CmoCh19G005700 (gene) Cucurbita moschata (Rifu)

NameCmoCh19G005700
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionZinc-finger protein
LocationCmo_Chr19 : 6524730 .. 6525401 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTTGGAAGCTCTCAATTCCCCTACTTCCGCGCTCGCCCACGACCAGCTCCTCAATCATAAGCCCTTCGACCCATCAACCCATCGATCCAAGCGTTCGAAACGACTCCGGTTCGACTCTGATGATGAGTACTTCGCCTTTTGCCTTCTCCTTCTAGCCCGTGGAAGAATCCCAGATTCTGACACTAATAATAAGCCTTCCTCGTCTCCGTCTTCGTTCCCTTGTTATGCTTGTAGTGTTTGTAATAAGTCATTTTCTTCCTACCAAGCGCTTGGTGGTCATAAGGCTAGCCATCGGAAATCTGATGGCGGCGATGGTGGAGAGAAAGTCTCGGCGGCGATTACTGCCACCGTGTCTAATTCTTGTAGGACCCACCAGTGTTCCATTTGTTTTAAGTGTTTTCCCACCGGTCAGGCTCTCGGCGGCCATAAGCGACGGCACTACGACGGCGGCAGTGGTAATAATAGTAATAGCTCCAGCTTCACGCAAACCCATGTCCGGGAATTTGACCTTAACGTCCCTGCCGTGCCGGAGGTCTGGTCGAGATTTCCCGCCGGTGACCGGCGGCAAAAAAGTCAAAGTCAAAGTGAAAAACAGTACTTTGCAGAGGAAGAAGTGGCGAGCCCTCACCCGTTGAAGAAGCCGAGGATTCCGATTCCGATGGAATGA

mRNA sequence

ATGGCCTTGGAAGCTCTCAATTCCCCTACTTCCGCGCTCGCCCACGACCAGCTCCTCAATCATAAGCCCTTCGACCCATCAACCCATCGATCCAAGCGTTCGAAACGACTCCGGTTCGACTCTGATGATGAGTACTTCGCCTTTTGCCTTCTCCTTCTAGCCCGTGGAAGAATCCCAGATTCTGACACTAATAATAAGCCTTCCTCGTCTCCGTCTTCGTTCCCTTGTTATGCTTGTAGTGTTTGTAATAAGTCATTTTCTTCCTACCAAGCGCTTGGTGGTCATAAGGCTAGCCATCGGAAATCTGATGGCGGCGATGGTGGAGAGAAAGTCTCGGCGGCGATTACTGCCACCGTGTCTAATTCTTGTAGGACCCACCAGTGTTCCATTTGTTTTAAGTGTTTTCCCACCGGTCAGGCTCTCGGCGGCCATAAGCGACGGCACTACGACGGCGGCAGTGGTAATAATAGTAATAGCTCCAGCTTCACGCAAACCCATGTCCGGGAATTTGACCTTAACGTCCCTGCCGTGCCGGAGGTCTGGTCGAGATTTCCCGCCGGTGACCGGCGGCAAAAAAGTCAAAGTCAAAGTGAAAAACAGTACTTTGCAGAGGAAGAAGTGGCGAGCCCTCACCCGTTGAAGAAGCCGAGGATTCCGATTCCGATGGAATGA

Coding sequence (CDS)

ATGGCCTTGGAAGCTCTCAATTCCCCTACTTCCGCGCTCGCCCACGACCAGCTCCTCAATCATAAGCCCTTCGACCCATCAACCCATCGATCCAAGCGTTCGAAACGACTCCGGTTCGACTCTGATGATGAGTACTTCGCCTTTTGCCTTCTCCTTCTAGCCCGTGGAAGAATCCCAGATTCTGACACTAATAATAAGCCTTCCTCGTCTCCGTCTTCGTTCCCTTGTTATGCTTGTAGTGTTTGTAATAAGTCATTTTCTTCCTACCAAGCGCTTGGTGGTCATAAGGCTAGCCATCGGAAATCTGATGGCGGCGATGGTGGAGAGAAAGTCTCGGCGGCGATTACTGCCACCGTGTCTAATTCTTGTAGGACCCACCAGTGTTCCATTTGTTTTAAGTGTTTTCCCACCGGTCAGGCTCTCGGCGGCCATAAGCGACGGCACTACGACGGCGGCAGTGGTAATAATAGTAATAGCTCCAGCTTCACGCAAACCCATGTCCGGGAATTTGACCTTAACGTCCCTGCCGTGCCGGAGGTCTGGTCGAGATTTCCCGCCGGTGACCGGCGGCAAAAAAGTCAAAGTCAAAGTGAAAAACAGTACTTTGCAGAGGAAGAAGTGGCGAGCCCTCACCCGTTGAAGAAGCCGAGGATTCCGATTCCGATGGAATGA
BLAST of CmoCh19G005700 vs. Swiss-Prot
Match: ZAT10_ARATH (Zinc finger protein ZAT10 OS=Arabidopsis thaliana GN=ZAT10 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.2e-33
Identity = 104/248 (41.94%), Postives = 130/248 (52.42%), Query Frame = 1

Query: 1   MALEALNSPTSALAHDQLLNHKP-FDPSTH--RSKRSKRLRFD------SDDEYFAFCLL 60
           MALEAL SP  A     L      F    H  + KRSKR R D      +++EY AFCL+
Sbjct: 1   MALEALTSPRLASPIPPLFEDSSVFHGVEHWTKGKRSKRSRSDFHHQNLTEEEYLAFCLM 60

Query: 61  LLARGRIPDSDTNNKPSSSPSSFPCYACSVCNKSFSSYQALGGHKASHRK------SDGG 120
           LLAR      D    P         Y CSVC+K+FSSYQALGGHKASHRK      S GG
Sbjct: 61  LLAR------DNRQPPPPPAVEKLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGG 120

Query: 121 DGGEKVSAAITATVSN-SCRTHQCSICFKCFPTGQALGGHKRRHYDGGSGNNSNSSSFTQ 180
           D     SA  T+ V+  S ++H C+IC K FP+GQALGGHKR HY+G +  N++S S ++
Sbjct: 121 DDHSTSSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHKRCHYEGNNNINTSSVSNSE 180

Query: 181 -----THV----REFDLNVPAVPEVWSRFPAGDRRQKSQSQSEKQYFAEEEVASPHPLKK 224
                +HV    R FDLN+P +PE                        ++EV SP P KK
Sbjct: 181 GAGSTSHVSSSHRGFDLNIPPIPEF------------------SMVNGDDEVMSPMPAKK 224

BLAST of CmoCh19G005700 vs. Swiss-Prot
Match: ZAT6_ARATH (Zinc finger protein ZAT6 OS=Arabidopsis thaliana GN=ZAT6 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.6e-32
Identity = 104/253 (41.11%), Postives = 123/253 (48.62%), Query Frame = 1

Query: 1   MALEALNSPTSALAHDQLLNHKPFDPSTHRSKRSKRLRFDSD------DEYFAFCLLLLA 60
           MALE L SP  +     L           + KRSKR R + D      DEY A CL+LLA
Sbjct: 1   MALETLTSPRLSSPMPTLFQDSALGFHGSKGKRSKRSRSEFDRQSLTEDEYIALCLMLLA 60

Query: 61  RGRIPDSDTNNKPSSS------PSSFPCYACSVCNKSFSSYQALGGHKASHRK------S 120
           R    + D +   SSS      P   P Y CSVC+K+FSSYQALGGHKASHRK      S
Sbjct: 61  RDGDRNRDLDLPSSSSSPPLLPPLPTPIYKCSVCDKAFSSYQALGGHKASHRKSFSLTQS 120

Query: 121 DGGDGGEKVSAAITATVS----NSCRTHQCSICFKCFPTGQALGGHKRRHYDGGSGNNSN 180
            GGD     SA  T+ +S     S ++H CSIC K F TGQALGGHKR HY+G +G   +
Sbjct: 121 AGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQALGGHKRCHYEGKNGGGVS 180

Query: 181 SS----------SFTQTHVREFDLNVPAVPEVWSRFPAGDRRQKSQSQSEKQYFAEEEVA 222
           SS          S   +  R FDLN+P +PE                        +EEV 
Sbjct: 181 SSVSNSEDVGSTSHVSSGHRGFDLNIPPIPEF------------------SMVNGDEEVM 235

BLAST of CmoCh19G005700 vs. Swiss-Prot
Match: AZF3_ARATH (Zinc finger protein AZF3 OS=Arabidopsis thaliana GN=AZF3 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.7e-30
Identity = 95/228 (41.67%), Postives = 121/228 (53.07%), Query Frame = 1

Query: 1   MALEALNSPTSALAHDQLLNHKPFDPSTHRSKRSKRLRFD-------SDDEYFAFCLLLL 60
           MALEALNSP   L  D L      +  T   KRSKR R D       +++EY AFCL+LL
Sbjct: 1   MALEALNSPR--LVEDPL-RFNGVEQWTKCKKRSKRSRSDLHHNHRLTEEEYLAFCLMLL 60

Query: 61  ARGRIPDSDTNNKPSSSPSSFPCYACSVCNKSFSSYQALGGHKASHRKSDGGDGGEKVSA 120
           AR      D  +  S + +  P Y C VC K+FSSYQALGGHKASHR   GG   +K   
Sbjct: 61  AR------DGGDLDSVTVAEKPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDK--- 120

Query: 121 AITATVSNSCRTHQCSICFKCFPTGQALGGHKRRHYDGGSGNN---SNSSSFTQTHVREF 180
              +T S + ++H CS+C K F TGQALGGHKR HYDGG  N+    ++S  + +  R F
Sbjct: 121 ---STPSTAVKSHVCSVCGKSFATGQALGGHKRCHYDGGVSNSEGVGSTSHVSSSSHRGF 180

Query: 181 DLNVPAVPEVWSRFPAGDRRQKSQSQSEKQYFAEEEVASPHPLKKPRI 219
           DLN+  V                     + +  ++EV SP   KKPR+
Sbjct: 181 DLNIIPV---------------------QGFSPDDEVMSPMATKKPRL 192

BLAST of CmoCh19G005700 vs. Swiss-Prot
Match: AZF1_ARATH (Zinc finger protein AZF1 OS=Arabidopsis thaliana GN=AZF1 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.7e-29
Identity = 95/237 (40.08%), Postives = 114/237 (48.10%), Query Frame = 1

Query: 1   MALEALNSPTSALAHDQLLNHKP-FDPST----HRSKRSKRLRFD-------------SD 60
           MALE LNSPT+      LL ++   +P       + KR+KR RFD             S+
Sbjct: 1   MALETLNSPTATTTARPLLRYREEMEPENLEQWAKRKRTKRQRFDHGHQNQETNKNLPSE 60

Query: 61  DEYFAFCLLLLARGRIPDSDTNNK-PS-SSPSSFPCYACSVCNKSFSSYQALGGHKASHR 120
           +EY A CLL+LARG    S      PS +SPS    Y C+VC KSFSSYQALGGHK SHR
Sbjct: 61  EEYLALCLLMLARGSAVQSPPLPPLPSRASPSDHRDYKCTVCGKSFSSYQALGGHKTSHR 120

Query: 121 K----------------SDGGDGGEKVSAAITAT--VSNSCRTHQCSICFKCFPTGQALG 177
           K                S    G   ++  +     VS S + H CSICFK F +GQALG
Sbjct: 121 KPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICFKSFASGQALG 180

BLAST of CmoCh19G005700 vs. Swiss-Prot
Match: ZFP1_WHEAT (Zinc finger protein 1 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26
Identity = 88/229 (38.43%), Postives = 118/229 (51.53%), Query Frame = 1

Query: 30  RSKRSKRLRFDSDDEYFAFCLLLLARG---RIPDSDTNNKPSSSPSSFPCYACSVCNKSF 89
           + KRS+R R  S++E  A CLL+L+RG   R+      +  +  P+ F C   SVC KSF
Sbjct: 45  KRKRSRRQR--SEEENLALCLLMLSRGGKQRVQAPQPESFAAPVPAEFKC---SVCGKSF 104

Query: 90  SSYQALGGHKASHRKSDGGDGGEKVSA-----------------AITATVSNS----CRT 149
           SSYQALGGHK SHR        +  +A                 A ++T ++S     R 
Sbjct: 105 SSYQALGGHKTSHRVKQPSPPSDAAAAPLVALPAVAAILPSAEPATSSTAASSDGATNRV 164

Query: 150 HQCSICFKCFPTGQALGGHKRRHYDGGSGNNSNSSSFT---------------QTHVREF 209
           H+CSIC K FPTGQALGGHKR+HYDGG G  ++S+                   +  R F
Sbjct: 165 HRCSICQKEFPTGQALGGHKRKHYDGGVGAAASSTELLAAAAAESEVGSTGNGSSAARAF 224

Query: 210 DLNVPAVPE-VWSRFPAGDRRQKSQSQSEKQYFAEEEVASPHPLKKPRI 219
           DLN+PAVPE VW          +  ++ +  +  +EEV SP   KKPR+
Sbjct: 225 DLNIPAVPEFVW----------RPCAKGKMMWEDDEEVQSPLAFKKPRL 258

BLAST of CmoCh19G005700 vs. TrEMBL
Match: A0A0A0K2F6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071440 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.4e-67
Identity = 153/256 (59.77%), Postives = 178/256 (69.53%), Query Frame = 1

Query: 1   MALEALNSPTSALA-HDQLLNHKPFDPSTHRSK-RSKRLRFDSDDEYFAFCLLLLARGRI 60
           MAL+ALNSP+S     D  L+H   D     SK RSKR RFDSDDEY AFCLL+LARGRI
Sbjct: 1   MALQALNSPSSTFPLADPSLDHHHHDSWIKPSKPRSKRPRFDSDDEYLAFCLLMLARGRI 60

Query: 61  PDSD-------TNNKPSSSPSSFP-------CYACSVCNKSFSSYQALGGHKASHRKSDG 120
             SD       TN+  S S SS P        Y C+VCNKSFSSYQALGGHKASHRKSD 
Sbjct: 61  SHSDHHHHHATTNDSYSPSNSSPPPPPLLKLTYNCNVCNKSFSSYQALGGHKASHRKSDA 120

Query: 121 GDGGEKVSAAITATVSNS-----CRTHQCSICFKCFPTGQALGGHKRRHYDGGSGNNS-- 180
           GD    VS  +++T+SNS      +THQCSICFKCFPTGQALGGHKRRHYDGGSGNN+  
Sbjct: 121 GD--NNVSPVVSSTLSNSTLGGGVKTHQCSICFKCFPTGQALGGHKRRHYDGGSGNNNTN 180

Query: 181 ----------NSSSFTQTHVREFDLNVPAVPEVWSRFPAGDRRQKSQSQSEKQYFAEEEV 224
                     N S+ TQTH R FDLN+PA+PE+W  F AG+RR+KSQSQS+ +Y  ++EV
Sbjct: 181 STAATAGSDGNGSTLTQTHHRNFDLNIPALPELWPGFTAGNRRKKSQSQSQ-EYSTDQEV 240

BLAST of CmoCh19G005700 vs. TrEMBL
Match: A0A0D2R0S4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G025200 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-41
Identity = 115/251 (45.82%), Postives = 149/251 (59.36%), Query Frame = 1

Query: 1   MALEALNSPTSALAHDQL--LNHKPFDPSTHRSKRSKRLRFD---SDDEYFAFCLLLLAR 60
           MALEA+NSPTSA A  +    N    +  T R KRSKR R D   +++EY A CL++LAR
Sbjct: 1   MALEAINSPTSATAPFRFDDTNLHCLESFTKR-KRSKRPRLDHVTAEEEYLALCLIMLAR 60

Query: 61  G---RIPDSDTNNKPSSSPSSFPCYACSVCNKSFSSYQALGGHKASHRKSDGGDGGEKVS 120
           G   R P   T  +P+S+    P Y CSVCNK+F+SYQALGGHKASHRK  GG+  +  S
Sbjct: 61  GGGQRSPSPTTMPEPTSTEEQKPSYKCSVCNKAFNSYQALGGHKASHRKLSGGNDDQTTS 120

Query: 121 AAITA---TVSNSCRTHQCSICFKCFPTGQALGGHKRRHYDGGSGNNS------------ 180
           A  TA     S+  ++H+CSIC K FPTGQALGGHKRRHY+GG+GNN+            
Sbjct: 121 ATGTAGGVVTSSGGKSHECSICHKSFPTGQALGGHKRRHYEGGAGNNNAGATGTASSVTE 180

Query: 181 -----NSSSFTQTHV--REFDLNVPAVPEVWSRFPAGDRRQKSQSQSEKQYFAEEEVASP 222
                ++++ T TH+  R+FDLN+PA+ E             S +        ++EV SP
Sbjct: 181 SEGVGSTNTNTNTHISNRDFDLNMPALLEF------------SPANFFVSATGDDEVQSP 238

BLAST of CmoCh19G005700 vs. TrEMBL
Match: A0A0D2QCD5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G132600 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 6.6e-41
Identity = 114/232 (49.14%), Postives = 138/232 (59.48%), Query Frame = 1

Query: 1   MALEALNSPTSALA--HDQLLNHKPFDPSTHRSKRSKRLRFDSD-----DEYFAFCLLLL 60
           MALEALNSPT+A A  H Q  N    D  T R KRSKR RFD D     +EY A CL++L
Sbjct: 1   MALEALNSPTNAAAPFHFQDTNLHCLDSFTKR-KRSKRPRFDDDHVPTEEEYLALCLVML 60

Query: 61  ARGRIPDSDTNNKPSSSPSSFPCYACSVCNKSFSSYQALGGHKASHRKSDGGDGGEKVSA 120
           ARG  P + +    + +      Y CSVCNK+F+SYQALGGHKASHRK  GG+       
Sbjct: 61  ARGGAPRTTST---TLTHQKLGTYKCSVCNKAFNSYQALGGHKASHRKLSGGNDDHSTPT 120

Query: 121 AITATVSN-SCRTHQCSICFKCFPTGQALGGHKRRHYDGGSGNNSN------SSSFTQTH 180
             +A  SN S R+H+CSIC K FPTGQALGGHKRRHY+GG+ N  +      SS+ T T 
Sbjct: 121 TSSAVGSNPSGRSHECSICHKSFPTGQALGGHKRRHYEGGAANTGSITSEGVSSTSTNTT 180

Query: 181 VREFDLNVPAVP--EVWSRFPAGDRRQKSQSQSEKQYFAEEEVASPHPLKKP 217
            R+FDLN+PA+P     + F +G                +EEV SPHP KKP
Sbjct: 181 HRDFDLNIPALPAFSPANLFVSG---------------GDEEVESPHPSKKP 213

BLAST of CmoCh19G005700 vs. TrEMBL
Match: Q5TJD4_CATRO (Zinc finger DNA-binding protein OS=Catharanthus roseus GN=zct3 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.5e-40
Identity = 113/268 (42.16%), Postives = 145/268 (54.10%), Query Frame = 1

Query: 1   MALEALNSPTS---ALAHDQLLNHKPFDPSTHRSKRSKRLRF-------------DSDDE 60
           MALEALNSPT+      ++     +  D    + KRSKR R               +++E
Sbjct: 1   MALEALNSPTTPTPVFQYENAATLRYLDQPWAKGKRSKRPRSVEPPPPQHQQQQQPTEEE 60

Query: 61  YFAFCLLLLARGRIPDSDT---------NNKPSSSPSSFP--CYACSVCNKSFSSYQALG 120
           Y A CL++LARG  P + T         +N PSSS S  P   Y CSVC+K+FSSYQALG
Sbjct: 61  YLALCLIMLARGGAPSTTTLPLPPPPQQHNIPSSSSSDPPKLLYKCSVCDKAFSSYQALG 120

Query: 121 GHKASHRK-----SDGGDGGEKVSAAITATVSNSCRTHQCSICFKCFPTGQALGGHKRRH 180
           GHKASHRK     + GGD     S + T   + + RTH+CSIC KCFP+GQALGGHKR H
Sbjct: 121 GHKASHRKLSTASAGGGDDQSTTSTSTTTAAAATGRTHECSICHKCFPSGQALGGHKRCH 180

Query: 181 YDGGSG------------NNSNSSSFTQTHV-REFDLNVPAVPEVWSRFPAGDRRQKSQS 224
           Y+GG+G             +S     T TH  R+FDLN+PA+PE W    AGD       
Sbjct: 181 YEGGAGAVGSTGNAASGVTSSEGMGSTNTHSNRDFDLNLPALPEFWLAAAAGD------- 240

BLAST of CmoCh19G005700 vs. TrEMBL
Match: V7AWZ3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G070800g PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.5e-40
Identity = 114/248 (45.97%), Postives = 147/248 (59.27%), Query Frame = 1

Query: 1   MALEALNSPTSA---LAHDQLLNHKPFDPSTHRSKRSKRLRFD----------SDDEYFA 60
           MALEAL SPT+A    +  +  N    D    + KRSKR R D          +++EY A
Sbjct: 1   MALEALQSPTTANPSFSPFEEANLSYLDTPWAKRKRSKRARMDQQLQLQHPSCTEEEYLA 60

Query: 61  FCLLLLARG---RIPDSDTNNKPS-SSPSSFPC------YACSVCNKSFSSYQALGGHKA 120
            CL++LARG     P   T +KP+ S  +S P       Y CSVCNK+FSSYQALGGHKA
Sbjct: 61  LCLIMLARGGSHAAPAIPTTSKPALSDNNSAPLSAAKLTYKCSVCNKAFSSYQALGGHKA 120

Query: 121 SHRKSDGGDGGEKVSAAITATVSNSC--RTHQCSICFKCFPTGQALGGHKRRHYDGGSGN 180
           SHRK  G    +  S+++T T +++   RTH+CSIC K FPTGQALGGHKR HY+GG GN
Sbjct: 121 SHRKLAGAAEDQPASSSVTTTSASNGGGRTHECSICHKTFPTGQALGGHKRCHYEGGGGN 180

Query: 181 NSNSSS--FTQTHV---REFDLNVPAVPEVWSRFPAGDRRQKSQSQSEKQYFAEEEVASP 219
           ++ ++S     TH    R+FDLN+PA P+  +RF                 FA+EEV+SP
Sbjct: 181 SAVTASEGVGSTHTGSHRDFDLNLPAFPDFPTRF-----------------FADEEVSSP 231

BLAST of CmoCh19G005700 vs. TAIR10
Match: AT1G27730.1 (AT1G27730.1 salt tolerance zinc finger)

HSP 1 Score: 142.1 bits (357), Expect = 4.1e-34
Identity = 104/248 (41.94%), Postives = 130/248 (52.42%), Query Frame = 1

Query: 1   MALEALNSPTSALAHDQLLNHKP-FDPSTH--RSKRSKRLRFD------SDDEYFAFCLL 60
           MALEAL SP  A     L      F    H  + KRSKR R D      +++EY AFCL+
Sbjct: 1   MALEALTSPRLASPIPPLFEDSSVFHGVEHWTKGKRSKRSRSDFHHQNLTEEEYLAFCLM 60

Query: 61  LLARGRIPDSDTNNKPSSSPSSFPCYACSVCNKSFSSYQALGGHKASHRK------SDGG 120
           LLAR      D    P         Y CSVC+K+FSSYQALGGHKASHRK      S GG
Sbjct: 61  LLAR------DNRQPPPPPAVEKLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGG 120

Query: 121 DGGEKVSAAITATVSN-SCRTHQCSICFKCFPTGQALGGHKRRHYDGGSGNNSNSSSFTQ 180
           D     SA  T+ V+  S ++H C+IC K FP+GQALGGHKR HY+G +  N++S S ++
Sbjct: 121 DDHSTSSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHKRCHYEGNNNINTSSVSNSE 180

Query: 181 -----THV----REFDLNVPAVPEVWSRFPAGDRRQKSQSQSEKQYFAEEEVASPHPLKK 224
                +HV    R FDLN+P +PE                        ++EV SP P KK
Sbjct: 181 GAGSTSHVSSSHRGFDLNIPPIPEF------------------SMVNGDDEVMSPMPAKK 224

BLAST of CmoCh19G005700 vs. TAIR10
Match: AT5G04340.1 (AT5G04340.1 zinc finger of Arabidopsis thaliana 6)

HSP 1 Score: 139.8 bits (351), Expect = 2.0e-33
Identity = 104/253 (41.11%), Postives = 123/253 (48.62%), Query Frame = 1

Query: 1   MALEALNSPTSALAHDQLLNHKPFDPSTHRSKRSKRLRFDSD------DEYFAFCLLLLA 60
           MALE L SP  +     L           + KRSKR R + D      DEY A CL+LLA
Sbjct: 1   MALETLTSPRLSSPMPTLFQDSALGFHGSKGKRSKRSRSEFDRQSLTEDEYIALCLMLLA 60

Query: 61  RGRIPDSDTNNKPSSS------PSSFPCYACSVCNKSFSSYQALGGHKASHRK------S 120
           R    + D +   SSS      P   P Y CSVC+K+FSSYQALGGHKASHRK      S
Sbjct: 61  RDGDRNRDLDLPSSSSSPPLLPPLPTPIYKCSVCDKAFSSYQALGGHKASHRKSFSLTQS 120

Query: 121 DGGDGGEKVSAAITATVS----NSCRTHQCSICFKCFPTGQALGGHKRRHYDGGSGNNSN 180
            GGD     SA  T+ +S     S ++H CSIC K F TGQALGGHKR HY+G +G   +
Sbjct: 121 AGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQALGGHKRCHYEGKNGGGVS 180

Query: 181 SS----------SFTQTHVREFDLNVPAVPEVWSRFPAGDRRQKSQSQSEKQYFAEEEVA 222
           SS          S   +  R FDLN+P +PE                        +EEV 
Sbjct: 181 SSVSNSEDVGSTSHVSSGHRGFDLNIPPIPEF------------------SMVNGDEEVM 235

BLAST of CmoCh19G005700 vs. TAIR10
Match: AT3G49930.1 (AT3G49930.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 134.8 bits (338), Expect = 6.5e-32
Identity = 93/202 (46.04%), Postives = 113/202 (55.94%), Query Frame = 1

Query: 1   MALEALNSPTSALAHDQ-------LLNHKPFD-PSTHRSKRSKRLRFD------SDDEYF 60
           MAL+ LNSPTS             L   +P +  S  + KR+KR R D      S++EY 
Sbjct: 1   MALDTLNSPTSTTTTTAPPPFLRCLDETEPENLESWTKRKRTKRHRIDQPNPPPSEEEYL 60

Query: 61  AFCLLLLARGRIPDSDTNNKPSSSPSSFPC------YACSVCNKSFSSYQALGGHKASHR 120
           A CLL+LARG    SD ++ PS   S  P       Y CSVC KSF SYQALGGHK SHR
Sbjct: 61  ALCLLMLARG---SSDHHSPPSDHHSLSPLSDHQKDYKCSVCGKSFPSYQALGGHKTSHR 120

Query: 121 KSDGGD-GGEKVSAAITATVSN-----SCRTHQCSICFKCFPTGQALGGHKRRHYDGGSG 177
           K    D      +      +SN     S +TH CSICFK FP+GQALGGHKR HYDGG+G
Sbjct: 121 KPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHNCSICFKSFPSGQALGGHKRCHYDGGNG 180

BLAST of CmoCh19G005700 vs. TAIR10
Match: AT5G43170.1 (AT5G43170.1 zinc-finger protein 3)

HSP 1 Score: 132.5 bits (332), Expect = 3.2e-31
Identity = 95/228 (41.67%), Postives = 121/228 (53.07%), Query Frame = 1

Query: 1   MALEALNSPTSALAHDQLLNHKPFDPSTHRSKRSKRLRFD-------SDDEYFAFCLLLL 60
           MALEALNSP   L  D L      +  T   KRSKR R D       +++EY AFCL+LL
Sbjct: 1   MALEALNSPR--LVEDPL-RFNGVEQWTKCKKRSKRSRSDLHHNHRLTEEEYLAFCLMLL 60

Query: 61  ARGRIPDSDTNNKPSSSPSSFPCYACSVCNKSFSSYQALGGHKASHRKSDGGDGGEKVSA 120
           AR      D  +  S + +  P Y C VC K+FSSYQALGGHKASHR   GG   +K   
Sbjct: 61  AR------DGGDLDSVTVAEKPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDK--- 120

Query: 121 AITATVSNSCRTHQCSICFKCFPTGQALGGHKRRHYDGGSGNN---SNSSSFTQTHVREF 180
              +T S + ++H CS+C K F TGQALGGHKR HYDGG  N+    ++S  + +  R F
Sbjct: 121 ---STPSTAVKSHVCSVCGKSFATGQALGGHKRCHYDGGVSNSEGVGSTSHVSSSSHRGF 180

Query: 181 DLNVPAVPEVWSRFPAGDRRQKSQSQSEKQYFAEEEVASPHPLKKPRI 219
           DLN+  V                     + +  ++EV SP   KKPR+
Sbjct: 181 DLNIIPV---------------------QGFSPDDEVMSPMATKKPRL 192

BLAST of CmoCh19G005700 vs. TAIR10
Match: AT5G67450.1 (AT5G67450.1 zinc-finger protein 1)

HSP 1 Score: 129.8 bits (325), Expect = 2.1e-30
Identity = 95/237 (40.08%), Postives = 114/237 (48.10%), Query Frame = 1

Query: 1   MALEALNSPTSALAHDQLLNHKP-FDPST----HRSKRSKRLRFD-------------SD 60
           MALE LNSPT+      LL ++   +P       + KR+KR RFD             S+
Sbjct: 1   MALETLNSPTATTTARPLLRYREEMEPENLEQWAKRKRTKRQRFDHGHQNQETNKNLPSE 60

Query: 61  DEYFAFCLLLLARGRIPDSDTNNK-PS-SSPSSFPCYACSVCNKSFSSYQALGGHKASHR 120
           +EY A CLL+LARG    S      PS +SPS    Y C+VC KSFSSYQALGGHK SHR
Sbjct: 61  EEYLALCLLMLARGSAVQSPPLPPLPSRASPSDHRDYKCTVCGKSFSSYQALGGHKTSHR 120

Query: 121 K----------------SDGGDGGEKVSAAITAT--VSNSCRTHQCSICFKCFPTGQALG 177
           K                S    G   ++  +     VS S + H CSICFK F +GQALG
Sbjct: 121 KPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICFKSFASGQALG 180

BLAST of CmoCh19G005700 vs. NCBI nr
Match: gi|449438625|ref|XP_004137088.1| (PREDICTED: zinc finger protein ZAT10 [Cucumis sativus])

HSP 1 Score: 263.5 bits (672), Expect = 3.4e-67
Identity = 153/256 (59.77%), Postives = 178/256 (69.53%), Query Frame = 1

Query: 1   MALEALNSPTSALA-HDQLLNHKPFDPSTHRSK-RSKRLRFDSDDEYFAFCLLLLARGRI 60
           MAL+ALNSP+S     D  L+H   D     SK RSKR RFDSDDEY AFCLL+LARGRI
Sbjct: 1   MALQALNSPSSTFPLADPSLDHHHHDSWIKPSKPRSKRPRFDSDDEYLAFCLLMLARGRI 60

Query: 61  PDSD-------TNNKPSSSPSSFP-------CYACSVCNKSFSSYQALGGHKASHRKSDG 120
             SD       TN+  S S SS P        Y C+VCNKSFSSYQALGGHKASHRKSD 
Sbjct: 61  SHSDHHHHHATTNDSYSPSNSSPPPPPLLKLTYNCNVCNKSFSSYQALGGHKASHRKSDA 120

Query: 121 GDGGEKVSAAITATVSNS-----CRTHQCSICFKCFPTGQALGGHKRRHYDGGSGNNS-- 180
           GD    VS  +++T+SNS      +THQCSICFKCFPTGQALGGHKRRHYDGGSGNN+  
Sbjct: 121 GD--NNVSPVVSSTLSNSTLGGGVKTHQCSICFKCFPTGQALGGHKRRHYDGGSGNNNTN 180

Query: 181 ----------NSSSFTQTHVREFDLNVPAVPEVWSRFPAGDRRQKSQSQSEKQYFAEEEV 224
                     N S+ TQTH R FDLN+PA+PE+W  F AG+RR+KSQSQS+ +Y  ++EV
Sbjct: 181 STAATAGSDGNGSTLTQTHHRNFDLNIPALPELWPGFTAGNRRKKSQSQSQ-EYSTDQEV 240

BLAST of CmoCh19G005700 vs. NCBI nr
Match: gi|659134206|ref|XP_008467082.1| (PREDICTED: zinc finger protein ZAT10-like [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 4.2e-65
Identity = 154/268 (57.46%), Postives = 178/268 (66.42%), Query Frame = 1

Query: 1   MALEALNSPTS--------ALAHDQLLNHKPFDPSTHRSK-RSKRLRFDSDDEYFAFCLL 60
           MAL+ALNSP+S        AL H    +H   DP    SK RSKR RFDSDDEY AFCLL
Sbjct: 1   MALQALNSPSSTFPLTDPSALDHH---HHHHHDPWIKPSKPRSKRPRFDSDDEYLAFCLL 60

Query: 61  LLARGRIPDSD-----TNNKPSSSPSSFP--------CYACSVCNKSFSSYQALGGHKAS 120
           +LARGRI  SD     T +  S SPSS P         Y C+VCNKSFSSYQALGGHKAS
Sbjct: 61  MLARGRISRSDHHSTSTGDHSSYSPSSSPPPPPLLKLAYNCNVCNKSFSSYQALGGHKAS 120

Query: 121 HRKSDGGDGGEKVSAAITATVSNS------CRTHQCSICFKCFPTGQALGGHKRRHYDGG 180
           HRKSD G+    V   ++ T+SNS       RTHQCSICFKCFPTGQALGGHKRRHYDGG
Sbjct: 121 HRKSDAGE-NNNVPPVVSTTLSNSTVGSGGSRTHQCSICFKCFPTGQALGGHKRRHYDGG 180

Query: 181 SGNNSNS--------------SSFTQTHVREFDLNVPAVPEVWSRFPAGDRRQKSQSQSE 224
           SGNN+NS              S+ TQTH R FDLN+PA+P++W  F AG+R++KSQSQS+
Sbjct: 181 SGNNTNSSPAAAAAAGSDGNGSTLTQTHHRNFDLNIPALPDLWPGFTAGNRQKKSQSQSQ 240

BLAST of CmoCh19G005700 vs. NCBI nr
Match: gi|823239571|ref|XP_012452438.1| (PREDICTED: zinc finger protein ZAT10-like [Gossypium raimondii])

HSP 1 Score: 177.6 bits (449), Expect = 2.5e-41
Identity = 115/251 (45.82%), Postives = 149/251 (59.36%), Query Frame = 1

Query: 1   MALEALNSPTSALAHDQL--LNHKPFDPSTHRSKRSKRLRFD---SDDEYFAFCLLLLAR 60
           MALEA+NSPTSA A  +    N    +  T R KRSKR R D   +++EY A CL++LAR
Sbjct: 1   MALEAINSPTSATAPFRFDDTNLHCLESFTKR-KRSKRPRLDHVTAEEEYLALCLIMLAR 60

Query: 61  G---RIPDSDTNNKPSSSPSSFPCYACSVCNKSFSSYQALGGHKASHRKSDGGDGGEKVS 120
           G   R P   T  +P+S+    P Y CSVCNK+F+SYQALGGHKASHRK  GG+  +  S
Sbjct: 61  GGGQRSPSPTTMPEPTSTEEQKPSYKCSVCNKAFNSYQALGGHKASHRKLSGGNDDQTTS 120

Query: 121 AAITA---TVSNSCRTHQCSICFKCFPTGQALGGHKRRHYDGGSGNNS------------ 180
           A  TA     S+  ++H+CSIC K FPTGQALGGHKRRHY+GG+GNN+            
Sbjct: 121 ATGTAGGVVTSSGGKSHECSICHKSFPTGQALGGHKRRHYEGGAGNNNAGATGTASSVTE 180

Query: 181 -----NSSSFTQTHV--REFDLNVPAVPEVWSRFPAGDRRQKSQSQSEKQYFAEEEVASP 222
                ++++ T TH+  R+FDLN+PA+ E             S +        ++EV SP
Sbjct: 181 SEGVGSTNTNTNTHISNRDFDLNMPALLEF------------SPANFFVSATGDDEVQSP 238

BLAST of CmoCh19G005700 vs. NCBI nr
Match: gi|823133467|ref|XP_012466587.1| (PREDICTED: zinc finger protein ZAT10-like [Gossypium raimondii])

HSP 1 Score: 175.6 bits (444), Expect = 9.4e-41
Identity = 114/232 (49.14%), Postives = 138/232 (59.48%), Query Frame = 1

Query: 1   MALEALNSPTSALA--HDQLLNHKPFDPSTHRSKRSKRLRFDSD-----DEYFAFCLLLL 60
           MALEALNSPT+A A  H Q  N    D  T R KRSKR RFD D     +EY A CL++L
Sbjct: 1   MALEALNSPTNAAAPFHFQDTNLHCLDSFTKR-KRSKRPRFDDDHVPTEEEYLALCLVML 60

Query: 61  ARGRIPDSDTNNKPSSSPSSFPCYACSVCNKSFSSYQALGGHKASHRKSDGGDGGEKVSA 120
           ARG  P + +    + +      Y CSVCNK+F+SYQALGGHKASHRK  GG+       
Sbjct: 61  ARGGAPRTTST---TLTHQKLGTYKCSVCNKAFNSYQALGGHKASHRKLSGGNDDHSTPT 120

Query: 121 AITATVSN-SCRTHQCSICFKCFPTGQALGGHKRRHYDGGSGNNSN------SSSFTQTH 180
             +A  SN S R+H+CSIC K FPTGQALGGHKRRHY+GG+ N  +      SS+ T T 
Sbjct: 121 TSSAVGSNPSGRSHECSICHKSFPTGQALGGHKRRHYEGGAANTGSITSEGVSSTSTNTT 180

Query: 181 VREFDLNVPAVP--EVWSRFPAGDRRQKSQSQSEKQYFAEEEVASPHPLKKP 217
            R+FDLN+PA+P     + F +G                +EEV SPHP KKP
Sbjct: 181 HRDFDLNIPALPAFSPANLFVSG---------------GDEEVESPHPSKKP 213

BLAST of CmoCh19G005700 vs. NCBI nr
Match: gi|55734108|emb|CAF74935.1| (zinc finger DNA-binding protein [Catharanthus roseus])

HSP 1 Score: 174.5 bits (441), Expect = 2.1e-40
Identity = 113/268 (42.16%), Postives = 145/268 (54.10%), Query Frame = 1

Query: 1   MALEALNSPTS---ALAHDQLLNHKPFDPSTHRSKRSKRLRF-------------DSDDE 60
           MALEALNSPT+      ++     +  D    + KRSKR R               +++E
Sbjct: 1   MALEALNSPTTPTPVFQYENAATLRYLDQPWAKGKRSKRPRSVEPPPPQHQQQQQPTEEE 60

Query: 61  YFAFCLLLLARGRIPDSDT---------NNKPSSSPSSFP--CYACSVCNKSFSSYQALG 120
           Y A CL++LARG  P + T         +N PSSS S  P   Y CSVC+K+FSSYQALG
Sbjct: 61  YLALCLIMLARGGAPSTTTLPLPPPPQQHNIPSSSSSDPPKLLYKCSVCDKAFSSYQALG 120

Query: 121 GHKASHRK-----SDGGDGGEKVSAAITATVSNSCRTHQCSICFKCFPTGQALGGHKRRH 180
           GHKASHRK     + GGD     S + T   + + RTH+CSIC KCFP+GQALGGHKR H
Sbjct: 121 GHKASHRKLSTASAGGGDDQSTTSTSTTTAAAATGRTHECSICHKCFPSGQALGGHKRCH 180

Query: 181 YDGGSG------------NNSNSSSFTQTHV-REFDLNVPAVPEVWSRFPAGDRRQKSQS 224
           Y+GG+G             +S     T TH  R+FDLN+PA+PE W    AGD       
Sbjct: 181 YEGGAGAVGSTGNAASGVTSSEGMGSTNTHSNRDFDLNLPALPEFWLAAAAGD------- 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ZAT10_ARATH7.2e-3341.94Zinc finger protein ZAT10 OS=Arabidopsis thaliana GN=ZAT10 PE=2 SV=1[more]
ZAT6_ARATH3.6e-3241.11Zinc finger protein ZAT6 OS=Arabidopsis thaliana GN=ZAT6 PE=2 SV=1[more]
AZF3_ARATH5.7e-3041.67Zinc finger protein AZF3 OS=Arabidopsis thaliana GN=AZF3 PE=1 SV=1[more]
AZF1_ARATH3.7e-2940.08Zinc finger protein AZF1 OS=Arabidopsis thaliana GN=AZF1 PE=2 SV=1[more]
ZFP1_WHEAT1.7e-2638.43Zinc finger protein 1 OS=Triticum aestivum PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0K2F6_CUCSA2.4e-6759.77Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071440 PE=4 SV=1[more]
A0A0D2R0S4_GOSRA1.7e-4145.82Uncharacterized protein OS=Gossypium raimondii GN=B456_010G025200 PE=4 SV=1[more]
A0A0D2QCD5_GOSRA6.6e-4149.14Uncharacterized protein OS=Gossypium raimondii GN=B456_002G132600 PE=4 SV=1[more]
Q5TJD4_CATRO1.5e-4042.16Zinc finger DNA-binding protein OS=Catharanthus roseus GN=zct3 PE=2 SV=1[more]
V7AWZ3_PHAVU2.5e-4045.97Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G070800g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G27730.14.1e-3441.94 salt tolerance zinc finger[more]
AT5G04340.12.0e-3341.11 zinc finger of Arabidopsis thaliana 6[more]
AT3G49930.16.5e-3246.04 C2H2 and C2HC zinc fingers superfamily protein[more]
AT5G43170.13.2e-3141.67 zinc-finger protein 3[more]
AT5G67450.12.1e-3040.08 zinc-finger protein 1[more]
Match NameE-valueIdentityDescription
gi|449438625|ref|XP_004137088.1|3.4e-6759.77PREDICTED: zinc finger protein ZAT10 [Cucumis sativus][more]
gi|659134206|ref|XP_008467082.1|4.2e-6557.46PREDICTED: zinc finger protein ZAT10-like [Cucumis melo][more]
gi|823239571|ref|XP_012452438.1|2.5e-4145.82PREDICTED: zinc finger protein ZAT10-like [Gossypium raimondii][more]
gi|823133467|ref|XP_012466587.1|9.4e-4149.14PREDICTED: zinc finger protein ZAT10-like [Gossypium raimondii][more]
gi|55734108|emb|CAF74935.1|2.1e-4042.16zinc finger DNA-binding protein [Catharanthus roseus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
IPR015880Zinc finger, C2H2-like
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G005700.1CmoCh19G005700.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PFAMPF13912zf-C2H2_6coord: 125..150
score: 3.0E-9coord: 77..101
score: 1.1
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 128..148
score: -coord: 79..99
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 126..148
score: 8.704coord: 77..104
score: 10
IPR015880Zinc finger, C2H2-likeSMARTSM00355c2h2final6coord: 126..148
score: 0.5coord: 77..99
score: 0
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 1..180
score: 7.6E-70coord: 197..218
score: 7.6
NoneNo IPR availablePANTHERPTHR26374:SF208ZINC FINGER PROTEIN AZF3-RELATEDcoord: 197..218
score: 7.6E-70coord: 1..180
score: 7.6
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 77..148
score: 6.4

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh19G005700CmoCh11G014150Cucurbita moschata (Rifu)cmocmoB110
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G005700Cucurbita maxima (Rimu)cmacmoB718
CmoCh19G005700Melon (DHL92) v3.5.1cmomeB454
CmoCh19G005700Melon (DHL92) v3.6.1cmomedB523
CmoCh19G005700Silver-seed gourdcarcmoB0512
CmoCh19G005700Wax gourdcmowgoB0642
CmoCh19G005700Wax gourdcmowgoB0659
CmoCh19G005700Cucurbita moschata (Rifu)cmocmoB395