGATCTGTAAAGAAGAAATGAAAGGACCTCTCAACCATAACAGGTGAATGCTTCTCCCCTTTTGGTTAACTATTCTACTTCAATCCATTTGAAATCAGAAATTTTCTGTCTTGGAGTCGTATATTCATACAGTAATTGCAGTTCTAAACGTATTTTAGATAAAATGTTGATTAAATCTGTACTTTTCTTAACCACGTATCAGAAATTTTATGTCTTGGATTCTTTGTGTGGCGAAATGTTCATTTAACCTATCGAGGAAGGCAGTGGAGAGAAATTTCTTTTTGTTAGCTAAACAGGACTGGACTAGGGACGGGGATAGTATGTTAGAAATGGTAAGGACATGTTAGATGCACGATTGAAGTTCAAAAACTTATTAAATACAACGTCG ATGGAATTTTTTCTCGAAGAAGGAAAGCAAGTTCATGGCAAGAGCTCCACTCTGATTCTGCCAGCATTGTCAATTGGGAATGTGGGGCAGTTAGCAGTGGACCTGTTGGTTTCCACAATGAGTGCAACAAGAATTGGTTATTTGGATGACCCTTTTGTTCTGCCTTGTATTGGTAATAATGCTTATGAGCCATTTCCCCATGGGGAGCTTGCCCTCCCTCTTGAAGTTTATGAATCAACATCTAATGCAGTGACCCTTGTCCAGCAAAGGTCACCTGTTATCAAGGGGAAAATGGTCGATTTTGCAAAGAACTTGGCTGATTTTATTGCAACTTATGGGAAGATGCATGTTGTTCTGCTTTCTAGCTTAGATTTTGGAAGGTGGCAACAAATTGATACGTCAAGTGGCTCGCAGATTCATTATCTTTCTAGCACCAATGATGACGGAACTGATGACAAGTGTGAACAAATGGGATGGAGAAGGCTGCAGGAATACGACCCACAGCAGCGACGATGGAAATATCTTAGCACGTTAACTGAAGCCAAGGCTACCCCGGAGGATGACCTGCCTTTTGATGAGGAGTTGGAGGAGGGAGACTACCTCCCAAGTCTACCATTTGCCTCTCTCTTTACTTTTTTGAAGGCCAAAGGTGTGAAGGTCACCTGCTTATTTTGTTATTGTTCAGAAGGAGACAACATAGCTGATGCTTTCAATTTGGCTGAGGCAACGGGCAAACTTCTGGGTCTGAGTCCCGGTGGCGAAGGCATTCAATGGCAAGTCCCGTTTTCTTGGAAGTCTGTTTATGGACCACCGCCAGATCTGTCCATCTTCTAG MEFFLEEGKQVHGKSSTLILPALSIGNVGQLAVDLLVSTMSATRIGYLDDPFVLPCIGNNAYEPFPHGELALPLEVYESTSNAVTLVQQRSPVIKGKMVDFAKNLADFIATYGKMHVVLLSSLDFGRWQQIDTSSGSQIHYLSSTNDDGTDDKCEQMGWRRLQEYDPQQRRWKYLSTLTEAKATPEDDLPFDEELEEGDYLPSLPFASLFTFLKAKGVKVTCLFCYCSEGDNIADAFNLAEATGKLLGLSPGGEGIQWQVPFSWKSVYGPPPDLSIF
BLAST of CmaCh19G006400 vs. Swiss-Prot
Match: PSMG2_DANRE (Proteasome assembly chaperone 2 OS=Danio rerio GN=psmg2 PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.1e-27 Identity = 88/274 (32.12%), Postives = 135/274 (49.27%), Query Frame = 1
BLAST of CmaCh19G006400 vs. Swiss-Prot
Match: PSMG2_NEMVE (Proteasome assembly chaperone 2 OS=Nematostella vectensis GN=psmg2 PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.3e-27 Identity = 84/229 (36.68%), Postives = 125/229 (54.59%), Query Frame = 1
BLAST of CmaCh19G006400 vs. Swiss-Prot
Match: PSMG2_BOVIN (Proteasome assembly chaperone 2 OS=Bos taurus GN=PSMG2 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 6.5e-23 Identity = 74/272 (27.21%), Postives = 124/272 (45.59%), Query Frame = 1
BLAST of CmaCh19G006400 vs. Swiss-Prot
Match: PSMG2_HUMAN (Proteasome assembly chaperone 2 OS=Homo sapiens GN=PSMG2 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.1e-22 Identity = 77/269 (28.62%), Postives = 129/269 (47.96%), Query Frame = 1
BLAST of CmaCh19G006400 vs. Swiss-Prot
Match: PSMG2_DICDI (Proteasome assembly chaperone 2 OS=Dictyostelium discoideum GN=psmG2 PE=3 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.5e-22 Identity = 76/275 (27.64%), Postives = 138/275 (50.18%), Query Frame = 1
BLAST of CmaCh19G006400 vs. TrEMBL
Match: A0A0A0K3C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G075580 PE=4 SV=1) HSP 1 Score: 497.3 bits (1279), Expect = 1.2e-137 Identity = 244/277 (88.09%), Postives = 252/277 (90.97%), Query Frame = 1
BLAST of CmaCh19G006400 vs. TrEMBL
Match: B9RZF3_RICCO (Proteasome assembly chaperone 2 OS=Ricinus communis GN=RCOM_0938830 PE=3 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 4.7e-113 Identity = 196/281 (69.75%), Postives = 233/281 (82.92%), Query Frame = 1
BLAST of CmaCh19G006400 vs. TrEMBL
Match: A0A067LFY5_JATCU (Proteasome assembly chaperone 2 OS=Jatropha curcas GN=JCGZ_10033 PE=3 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 4.4e-111 Identity = 198/281 (70.46%), Postives = 232/281 (82.56%), Query Frame = 1
BLAST of CmaCh19G006400 vs. TrEMBL
Match: A0A0B0MM71_GOSAR (Proteasome assembly chaperone 2 OS=Gossypium arboreum GN=F383_07987 PE=3 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 4.4e-111 Identity = 197/281 (70.11%), Postives = 231/281 (82.21%), Query Frame = 1
BLAST of CmaCh19G006400 vs. TrEMBL
Match: A0A0D2RTK8_GOSRA (Proteasome assembly chaperone 2 OS=Gossypium raimondii GN=B456_005G263900 PE=3 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 3.7e-110 Identity = 196/281 (69.75%), Postives = 229/281 (81.49%), Query Frame = 1
BLAST of CmaCh19G006400 vs. TAIR10
Match: AT3G18940.1 (AT3G18940.1 clast3-related) HSP 1 Score: 359.4 bits (921), Expect = 2.0e-99 Identity = 173/281 (61.57%), Postives = 220/281 (78.29%), Query Frame = 1
BLAST of CmaCh19G006400 vs. NCBI nr
Match: gi|449438454|ref|XP_004137003.1| (PREDICTED: proteasome assembly chaperone 2 [Cucumis sativus]) HSP 1 Score: 497.3 bits (1279), Expect = 1.8e-137 Identity = 244/277 (88.09%), Postives = 252/277 (90.97%), Query Frame = 1
BLAST of CmaCh19G006400 vs. NCBI nr
Match: gi|700188745|gb|KGN43978.1| (hypothetical protein Csa_7G075580 [Cucumis sativus]) HSP 1 Score: 497.3 bits (1279), Expect = 1.8e-137 Identity = 244/277 (88.09%), Postives = 252/277 (90.97%), Query Frame = 1
BLAST of CmaCh19G006400 vs. NCBI nr
Match: gi|659109799|ref|XP_008454887.1| (PREDICTED: proteasome assembly chaperone 2 [Cucumis melo]) HSP 1 Score: 493.4 bits (1269), Expect = 2.5e-136 Identity = 240/277 (86.64%), Postives = 252/277 (90.97%), Query Frame = 1
BLAST of CmaCh19G006400 vs. NCBI nr
Match: gi|255556175|ref|XP_002519122.1| (PREDICTED: proteasome assembly chaperone 2 [Ricinus communis]) HSP 1 Score: 415.6 bits (1067), Expect = 6.7e-113 Identity = 196/281 (69.75%), Postives = 233/281 (82.92%), Query Frame = 1
BLAST of CmaCh19G006400 vs. NCBI nr
Match: gi|802538969|ref|XP_012069292.1| (PREDICTED: proteasome assembly chaperone 2 [Jatropha curcas]) HSP 1 Score: 409.1 bits (1050), Expect = 6.3e-111 Identity = 198/281 (70.46%), Postives = 232/281 (82.56%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |