CmoCh19G005410 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G005410
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cysteine-rich venom protein
Location	Cmo_Chr19 : 6275721 .. 6276194 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGACTATTCTTACACTCATTCTTCTTCTTTCGACCCTTTTAGTCAAATCATCAGATGCCCAGAATTCAGCTCAAGATTATATTAATAACCACAATTCAGCCAGATCATCTGTCGGCGTCGGAAATCTTGTATGGAACACAACTCTAGCTGCCTATGCTCAAACATACGCGAATTCGAGGAAAGGAGATTGCCAATTGGTGCATTCGAACGGGCCGTATGGCGAGAACCTTGCAAAGGGCAACAATGGATTCACTGGCACAGCTGCGGTGAAGCTATGGGTTGATGAAAAGCCTTACTATAGTTACAACACTAATGCATGTGCTGGAGGTGAGTGTCTTCATTACACGCAGGTTGTTTGGCAAAGCTCTTATCGTGTTGGGTGTGCGAGAGTTCAATGCAACAATGGCTGGTGGTTTGTGTCTTGCAATTATGATCCTCCAGGCAATTGGGATGGCGAGTGGCCTTATTAA

mRNA sequence

ATGATGACTATTCTTACACTCATTCTTCTTCTTTCGACCCTTTTAGTCAAATCATCAGATGCCCAGAATTCAGCTCAAGATTATATTAATAACCACAATTCAGCCAGATCATCTGTCGGCGTCGGAAATCTTGTATGGAACACAACTCTAGCTGCCTATGCTCAAACATACGCGAATTCGAGGAAAGGAGATTGCCAATTGGTGCATTCGAACGGGCCGTATGGCGAGAACCTTGCAAAGGGCAACAATGGATTCACTGGCACAGCTGCGGTGAAGCTATGGGTTGATGAAAAGCCTTACTATAGTTACAACACTAATGCATGTGCTGGAGGTGAGTGTCTTCATTACACGCAGGTTGTTTGGCAAAGCTCTTATCGTGTTGGGTGTGCGAGAGTTCAATGCAACAATGGCTGGTGGTTTGTGTCTTGCAATTATGATCCTCCAGGCAATTGGGATGGCGAGTGGCCTTATTAA

Coding sequence (CDS)

ATGATGACTATTCTTACACTCATTCTTCTTCTTTCGACCCTTTTAGTCAAATCATCAGATGCCCAGAATTCAGCTCAAGATTATATTAATAACCACAATTCAGCCAGATCATCTGTCGGCGTCGGAAATCTTGTATGGAACACAACTCTAGCTGCCTATGCTCAAACATACGCGAATTCGAGGAAAGGAGATTGCCAATTGGTGCATTCGAACGGGCCGTATGGCGAGAACCTTGCAAAGGGCAACAATGGATTCACTGGCACAGCTGCGGTGAAGCTATGGGTTGATGAAAAGCCTTACTATAGTTACAACACTAATGCATGTGCTGGAGGTGAGTGTCTTCATTACACGCAGGTTGTTTGGCAAAGCTCTTATCGTGTTGGGTGTGCGAGAGTTCAATGCAACAATGGCTGGTGGTTTGTGTCTTGCAATTATGATCCTCCAGGCAATTGGGATGGCGAGTGGCCTTATTAA

Homology

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BLAST of CmoCh19G005410 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.1e-51
Identity = 89/156 (57.05%), Postives = 115/156 (73.72%), Query Frame = 1


Query: 2   MTILTLILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSR 61
           +T +    +   +L+ SS AQNS QDY+N HN+AR  VGVG + W+  LAAYAQ YAN R
Sbjct: 4   LTTIVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQR 63

Query: 62  KGDCQLVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGGECLHYTQVVW 121
            GDC ++HS+GPYGENLA          AVK+WVDEK +Y YN+N+C GG C HYTQVVW
Sbjct: 64  IGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVW 123

Query: 122 QSSYRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           ++S R+GCARV+ NNGW+F++CNYDPPGN+ G+ P+
Sbjct: 124 RNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

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BLAST of CmoCh19G005410 vs. Swiss-Prot
Match: PR06_SOLLC (Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum GN=PR1B1 PE=1 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-49
Identity = 95/161 (59.01%), Postives = 116/161 (72.05%), Query Frame = 1


Query: 2   MTILTLILLLSTLLV----KSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTY 61
           M +  + LLL+ L+V     S +AQNS QDY+  HN AR+ VGVG + W+  LA+ AQ Y
Sbjct: 1   MGLFNISLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNY 60

Query: 62  ANSRKGDCQLVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGGE-CLHY 121
           ANSR GDC L+HS    GENLAKG   FTG AAV+LWV E+P Y+Y TN C GG+ C HY
Sbjct: 61  ANSRAGDCNLIHSGA--GENLAKGGGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHY 120

Query: 122 TQVVWQSSYRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           TQVVW++S R+GC R +CNNGWWF+SCNYDP GNW G+ PY
Sbjct: 121 TQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY 159

[Close]

BLAST of CmoCh19G005410 vs. Swiss-Prot
Match: PR04_SOLLC (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-49
Identity = 96/161 (59.63%), Postives = 116/161 (72.05%), Query Frame = 1


Query: 2   MTILTLILLLSTLLV----KSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTY 61
           M +  + LLL+ L+V     S +AQNS QDY+  HN AR+ VGVG + W+  LA+ AQ Y
Sbjct: 1   MGLFNISLLLTCLMVLAIFHSCEAQNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNY 60

Query: 62  ANSRKGDCQLVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGGE-CLHY 121
           ANSR GDC L+HS    GENLAKG   FTG AAV+LWV E+P Y+Y TN C GG+ C HY
Sbjct: 61  ANSRAGDCNLIHSGA--GENLAKGGGDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHY 120

Query: 122 TQVVWQSSYRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           TQVVW++S R+GC R +CNNGWWF+SCNYDP GNW GE PY
Sbjct: 121 TQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWVGERPY 159

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BLAST of CmoCh19G005410 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.6e-47
Identity = 90/154 (58.44%), Postives = 111/154 (72.08%), Query Frame = 1


Query: 4   ILTLILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKG 63
           IL ++  L   LV    AQ+S QDY+N HN ARS +GVG + W+  LAAYA+ YAN  KG
Sbjct: 9   ILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKG 68

Query: 64  DCQLVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGGECLHYTQVVWQS 123
           DC+LVHS GPYGENLAK     +G AAV LWV+EK  Y+Y+TN C  G C HYTQVVW++
Sbjct: 69  DCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRN 128

Query: 124 SYRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           S R+GCA+V+CNNG   +SCNYDPPGN+  + PY
Sbjct: 129 SVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmoCh19G005410 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-46
Identity = 92/156 (58.97%), Postives = 115/156 (73.72%), Query Frame = 1


Query: 4   ILTLILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKG 63
           +L   LLL  ++  S  AQNS QDY++ HN+AR+ VGV  L W+  +AAYAQ YA+    
Sbjct: 13  LLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 72

Query: 64  DCQLVHSNGPYGENLAKGNNGF-TGTAAVKLWVDEKPYYSYNTNACAGGE-CLHYTQVVW 123
           DC LVHS+G YGENLA+G+  F T   AV++WVDEK YY +++N CA G+ C HYTQVVW
Sbjct: 73  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

Query: 124 QSSYRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           ++S RVGCARVQCNNG + VSCNYDPPGN+ GE PY
Sbjct: 133 RNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

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BLAST of CmoCh19G005410 vs. TrEMBL
Match: A0A0A0K2D0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070252 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 7.8e-73
Identity = 128/158 (81.01%), Postives = 142/158 (89.87%), Query Frame = 1


Query: 1   MMTILTLILLLSTLLV-KSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYAN 60
           +M++  L LL   +LV K  +AQNSAQDYIN HNSARS+VGVGN+VWNTTLAAYAQTYAN
Sbjct: 6   LMSVFQLFLLAVVVLVLKRCEAQNSAQDYINGHNSARSTVGVGNIVWNTTLAAYAQTYAN 65

Query: 61  SRKGDCQLVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGGECLHYTQV 120
           SRK DCQL+HSNGPYGEN+AKGNNGF+G AAVKLWVDEKPYYSY+ NAC GGECLHYTQV
Sbjct: 66  SRKSDCQLIHSNGPYGENIAKGNNGFSGAAAVKLWVDEKPYYSYSKNACDGGECLHYTQV 125

Query: 121 VWQSSYRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           VW++SYRVGCARVQCNNGWWF+SCNYDPPGNWD E PY
Sbjct: 126 VWETSYRVGCARVQCNNGWWFISCNYDPPGNWDEERPY 163

[Close]

BLAST of CmoCh19G005410 vs. TrEMBL
Match: B9HN40_POPTR (Pathogenesis-related family protein OS=Populus trichocarpa GN=POPTR_0009s08700g PE=3 SV=2)

HSP 1 Score: 235.7 bits (600), Expect = 3.8e-59
Identity = 106/151 (70.20%), Postives = 122/151 (80.79%), Query Frame = 1


Query: 7   LILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKGDCQ 66
           L+ L+S  L   S AQNS QDY+N HN+ARS V V N++W+ T+AAYA  YANSR  DC 
Sbjct: 10  LVYLVSLALAHPSHAQNSQQDYLNAHNAARSQVTVANIIWDNTVAAYALNYANSRISDCN 69

Query: 67  LVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGGECLHYTQVVWQSSYR 126
           LVHSNGPYGENLAKG+  FTGTAAV LWV EKPYY Y +N+C GG+CLHYTQVVW++S R
Sbjct: 70  LVHSNGPYGENLAKGSGSFTGTAAVNLWVAEKPYYDYASNSCVGGQCLHYTQVVWRNSVR 129

Query: 127 VGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           VGCARV+C NGWWFVSCNYDPPGN+ GE PY
Sbjct: 130 VGCARVKCTNGWWFVSCNYDPPGNYIGERPY 160

[Close]

BLAST of CmoCh19G005410 vs. TrEMBL
Match: V4KGY0_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011955mg PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.1e-57
Identity = 105/161 (65.22%), Postives = 134/161 (83.23%), Query Frame = 1


Query: 1   MMTILTLILLL--STLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYA 60
           M T  TL+LL+  ++ LV +S+AQN+AQDY+N HN+ARS VGV N+VW+ T+A YAQ YA
Sbjct: 1   MNTFKTLVLLIIAASFLVIASNAQNTAQDYLNTHNTARSQVGVANVVWDATVATYAQNYA 60

Query: 61  NSRKGDCQLVHSNGPYGENLAKGNNG-FTGTAAVKLWVDEKPYYSYNTNACAGG-ECLHY 120
           N+RK DC LVHS+GPYGENLAKG++  F+G +AV LW++EKPYY+Y TN+C GG +CLHY
Sbjct: 61  NARKSDCNLVHSSGPYGENLAKGSSSTFSGISAVNLWINEKPYYNYTTNSCTGGKQCLHY 120

Query: 121 TQVVWQSSYRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           TQVVW+ S ++GCARVQC NGWWFV+CNYD PGN+ GE+PY
Sbjct: 121 TQVVWRDSVKIGCARVQCTNGWWFVTCNYDAPGNYIGEYPY 161

[Close]

BLAST of CmoCh19G005410 vs. TrEMBL
Match: F6HBN8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00700 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 4.6e-57
Identity = 102/151 (67.55%), Postives = 118/151 (78.15%), Query Frame = 1


Query: 7   LILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKGDCQ 66
           L+ L+   L     AQNS QDY+N HN+AR+ VGVG++ WN T+AAYAQ YAN R  DC 
Sbjct: 11  LVGLMGLALAHVCCAQNSPQDYVNAHNAARAQVGVGSMTWNDTVAAYAQNYANKRISDCN 70

Query: 67  LVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGGECLHYTQVVWQSSYR 126
           LVHS GPYGENLAKG+   TGT AV LWV EKP Y YN+N+C GGECLHYTQVVW +S R
Sbjct: 71  LVHSGGPYGENLAKGSGSLTGTDAVNLWVGEKPNYDYNSNSCVGGECLHYTQVVWSNSVR 130

Query: 127 VGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           +GCARVQCNNGWWFV+CNYDPPGN+ G+ PY
Sbjct: 131 LGCARVQCNNGWWFVTCNYDPPGNYVGQRPY 161

[Close]

BLAST of CmoCh19G005410 vs. TrEMBL
Match: E2GEW7_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 6.0e-57
Identity = 102/151 (67.55%), Postives = 118/151 (78.15%), Query Frame = 1


Query: 7   LILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKGDCQ 66
           L+ L+   L     AQNS QDY+N HN+AR+ VGVG++ WN T+AAYAQ YAN R  DC 
Sbjct: 11  LVGLVGLALAHVCCAQNSPQDYVNAHNAARAQVGVGSMTWNDTVAAYAQNYANKRISDCN 70

Query: 67  LVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGGECLHYTQVVWQSSYR 126
           LVHS GPYGENLAKG+   TGT AV LWV EKP Y YN+N+C GGECLHYTQVVW +S R
Sbjct: 71  LVHSGGPYGENLAKGSGSLTGTDAVNLWVGEKPNYDYNSNSCVGGECLHYTQVVWSNSVR 130

Query: 127 VGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           +GCARVQCNNGWWFV+CNYDPPGN+ G+ PY
Sbjct: 131 LGCARVQCNNGWWFVTCNYDPPGNYVGQRPY 161

[Close]

BLAST of CmoCh19G005410 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 224.2 bits (570), Expect = 5.7e-59
Identity = 101/153 (66.01%), Postives = 126/153 (82.35%), Query Frame = 1


Query: 7   LILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKGDCQ 66
           L+++  + LV +++AQN+ QDY+N+HN+AR+ VGV N+VW+TTLAAYA  Y+N RK DC 
Sbjct: 9   LVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCN 68

Query: 67  LVHSNGPYGENLAKG-NNGFTGTAAVKLWVDEKPYYSYNTNACAGG-ECLHYTQVVWQSS 126
           LVHSNGPYGENLAKG ++ F+  +AVKLWVDEKPYYSY  N C GG +CLHYTQVVW+ S
Sbjct: 69  LVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDS 128

Query: 127 YRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
            ++GCARVQC N WWFVSCNY+ PGNW GE+PY
Sbjct: 129 VKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmoCh19G005410 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 189.1 bits (479), Expect = 2.0e-48
Identity = 90/154 (58.44%), Postives = 111/154 (72.08%), Query Frame = 1


Query: 4   ILTLILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKG 63
           IL ++  L   LV    AQ+S QDY+N HN ARS +GVG + W+  LAAYA+ YAN  KG
Sbjct: 9   ILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKG 68

Query: 64  DCQLVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGGECLHYTQVVWQS 123
           DC+LVHS GPYGENLAK     +G AAV LWV+EK  Y+Y+TN C  G C HYTQVVW++
Sbjct: 69  DCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRN 128

Query: 124 SYRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           S R+GCA+V+CNNG   +SCNYDPPGN+  + PY
Sbjct: 129 SVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]

BLAST of CmoCh19G005410 vs. TAIR10
Match: AT1G50050.1 (AT1G50050.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 184.5 bits (467), Expect = 5.0e-47
Identity = 88/143 (61.54%), Postives = 109/143 (76.22%), Query Frame = 1


Query: 7   LILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKGDCQ 66
           LI++  + LV +++AQN+ QDY+N HN+AR+ VGV N+VW+T +AAYA  YAN+RK DC 
Sbjct: 9   LIIVAISFLVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCS 68

Query: 67  LVHS-NGPYGENLAKGNNG-FTGTAAVKLWVDEKPYYSYNTNACAGG-ECLHYTQVVWQS 126
           L  S  G YGENLA GNN  FTG AAV LWV+EKPYY+Y  NAC G  +C HYTQVVW +
Sbjct: 69  LTPSTGGSYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQVVWSN 128

Query: 127 SYRVGCARVQCNNGWWFVSCNYD 147
           S ++GCARV CNNG +FV CNYD
Sbjct: 129 SVKIGCARVLCNNGGYFVGCNYD 151

[Close]

BLAST of CmoCh19G005410 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-46
Identity = 85/154 (55.19%), Postives = 111/154 (72.08%), Query Frame = 1


Query: 5   LTLILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKGD 64
           L L +    +L+    AQ+S QD++  HN AR+ VGVG L W+  +AAYA+ YAN RKGD
Sbjct: 10  LFLAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGD 69

Query: 65  CQLVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACA-GGECLHYTQVVWQS 124
           C + HS+G YGEN+A  +   TG AAV +WVDE+  Y Y++N CA   +C HYTQVVW++
Sbjct: 70  CAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRN 129

Query: 125 SYRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           S R+GCA+V+CNNG  F++CNYDPPGNW GEWPY
Sbjct: 130 SERLGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmoCh19G005410 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 171.0 bits (432), Expect = 5.8e-43
Identity = 81/153 (52.94%), Postives = 106/153 (69.28%), Query Frame = 1


Query: 5   LTLILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKGD 64
           L + + L   LV  S AQ+S QDY+  HN AR +VGVG + W+  +AAYA++YA   +G+
Sbjct: 10  LIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGN 69

Query: 65  CQLVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGGECLHYTQVVWQSS 124
           C+L+HS GPYGENLA G+   +G +AV +WV EK  Y+Y  N C  G C HYTQVVW+ S
Sbjct: 70  CRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRKS 129

Query: 125 YRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
            R+GCA+V+CNNG   +SCNYDP GN+  E PY
Sbjct: 130 VRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh19G005410 vs. NCBI nr
Match: gi|659110131|ref|XP_008455065.1| (PREDICTED: pathogenesis-related leaf protein 6-like [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 1.3e-73
Identity = 124/150 (82.67%), Postives = 138/150 (92.00%), Query Frame = 1


Query: 8   ILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKGDCQL 67
           +L +  L ++  +AQNSAQDYIN HNSARS+V VGN+VWN TLAAYAQTYANSRKGDCQL
Sbjct: 14  LLAVVVLTLRCCEAQNSAQDYINGHNSARSTVKVGNIVWNATLAAYAQTYANSRKGDCQL 73

Query: 68  VHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGGECLHYTQVVWQSSYRV 127
           +HSNGPYGENLAKGNNGF+G AAVKLWVDEKPYYSY+ NAC GGECLHYTQVVW++SYRV
Sbjct: 74  IHSNGPYGENLAKGNNGFSGAAAVKLWVDEKPYYSYSNNACNGGECLHYTQVVWKTSYRV 133

Query: 128 GCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           GCARVQCN+GWWF+SCNYDPPGNWDGEWPY
Sbjct: 134 GCARVQCNDGWWFISCNYDPPGNWDGEWPY 163

[Close]

BLAST of CmoCh19G005410 vs. NCBI nr
Match: gi|778724764|ref|XP_004136923.2| (PREDICTED: pathogenesis-related leaf protein 6-like [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 1.1e-72
Identity = 128/158 (81.01%), Postives = 142/158 (89.87%), Query Frame = 1


Query: 1   MMTILTLILLLSTLLV-KSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYAN 60
           +M++  L LL   +LV K  +AQNSAQDYIN HNSARS+VGVGN+VWNTTLAAYAQTYAN
Sbjct: 6   LMSVFQLFLLAVVVLVLKRCEAQNSAQDYINGHNSARSTVGVGNIVWNTTLAAYAQTYAN 65

Query: 61  SRKGDCQLVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGGECLHYTQV 120
           SRK DCQL+HSNGPYGEN+AKGNNGF+G AAVKLWVDEKPYYSY+ NAC GGECLHYTQV
Sbjct: 66  SRKSDCQLIHSNGPYGENIAKGNNGFSGAAAVKLWVDEKPYYSYSKNACDGGECLHYTQV 125

Query: 121 VWQSSYRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
           VW++SYRVGCARVQCNNGWWF+SCNYDPPGNWD E PY
Sbjct: 126 VWETSYRVGCARVQCNNGWWFISCNYDPPGNWDEERPY 163

[Close]

BLAST of CmoCh19G005410 vs. NCBI nr
Match: gi|727610581|ref|XP_010478439.1| (PREDICTED: pathogenesis-related leaf protein 6-like [Camelina sativa])

HSP 1 Score: 238.4 bits (607), Expect = 8.3e-60
Identity = 105/153 (68.63%), Postives = 127/153 (83.01%), Query Frame = 1


Query: 6   TLILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKGDC 65
           +L+++  + LV +++AQNS QDY+  HN+AR+ VGV NLVW+TT+A YA  YAN+RK +C
Sbjct: 8   SLLIVAISFLVIATNAQNSQQDYLTAHNNARTQVGVANLVWDTTVATYALNYANTRKANC 67

Query: 66  QLVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGG-ECLHYTQVVWQSS 125
            L+HSNGPYGENLAKG+  FT  AAVKLWVDEKPYYSY TNAC GG +CLHYTQVVW+ S
Sbjct: 68  SLIHSNGPYGENLAKGSGNFTAIAAVKLWVDEKPYYSYTTNACTGGQQCLHYTQVVWRES 127

Query: 126 YRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
            ++GCARVQC NGWWFVSCNYD PGNW GE+PY
Sbjct: 128 VKIGCARVQCTNGWWFVSCNYDAPGNWIGEYPY 160

[Close]

BLAST of CmoCh19G005410 vs. NCBI nr
Match: gi|727438432|ref|XP_010500562.1| (PREDICTED: pathogenesis-related leaf protein 6-like [Camelina sativa])

HSP 1 Score: 238.4 bits (607), Expect = 8.3e-60
Identity = 105/153 (68.63%), Postives = 127/153 (83.01%), Query Frame = 1


Query: 6   TLILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKGDC 65
           +L+++  + LV +++AQNS QDY+  HN+AR+ VGV NLVW+TT+A YA  YAN+RK +C
Sbjct: 8   SLLIVAISFLVIATNAQNSQQDYLTAHNNARAQVGVANLVWDTTVATYALNYANTRKANC 67

Query: 66  QLVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGG-ECLHYTQVVWQSS 125
            L+HSNGPYGENLAKG+  FT  AAVKLWVDEKPYYSY TNAC GG +CLHYTQVVW+ S
Sbjct: 68  SLIHSNGPYGENLAKGSGNFTAIAAVKLWVDEKPYYSYTTNACTGGQQCLHYTQVVWRES 127

Query: 126 YRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
            ++GCARVQC NGWWFVSCNYD PGNW GE+PY
Sbjct: 128 VKIGCARVQCTNGWWFVSCNYDAPGNWIGEYPY 160

[Close]

BLAST of CmoCh19G005410 vs. NCBI nr
Match: gi|727578372|ref|XP_010461858.1| (PREDICTED: pathogenesis-related leaf protein 6-like [Camelina sativa])

HSP 1 Score: 237.7 bits (605), Expect = 1.4e-59
Identity = 105/153 (68.63%), Postives = 126/153 (82.35%), Query Frame = 1


Query: 6   TLILLLSTLLVKSSDAQNSAQDYINNHNSARSSVGVGNLVWNTTLAAYAQTYANSRKGDC 65
           +L+++  + LV ++ AQNS QDY+  HN+AR+ VGV NLVW+TT+A YA  YAN+RK +C
Sbjct: 8   SLLIVAISFLVIATTAQNSQQDYLTAHNNARAQVGVANLVWDTTVATYALNYANTRKANC 67

Query: 66  QLVHSNGPYGENLAKGNNGFTGTAAVKLWVDEKPYYSYNTNACAGG-ECLHYTQVVWQSS 125
            L+HSNGPYGENLAKG+  FT  AAVKLWVDEKPYYSY TNAC GG +CLHYTQVVW+ S
Sbjct: 68  SLIHSNGPYGENLAKGSGNFTAIAAVKLWVDEKPYYSYTTNACTGGQQCLHYTQVVWRES 127

Query: 126 YRVGCARVQCNNGWWFVSCNYDPPGNWDGEWPY 158
            ++GCARVQC NGWWFVSCNYD PGNW GE+PY
Sbjct: 128 VKIGCARVQCTNGWWFVSCNYDAPGNWIGEYPY 160

The following BLAST results are available for this feature:

BLAST of CmoCh19G005410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	7.1e-51	57.05	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR06_SOLLC	1.3e-49	59.01	Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum GN=PR1B1 PE=1 SV=2	[more]
PR04_SOLLC	1.3e-49	59.63	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1	[more]
PRB1_ARATH	3.6e-47	58.44	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR1A_TOBAC	1.1e-46	58.97	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]

BLAST of CmoCh19G005410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2D0_CUCSA	7.8e-73	81.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070252 PE=3 SV=1	[more]
B9HN40_POPTR	3.8e-59	70.20	Pathogenesis-related family protein OS=Populus trichocarpa GN=POPTR_0009s08700g ...	[more]
V4KGY0_EUTSA	2.1e-57	65.22	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10011955mg PE=3 SV=1	[more]
F6HBN8_VITVI	4.6e-57	67.55	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00700 PE=3 SV=...	[more]
E2GEW7_9ROSI	6.0e-57	67.55	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]

BLAST of CmoCh19G005410 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50060.1	5.7e-59	66.01	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14580.1	2.0e-48	58.44	basic pathogenesis-related protein 1	[more]
AT1G50050.1	5.0e-47	61.54	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT4G33720.1	1.1e-46	55.19	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	5.8e-43	52.94	pathogenesis-related gene 1	[more]

BLAST of CmoCh19G005410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110131\|ref\|XP_008455065.1\|	1.3e-73	82.67	PREDICTED: pathogenesis-related leaf protein 6-like [Cucumis melo]	[more]
gi\|778724764\|ref\|XP_004136923.2\|	1.1e-72	81.01	PREDICTED: pathogenesis-related leaf protein 6-like [Cucumis sativus]	[more]
gi\|727610581\|ref\|XP_010478439.1\|	8.3e-60	68.63	PREDICTED: pathogenesis-related leaf protein 6-like [Camelina sativa]	[more]
gi\|727438432\|ref\|XP_010500562.1\|	8.3e-60	68.63	PREDICTED: pathogenesis-related leaf protein 6-like [Camelina sativa]	[more]
gi\|727578372\|ref\|XP_010461858.1\|	1.4e-59	68.63	PREDICTED: pathogenesis-related leaf protein 6-like [Camelina sativa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G005410.1	CmoCh19G005410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 140..153 score: 2.9E-18coord: 113..129 score: 2.9E-18coord: 90..103 score: 2.9E-18coord: 44..62 score: 2.9
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 2..157 score: 1.1
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 23..157 score: 1.0
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 30..145 score: 1.5
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 23..153 score: 2.5
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 2..157 score: 4.19
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 140..151 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 2..157 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G005410	CSPI07G06640	Wild cucumber (PI 183967)	cmocpiB525
CmoCh19G005410	Lsi03G006180	Bottle gourd (USVL1VR-Ls)	cmolsiB468
CmoCh19G005410	MELO3C018034.2	Melon (DHL92) v3.6.1	cmomedB550

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G005410	Cucumber (Gy14) v2	cgybcmoB928
CmoCh19G005410	Melon (DHL92) v3.6.1	cmomedB523
CmoCh19G005410	Silver-seed gourd	carcmoB0615
CmoCh19G005410	Silver-seed gourd	carcmoB0998
CmoCh19G005410	Cucumber (Chinese Long) v3	cmocucB0623
CmoCh19G005410	Watermelon (97103) v2	cmowmbB505
CmoCh19G005410	Watermelon (97103) v2	cmowmbB512
CmoCh19G005410	Wax gourd	cmowgoB0635
CmoCh19G005410	Wax gourd	cmowgoB0642
CmoCh19G005410	Cucurbita moschata (Rifu)	cmocmoB110
CmoCh19G005410	Cucurbita moschata (Rifu)	cmocmoB395
CmoCh19G005410	Cucumber (Gy14) v1	cgycmoB0627
CmoCh19G005410	Cucurbita maxima (Rimu)	cmacmoB143
CmoCh19G005410	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G005410	Cucumber (Chinese Long) v2	cmocuB519
CmoCh19G005410	Melon (DHL92) v3.5.1	cmomeB454
CmoCh19G005410	Melon (DHL92) v3.5.1	cmomeB475
CmoCh19G005410	Watermelon (Charleston Gray)	cmowcgB454
CmoCh19G005410	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G005410	Watermelon (97103) v1	cmowmB478
CmoCh19G005410	Watermelon (97103) v1	cmowmB496
CmoCh19G005410	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G005410	Cucurbita pepo (Zucchini)	cmocpeB494
CmoCh19G005410	Bottle gourd (USVL1VR-Ls)	cmolsiB467