Carg23033 (gene) Silver-seed gourd

Overview
NameCarg23033
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger protein
LocationCucurbita_argyrosperma_scaffold_163 : 60934 .. 61569 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTTGCAAGCTCTCAATTCCTCGACCGAGCCATGGGTCAAGCCATCCAAGCGCTCAACCCACCATCCGCTCGACTCCGACGACGAGCACTTAGCCTTTTCCCTTCTCATGCTCGCACACGGCGGAAACATCCCATCTCCATCTCCCACAAAATTGCCTTATTCTTGTTCCGTTTGTAATAAGTCCTTCTCTTCTTACCAAGCCCTCGGCGGCCATAAGTCCAGCCACCGGAAATCAGACGCCGCCGCCGACACAGATTCCACCACCCTCACCACCACCGCCACTTCCGCCGTCTCTTCTTCTACAAGGACCCACCAGTGTTCCATCTGTTTCAAGTGTTTCCCCACTGGCCAGGCTCTCGGTGGCCACAAACGACGCCACTACGACGGCAACAACAATAAAACCCTCGCTGCTGGTTCCGATAGTAACGGCGACTCCACTCTCACGCACACCCATGTCCGGGACTTCGATCTCAACGTGCCGGCCTTGCCGGAGTTCTCGCCGAGATTCCCGGACAGTCACCGGCGAGAAAAAAGTCAAAGTCAAAGTCAAATCCGGGAGAAGTATGTGGAGGAGGAAGTGCAGAGTCCTCACCCGTTGAAGAAGCCGAGGCTTTTGCTTCCGGTGGAATGA

mRNA sequence

ATGGCCTTGCAAGCTCTCAATTCCTCGACCGAGCCATGGGTCAAGCCATCCAAGCGCTCAACCCACCATCCGCTCGACTCCGACGACGAGCACTTAGCCTTTTCCCTTCTCATGCTCGCACACGGCGGAAACATCCCATCTCCATCTCCCACAAAATTGCCTTATTCTTGTTCCGTTTGTAATAAGTCCTTCTCTTCTTACCAAGCCCTCGGCGGCCATAAGTCCAGCCACCGGAAATCAGACGCCGCCGCCGACACAGATTCCACCACCCTCACCACCACCGCCACTTCCGCCGTCTCTTCTTCTACAAGGACCCACCAGTGTTCCATCTGTTTCAAGTGTTTCCCCACTGGCCAGGCTCTCGGTGGCCACAAACGACGCCACTACGACGGCAACAACAATAAAACCCTCGCTGCTGGTTCCGATAGTAACGGCGACTCCACTCTCACGCACACCCATGTCCGGGACTTCGATCTCAACGTGCCGGCCTTGCCGGAGTTCTCGCCGAGATTCCCGGACAGTCACCGGCGAGAAAAAAGTCAAAGTCAAAGTCAAATCCGGGAGAAGTATGTGGAGGAGGAAGTGCAGAGTCCTCACCCGTTGAAGAAGCCGAGGCTTTTGCTTCCGGTGGAATGA

Coding sequence (CDS)

ATGGCCTTGCAAGCTCTCAATTCCTCGACCGAGCCATGGGTCAAGCCATCCAAGCGCTCAACCCACCATCCGCTCGACTCCGACGACGAGCACTTAGCCTTTTCCCTTCTCATGCTCGCACACGGCGGAAACATCCCATCTCCATCTCCCACAAAATTGCCTTATTCTTGTTCCGTTTGTAATAAGTCCTTCTCTTCTTACCAAGCCCTCGGCGGCCATAAGTCCAGCCACCGGAAATCAGACGCCGCCGCCGACACAGATTCCACCACCCTCACCACCACCGCCACTTCCGCCGTCTCTTCTTCTACAAGGACCCACCAGTGTTCCATCTGTTTCAAGTGTTTCCCCACTGGCCAGGCTCTCGGTGGCCACAAACGACGCCACTACGACGGCAACAACAATAAAACCCTCGCTGCTGGTTCCGATAGTAACGGCGACTCCACTCTCACGCACACCCATGTCCGGGACTTCGATCTCAACGTGCCGGCCTTGCCGGAGTTCTCGCCGAGATTCCCGGACAGTCACCGGCGAGAAAAAAGTCAAAGTCAAAGTCAAATCCGGGAGAAGTATGTGGAGGAGGAAGTGCAGAGTCCTCACCCGTTGAAGAAGCCGAGGCTTTTGCTTCCGGTGGAATGA

Protein sequence

MALQALNSSTEPWVKPSKRSTHHPLDSDDEHLAFSLLMLAHGGNIPSPSPTKLPYSCSVCNKSFSSYQALGGHKSSHRKSDAAADTDSTTLTTTATSAVSSSTRTHQCSICFKCFPTGQALGGHKRRHYDGNNNKTLAAGSDSNGDSTLTHTHVRDFDLNVPALPEFSPRFPDSHRREKSQSQSQIREKYVEEEVQSPHPLKKPRLLLPVE
Homology
[Close]
BLAST of Carg23033 vs. NCBI nr
Match: XP_022988946.1 (zinc finger protein ZAT10-like [Cucurbita maxima])

HSP 1 Score: 297.7 bits (761), Expect = 3.0e-77
Identity = 180/216 (83.33%), Postives = 183/216 (84.72%), Query Frame = 0 

Query: 1   MALQALNSSTEPWVKPSKRSTHHPLDSDDEHLAFSLLMLAHGGNIPSPSPTKLPYSCSVC 60
           MALQALNS TEPW+K SKRS+  PLDSDDEHLAFSLLMLAHGGNI  PSPTKLPYSCSVC
Sbjct: 1   MALQALNSPTEPWIKRSKRSSRPPLDSDDEHLAFSLLMLAHGGNI--PSPTKLPYSCSVC 60

Query: 61  NKSFSSYQALGGHKSS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQCSICFKCFPTGQ 120
           NKSFSSYQALGGHKSS        XXXXXXXXXXXXXXXXXXXXXTHQCSICFKCFPTGQ
Sbjct: 61  NKSFSSYQALGGHKSSHRKSDAIDXXXXXXXXXXXXXXXXXXXXXTHQCSICFKCFPTGQ 120

Query: 121 ALGGHKRRHYDGNNNKTLAAGSDSNGDSTLTHTHVRDFDLNVPALPEFSPRFPDSHRR-- 180
           ALGGHKRRHYDGNNNKTLAAGSDSNGDSTLT THVRDFDLNVPALPEF PRFPDSHRR  
Sbjct: 121 ALGGHKRRHYDGNNNKTLAAGSDSNGDSTLTQTHVRDFDLNVPALPEFWPRFPDSHRRXX 180

Query: 181 --EKSQSQSQIREKYVEEEVQSPHPLKKPRLLLPVE 212
                          VEEEVQSPHPLKKPRLL+PVE
Sbjct: 181 XXXXXXXXXXXXXXXVEEEVQSPHPLKKPRLLVPVE 214

[Close]
BLAST of Carg23033 vs. NCBI nr
Match: XP_022927730.1 (zinc finger protein ZAT10 [Cucurbita moschata])

HSP 1 Score: 221.5 bits (563), Expect = 2.8e-54
Identity = 130/211 (61.61%), Postives = 132/211 (62.56%), Query Frame = 0 

Query: 1   MALQALNSSTEPWVKPSKRSTHHPLDSDDEHLAFSLLMLAHGGNIPSPSPTKLPYSCSVC 60
           MALQALNS TEPWVKPSKRST+ PLDSDDEHLAFSLLMLAHGGNI  PSPTKLPYSCS+C
Sbjct: 1   MALQALNSPTEPWVKPSKRSTNPPLDSDDEHLAFSLLMLAHGGNI--PSPTKLPYSCSLC 60

Query: 61  NKSFSSYQALGGHKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQCSICFKCFPTGQA 120
           NKSFSSYQALGGHKSS                           X                
Sbjct: 61  NKSFSSYQALGGHKSS------HRKSDAAADTDSTTSAVSSSTXXXXXXXXXXXXXXXXX 120

Query: 121 LGGHKRRHYDGNNNKTLAAGSDSNGDSTLTHTHVRDFDLNVPALPEFSPRFPDSHRREKS 180
                                          THVRDFDLNVPALPEFSPRFPDSHRREKS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHVRDFDLNVPALPEFSPRFPDSHRREKS 180

Query: 181 QSQSQIREKYVEEEVQSPHPLKKPRLLLPVE 212
           QSQSQIREKYVEEEVQSPHP KKPRLLLPVE
Sbjct: 181 QSQSQIREKYVEEEVQSPHPSKKPRLLLPVE 203

[Close]
BLAST of Carg23033 vs. NCBI nr
Match: XP_023531765.1 (zinc finger protein ZAT10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.5 bits (506), Expect = 1.1e-47
Identity = 124/211 (58.77%), Postives = 125/211 (59.24%), Query Frame = 0 

Query: 1   MALQALNSSTEPWVKPSKRSTHHPLDSDDEHLAFSLLMLAHGGNIPSPSPTKLPYSCSVC 60
           MALQALNS TEPWVKPSKRSTH PLDSDD+HLAFSLLMLAHGGNI  PSPTKLPYSCSVC
Sbjct: 1   MALQALNSPTEPWVKPSKRSTHPPLDSDDQHLAFSLLMLAHGGNI--PSPTKLPYSCSVC 60

Query: 61  NKSFSSYQALGGHKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQCSICFKCFPTGQA 120
           NKSFSSYQALGGHKSS                       XXX                  
Sbjct: 61  NKSFSSYQALGGHKSS-----HRKSDAAADTDSTTTSAVXXXTRXXXXXXXXXXXXXXXX 120

Query: 121 LGGHKRRHYDGNNNKTLAAGSDSNGDSTLTHTHVRDFDLNVPALPEFSPRFPDSHRREKS 180
                     GNNNKTLAAGSDSNGDSTLTHTHVRDFDLNVPA PE              
Sbjct: 121 XXXXXXXXXXGNNNKTLAAGSDSNGDSTLTHTHVRDFDLNVPASPE-XXXXXXXXXXXXX 180

Query: 181 QSQSQIREKYVEEEVQSPHPLKKPRLLLPVE 212
                           SPHPLKKPRLLLPVE
Sbjct: 181 XXXXXXXXXXXXXXXXSPHPLKKPRLLLPVE 203

[Close]
BLAST of Carg23033 vs. NCBI nr
Match: XP_004137088.1 (PREDICTED: zinc finger protein ZAT10 [Cucumis sativus] >KGN43855.1 hypothetical protein Csa_7G071440 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 4.1e-42
Identity = 121/255 (47.45%), Postives = 135/255 (52.94%), Query Frame = 0 

Query: 1   MALQALN--SSTEP-------------WVKPSK-RSTHHPLDSDDEHLAFSLLMLAHG-- 60
           MALQALN  SST P             W+KPSK RS     DSDDE+LAF LLMLA G  
Sbjct: 1   MALQALNSPSSTFPLADPSLDHHHHDSWIKPSKPRSKRPRFDSDDEYLAFCLLMLARGRI 60

Query: 61  --------------------GNIPSPSPTKLPYSCSVCNKSFSSYQALGGHKSS-XXXXX 120
                                        KL Y+C+VCNKSFSSYQALGGHK+S      
Sbjct: 61  SHSXXXXXXXXXXXXXXXXXXXXXXXXXXKLTYNCNVCNKSFSSYQALGGHKASHRKSDA 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXTHQCSICFKCFPTGQALGGHKRRHYDG-----NNNKT 180
                                  THQCSICFKCFPTGQALGGHKRRHYDG          
Sbjct: 121 GDNNVSPVVSSTLSNSTLGGGVKTHQCSICFKCFPTGQALGGHKRRHYDGXXXXXXXXXX 180

Query: 181 LAAGSDSNGDSTLTHTHVRDFDLNVPALPEFSPRFPDSHRREKSQSQSQIREKYVEEEVQ 212
                       LT TH R+FDLN+PALPE  P F   +RR+KSQSQSQ  E   ++EV+
Sbjct: 181 XXXXXXXXXXXXLTQTHHRNFDLNIPALPELWPGFTAGNRRKKSQSQSQ--EYSTDQEVE 240

[Close]
BLAST of Carg23033 vs. NCBI nr
Match: XP_022972550.1 (zinc finger protein AZF3-like [Cucurbita maxima])

HSP 1 Score: 170.2 bits (430), Expect = 7.3e-39
Identity = 123/216 (56.94%), Postives = 143/216 (66.20%), Query Frame = 0 

Query: 1   MALQALNSST--------------EPWVKPSKRSTHHPLDSDDEHLAFSLLMLAHG---- 60
           MAL+ALNS T              +P    SKRS     DSDDE+ AF LL+LA G    
Sbjct: 1   MALEALNSPTSALVHDQLLNHKPFDPLTHRSKRSKRPRFDSDDEYFAFCLLLLARGRISX 60

Query: 61  ---GNIPSPSPTKLPYSCSVCNKSFSSYQALGGHKSSXXXXXXXXXXXXXXXXXXXXXXX 120
                  S SP++  Y+CS+CNK FSSYQALGGHK+SXXXXXXXXXXXXXXXXXX     
Sbjct: 61  XXXXXKSSLSPSQ-SYACSICNKLFSSYQALGGHKASXXXXXXXXXXXXXXXXXXITATM 120

Query: 121 XXXXXTHQCSICFKCFPTGQALGGHKRRHYDGNNNKTLAAGSDSNGDSTLTHTHVRDFDL 180
                THQCSICFKCFPTGQALGGHKRRHYDG       +G+ SN  S+ T TH+R+FDL
Sbjct: 121 SNSCRTHQCSICFKCFPTGQALGGHKRRHYDG------GSGNKSN-SSSFTQTHIREFDL 180

Query: 181 NVPALPEFSPRFPDSHRREKSQSQSQIREKYVEEEV 196
           NVPA+PE   RFP S R++KSQSQS  ++ + EEEV
Sbjct: 181 NVPAVPEVWSRFPASDRQQKSQSQS-AKQDFAEEEV 207

[Close]
BLAST of Carg23033 vs. TAIR10
Match: AT1G27730.1 (salt tolerance zinc finger)

HSP 1 Score: 108.6 bits (270), Expect = 4.7e-24
Identity = 87/167 (52.10%), Postives = 104/167 (62.28%), Query Frame = 0 

Query: 52  KLPYSCSVCNKSFSSYQALGGHKSS-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXTH 111
           KL Y CSVC+K+FSSYQALGGHK+S          XXXXXXXXXXXXXXXXXXX    +H
Sbjct: 77  KLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSXXXXXXXXXXXXXXXXXXXGSGKSH 136

Query: 112 QCSICFKCFPTGQALGGHKRRHYDGNNNKTLAAGSDSNGDSTLTH--THVRDFDLNVPAL 171
            C+IC K FP+GQALGGHKR HY+GNNN   ++ S+S G  + +H  +  R FDLN+P +
Sbjct: 137 VCTICNKSFPSGQALGGHKRCHYEGNNNINTSSVSNSEGAGSTSHVSSSHRGFDLNIPPI 196

Query: 172 PEFSPRFPDSHRREKSQSQSQIREKYVEEEVQSPHPLKKPRLLLPVE 212
           PEFS    D                   +EV SP P KKPR   PV+
Sbjct: 197 PEFSMVNGD-------------------DEVMSPMPAKKPRFDFPVK 224

[Close]
BLAST of Carg23033 vs. TAIR10
Match: AT5G04340.1 (zinc finger of Arabidopsis thaliana 6)

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 103/209 (49.28%), Postives = 124/209 (59.33%), Query Frame = 0 

Query: 27  SDDEHLAFSLLMLAHGG------NIPS--PSPTKLP------YSCSVCNKSFSSYQALGG 86
           ++DE++A  L++LA  G      ++PS   SP  LP      Y CSVC+K+FSSYQALGG
Sbjct: 47  TEDEYIALCLMLLARDGDRNRDLDLPSSXXSPPLLPPLPTPIYKCSVCDKAFSSYQALGG 106

Query: 87  HKSS--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQCSICFKCFPTGQALGGH 146
           HK+S         XXXXXXXXXXXXXXXXXXXXXXXXX  +H CSIC K F TGQALGGH
Sbjct: 107 HKASHRKSFSLTQXXXXXXXXXXXXXXXXXXXXXXXXXVKSHVCSICHKSFATGQALGGH 166

Query: 147 KRRHYDGNNNKTLAAGSDSNGDSTLTHTHV----RDFDLNVPALPEFSPRFPDSHRREKS 206
           KR HY+G N   +++ S SN +   + +HV    R FDLN+P +PEFS    D       
Sbjct: 167 KRCHYEGKNGGGVSS-SVSNSEDVGSTSHVSSGHRGFDLNIPPIPEFSMVNGD------- 226

Query: 207 QSQSQIREKYVEEEVQSPHPLKKPRLLLP 210
                       EEV SP P KK R   P
Sbjct: 227 ------------EEVMSPMPAKKLRFDFP 235

[Close]
BLAST of Carg23033 vs. TAIR10
Match: AT5G67450.1 (zinc-finger protein 1)

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-18
Identity = 67/188 (35.64%), Postives = 80/188 (42.55%), Query Frame = 0 

Query: 19  RSTHHPLDSDDEHLAFSLLMLAHGGNIPSP----------SPTKLPYSCSVCNKSFSSYQ 78
           + T+  L S++E+LA  LLMLA G  + SP                  C+VC KSFSSYQ
Sbjct: 51  QETNKNLPSEEEYLALCLLMLARGSAVQSPPLXXXXXXXXXXXXXXXKCTVCGKSFSSYQ 110

Query: 79  ALGGHKSS----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQCSICF 138
           ALGGHK+S                                             H CSICF
Sbjct: 111 ALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICF 170

Query: 139 KCFPTGQALGGHKRRHYDGNNNK----------TLAAGSDSN-------GDSTLTHTHVR 164
           K F +GQALGGHKR HYDG NN            L AGSD +        + +    H R
Sbjct: 171 KSFASGQALGGHKRCHYDGGNNXXXXXXXXXXVELVAGSDVSDVDNERWSEESAIGGH-R 230

[Close]
BLAST of Carg23033 vs. TAIR10
Match: AT3G49930.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 88.6 bits (218), Expect = 5.1e-18
Identity = 52/113 (46.02%), Postives = 58/113 (51.33%), Query Frame = 0 

Query: 55  YSCSVCNKSFSSYQALGGHKSS----XXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQCSI 114
           Y CSVC KSF SYQALGGHK+S                                TH CSI
Sbjct: 94  YKCSVCGKSFPSYQALGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHNCSI 153

Query: 115 CFKCFPTGQALGGHKRRHYDGNNNKTLAAGSDSNGDSTLTHTHVRDFDLNVPA 164
           CFK FP+GQALGGHKR HYDG N        +SNGD++        FDLN+PA
Sbjct: 154 CFKSFPSGQALGGHKRCHYDGGN-------GNSNGDNS------HKFDLNLPA 193

[Close]
BLAST of Carg23033 vs. TAIR10
Match: AT3G19580.1 (zinc-finger protein 2)

HSP 1 Score: 87.8 bits (216), Expect = 8.6e-18
Identity = 64/177 (36.16%), Postives = 76/177 (42.94%), Query Frame = 0 

Query: 46  PSPSPTKLPYSCSVCNKSFSSYQALGGHKSS--------XXXXXXXXXXXXXXXXXXXXX 105
           P P    LPY C+VC K+F SYQALGGHK+S                             
Sbjct: 97  PPPESKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKH 156

Query: 106 XXXXXXXTHQCSICFKCFPTGQALGGHKRRHYDGN-----NNKTLAAGSDSNGDSTLT-- 165
                   H+CSIC K FPTGQALGGHKR HY+GN                +  ST++  
Sbjct: 157 PIAASGKIHECSICHKVFPTGQALGGHKRCHYEGNLGXXXXXXXXXXXXXXSVSSTVSEE 216

Query: 166 HTHVRDFDLNVPALPEFSPRFPDSHRREKSQSQSQIREKYVEEEVQSPHPLKKPRLL 208
            +H    DLN+PALPE S                      V+EE+ SP   KKP LL
Sbjct: 217 RSHRGFIDLNLPALPELSLH----------------HNPIVDEEILSPLTGKKPLLL 257

[Close]
BLAST of Carg23033 vs. Swiss-Prot
Match: sp|Q96289|ZAT10_ARATH (Zinc finger protein ZAT10 OS=Arabidopsis thaliana OX=3702 GN=ZAT10 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.5e-23
Identity = 87/167 (52.10%), Postives = 104/167 (62.28%), Query Frame = 0 

Query: 52  KLPYSCSVCNKSFSSYQALGGHKSS-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXTH 111
           KL Y CSVC+K+FSSYQALGGHK+S          XXXXXXXXXXXXXXXXXXX    +H
Sbjct: 77  KLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSXXXXXXXXXXXXXXXXXXXGSGKSH 136

Query: 112 QCSICFKCFPTGQALGGHKRRHYDGNNNKTLAAGSDSNGDSTLTH--THVRDFDLNVPAL 171
            C+IC K FP+GQALGGHKR HY+GNNN   ++ S+S G  + +H  +  R FDLN+P +
Sbjct: 137 VCTICNKSFPSGQALGGHKRCHYEGNNNINTSSVSNSEGAGSTSHVSSSHRGFDLNIPPI 196

Query: 172 PEFSPRFPDSHRREKSQSQSQIREKYVEEEVQSPHPLKKPRLLLPVE 212
           PEFS    D                   +EV SP P KKPR   PV+
Sbjct: 197 PEFSMVNGD-------------------DEVMSPMPAKKPRFDFPVK 224

[Close]
BLAST of Carg23033 vs. Swiss-Prot
Match: sp|O22533|ZAT6_ARATH (Zinc finger protein ZAT6 OS=Arabidopsis thaliana OX=3702 GN=ZAT6 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.7e-21
Identity = 103/209 (49.28%), Postives = 124/209 (59.33%), Query Frame = 0 

Query: 27  SDDEHLAFSLLMLAHGG------NIPS--PSPTKLP------YSCSVCNKSFSSYQALGG 86
           ++DE++A  L++LA  G      ++PS   SP  LP      Y CSVC+K+FSSYQALGG
Sbjct: 47  TEDEYIALCLMLLARDGDRNRDLDLPSSXXSPPLLPPLPTPIYKCSVCDKAFSSYQALGG 106

Query: 87  HKSS--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQCSICFKCFPTGQALGGH 146
           HK+S         XXXXXXXXXXXXXXXXXXXXXXXXX  +H CSIC K F TGQALGGH
Sbjct: 107 HKASHRKSFSLTQXXXXXXXXXXXXXXXXXXXXXXXXXVKSHVCSICHKSFATGQALGGH 166

Query: 147 KRRHYDGNNNKTLAAGSDSNGDSTLTHTHV----RDFDLNVPALPEFSPRFPDSHRREKS 206
           KR HY+G N   +++ S SN +   + +HV    R FDLN+P +PEFS    D       
Sbjct: 167 KRCHYEGKNGGGVSS-SVSNSEDVGSTSHVSSGHRGFDLNIPPIPEFSMVNGD------- 226

Query: 207 QSQSQIREKYVEEEVQSPHPLKKPRLLLP 210
                       EEV SP P KK R   P
Sbjct: 227 ------------EEVMSPMPAKKLRFDFP 235

[Close]
BLAST of Carg23033 vs. Swiss-Prot
Match: sp|Q42430|ZFP1_WHEAT (Zinc finger protein 1 OS=Triticum aestivum OX=4565 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.8e-18
Identity = 76/210 (36.19%), Postives = 89/210 (42.38%), Query Frame = 0 

Query: 38  MLAHGG----NIPSP----SPTKLPYSCSVCNKSFSSYQALGGHKSSXXXXXXXXXXXXX 97
           ML+ GG      P P    +P    + CSVC KSFSSYQALGGHK+S             
Sbjct: 65  MLSRGGKQRVQAPQPESFAAPVPAEFKCSVCGKSFSSYQALGGHKTSHRVKQPSPPSDAA 124

Query: 98  XXXXXXXXXXXXXXXT-------------------HQCSICFKCFPTGQALGGHKRRHYD 157
                          +                   H+CSIC K FPTGQALGGHKR+HYD
Sbjct: 125 AAPLVALPAVAAILPSAEPATSSXAASSDGATNRVHRCSICQKEFPTGQALGGHKRKHYD 184

Query: 158 GN-------------NNKTLAAGSDSNGDSTLTHTHVRDFDLNVPALPEFSPRFPDSHRR 208
           G                     GS  NG S       R FDLN+PA+PEF  R P +  +
Sbjct: 185 GGXXXXXXXXXXXXXXXXXXEVGSTGNGSSA-----ARAFDLNIPAVPEFVWR-PCAKGK 244

[Close]
BLAST of Carg23033 vs. Swiss-Prot
Match: sp|Q9SSW1|AZF1_ARATH (Zinc finger protein AZF1 OS=Arabidopsis thaliana OX=3702 GN=AZF1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.1e-17
Identity = 67/188 (35.64%), Postives = 80/188 (42.55%), Query Frame = 0 

Query: 19  RSTHHPLDSDDEHLAFSLLMLAHGGNIPSP----------SPTKLPYSCSVCNKSFSSYQ 78
           + T+  L S++E+LA  LLMLA G  + SP                  C+VC KSFSSYQ
Sbjct: 51  QETNKNLPSEEEYLALCLLMLARGSAVQSPPLXXXXXXXXXXXXXXXKCTVCGKSFSSYQ 110

Query: 79  ALGGHKSS----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQCSICF 138
           ALGGHK+S                                             H CSICF
Sbjct: 111 ALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICF 170

Query: 139 KCFPTGQALGGHKRRHYDGNNNK----------TLAAGSDSN-------GDSTLTHTHVR 164
           K F +GQALGGHKR HYDG NN            L AGSD +        + +    H R
Sbjct: 171 KSFASGQALGGHKRCHYDGGNNXXXXXXXXXXVELVAGSDVSDVDNERWSEESAIGGH-R 230

[Close]
BLAST of Carg23033 vs. Swiss-Prot
Match: sp|Q9SSW2|AZF2_ARATH (Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.6e-16
Identity = 64/177 (36.16%), Postives = 76/177 (42.94%), Query Frame = 0 

Query: 46  PSPSPTKLPYSCSVCNKSFSSYQALGGHKSS--------XXXXXXXXXXXXXXXXXXXXX 105
           P P    LPY C+VC K+F SYQALGGHK+S                             
Sbjct: 97  PPPESKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKH 156

Query: 106 XXXXXXXTHQCSICFKCFPTGQALGGHKRRHYDGN-----NNKTLAAGSDSNGDSTLT-- 165
                   H+CSIC K FPTGQALGGHKR HY+GN                +  ST++  
Sbjct: 157 PIAASGKIHECSICHKVFPTGQALGGHKRCHYEGNLGXXXXXXXXXXXXXXSVSSTVSEE 216

Query: 166 HTHVRDFDLNVPALPEFSPRFPDSHRREKSQSQSQIREKYVEEEVQSPHPLKKPRLL 208
            +H    DLN+PALPE S                      V+EE+ SP   KKP LL
Sbjct: 217 RSHRGFIDLNLPALPELSLH----------------HNPIVDEEILSPLTGKKPLLL 257

[Close]
BLAST of Carg23033 vs. TrEMBL
Match: tr|A0A0A0K2F6|A0A0A0K2F6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071440 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.7e-42
Identity = 121/255 (47.45%), Postives = 135/255 (52.94%), Query Frame = 0 

Query: 1   MALQALN--SSTEP-------------WVKPSK-RSTHHPLDSDDEHLAFSLLMLAHG-- 60
           MALQALN  SST P             W+KPSK RS     DSDDE+LAF LLMLA G  
Sbjct: 1   MALQALNSPSSTFPLADPSLDHHHHDSWIKPSKPRSKRPRFDSDDEYLAFCLLMLARGRI 60

Query: 61  --------------------GNIPSPSPTKLPYSCSVCNKSFSSYQALGGHKSS-XXXXX 120
                                        KL Y+C+VCNKSFSSYQALGGHK+S      
Sbjct: 61  SHSXXXXXXXXXXXXXXXXXXXXXXXXXXKLTYNCNVCNKSFSSYQALGGHKASHRKSDA 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXTHQCSICFKCFPTGQALGGHKRRHYDG-----NNNKT 180
                                  THQCSICFKCFPTGQALGGHKRRHYDG          
Sbjct: 121 GDNNVSPVVSSTLSNSTLGGGVKTHQCSICFKCFPTGQALGGHKRRHYDGXXXXXXXXXX 180

Query: 181 LAAGSDSNGDSTLTHTHVRDFDLNVPALPEFSPRFPDSHRREKSQSQSQIREKYVEEEVQ 212
                       LT TH R+FDLN+PALPE  P F   +RR+KSQSQSQ  E   ++EV+
Sbjct: 181 XXXXXXXXXXXXLTQTHHRNFDLNIPALPELWPGFTAGNRRKKSQSQSQ--EYSTDQEVE 240

[Close]
BLAST of Carg23033 vs. TrEMBL
Match: tr|A0A0L9UI50|A0A0L9UI50_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g243200 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.0e-33
Identity = 114/249 (45.78%), Postives = 131/249 (52.61%), Query Frame = 0 

Query: 1   MALQALNSST------------------EPWVKPSK----RSTHHPLDSDDEHLAFSLLM 60
           MALQAL S T                   PW K  +    R   HP  +++E+LA  L+M
Sbjct: 1   MALQALQSPTAANPSFTPFEEDTLTYLDTPWAKGKRSKRPRMDQHPSCTEEEYLALCLIM 60

Query: 61  LAHGG-----------------NIPSPSPTKLPYSCSVCNKSFSSYQALGGHKSSXXXXX 120
           LA GG                 N  +P P KL Y CSVCNK+FSSYQALGGHK+S     
Sbjct: 61  LARGGSRAPAPIPTAAKPALSDNNSAPLPAKLSYKCSVCNKAFSSYQALGGHKASHRKLS 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXTHQCSICFKCFPTGQALGGHKRRHYDGNNNKTLAAGS 180
                  XXXXXXXXXXXXXXX TH+CSIC K FPTGQALGGHKR HY+G      A  +
Sbjct: 121 GAGEDQPXXXXXXXXXXXXXXXRTHECSICHKTFPTGQALGGHKRCHYEGGGGGNSAVTA 180

Query: 181 DSNGDSTLTHTHVRDFDLNVPALPEFSPRFPDSHRREKSQSQSQIREKYVEEEVQSPHPL 211
                ST T +H RDFDLN+PA P+F  RF                    +EEV SPHP 
Sbjct: 181 SEGVGSTHTGSH-RDFDLNLPAFPDFPTRFS------------------TDEEVSSPHPS 230

[Close]
BLAST of Carg23033 vs. TrEMBL
Match: tr|A0A0S3RBB9|A0A0S3RBB9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G051800 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 8.8e-33
Identity = 106/220 (48.18%), Postives = 123/220 (55.91%), Query Frame = 0 

Query: 12  PWVKPSK----RSTHHPLDSDDEHLAFSLLMLAHGG-----------------NIPSPSP 71
           PW K  +    R   HP  +++E+LA  L+MLA GG                 N  +P P
Sbjct: 87  PWAKGKRSKRPRMDQHPSCTEEEYLALCLIMLARGGSRAPAPIPTAAKPALSDNNSAPLP 146

Query: 72  TKLPYSCSVCNKSFSSYQALGGHKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQCSI 131
            KL Y CSVCNK+FSSYQALGGHK+S            XXXXXXXXXXXXXXX TH+CSI
Sbjct: 147 AKLSYKCSVCNKAFSSYQALGGHKASHRKLSGAGEDQPXXXXXXXXXXXXXXXRTHECSI 206

Query: 132 CFKCFPTGQALGGHKRRHYDGNNNKTLAAGSDSNGDSTLTHTHVRDFDLNVPALPEFSPR 191
           C K FPTGQALGGHKR HY+G      A  +     ST T +H RDFDLN+PA P+F  R
Sbjct: 207 CHKTFPTGQALGGHKRCHYEGGGGGNSAVTASEGVGSTHTGSH-RDFDLNLPAFPDFPTR 266

Query: 192 FPDSHRREKSQSQSQIREKYVEEEVQSPHPLKKPRLLLPV 211
           F                    +EEV SPHP KKPRL L +
Sbjct: 267 FS------------------TDEEVSSPHPSKKPRLHLTI 287

[Close]
BLAST of Carg23033 vs. TrEMBL
Match: tr|A0A1S3CSQ4|A0A1S3CSQ4_CUCME (zinc finger protein ZAT10-like OS=Cucumis melo OX=3656 GN=LOC103504520 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.0e-32
Identity = 106/264 (40.15%), Postives = 124/264 (46.97%), Query Frame = 0 

Query: 1   MALQALNSSTE-------------------PWVKPSK-RSTHHPLDSDDEHLAFSLLMLA 60
           MALQALNS +                    PW+KPSK RS     DSDDE+LAF LLMLA
Sbjct: 1   MALQALNSPSSTFPLTDPSALDXXXXXXXXPWIKPSKPRSKRPRFDSDDEYLAFCLLMLA 60

Query: 61  HGGNIPSPSPT---------------------KLPYSCSVCNKSFSSYQALGGHKSS--- 120
            G    S   +                     KL Y+C+VCNKSFSSYQALGGHK+S   
Sbjct: 61  RGRISRSDHHSTXXXXXXXXXXXXXXXXXXXXKLAYNCNVCNKSFSSYQALGGHKASHRK 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQCSICFKCFPTGQALGGHKR-------RHY 180
                                       THQCSICFKCFPTGQALGGHKR          
Sbjct: 121 SDAGENNNVPPVVSTTLSNSTVGSGGSRTHQCSICFKCFPTGQALGGHKRXXXXXXXXXX 180

Query: 181 DGNNNKTLAAGSDSNGDSTLTHTHVRDFDLNVPALPEFSPRFPDSHRREKS--QSQSQIR 212
                                 TH R+FDLN+PALP+  P F   +R++KS         
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXQTHHRNFDLNIPALPDLWPGFTAGNRQKKSXXXXXXXXX 240

[Close]
BLAST of Carg23033 vs. TrEMBL
Match: tr|A0A2R6Q5W4|A0A2R6Q5W4_ACTCH (Zinc finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc21054 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.3e-32
Identity = 99/224 (44.20%), Postives = 122/224 (54.46%), Query Frame = 0 

Query: 1   MALQALNSST----------EPWV--KPSKRSTHHPLDSDDEHLAFSLLMLAHGGNIPSP 60
           MAL+ALNS T          EPW   K SKR       +++E+LA  L+MLA GG   SP
Sbjct: 1   MALEALNSPTTPTPQPPRFDEPWTKGKRSKRPRTETPPTEEEYLALCLIMLARGGATSSP 60

Query: 61  SPT---KLPYSCSVCNKSFSSYQALGGHKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXT 120
             T   K  Y CSVC KSF SYQALGGHK+S                             
Sbjct: 61  VATTDQKNSYKCSVCGKSFLSYQALGGHKASHRKLVAASATAEDHSSTSAGAALNPTGRV 120

Query: 121 HQCSICFKCFPTGQALGGHKRRHYDGNNNKTLAAGSDSNGDSTLTHTHVRDFDLNVPALP 180
           H+CSIC + FPTGQALGGHKRRHY+G++    +  + S GD + +H+H R FDLN+PALP
Sbjct: 121 HECSICHRSFPTGQALGGHKRRHYEGSSTGGGSGVTSSEGDGS-SHSH-RGFDLNLPALP 180

Query: 181 EFSPRFPDSHRREKSQSQSQIREKYVEEEVQSPHPLKKPRLLLP 210
           E  P       R     +SQ+    VE+EV+SP P+KKPRL  P
Sbjct: 181 ESVPEL-----RVDCGRKSQLP---VEQEVESPLPVKKPRLPSP 214

The following BLAST results are available for this feature:
BLAST of Carg23033 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022988946.13.0e-7783.33zinc finger protein ZAT10-like [Cucurbita maxima][more]
XP_022927730.12.8e-5461.61zinc finger protein ZAT10 [Cucurbita moschata][more]
XP_023531765.11.1e-4758.77zinc finger protein ZAT10-like [Cucurbita pepo subsp. pepo][more]
XP_004137088.14.1e-4247.45PREDICTED: zinc finger protein ZAT10 [Cucumis sativus] >KGN43855.1 hypothetical ... [more]
XP_022972550.17.3e-3956.94zinc finger protein AZF3-like [Cucurbita maxima][more]
BLAST of Carg23033 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G27730.14.7e-2452.10salt tolerance zinc finger[more]
AT5G04340.11.5e-2249.28zinc finger of Arabidopsis thaliana 6[more]
AT5G67450.12.3e-1835.64zinc-finger protein 1[more]
AT3G49930.15.1e-1846.02C2H2 and C2HC zinc fingers superfamily protein[more]
AT3G19580.18.6e-1836.16zinc-finger protein 2[more]
BLAST of Carg23033 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q96289|ZAT10_ARATH8.5e-2352.10Zinc finger protein ZAT10 OS=Arabidopsis thaliana OX=3702 GN=ZAT10 PE=2 SV=1[more]
sp|O22533|ZAT6_ARATH2.7e-2149.28Zinc finger protein ZAT6 OS=Arabidopsis thaliana OX=3702 GN=ZAT6 PE=2 SV=1[more]
sp|Q42430|ZFP1_WHEAT2.8e-1836.19Zinc finger protein 1 OS=Triticum aestivum OX=4565 PE=2 SV=1[more]
sp|Q9SSW1|AZF1_ARATH4.1e-1735.64Zinc finger protein AZF1 OS=Arabidopsis thaliana OX=3702 GN=AZF1 PE=2 SV=1[more]
sp|Q9SSW2|AZF2_ARATH1.6e-1636.16Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1[more]
BLAST of Carg23033 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K2F6|A0A0A0K2F6_CUCSA2.7e-4247.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071440 PE=4 SV=1[more]
tr|A0A0L9UI50|A0A0L9UI50_PHAAN4.0e-3345.78Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g243200 PE... [more]
tr|A0A0S3RBB9|A0A0S3RBB9_PHAAN8.8e-3348.18Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G... [more]
tr|A0A1S3CSQ4|A0A1S3CSQ4_CUCME2.0e-3240.15zinc finger protein ZAT10-like OS=Cucumis melo OX=3656 GN=LOC103504520 PE=4 SV=1[more]
tr|A0A2R6Q5W4|A0A2R6Q5W4_ACTCH3.3e-3244.20Zinc finger protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Ac... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23033-RACarg23033-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 55..77
e-value: 0.01
score: 25.0
coord: 106..128
e-value: 0.5
score: 19.4
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 57..77
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 108..128
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 106..133
score: 8.808
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 55..82
score: 10.741
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 105..130
e-value: 8.0E-9
score: 35.2
coord: 55..79
e-value: 4.5E-13
score: 48.7
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 52..128
e-value: 2.7E-10
score: 42.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..200
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 27..207
NoneNo IPR availablePANTHERPTHR26374:SF263ZINC FINGER PROTEIN AZF2coord: 27..207
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 54..128