CmoCh19G005460 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G005460
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Location	Cmo_Chr19 : 6305743 .. 6306245 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTTTCAACCTCTCCCTCCTCCTATTCTATGTCCTGAGCTTTGCCATGCTTCCCTCGTCTCTCGCTCAAGACTCACCTCAAGACTTTCTCAATGCCCACAACAAAGCCCGTGCCGAAGTTGGTGTTGGGCCAGTCCAGTGGGACGAAATGCTAGCTAATGTTGCCAACCAATGCATAAAAAACTGTAAACCAGTGCCTTCATCGGGACCATATGGGGAAAATATTGCACAAGGTAAACCTGACTTATCAGGCACTGCTGCAGTTGAAGAGTGGGTCAATGAGAAGCAATTCTATAATCGTAGCACCAATACTTATGTAGTTGGCCGGATGTGTAGTCATTACACTCAAGTGTGGTTTGGAGAAAATCACTGAAAATTGGATGTGCTAAAGTTAGATGCACACCTACTACATTCATCTGTTGCATCTATAATCCACGAGGTAATATCGCAGGTGAAAGGCCATTCAATACTGATCCGTTAATCAGAATAGCTAAATAA

mRNA sequence

ATGGATCTTTTCAACCTCTCCCTCCTCCTATTCTATGTCCTGAGCTTTGCCATGCTTCCCTCGTCTCTCGCTCAAGACTCACCTCAAGACTTTCTCAATGCCCACAACAAAGCCCGTGCCGAAGTTGGTGTTGGGCCAGTCCAGTGGGACGAAATGCTAGCTAATGTTGCCAACCAATGCATAAAAAACTGTAAACCAGTGCCTTCATCGGGACCATATGGGGAAAATATTGCACAAGGTAAACCTGACTTATCAGGCACTGCTGCAGTTGAAGAGTGGGTCAATGAGAAGCAATTCTATAATCGTAGCACCAATACTTATTCATTACACTCAAGTGTGGTTTGGAGAAAATCACTGAAAATTGGATGTGCTAAAGTTAGATGCACACCTACTACATTCATCTGTTGCATCTATAATCCACGAGGTAATATCGCAGGTGAAAGGCCATTCAATACTGATCCGTTAATCAGAATAGCTAAATAA

Coding sequence (CDS)

ATGGATCTTTTCAACCTCTCCCTCCTCCTATTCTATGTCCTGAGCTTTGCCATGCTTCCCTCGTCTCTCGCTCAAGACTCACCTCAAGACTTTCTCAATGCCCACAACAAAGCCCGTGCCGAAGTTGGTGTTGGGCCAGTCCAGTGGGACGAAATGCTAGCTAATGTTGCCAACCAATGCATAAAAAACTGTAAACCAGTGCCTTCATCGGGACCATATGGGGAAAATATTGCACAAGGTAAACCTGACTTATCAGGCACTGCTGCAGTTGAAGAGTGGGTCAATGAGAAGCAATTCTATAATCGTAGCACCAATACTTATTCATTACACTCAAGTGTGGTTTGGAGAAAATCACTGAAAATTGGATGTGCTAAAGTTAGATGCACACCTACTACATTCATCTGTTGCATCTATAATCCACGAGGTAATATCGCAGGTGAAAGGCCATTCAATACTGATCCGTTAATCAGAATAGCTAAATAA

Homology

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BLAST of CmoCh19G005460 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 3.3e-35
Identity = 77/152 (50.66%), Postives = 101/152 (66.45%), Query Frame = 1


Query: 8   LLLFYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLA----NVANQCIKN 67
           L++F  L  A++  S AQDSPQD+L  HN+AR  VGVGP+QWDE +A    + A Q   N
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 68  CKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYS----LHSSVVWRKSL 127
           C+ + S GPYGEN+A G  DLSG +AV  WV+EK  YN + NT +     ++ VVWRKS+
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNGVCGHYTQVVWRKSV 129

Query: 128 KIGCAKVRC-TPTTFICCIYNPRGNIAGERPF 151
           ++GCAKVRC    T I C Y+PRGN   E+P+
Sbjct: 130 RLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

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BLAST of CmoCh19G005460 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.1e-34
Identity = 77/152 (50.66%), Postives = 102/152 (67.11%), Query Frame = 1


Query: 8   LLLFYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLA----NVANQCIKN 67
           L++   L  A++    AQDS QD++NAHN+AR+++GVGP+QWDE LA    N ANQ   +
Sbjct: 10  LIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGD 69

Query: 68  CKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYS----LHSSVVWRKSL 127
           C+ V S GPYGEN+A+   DLSG AAV  WVNEK  YN  TNT +     ++ VVWR S+
Sbjct: 70  CRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNGVCGHYTQVVWRNSV 129

Query: 128 KIGCAKVRC-TPTTFICCIYNPRGNIAGERPF 151
           ++GCAKVRC    T I C Y+P GN A ++P+
Sbjct: 130 RLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmoCh19G005460 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.7e-31
Identity = 73/156 (46.79%), Postives = 102/156 (65.38%), Query Frame = 1


Query: 6   LSLLLFYVLSFAML-PSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLA----NVANQC 65
           L+ ++   ++FA+L  SS AQ+SPQD+LN HN AR +VGVGP+ WD  LA    N ANQ 
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 66  IKNCKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNT-----YSLHSSVVW 125
           I +C  + S GPYGEN+A   P L+   AV+ WV+EK+FY+ ++N+        ++ VVW
Sbjct: 64  IGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVW 123

Query: 126 RKSLKIGCAKVRC-TPTTFICCIYNPRGNIAGERPF 151
           R S+++GCA+VR      FI C Y+P GN  G+RPF
Sbjct: 124 RNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of CmoCh19G005460 vs. Swiss-Prot
Match: PR04_SOLLC (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.5e-29
Identity = 73/161 (45.34%), Postives = 98/161 (60.87%), Query Frame = 1


Query: 1   MDLFNLSLLLFYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLA----NV 60
           M LFN+SLLL  ++  A+  S  AQ+SPQD+L  HN ARA+VGVGP+ WD  LA    N 
Sbjct: 1   MGLFNISLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNY 60

Query: 61  ANQCIKNCKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTN------TYSLH 120
           AN    +C  + S    GEN+A+G  D +G AAV+ WV+E+  YN +TN          +
Sbjct: 61  ANSRAGDCNLIHSGA--GENLAKGGGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHY 120

Query: 121 SSVVWRKSLKIGCAKVRC-TPTTFICCIYNPRGNIAGERPF 151
           + VVWR S+++GC + RC     FI C Y+P GN  GERP+
Sbjct: 121 TQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWVGERPY 159

[Close]

BLAST of CmoCh19G005460 vs. Swiss-Prot
Match: PR12_HORVU (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.5e-29
Identity = 73/159 (45.91%), Postives = 93/159 (58.49%), Query Frame = 1


Query: 6   LSLLLFYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEML----ANVANQCI 65
           L++LL   ++ AM+  S AQ+SPQD+++ HN AR+ VGVG V W   L     N ANQ I
Sbjct: 6   LAILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRI 65

Query: 66  KNCKPVPSSGPYGENIAQGK--PDLSGTAAVEEWVNEKQFYNRSTNTYSL------HSSV 125
            +CK   S GPYGENI  G    D     AV  WVNEK+ YN  +NT +       ++ V
Sbjct: 66  NDCKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQV 125

Query: 126 VWRKSLKIGCAKVRCTPT--TFICCIYNPRGNIAGERPF 151
           VWR S  IGCA+V C      FI C Y PRGNI G++P+
Sbjct: 126 VWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

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BLAST of CmoCh19G005460 vs. TrEMBL
Match: A0A0A0K6A4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.3e-43
Identity = 97/158 (61.39%), Postives = 115/158 (72.78%), Query Frame = 1


Query: 5   NLSLLLFYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLAN----VANQC 64
           +LSL LF VL+F MLPSSLAQDSPQDFL+AHN ARA+ GV PVQWDE +A+     ANQ 
Sbjct: 7   SLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQR 66

Query: 65  IKNCKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYSL------HSSVV 124
           I +C  V S GPYGENIA G PDLSGTAAVE WVNEK+FY+  +NT +       ++ VV
Sbjct: 67  INDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVV 126

Query: 125 WRKSLKIGCAKVRCTPT--TFICCIYNPRGNIAGERPF 151
           WR S++IGCAKV CT    TFI C Y+P GN  G+RP+
Sbjct: 127 WRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

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BLAST of CmoCh19G005460 vs. TrEMBL
Match: A0A0A0K2V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-42
Identity = 92/163 (56.44%), Postives = 121/163 (74.23%), Query Frame = 1


Query: 1   MDLFNLSLLLFYVLS-FAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLAN---- 60
           MDL NLS +LF VLS F MLPSSLAQDSPQD++N+HN ARA VGVGP++WDE +AN    
Sbjct: 1   MDLLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRY 60

Query: 61  VANQCIKNCKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYSL------ 120
            AN+ + +C+ V S+GPYGENIA G PDLSG  AV+ WV+EKQ+YN ++N+ +       
Sbjct: 61  YANKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGH 120

Query: 121 HSSVVWRKSLKIGCAKVRCTPT--TFICCIYNPRGNIAGERPF 151
           ++ VVW+ S+++GCAKV+C      FI C Y+PRGNI G+RP+
Sbjct: 121 YTQVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of CmoCh19G005460 vs. TrEMBL
Match: A0A0A0K2D5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070510 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.7e-38
Identity = 93/166 (56.02%), Postives = 116/166 (69.88%), Query Frame = 1


Query: 1   MDLF---NLSLLL--FYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLAN 60
           MDLF   +LSLLL     +  +MLP S AQDS Q+F++AHN ARAEVGVGPV W+E +A+
Sbjct: 1   MDLFKYISLSLLLSPLSFIMLSMLPFSSAQDSIQNFVDAHNTARAEVGVGPVHWNETVAD 60

Query: 61  VA----NQCIKNCKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYSL-- 120
            A    N+ IK+C  V S GPYGENIA G  +L+GT AV  WVNEKQFYN  TN+  +  
Sbjct: 61  YARRYANKRIKDCNLVHSKGPYGENIAWGSRNLAGTVAVRMWVNEKQFYNYETNSCVIGK 120

Query: 121 ----HSSVVWRKSLKIGCAKVRC-TPTTFICCIYNPRGNIAGERPF 151
               ++ VVWR S++IGCAKVRC +  TFI C Y+PRGNI G+RP+
Sbjct: 121 MCGHYTQVVWRNSVRIGCAKVRCRSGGTFITCNYDPRGNIRGQRPY 166

[Close]

BLAST of CmoCh19G005460 vs. TrEMBL
Match: A0A0A0K7P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070254 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.4e-37
Identity = 84/161 (52.17%), Postives = 109/161 (67.70%), Query Frame = 1


Query: 1   MDLFNLSLLLFYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLAN----V 60
           M + +LSLL F   S  +  SS+AQD PQ+F++AHN ARA+VGVGPV WDE +AN     
Sbjct: 5   MKMISLSLLFFLTSSTILFTSSIAQDLPQNFVDAHNAARAQVGVGPVSWDETVANYAQQY 64

Query: 61  ANQCIKNCKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNT-----YSLHS 120
           ANQ I +C+ V S+GPYGEN+A    DLSGT AV+ WVNEKQFY+ ++N+        ++
Sbjct: 65  ANQHINDCQMVHSNGPYGENLAWSSADLSGTNAVQMWVNEKQFYDYASNSCVRSECRHYT 124

Query: 121 SVVWRKSLKIGCAKVRCTPT--TFICCIYNPRGNIAGERPF 151
            VVW+ S+KIGCAKV C     TFI C Y+P GN   +RP+
Sbjct: 125 QVVWKNSVKIGCAKVECNNNGGTFITCNYDPSGNYVNQRPY 165

[Close]

BLAST of CmoCh19G005460 vs. TrEMBL
Match: H3K3Z1_CUCME (Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-36
Identity = 81/130 (62.31%), Postives = 95/130 (73.08%), Query Frame = 1


Query: 25  QDSPQDFLNAHNKARAEVGVGPVQWDEMLANVA----NQCIKNCKPVPSSGPYGENIAQG 84
           QDSP+DF+NAHN ARA+VGVGPV WDE +A+ A    NQ I +C+ V S GPYGENIA G
Sbjct: 1   QDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQRINDCRLVHSGGPYGENIAWG 60

Query: 85  KPDLSGTAAVEEWVNEKQFYNRSTNTYSL------HSSVVWRKSLKIGCAKVRCTPT--T 143
            PDLSGTAAV+ WVNEKQFYN  +NT +       ++ VVWR S++IGCAKVRCT    T
Sbjct: 61  MPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVVWRNSVRIGCAKVRCTNNRGT 120

[Close]

BLAST of CmoCh19G005460 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 149.4 bits (376), Expect = 1.8e-36
Identity = 77/152 (50.66%), Postives = 101/152 (66.45%), Query Frame = 1


Query: 8   LLLFYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLA----NVANQCIKN 67
           L++F  L  A++  S AQDSPQD+L  HN+AR  VGVGP+QWDE +A    + A Q   N
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 68  CKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYS----LHSSVVWRKSL 127
           C+ + S GPYGEN+A G  DLSG +AV  WV+EK  YN + NT +     ++ VVWRKS+
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNGVCGHYTQVVWRKSV 129

Query: 128 KIGCAKVRC-TPTTFICCIYNPRGNIAGERPF 151
           ++GCAKVRC    T I C Y+PRGN   E+P+
Sbjct: 130 RLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh19G005460 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-35
Identity = 77/152 (50.66%), Postives = 102/152 (67.11%), Query Frame = 1


Query: 8   LLLFYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLA----NVANQCIKN 67
           L++   L  A++    AQDS QD++NAHN+AR+++GVGP+QWDE LA    N ANQ   +
Sbjct: 10  LIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGD 69

Query: 68  CKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYS----LHSSVVWRKSL 127
           C+ V S GPYGEN+A+   DLSG AAV  WVNEK  YN  TNT +     ++ VVWR S+
Sbjct: 70  CRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNGVCGHYTQVVWRNSV 129

Query: 128 KIGCAKVRC-TPTTFICCIYNPRGNIAGERPF 151
           ++GCAKVRC    T I C Y+P GN A ++P+
Sbjct: 130 RLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmoCh19G005460 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 137.1 bits (344), Expect = 9.4e-33
Identity = 78/163 (47.85%), Postives = 102/163 (62.58%), Query Frame = 1


Query: 1   MDLFNLSLLLFYVLSF--AMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLA---- 60
           M +FN S  LF  ++F   ++    AQDSPQDFL  HN+ARAEVGVGP++WDE +A    
Sbjct: 1   MKIFNSSQNLFLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYAR 60

Query: 61  NVANQCIKNCKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYSL----- 120
           N ANQ   +C    SSG YGENIA     ++G AAV+ WV+E+  Y+  +NT +      
Sbjct: 61  NYANQRKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCG 120

Query: 121 -HSSVVWRKSLKIGCAKVRC-TPTTFICCIYNPRGNIAGERPF 151
            ++ VVWR S ++GCAKVRC    TFI C Y+P GN  GE P+
Sbjct: 121 HYTQVVWRNSERLGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmoCh19G005460 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-31
Identity = 69/154 (44.81%), Postives = 100/154 (64.94%), Query Frame = 1


Query: 10  LFYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLA----NVANQCIKNCK 69
           + ++L+ A+   SLA+D  Q FL AHN+AR EVG+ P+ WD+ +A    + ANQ I +C 
Sbjct: 8   ILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCA 67

Query: 70  PVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYS-------LH-SSVVWRK 129
            V S+GP+GENIA    ++S   A E W+NEKQ+Y+  +NT +       LH + VVW+ 
Sbjct: 68  LVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKN 127

Query: 130 SLKIGCAKVRC-TPTTFICCIYNPRGNIAGERPF 151
           ++++GCAKV C +  TFI C Y+P GN  GE+PF
Sbjct: 128 TVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of CmoCh19G005460 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 72/162 (44.44%), Postives = 102/162 (62.96%), Query Frame = 1


Query: 1   MDLFNLSLLLFYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLA----NV 60
           M+ F    L+   +SF ++ ++ AQ++PQD+LN+HN ARA+VGV  V WD  LA    N 
Sbjct: 1   MNTFKTPFLVIVAISFLVVATN-AQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNY 60

Query: 61  ANQCIKNCKPVPSSGPYGENIAQG-KPDLSGTAAVEEWVNEKQFYNRSTNTYS-----LH 120
           +N    +C  V S+GPYGEN+A+G     S  +AV+ WV+EK +Y+ + N  +     LH
Sbjct: 61  SNFRKADCNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLH 120

Query: 121 -SSVVWRKSLKIGCAKVRCTPT-TFICCIYNPRGNIAGERPF 151
            + VVWR S+KIGCA+V+CT T  F+ C YN  GN  GE P+
Sbjct: 121 YTQVVWRDSVKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmoCh19G005460 vs. NCBI nr
Match: gi|659110129|ref|XP_008455064.1| (PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo])

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-46
Identity = 100/158 (63.29%), Postives = 119/158 (75.32%), Query Frame = 1


Query: 5   NLSLLLFYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLAN----VANQC 64
           +LSL LF VL+F MLPSSLAQDSP+DF+NAHN ARA+VGVGPV WDE +A+     ANQ 
Sbjct: 7   SLSLSLFCVLTFIMLPSSLAQDSPRDFVNAHNAARAQVGVGPVHWDERVASFARQYANQR 66

Query: 65  IKNCKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYSL------HSSVV 124
           I +C+ V S GPYGENIA G PDLSGTAAV+ WVNEKQFYN  +NT +       ++ VV
Sbjct: 67  INDCRLVHSGGPYGENIAWGMPDLSGTAAVQMWVNEKQFYNYGSNTCAAGKVCGHYTQVV 126

Query: 125 WRKSLKIGCAKVRCTPT--TFICCIYNPRGNIAGERPF 151
           WR S++IGCAKVRCT    TFI C Y PRGNI G++P+
Sbjct: 127 WRNSVRIGCAKVRCTNNRGTFIICNYEPRGNIIGQKPY 164

[Close]

BLAST of CmoCh19G005460 vs. NCBI nr
Match: gi|778724783|ref|XP_011658861.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 3.2e-43
Identity = 97/158 (61.39%), Postives = 115/158 (72.78%), Query Frame = 1


Query: 5   NLSLLLFYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLAN----VANQC 64
           +LSL LF VL+F MLPSSLAQDSPQDFL+AHN ARA+ GV PVQWDE +A+     ANQ 
Sbjct: 7   SLSLSLFCVLTFFMLPSSLAQDSPQDFLDAHNTARAQDGVEPVQWDETVASFALQYANQR 66

Query: 65  IKNCKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYSL------HSSVV 124
           I +C  V S GPYGENIA G PDLSGTAAVE WVNEK+FY+  +NT +       ++ VV
Sbjct: 67  INDCSLVHSGGPYGENIAWGMPDLSGTAAVEMWVNEKEFYDYGSNTCAASRVCGHYTQVV 126

Query: 125 WRKSLKIGCAKVRCTPT--TFICCIYNPRGNIAGERPF 151
           WR S++IGCAKV CT    TFI C Y+P GN  G+RP+
Sbjct: 127 WRNSVRIGCAKVICTNNGGTFITCNYDPPGNFVGQRPY 164

[Close]

BLAST of CmoCh19G005460 vs. NCBI nr
Match: gi|778724786|ref|XP_004136929.2| (PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-42
Identity = 92/163 (56.44%), Postives = 121/163 (74.23%), Query Frame = 1


Query: 1   MDLFNLSLLLFYVLS-FAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLAN---- 60
           MDL NLS +LF VLS F MLPSSLAQDSPQD++N+HN ARA VGVGP++WDE +AN    
Sbjct: 1   MDLLNLSCILFCVLSCFTMLPSSLAQDSPQDYVNSHNHARAAVGVGPIKWDEKVANYSRY 60

Query: 61  VANQCIKNCKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYSL------ 120
            AN+ + +C+ V S+GPYGENIA G PDLSG  AV+ WV+EKQ+YN ++N+ +       
Sbjct: 61  YANKRMNDCRLVHSNGPYGENIAWGSPDLSGINAVKLWVDEKQYYNYNSNSCASGKVCGH 120

Query: 121 HSSVVWRKSLKIGCAKVRCTPT--TFICCIYNPRGNIAGERPF 151
           ++ VVW+ S+++GCAKV+C      FI C Y+PRGNI G+RP+
Sbjct: 121 YTQVVWKNSMRLGCAKVKCKNKGGAFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of CmoCh19G005460 vs. NCBI nr
Match: gi|659110127|ref|XP_008455062.1| (PREDICTED: pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 175.6 bits (444), Expect = 6.8e-41
Identity = 92/163 (56.44%), Postives = 118/163 (72.39%), Query Frame = 1


Query: 1   MDLFNLSLLLFYVLS-FAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLANV--- 60
           MDL NLS +LF VL+ F MLPSSLAQDSPQD+LN HN+ARA V V  +QWDE +AN    
Sbjct: 1   MDLLNLSFILFCVLNCFTMLPSSLAQDSPQDYLNGHNQARAAVRVRLIQWDEKVANYSRQ 60

Query: 61  -ANQCIKNCKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYSL------ 120
            AN  + +C+ V S+GPYGENIA G PDLSGT AV+ WVNEKQ+Y+ +TN+ +       
Sbjct: 61  YANLRMNDCRLVHSNGPYGENIAWGSPDLSGTDAVKLWVNEKQYYDYNTNSCASGKVCGH 120

Query: 121 HSSVVWRKSLKIGCAKVRCTPT--TFICCIYNPRGNIAGERPF 151
           ++ VVW+ S+++GCAKV+C      FI C Y+PRGNI G+RP+
Sbjct: 121 YTQVVWKNSVRLGCAKVKCRNKGGVFIVCNYDPRGNIVGQRPY 163

[Close]

BLAST of CmoCh19G005460 vs. NCBI nr
Match: gi|700188602|gb|KGN43835.1| (hypothetical protein Csa_7G070510 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 5.4e-38
Identity = 93/166 (56.02%), Postives = 116/166 (69.88%), Query Frame = 1


Query: 1   MDLF---NLSLLL--FYVLSFAMLPSSLAQDSPQDFLNAHNKARAEVGVGPVQWDEMLAN 60
           MDLF   +LSLLL     +  +MLP S AQDS Q+F++AHN ARAEVGVGPV W+E +A+
Sbjct: 1   MDLFKYISLSLLLSPLSFIMLSMLPFSSAQDSIQNFVDAHNTARAEVGVGPVHWNETVAD 60

Query: 61  VA----NQCIKNCKPVPSSGPYGENIAQGKPDLSGTAAVEEWVNEKQFYNRSTNTYSL-- 120
            A    N+ IK+C  V S GPYGENIA G  +L+GT AV  WVNEKQFYN  TN+  +  
Sbjct: 61  YARRYANKRIKDCNLVHSKGPYGENIAWGSRNLAGTVAVRMWVNEKQFYNYETNSCVIGK 120

Query: 121 ----HSSVVWRKSLKIGCAKVRC-TPTTFICCIYNPRGNIAGERPF 151
               ++ VVWR S++IGCAKVRC +  TFI C Y+PRGNI G+RP+
Sbjct: 121 MCGHYTQVVWRNSVRIGCAKVRCRSGGTFITCNYDPRGNIRGQRPY 166

The following BLAST results are available for this feature:

BLAST of CmoCh19G005460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR1_ARATH	3.3e-35	50.66	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]
PRB1_ARATH	2.1e-34	50.66	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PRB1_TOBAC	3.7e-31	46.79	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR04_SOLLC	4.5e-29	45.34	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1	[more]
PR12_HORVU	4.5e-29	45.91	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1	[more]

BLAST of CmoCh19G005460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6A4_CUCSA	2.3e-43	61.39	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070253 PE=3 SV=1	[more]
A0A0A0K2V9_CUCSA	1.1e-42	56.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070255 PE=3 SV=1	[more]
A0A0A0K2D5_CUCSA	3.7e-38	56.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070510 PE=3 SV=1	[more]
A0A0A0K7P0_CUCSA	5.4e-37	52.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070254 PE=3 SV=1	[more]
H3K3Z1_CUCME	2.0e-36	62.31	Pathogenesis-related protein 1-1a (Fragment) OS=Cucumis melo GN=PR1-1a PE=2 SV=1	[more]

BLAST of CmoCh19G005460 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14610.1	1.8e-36	50.66	pathogenesis-related gene 1	[more]
AT2G14580.1	1.2e-35	50.66	basic pathogenesis-related protein 1	[more]
AT4G33720.1	9.4e-33	47.85	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT3G19690.1	1.0e-31	44.81	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT1G50060.1	1.1e-28	44.44	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]

BLAST of CmoCh19G005460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110129\|ref\|XP_008455064.1\|	1.1e-46	63.29	PREDICTED: pathogenesis-related protein PRB1-2-like [Cucumis melo]	[more]
gi\|778724783\|ref\|XP_011658861.1\|	3.2e-43	61.39	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|778724786\|ref\|XP_004136929.2\|	1.6e-42	56.44	PREDICTED: pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|659110127\|ref\|XP_008455062.1\|	6.8e-41	56.44	PREDICTED: pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|700188602\|gb\|KGN43835.1\|	5.4e-38	56.02	hypothetical protein Csa_7G070510 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G005460.1	CmoCh19G005460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 47..65 score: 1.0E-9coord: 107..123 score: 1.0E-9coord: 133..146 score: 1.0E-9coord: 89..102 score: 1.
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 1..158 score: 9.5
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 20..151 score: 2.6
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 32..138 score: 9.4
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 26..146 score: 7.3
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 15..150 score: 1.22
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 1..158 score: 9.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G005460	Lsi03G009970	Bottle gourd (USVL1VR-Ls)	cmolsiB467

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G005460	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G005460	Cucurbita pepo (Zucchini)	cmocpeB494
CmoCh19G005460	Bottle gourd (USVL1VR-Ls)	cmolsiB468
CmoCh19G005460	Cucumber (Gy14) v2	cgybcmoB928
CmoCh19G005460	Melon (DHL92) v3.6.1	cmomedB523
CmoCh19G005460	Melon (DHL92) v3.6.1	cmomedB550
CmoCh19G005460	Silver-seed gourd	carcmoB0615
CmoCh19G005460	Silver-seed gourd	carcmoB0998
CmoCh19G005460	Cucumber (Chinese Long) v3	cmocucB0623
CmoCh19G005460	Watermelon (97103) v2	cmowmbB505
CmoCh19G005460	Watermelon (97103) v2	cmowmbB512
CmoCh19G005460	Wax gourd	cmowgoB0635
CmoCh19G005460	Wax gourd	cmowgoB0642
CmoCh19G005460	Cucurbita moschata (Rifu)	cmocmoB110
CmoCh19G005460	Cucurbita moschata (Rifu)	cmocmoB395
CmoCh19G005460	Cucumber (Gy14) v1	cgycmoB0627
CmoCh19G005460	Cucurbita maxima (Rimu)	cmacmoB143
CmoCh19G005460	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G005460	Wild cucumber (PI 183967)	cmocpiB525
CmoCh19G005460	Cucumber (Chinese Long) v2	cmocuB519
CmoCh19G005460	Melon (DHL92) v3.5.1	cmomeB454
CmoCh19G005460	Melon (DHL92) v3.5.1	cmomeB475
CmoCh19G005460	Watermelon (Charleston Gray)	cmowcgB454
CmoCh19G005460	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G005460	Watermelon (97103) v1	cmowmB478
CmoCh19G005460	Watermelon (97103) v1	cmowmB496