CmoCh19G004920 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G004920
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMADS-box transcription factor protein 1
LocationCmo_Chr19 : 5857286 .. 5877665 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCTTTCTCTCTCTTCAACCCATTGGAGGGTTCTCCGAATAATGGTATCTTGTCTGCAACCCCTTCTCTTCAAGCTGTGTCAGTAATTAACCCCAAAAGCTACCAACGCCATTACCTCAAATTTAACCCAAAAATAAAATAAAATCAAATCAAATCAACACCTTCTTCTCTTGTTTTTCCTCGAAGAATCAAATTTTGGCATCAAATCTGAGGTGGGTTTTTGTTTTTGAGCTTCAATTTCTCTCTCTAGAATGATTTTGATCCATTTTTGTAAGAAAAATTTCATCTTTTTTTTGTTTCTTGATAGAAATCTAGCATCAAATCTGAGGTGGGTTTTTGTTTTCAGCTTCAATTTCTCTCTCTAGAGGGAATTTGATCCATTTTTGTAAGAAAAATTTCATCTTTTTTGTTTCTTGATGACAAATTTTGCATCAAATCTGAAGTGGGTTTTTGTTTTTGAGGCTCAATTTCTCTCTCTTGAATGATTTTGATCCATTTTTGTAAGAAAAATCCCATCTTTTTTTGTTTCTTGATAGAAATCTTTGTAGAAACCATTGTTTTCATCAAAGATCAAAGCTTTTTTGTTTTGATTTTTCAGGAAAAGGAATTGAAAGATGACGAGGAAGAAAATTCAGATCAAGAAGATCGACAACATAGCAGCAAGACAAGTAGCATTTTCAAAGAGGAGAAAAGGGCTTTTCAAGAAGGCGAAAGAACTTGCAATTCTTTGTGATGCTGAAATTGGCCTTCTTGTTTTTTCTGCTTCTGGCAAGCTCTTTGACTACGCAAGTTCAAGGTTTCTTCTTCTTACCCTTTTTTTTCTTCTAGAGAGAGAAAGAGAGGAGAGAGAAAACAAATTTGCACTTTTTAAGCTATTAAATAATAGTAAAGAAACCATAAACATGTGGGGTATGTGAATTTGGTGATGAACTCGATCTAAAATCAAGGCTAGGTGAAATTTGAAAGCCCTTCTGCTCATTCTTAACACCTTCTGGTAGAGATCTTCCCCCTCATAAAATATAGGGTAGATTTGATATTTGAGGTGAAATTCATGAAAGTTTTGCATGAGATTTGAGGGAATTTGCAAGTTTTGAGAGATGGGTTTGGTCTAAATTTGAATTTAGATAATGGGTTTTGTTAGAACATAGAAAATTTGTTCATATGCTCATATTATGTTCATATCATGTTCATATCATGTTCATGTTCATATTAAGCATTGTTTTCTTTGTTATGCATCAATTTTGTGATTGTTTTCATTCAATTTCTGATATATATGATTCTCTAAACCTTGTTTCTACTCTCAATTAGCTGTTTTTTCCATTCAATATGAGAATAGAAACGAAAAAAAGAACAGAAAAACACATAAACATGTAAGCTTCAAGCATAAGATTTAGTTTGTAGTCCTTTTTCATAACAAATTACAGCATTTAGGCCCCAAAAAATGGCATTTTTCATCATGGGTTCTCTTGTTTTCTCTTAAATTTTGGATTTTAGAGAAGGATATTGCTTAAATCTTCATTGTTCTTAGTAAATAAAACATGAAATATACAGAATCTCCCTTGAAAAATTATACTCAAACAGTGAAAGAGATTGAAAATTGTTCTCTCTCTCTCTCTCTCTCTCTAAACTCCAATAACTTTTTCTCTCTCCATAAAGTACTCACTATATTTTCTTTTTAAATAATCTTCATATGCATAAGCTTCAAAGATTTTTGAAATTGTAACAAAGGACAGACAAGCATGTTTTGAAAGAATAACGTTGTTATATACTAAAAACATGTTGAAAGAAAAGAATAATGTCTTAAGATCTTAAGATCTTAAGAACATTATAATTATCTTTGTCAAATATGAAGACAATGTAGTTATTAGGGTTTTGTTCGATAGTACTTTTGTTTATGTTTTTTGTCCTCCCTATCCTATGATGTTCTTTCATCTAAACCTAACCCTACATGTCAATGTTTGGTCCTTCAATAGTGGAAAGCTATGAAATCTCAACTTATGTGTATAAGATTTGCATCTAAGAACATGTTTGGACACAAGTTTTGCCCTTTGTAGGTCAAAAAGTTTGGTTGGGAAGGAACCCCACTAGTCCTTTTTTCTATAAAGATGGTTTCGTGTAGATCTCGGTTAGAATTTTAGAGGGTTGGCAAAGTTTTTCTTGGAAATGGGAAGGTTTAAAGCGTTTTTATGAGCGTTTGTTCATTAGAGTTTTCTCAATTTTCATGTTGGCGTAGTGTTTTTTTAGATTTGAATCCGTTCTTTTAGTTTTCAATGTTGTATAATCTTTCGTTTTTTGTTAATTTCTTGTTTAGGACCTACTACCCTAAACTCTTTAGAGTCCCTAGTTTCCACCCCTAACTAAACCATTATCCGTTTCACCTACCTTGTCTTCGTCGTTCGCTATGAATTGGGGTTCAATCATTATGTTCGAGATCTTCTATATCTTATTTCACTTGATTAGAGCCTCTTCTTATTATCCGACCCCTTGTGAAAGTTATGTTTAGATGATCTTGTATTCTTTCATTTTTTCTCATCCAAAGTTCGACATTAGCATACGTAAAACGAATGAGAAAAACATTACATGAAGATTGGTACAAAACATTAAGAGTTTCACAAAACAACAATAAGATTGGACCTAAACCCTATGACTCAATTAGCATTCGCCTAATACGTCCTTACTATGCTAAGTTATAAAAAAATCAGTTAGTAATCCCTCTAATAGAGTCAGACCTGCATGCACACGTGACTTATGTCGACAATTAGTCCATTGGATTGAGCTAGGTCGATTATCTTGTGGTGCATAAGTAAGAGTTTTGGGACACTGTGCCCCAACCGATGAGAATTGACACCTAGTTAGTAGAATGAGAATTGACACCTAGTTAGTAGAGCCGAGACTCACTCATCGTATCGTCTCACGATAATAGATGGGTGCTTGTCATGATATAACAAATGCATGCACAAACATCAAAATTATCACTATTACGACGCGCACTACACTTCATGACCTAAGACCATCCATTAAGAGAGCCTACCTGAATCCAGAAACCCAAAACGTGGTTTTTCCCACAATGCACAATCAACAGCACTGGTAACTGGGCGTGCAACGGTGGTGGTGGTGGTGGGGTGCTGCCTGGTGGACCTAAAACGAGAGAGAGAGGGGGAGAGAGAGAGAGAGAGGCGGAGAGAAACTTACTAAAGACAATCAACATGGGCGGCGGTGCAGCTAGACGTCGGAGAAGGCAGGAGGAGGGCGTCGCAAGGGGTGATCAGAGGGAGAGAAAGATGAGCGAGATAAGAGTGAGGGAGAGAAAGGTGACAAAAAAAAAAAAAAGAATTTACTATATATATTTTAACCTAACCCTAGTTAACTTTACCTTGGTCAACCCTCCAATTTAACCATTAAAACTAGGATGTTTAGAAGACTCGATCACTTAAAGAACCTGATTAACCTGATCCAATTGTTTGTATTGAATTATCAATTTATTTGAGTTGGGTTCGATACAAAAAGAAATTTATGAGTTGAATTGAGTTAGGGACGAAACTCATCAAATTTTTTTGCTTATAATATATTTATATATACTTTAATTTATTATAATTTTTTCCTTCTAATAACTATTTATTATTATTATTTATTCTTTTAACTATTGGTAAAAATTCAAACTTTAAATCATAAATTTTAATTAAATATTCGAAATTTTTTAAGAATTTTATTAAAAACAAAAAATTGAATTAATGATTTGATCAAACGTGAATATTTTAGGGTTGAGTTAGATTAAGTCGATTATTTAATAAAGGTTACTTGTTTTTGAGTCAAGAAAAGGTTTAAACTCGACCTAACCCAATTCATTAACGTTCTTAATTAAAATTCAGTTATTTGTACATTCTTAATTTGACAATTTTAACCCTCGACCAACTTAATTGAAAATTTATACTTGAATTGAGAATTTAATTTAAAAAATAAATGAAAATAAAGTTGAACAATTGAGAGCAAAAGTATAAATTTCCCTAATTGGAGCTTGAGACGTTACAATCTCCCTTCCTTAAGAAATTCCGTCCTTAAAAGTTCCTAATCCTTAAAATGTTATGTATATTTGGTCCTTGTTCATCTTCTCATTTTCAAGTCGCTTAAACTTTATGACATGAAATGGATTTGTCATGTACTTCCATAGCACAAGAACACGAAAAACATTATGAACTACACAGAGATAGTGGCAAAACCAAACGGTAAGCTACTACATCAACCCACTCAAGAATCTTAAACGGTCTAGAAAATGTTGCTCAACTTCCTCTTTCCTTTAAACCTCGGAACCCTTTCATAGATGTTACTTTAAGACTTAACTCTTCTGTCTACTCGGTGCTATTTGCATCTTCAATTCTAATATTTTAGATGACCTTATTGAACTTAGATTAACTTAGGGCCCAACTACTCGAGATCTCCTACCTTGTCCCAGTGAGGAATTACACAGTTTCTTAGATAGGGCTTCAAATGGAGCGATGTCAAGTGTTGCCTAATAGTTGTTATGTGAGGATTTCGTAAGTGCACATGAGAGTCCTAACTACTAACGAAACTCAACTTACAAGTGGATAACATGTCTTCTAAAGTTTGATTCAACCACGCAAGTAAATGCTATCAACTTTTAACCCTAGCTACAACTCCAAGAAATATTAATCTTTGTTTGGATTAGAAAATAAAATTTTAAACCTAATTAAATTAATTTACTCAAAACACCGACCACTGACCACATGTGAGTTAATAAGCTTAATTTGTACATGATTTAGTCTTTGCACACGATTTATTAATCGTGGATTATTATAAGTGGAATAATCTTGGTACATTTACCGTAGAAGTTATTAGGGTTAGGTTAAAAGTTCTCAAGTGAGAATACTTGAGTTTTTTTCCTGTCCATATTTCTTCTGACAATTTGAACTCTAAGGGTACTGACAACCCTTTATTAATCAAGTAGACTGCTGTATTTATAACATCGGCCTAGAATGTCTTTGGTAATTCAGAATGAATCCTCGTACTTCTTGCCCACTCATTCAATGTTCTGTTCATCCTTTCAGCAACATCATTTTGTCTTATTTTATCGAAAACTGTCCTCGTTAAACTGATTCCCTCAGCTGCACAAAATGTTTTGAATTCTGACTTGTCGTACTCTTTTTCATTGTTAAACCTTAGGCATTTGATCTTCAAGCCGGTTTGATTTTCAACTTCAGCTTTCCACTTCTTGAAGATGCAAAACATATCTGACTTGTGTTTTAGGAAATGAATTCACACCTAAATCATCGATGAAGGTCACGTAGAACTTTGATCCGCCAAGTGATGGAACTGGAGATGGTCCCCAAACGTCTGTATGGACTATTTCCAACTGCACTTTCTTCAATTCTCTAGCAGCCTTTATGAAGCTAACTCGTTTCTGTTTGCTCATAACACACCTCTCACAAGGACCTATATCAACAAATTTCAAATTTTCTAAAACTTCTTTTGCATCCAACATCTTCGTTTCTTTGACGCTCATATGTCCAAGTCTATTGTGCAATAGACTTGAATTTGAAACACATTAAGCAATATCATCCATGTTAATAGACCCTACTGTGGTGTATAAGGTTCCAGATTCTGTGTGACGTGCTACCAATCTTCCATGAACTCTTCCCAAATTATGTTGCGTGCTATCTAACTGACCAATAGAGATCAAGTTCTTCTTGAGACCAAGAATATATCTGACATCCCCTTTCCTTCAATCTCCAAGGCTTTGTTTTTGATATGATACTCATTCTCGAATTTTTTAGACTTGAAATTTTGGAACAACTCTTGATTTGGAGACGAATGAAAAGATGCACCTGAATCCAAAATTTAGGATTCAATCGAACTTTCCACACTGAAGATTAGAGCATCCCCAATGTCTTATGCTGAATTTATAGAATCATCCTCATCCTCTGATTTGTGATTCTGCTTTCTCTTCAGTCTTGTACAATCTGTCTGAAAGTGGCATTTTTCTCCATAACTCCAACACGTTAGGTTTGTTGTACAATCAGTCTTCTACAATTGGTTCTTTGATTTTGATCAACCTTTGTTTGACCCTTCGATTTACATCTTTCCCTTTAGTTTCTCCATATGAATCTCCAGTTTCTCGTTTGGAAATTCTTTCACTGAGAACTACATCTCAGATTTCATCGAACTTTAGTTTCTCAGATTTTGGGAATTGTTGATCGTGACAACAATAGTATCCCACGATTCGGGTAAAGATGACATCAAATTCAATGTCTTAATTTCATCTTCGAAATTAATGTCCACCGAGCTCAGTTGACTTACAATCATATTGAACTCAATTATATGATCCACAACAGGACTCCGTGGACATGATATCCAGCTTCACCCCAATAGAGATTTGTGAAGATCTTTCTGGTACAGATAATCTTCAATCTACATTTTCCAGAAACTGAATCGGATCCATCAAACTTCTCAATTCTAATATTTGAACTTTCCATTTTCACATATCGTGGTGAATTTCGCCTAGTTCTAATATTAGTTAGGATCGCACAACAACGCACACACTCGATCTAGATGAACATAAAGATCAGGAGGATACAGAGAAAGTAGAAAGTACATATTCAAAGTACCACCGGAAGGGTATATATATGTTTTCATTTTAGTGTATATATATATAGCTTTAACCCATATAACCCTCTATGTAAATATCTCCCATAAATCTCTACCACTTTTTTTTACTATAAATAGTCATTTACTATATATCCCATGATACCTATCCCAACCAAACAACACCACTTACCTTATACCATTCACTAAATTTAATGGTATGCGGACGATTATGGAAGAAACTCAAGGACTCCGTTGTTACCCTCTTGCACATAGTTAGACCTACTCACTCAGAATCAACCTTTCTGAAGAACTCCTTTTCTTTTTAACAAGCGCAACGTGTGGCAACAGGCAGGCAGGCAGGCAGGCGCTGCGAAGATGAGAAAGTCCAAGCCATGATGCAACAACCTGCTGTCTCATTTTCTTGAGGTGACTAGGGTTAAGCTTGTCCCTTGTCTTGACACCCCTTTCTTCCAACCAAGTCTATGTCTGCAGAAGCTGTGTTCCTGAATCTTTACTGCCATGACTATCCTTTACAAAGCTTGCACCGATGCCTCCACCAAAACCCCTCAGCTCCGTTCATGTCGGTGCTCGGTGTCACAACCTTACTATGAAGAGAGTAGGTTGTGACCCTCACGCCATGACAAGCAAAGGGGCGTCCCTCAAGAGACGCCCATCCGGCCATATGCGGGCCAACGTAGAAGAATGCCATTATGCGATCGAGGAGGACGATGCATCATCCAACACACCACCACGTAAAGTGGGCATTGAAGACATGTTGAGACACAAGCATAACAGAGACATCAGCATAGACATGAAGGACAAGATAGGCTTGTTGAAGGGCCGGGTAGGGCCCCGGGCCTTAACCTCAAAAGTCGAGGTTTCGGAAGGAATTTGGGCATGCGGTTCGGGAGTTAAGTCCGTCCATATGAAATATGAATGCTCGCCAAGTTTGGTGTCAATCGGACATGGGACGGACAATGCACGACACCGTATGACACCTCACGAAAATCATGTCTACTCCTGGTAGAATGAAAATGGCTCAAAATGTACTATAGGGGTACCATGGTGTTAGCTCTCCACCACCCCTGGGCCCTGTGGCCTAAGTGAGCTACCCTGTGGCACATACGTGTGTCACAGTGTGGGCGAGCGTGCTGAGACGAGTGTCTCGGGGCGACTTCCTTTGAAATGGATTTTTGAAGGACAGTACCGGATGGCACGAGTGTGTCGGTATTGCGCCCTAGCCCGCGTGTTGGAGGTTGCTACATACACCCGCTATCCGGTACGGTATCCGCAAATGACTCGGCATGGGCACGGGAGGGCCTATGCCTCGATAGAACCCGGATGGATGGATGTTCGGGAAGTCCCGATGAGATGAACGACACGTGGGCCCATTCTCGATGGCATGACCGAACGAGTTATGATGAGCGACGACATCCCGAGACTCGGGATGGCGTCAAGACATATGGACCCTGTCGATGGGGATCGAGATGGCAAGATGAGATGCGACGTTGTATTGAGAGACCTTGGCCCGAGCAAAGGCAAGGTCGAGCCGAATGGGTTAGCCTAGCGTAGAGGCAAGTCGGATGTGTCGCAGATGATTGAACATACACGCACAGGCGGCGTGTGTGGTTGAACAAGCTTGGATTCCGCACAAGCGATGTTCGATTGGCGAAGGCAAACCTCGCCTAAGGTCCGACGAAGCCACAAAGCCGGGGTGAAAAATATAATGGGGCTTAATTCCCCTTAAGGCTGGTCGTGAGCGTGTATAGATCACGACGCCGCACGGTCAAGAATGTAGGACCGTGACACTCGGCACTGATAATGGTTTCGTCTTTCTTCTTCTTCTTCCTACCAACTTATTCATAGCTTTGTGGTGGCTGAATCTTCGTTCCCTCCACATCTTCTCTAGACAAGGAATAGGCAACGGACCAACGCTCTTTTCTTAGAAATTTAGTCGTTTCTTGTAATGACCCTGCCCACCGCTAGCAAATATTGTCCGCTTGGATGGTGAGATTCTGCATGTTGGAGAGGAGAATGAAATATTCTTTGTAAGGGTAAAGAAACTTGTCGGTAGAAACCTTTTTTGTAAGGGTGTGGAAACCTCTCATTTTAAAAACTGCAACAGTTGAGGAGGAGAACGAAACATTCTTTGTTAGGGTGTGGAAACCTCTCCTTTTAAAAACTGCATTGGGGAGGAGAACAAAACATTATTTTTAAGGGTGTGGAAACCTCTCCTTTTAAAAACTGTATCGGTTAAAGGGAGGATAACAAAACATTCTTTGTAAGGGCGTGGAAATTTCGCCGTAGTAGACAAAACATTTTTTGTAAGGGTATGGAAACCTCTTCTTTTAATAACTGCACTGGATGGGGAGGAGAACGAAACATTGTTTGTAAGAATGTGGAAATCTCTCTGTAACAAGCTGAACATTCATTATAACGGTGTGTAAACCTTTCTTTTAAAAACTTAGAGAAATCCCACAATATCTACTACCGTGGGCTTGGAAAATTACGTTTCTACCCACCATGTTTTTATATCTTATATTTATCAAAATATGCTAGTTAATTCTAATAATTATTAATACTTTTTGTTTTTGGCTTTATATTCAGAAGATTTCATTTTTTTCTTTAAATATTTATTAAAAAATAGTCTTGAAATTAACCCAATTCTTTCAAAGTATTTATTTATTAATTAATTTGTATTGGCTTAATTTTATTGTTAATATTCTCTATTGCATATATATTATTTAAAATATAATATTAAATTCCTGTTTTGTTTTTTTCTTCATGTTCTTAAGTATGCAGGCGCTGCTTGAGAAGCATAGCAGTGTCCATTCAGAGAACCTTCCAAATTTGAATGAACCATCGGTGGAGTTTCAGGTCAGTTCTGCTTTCAAATCAGATCCATTTAGGGCAAAACTGGACTATACTTTTATATATATAACCCTAATTTAGATCTAGAACATTTTAAAAACTTTAAAAACAACTTTAATTCTTTTCAAAAAAATGTTCAAAAATACTCTTACGGTAAGTATATGGACGAAACTGTTAGTACCACGTTTCAAAAATATCTATGAACTTACAAAAGTAATATTAAAATGTTTGGAGATGATCGATGAGGTGTAATTAAACCGTTTTTATCCATATATTGACGGTAATAACTTTTTTTTAGACATTTTTTTTATAAATTTTTCTCAGTATTTTTTAAACATGGTACTAATAGTAAGAGTATTTTTAAACTTTTAAAAAAAGTTCAGTATCAAATAAATTTTTTAGAGTTTAAGGGTATTTTTGAAACATTATTGAAATTGCAAGGATATGATTTTCATTCAAACCTAATGGTAAGGGTATTTTTGAAATATTTTAAATAGTTTATGGGTATTTTTTTTAGACGAAGTACTAGTTTTAGGGTTATTTTTATTAATTTAGCAAACAAATCTTTAATGAACTACGAAGATAATGCTAATTAGTAGAAAATGATATTATAGATTAAGTTAAATTACAAGTTTAGTATCGAAACTTTTAGGTTGATGTCCTAGTTTGTTTTTTGAACTTCCACCTTTTGGTTTAATAGATCATTAAACTTTAATGACGTCTAATATGTCCTTAACATATCTATTTAGGATAAAATTAAATTTAGTGAGTTGCAAGTTCGAGAATTTAAAAAAAAAAAATGTTGATGAATTAGAGATTTATTACGTATAAAACTAAAATCATAAGGACCTTATTAGAGACTTTGAAGTTTAGAGATATATTGATACTCGAAGATGAAGAACTTTAACGGGTTGTCGATTTGAATCTCTCTGTTCGACCTATACGGTAATATTTCCAAACAAAATAGTAATGTCTTCGAGATTTGACCATGTTTTTAACAGCTAGAGAGTAATATCCGAGCCAAGTTGAACGACGAAGTGGAGAAAAAGAGGCATGAACTAAGGTGAGTATGCAAAACCAATAAGGCACTGAAAATGGTAGCATTTGTAAGGCAGGCTTTGTATGAATGTGTGTAACAAACAGGCAAATGAAGGGAGAGGAGCTTCAAGGATTAGGGCTTGAAGAGCTGAAGAAATTAGAGAAATCTCTTCTTGGAGGACTCACCCGTGTTGCAGAAATGATGGTTAATTCTATCACACTGCTTTTTTGGGTTTAAATATCTTAATTTAATCTAAGTTGGTAAATGAATTTGATTGAAACTCTTTTGTATATTATGTTTCAGGATGGAAGAAATGCTGAATTGATCTGTGATATTGGAAGGAAGGTAAACGATTACGATTACGATTACGATTTCGTTTTTCGTTTTCTGTTTCTGAACTTATATTTGTTTGTTTCTCGTTTTCCCGTTTTTCGTTCCTTAGAAGGAAATACTCGAATTCTTTAAACAAAAACCATTTTTTCGAAACTTGGATTAGGGTTTTCGATAGTGTTGGATAACGACACAAAGAAGTTTATAGGTGTAAGTAGTGTTTATAGATTTGAATTTCGAGACTAAAAACAAGAAAACAAATGGTTATCGAATGGGGTTTAAGTTATTTAAATTTATTTCTACGGATACCGTTCATCAGGATATCTAAGAGCTCTGTTAGAACTCTTCTCTGGCTAACAAATGATATTAAGTCGGAGATGTTAAATTACTACTTAACCCAAAAGCTTTAACGGATAAATTGTAGCAAGTTTAATTACGATCTACGTTCATGCCATCTCCTTGATCCTATACTTTTTCTAAGTCTCCGTACAAAACTCAAATATGTGTCTTACAATGCCTACAACATGTCCCTCCTCTCAATCGAGTCCAATACATTTGTAAAAATAAATCCATTAGCGTAAGCTTTTAGGTTCAGTGGTGAGATCTAAGCTCGGATTTCGATATGATAAGATTCTTGGTCACAATATCATATAGACACGTTTCATTATAACCCTTTTTGGTTCAAAGTGAAAGGAACAACGAACCTTCACAATAGTATGATATTGTCCACTTTAAGTATTAAGTCATCGTGATTTTCCTTCAAGGTGTTTCAAAAGATCTCATACCTATGGAAACAACGTTACCTATTTATATTAGCTAACATGGGACTCCAACACTCCTCAATACATAGAACATTCTAATTGGATCAAACACTTCGAATTTAATATTGAAAGACAACAATTTAGGCCAATGATTGAACTTGTCTTTATTAATCCTAAGACCAAATATCACTTCGGAGAAGGATAAAAAGCCAATTACAAAGTAGCTTTTATCGTTGAACAAAAGAAAAGGGTGCGGCCCTTACCAATTGATACTAATTTTGCCCAAGTCTACCGTTAGCAAATAATATTCTCTTTAGACATTCGCTCAAGGCTTTAAAATGCGTGTGATATGGAAATGTTTCCACACCCTTATAAATGATGTTTCGTTCTCCTTCCCAATCAATGTGGGATATCACAATCCATCCCCCTTCAGGGCCCGCGTTCTTGCTGACCCTCGTTTCTTTCTCCAATTGATATGAGACCCATACCAAATCCATCCCCCTCGAGGCCTAGCGTCCTTACTGGCACATCACATCGTGTCTACCCCTTTCGGAGAATAGCCTCCTCGCTGACACATGGTCCAGTGTTTGACTCTGATACCATTTATAATGGTCCAAGCCCACTGCTAGCAGATATTGTCCTCTTTGGGTTTTTCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGTGTTTGCTATGGATGAAAATGTTTCCACACCCTTAGAAATGATGTTTCTCTCTCCTCCCCAACCAATGTGAGATATAACAATCTACCATAAAAATAAAGGGTCAAACAATTGTAGCGGAAGCAAGATCGATCACACTCACACACCCACAAATTAGAATAAACAAAGAAACACAAAGATCTACGTGGTTCGGAGAGAAGAAATTTTCCTACATCCACGAGTGACAACCAATCACTATGATCAAAGTATTTACAAAGGGTATATCTCACACCCACACACAACAAAAACTCACTCACAATTTTTCTCTCAAATTTCTCTAGGTAAATAGAAAATGACACTCAATCTAGATGTCTCTCAACAATGTTTGACAATCCTTTATATAGACATAGAAACATTAATACTAGTACATGAATTAAAATGATTCATGTATTAATATGAGGGAAAGTTCGACTTTCCTCCAGTGTCTCTAAAAACAACTAAATTTCAGTCATTTAGAATTCGAATTCCTTGAGCGTCGTTGAGCTTTCTAAATGGAAGCCTTTGCACTTTCCATCTTCCCTACCATTCTACCCTCACGAAATTGAAGTTTTAAATATTCACATGGATAGATTTTGGGCCAAATCTAAGAAATTCATTAGACATCTTAGAGTTTAGATTCATTTGGTTAGATGCATAAATCACTGTAATGATAGTACATGTATGACGTAGATTCGTTATTTAATATTCAATATATGTATGATCATGGAGGATGTTCTAAAAGACTTATATAAAGATCATCAATGTCGAGATTTTAAAGAAAAAAATGAAATTGAATGTTAGAGAATTCTATTCTTTTATGTTTGACTTGTAAGGGTATCCATGTCATATCTTCTATGGTGTCTTTAAATCCATTGGCACAGATAATTAGTTGTTGATGATAAGGCACTACCCCATTTTTTCGTTAGGGTATATAAAAAAAAACAATATCTCGATGGGTATGAAATATGTTGGGTGGTTCCAAAAGAAAAATCATAAAAATTTGCGTTCAAAGTGAACACTATCTTACCAGGTTTAAGATATGTTGAATGTTGTTGTCTTAACCAAGTGGTATCAGAGGTATCAAAGTCATGGTTTATAACGGCTTAAGCCCACTATTAACAGATGTTGTCTTATTTGGGTTTTCGAGCTTTTTTTTCAAGGTTTTTGATAAGATAAGGAATCAATACAAGAGGAATAAGATTCGGACTATCTTGTTGATCGAATATCTCAAGGCAAGAATATTGTCTGAGGTTCGAATTATCAAGTTTATGCAAAACTGTACCTCACACTATTGAGGACATATTCTATTTATATTGGCAAAAGATTAACTAATAGATCCGATTTCATAGGAAACTAACGAAGTAAGCCTATTCTTATGGCATGACTAACTTCAAGCTATTCTAATGGATTGACCAATTCTAACAGTCCCCTTCAATCCCAACAAGTCTTGTACATGTTGAGATTGTTACAATGTGTAGTAAAAGGAGTTTTAGACAGTGGTTTTGTCAGGATATCAGCTACTTGATCACTTGATGAAATGAACCGAACTTCCATTGCTTTACGTGCTACTTGTTCTCGAACAAAATGAAAATCAACTTCAATATGTTTCGTTCTAGCATGAAATACTGGATTTGAAGTTAAATATGTAGCTCCGAGGTTGTCACACCAGAGGCGAGGAGCCTTTGATTGATACACGCCCAGTTCCTTCAGTAATGACTTGATCCAAATCATTTCTGCAGTAAGATTCGCAATGGCCTTGTATTCTGCTTCGGTGCTTGATCTTGACACTGTAGCCTGTTTTCTGGAACTCCATGAGATTAGATTTGCTCCAAGAAATACAGCAAAGCCGCTAGTTGAACGTCGATCATCGGGACAACCAGCCCAATCAGCATCAGAAAACCCCGACAACATCATGGTTGATTTCTGAATTTTCACTCCTAATGCTAGTGTGCCTTTAACATAACGAAGAATTCTCTTCACAGCACCCCAATGAGCATCAGTAGGTGTATGAAGATATTGACACACTTTATTGACAGCAAATGCCAAATCAGGCCTAGTCATTGTCAAATATTGTAGTGCTCCCACTGTACTTCTGTATTTGAATTGTTCTTCAGCTGATAAGGGTATTCCTTGTTCTCTGAATAATTTTTCAGCAGAACCCATTGGTGTAGACATAGGTTTGCATTTTTCCATGTTTACTCTTTTCAACAAATCTAAGGCATATCGTCTCTGTGACAGTATGATACCATCTCGTGTTTTCTTGACTTCAATACCCAGAAAATACTCAAGACCACCCAAATCTTTTACTGCAAAATCTATTTTCAATTTCTGAATCAACCTTTCGGTTGCTTGATCAGAGGAGCTCACAATAATTATATCATCAACATAGATGAGCATATAGATAGTTATCTCTCTGTTTTTGAGAATAAAAAGAGATGAATCAGCTACTGAAGCCTTGAAGCCTAACTCAATAAGTTTTCCAGTCAACCTTGAATGCCAAGCTTTTGGGGCTTGTTTCAGGCCATAAAGGGCTTTCTTGAGCTTGCATATGTAATTCTTTGGTTTGGCTGAGTCTTGAAATCCTGGTGGTTGTCGCATGTACACTTCCTCTTTCAGAATTCCATGCAAAAATGCATTTTGGATATCAACTTGTCTCATATTCCAGCCCTTGGTTACTGCTAGCGAAAGAATGACCCTGATTGTTGACGGTTTGATCACAGGGCTAAAAGTATCAGTGTAATCAACACCAAATCTTTGCTTGAATCCTTTGGCAACTAATCTTGCTTTTAATCTTTCAACTGACCCATCTGCTTTTCTTTTCACTTTATACACCCATTTACTATCAATGAGATTTATTCCAGGTTTGGGTGGAACTAGATCCCAAGTGGCATTTCGTTTTAGCGCTGAGAGCTCATCATTCATTGCTCCTCTCCATCTTGGATGTTGCATGGCTTCCTGCAGGTTTCGAGGTTCAGTAGCAGTCTCTATGATCGGAGTTGTGATAGTTACAGCGCTTGCGAATTTTCTTGAGGTTTCTGAATATCTGATAGTTCCATCAGTGAATTGTTTAGCTTGTACAATGTTATTTCTCAACCTTGTTCGCATTGGATGTTGACTAGCTGCTTCAGTTGGTTGATCAGACACATGTTCATGAGTTTGGTTTTGAGCATTGATCGAACTGCTCTCAGCTTCATATTCTGCAATTTCCTCTGAACTTCTTGTATTATCTGCAGAAGATAAGCTGACACCAGACAAGTTGTCACTAGCAATATTATCAGTTTGACCATCATTCATATGGGAATTACTAACAACTGGTTCAATATCTGTAAGAGCATTTTCAGTGTAAAAACTAGCAAGTTTGGCTAAGGCTGGAAGTAGAACAGGATGATGTGGATTTGTGGTTTTGTTTGGTGGCTTAGATTCTTCAAAAGGAAAAATATTTTCATCGAAAACCACGTCTCTAGAGATGTAAATACGTCCTGTACTTCTATTTAAGCATTTATATCCCTTATGAGAAGAACTATAACCCAAGAATATACATCTAGTAGTTCTGAAACTCAGTTTCTTGTTGTTGTAAGGCCTTAAATTAGGCCAGCAAGCACAGCCAAACACCCTAAGCATGGAGTAGTCTGGACTTTTACCAAACAATTTATGAAGTGGTGTGTCTTGTTGTATGGTTCGGCTGGGCATTCTATTTATAAGAAAGCAAGCTGTGTTGAAAGCTTCATCCCAGTAGGATAGAGGCATGTTGGCTTGAGCGAGTAAAGCAAGGCCAGTTTCTACAATGTGTCTGTGTTTTCTTTCGACTAACCCATTCTGCTGGTGTGTGTGAGGACAGGAGATATGATGTTCAATGCCTGTGGATTTGAAATAATTGTGTAACCGATGGTATTCACCCCCCCAATCTGATTGGACGGAGCGAATTTTGGTATTTAGCATAGTTTCAACATGTTTTTGAAATTGAAGGAACACAGACTCAACATCAGATTTGCATCTCAGAAAGTAAATCCAAACATAACGACTAAAATCATCAACAAAGGAAACATAATATTTGGAATTATTTACTGACGCAATGGATGGACCCCATACATCAGTGTGAATTAATTGAAGGGGTGCTGTAGATACATGCTGAGAAGAACCAAATGGCAATTGATGTGCTTTCCCTAATTGACAAGCATTACAAATTGAGGAAGAGGGAATATTAGTATCTATAGCTAAATTATTATCTTGTAGAATTCTAATGGTAATTGGAGATGCAGGGTGCCCTAGCCTTCTGTGCCATTGTTCTTTCGAAAGTTTGGCTGTCAGCAAGGCTTGACTGAAATTATGCGGTAGAACGTATAGGCCATTCTTACATCTACCGTGGAGCAGGAGTTTCTTCGTGACTCGGTCCTTAACCAAAAAATAGTTTGGGTGAAATTCTACAACAGCATTATTATCAGATGCTAGTCTTTGTACTGAAATTAGGTGCTTATTGATTTTAGGAACATATAGGATATGTTTCAGAACAAGAGATGAACCAGAAATTAATGAATTCCCAATATGAGAGATAGACAAACCTGCGCCATTTGCAACCTGAATTTGGTCGGTGCCAGTGTAGCGTTCTCTGGTGGTAAGCCTCTCTAGGTCATTGGTGATATGATCTGTGGCTCCAGTGTCAACATACCAGTTTGTGTCACTAGTGTATCCACTTGTTGCCAAAGCTGCTTGTTTGAGATTATTTTCGGCTTGATATGCCTGATCAAATCTGTGCCAGCATTGCAAAGCATCGTGATTGGGCTTACCACAAATCTGACAGACAATGCCTGAGCTGCTTTGTGTCTTTGATGGTTGACGTCCAGGATTGTTCACAGTACGCCTTGATTGTCCATGACCACTATTTAACTGACGACTACGACCGCGACTACCTCGACCTCCATTGGCACCTCCACGAATGGATATCCTATTGACATTGTTAGCAGATGAAAGTTGCTCAAATGTACCCTTACGCAAGTGCCGCATCTCATAGCTCAGCATGTGAGCATACACGTCGCTGACAGTGTATACATCTGTTCTGGTTGTAATGCTTGTGACTAGAGGATCATAATCTGGACCAAGTCCTTGCAGCATGTAGGCGATGAGTTCTTCATCCTCTATTCGCTTGCCAATGGCAGCAAGTGTATCACCAAGATGTTTTACTTTACGAAAGTAGTCAGCAATTGTCATGTCCTTTTTCTGGATAGTAGAGAGTTCCATACGGATCTGCATTGCTCTTGCTCGAGATGTGGAAGCAAATTGTCGCTCCAGCGTAATCCAGGCTTCTCGTGCAGTGGTGATTCCAACCATCGTGCTGAGAACCTCCTCAGTGACTGATGAGTTGATGAGGCTGAGTACCAGCTGGTCCTGGGGGTACCAGACTGTGAACTCAGGGTTGATGATAATTTTGCGATTCCCTGTTTCTTCACTTGGTTCAACGGCGATCGTCTGGCTTGGTGCAGGCATGGATCCATCCACAAAACCAACAAGGTTTTGGCTACGCAAGTAGGGAAGGATTTGGGTAGACCACAGTAGATAATTTTCTTGTGTAAGCTTAACACTAATCACCTGACTGATCGACGGAGAAGACATTGTGTTGTTTGGGATTGACATGTCTAACAGCAGAGGCTATGGATCTCGTGGATCTTATTTCGGCTCTGATACCATATCAAGTTTATGCAAAACTGTACCTCACACTATTGAGGACATATTCTATTTATATTGGCAAAAGATTAACTAATAGATCCGATTTCATAGGAAACTAACGAAGTAAGCCTATTCTTATGGCATGACTAACTTCAAGCTATTCTAATGGATTGACCAATTCTAACACGAATCACTCTACAAGCAAGATCGATTATGTCTAGTTTGAATGATTCTTGTTGATCAAATATCTCAAAGCAAGAACACTTGTTTGAGATTTGAATCACTCTAAAAGCAAGATTGATCATGTCGAGCTTGAATGATTGTACATGCAACCTAAACTACATAGAATTGCAAAGAAACTTAGTCATTGGCTAAAGAAAAGCACAAATGTTCTTTTACTATATTTTCCAAGTCTCCTTACAAATACAACATACAAGTCGTTATATAGCCTAAAAAATGAAACTATTAGAGGCATTACAAGAGTTGTAACATTCATATTTTATGACCATAATTAGCCATTATGTAAATGTAACCTAAAGTAAATAAAAAGTCTCCAAATATAATAACTCTAAATTGTAACCCACCTAAAATTTATAATAATCAAACTTCATTCTTCTTCAATGTGGCATAAATTGAAACATCTTTTGATAATTTTGACAACCTCTTCTTCACATCTTCATTGAAGTATATTGGATGATTGTTGTCTTTTGGTTCAAATCAGTTTTTAAAATACGTATGATAGGGAGAGGTTTCCACACATTTACGAAAGGTGTTTTGTTCCCTTCTACAACCGACGTGGGATCTGACATGCGTCTAACGTAGTTTGGAACAACCTTAATGACATTTTTCTCATTGTTGGATGCCTTTCATATTCCTTGTTTCACCCTTGTTTGAGCTTGTGACTTGTGAAGTTGAGCCATTGCCACCTTTTTGTTTATCCAAATGCTTTGGTTTCATCTTTTTGCTTGATGGTACTCAATTAACACCTTAGACTGTGTTCCAAGCAACTTATCTTTTCTGATAGAGCCACACAATTGTATCACTGCCGAGGGATCTTGACCACTTTACAAGAACTTGTGCTTTTTCCTTTTCAGTTGGTTCTTTCAGATAGGTAGTTGGTCTTAATCTGAGATCCCACGTTGGTTGAAGATTGGAGAGCGAAACGAAACATTTTTTATTAAGGGTGTGAAAACCTCTCCTTAGTAGACACGTTTTAAAACCATGAGGTTGATGGCGATACATAACGGGCAAAAGTCGATAATATTTGCTAGCGGTGGGTTTGGGCTCTTACAATGGTATCAGAGCCAGACACCGGGCGATATGCCAAAGACGACGTTGGGCTTCCAAGGGGGATGGATAATAAGATCTCACAGTAGTTGGAGAGGAGGATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACACGTTTTTAAACCATGAGGTTGACAACGATACGTATAGGCTAAAGTGAACAATATCTACCAGTGGCGGTCTTAGTCTGTTACACTTACGTAGGGTTACCTAAAAATTTTTGTTTGATGGTCGAGTAGCTTTACGAGTCTCTTGTCTCTATGTTTTTTTTTAAATTATTCGTTGGGTCTTATTCCTCGACTAGTCTTCTTGTGTTGGGTTGAAGAATGTGCGGGCTCGATGGCTATCAGAATCGAGACGTAATTGTCAATGAATTCTTAGGCCTCTTTTTCCAAAACCCACTTGAATTCATGTGATATTTCTTATGTTCTTGCTAGAAATGAATATCATAAATAGTTTTGAATGTGTTCAGGTTGATTTGCTGATAGAAGAAAATCAAAGATTGAACCAACTTGTGAGTATTAAAATCATCAGCTATTTAGTACCAATAATGAGATTAGAAAATGATTGCATTTGCATGGCAGGAGGTGGAGAAAATGGCATACCAAACACACAACATGCAAGGCCATTCTTCTGAATCAATAGTCAATAATTCTCAAGATTATGATAGCTCTGATACATCTCTCAAACTGGGGTTAGTTTTTTCTTAACAACTTGTTTGCTTGATCCATTTTTCCTTAGATTAACCACTTCAATCTTGTTTATAAACCTTATTTTCTCCAAAATCTTCCCTATTTTTTCTCGAGCTCTATACAAGAATTGAATGTTCAGAGTGAGTCCTTCGTTGATTAATTTAGGGAATGATCATGCGTTTATAAGTAAAGGAATACAGAATAATATCATACTATTGTGAAGTCAGTCCCACATTGGTTAATTTAGGAAATGATCATGCCTTGATGAAGGAGAGTCGTGATTGAATTAACTTTGTTGTTACTAATGATAGCGTTGTTGAAATGTTGTTGCAGATTGTCATTTCTTGAGCATTGAATTTTATTGCTACAGATTGGCACCTGAATGAACACAAAGATCTGCC

mRNA sequence

CTTTCTTTCTCTCTCTTCAACCCATTGGAGGGTTCTCCGAATAATGGTATCTTGTCTGCAACCCCTTCTCTTCAAGCTGTGTCAGTAATTAACCCCAAAAGCTACCAACGCCATTACCTCAAATTTAACCCAAAAATAAAATAAAATCAAATCAAATCAACACCTTCTTCTCTTGTTTTTCCTCGAAGAATCAAATTTTGGCATCAAATCTGAGGAAAAGGAATTGAAAGATGACGAGGAAGAAAATTCAGATCAAGAAGATCGACAACATAGCAGCAAGACAAGTAGCATTTTCAAAGAGGAGAAAAGGGCTTTTCAAGAAGGCGAAAGAACTTGCAATTCTTTGTGATGCTGAAATTGGCCTTCTTGTTTTTTCTGCTTCTGGCAAGCTCTTTGACTACGCAAGTTCAAGTATGCAGGCGCTGCTTGAGAAGCATAGCAGTGTCCATTCAGAGAACCTTCCAAATTTGAATGAACCATCGGTGGAGTTTCAGCTAGAGAGTAATATCCGAGCCAAGTTGAACGACGAAGTGGAGAAAAAGAGGCATGAACTAAGGCAAATGAAGGGAGAGGAGCTTCAAGGATTAGGGCTTGAAGAGCTGAAGAAATTAGAGAAATCTCTTCTTGGAGGACTCACCCGTGTTGCAGAAATGATGGATGGAAGAAATGCTGAATTGATCTGTGATATTGGAAGGAAGGTTGATTTGCTGATAGAAGAAAATCAAAGATTGAACCAACTTGAGGTGGAGAAAATGGCATACCAAACACACAACATGCAAGGCCATTCTTCTGAATCAATAGTCAATAATTCTCAAGATTATGATAGCTCTGATACATCTCTCAAACTGGGATTGTCATTTCTTGAGCATTGAATTTTATTGCTACAGATTGGCACCTGAATGAACACAAAGATCTGCC

Coding sequence (CDS)

ATGACGAGGAAGAAAATTCAGATCAAGAAGATCGACAACATAGCAGCAAGACAAGTAGCATTTTCAAAGAGGAGAAAAGGGCTTTTCAAGAAGGCGAAAGAACTTGCAATTCTTTGTGATGCTGAAATTGGCCTTCTTGTTTTTTCTGCTTCTGGCAAGCTCTTTGACTACGCAAGTTCAAGTATGCAGGCGCTGCTTGAGAAGCATAGCAGTGTCCATTCAGAGAACCTTCCAAATTTGAATGAACCATCGGTGGAGTTTCAGCTAGAGAGTAATATCCGAGCCAAGTTGAACGACGAAGTGGAGAAAAAGAGGCATGAACTAAGGCAAATGAAGGGAGAGGAGCTTCAAGGATTAGGGCTTGAAGAGCTGAAGAAATTAGAGAAATCTCTTCTTGGAGGACTCACCCGTGTTGCAGAAATGATGGATGGAAGAAATGCTGAATTGATCTGTGATATTGGAAGGAAGGTTGATTTGCTGATAGAAGAAAATCAAAGATTGAACCAACTTGAGGTGGAGAAAATGGCATACCAAACACACAACATGCAAGGCCATTCTTCTGAATCAATAGTCAATAATTCTCAAGATTATGATAGCTCTGATACATCTCTCAAACTGGGATTGTCATTTCTTGAGCATTGA
Homology
[Close]
BLAST of CmoCh19G004920 vs. Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.6e-45
Identity = 118/242 (48.76%), Postives = 158/242 (65.29%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R+KIQIKKIDN  ARQV FSKRR+GLFKKA+EL++LCDA++ L++FS++GKLFDY+SS
Sbjct: 1   MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIR-AKLNDEVEKKRHELRQMKGEELQGL 120
           SM+ +LE+   +HS+NL  L++PS+E QL  N   ++L+ E+ +K H LRQM+GEELQGL
Sbjct: 61  SMKQILERRD-LHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGL 120

Query: 121 GLEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQ---------- 180
            +EEL++LE+SL  GL+RV E    +    I  + +K   L+EEN++L Q          
Sbjct: 121 NIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVMEISNNNN 180

Query: 181 -------------LEVEKMAYQTHNMQGHSSESIVN--NS-----QDYDSSDTSLKLGLS 212
                         E E      +N  G SSES+ N  NS     QD DSSDTSLKLGL+
Sbjct: 181 NNNNGYREAGVVIFEPENGFNNNNNEDGQSSESVTNPCNSIDPPPQDDDSSDTSLKLGLA 240

[Close]
BLAST of CmoCh19G004920 vs. Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.5e-43
Identity = 114/239 (47.70%), Postives = 161/239 (67.36%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R+KIQI+KIDN  ARQV FSKRR+GLFKKA+EL++LCDA++ L++FS++GKLF++ SS
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQL-ESNIRAKLNDEVEKKRHELRQMKGEELQGL 120
           SM+ +LE+H ++ S+NL  L++PS+E QL E++  A+++ E+  K H LRQM+GEELQGL
Sbjct: 61  SMKEVLERH-NLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGL 120

Query: 121 GLEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQL------EVE 180
            +EEL++LEK+L  GLTRV E    +    I ++ +K   L++EN+RL Q       E E
Sbjct: 121 DIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQGTQLTEENE 180

Query: 181 KMAYQTHN----------------MQGHSSESIVN--NSQ----DYDSSDTSLKLGLSF 211
           ++  Q  N                 +G SSESI N  NS     D +SSDTSL+LGL +
Sbjct: 181 RLGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNSTGAPVDSESSDTSLRLGLPY 238

[Close]
BLAST of CmoCh19G004920 vs. Swiss-Prot
Match: AGL24_ARATH (MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-38
Identity = 101/217 (46.54%), Postives = 149/217 (68.66%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R+KI+IKKIDNI ARQV FSKRR+G+FKKA EL++LCDA++ L++FSA+GKLF+++SS
Sbjct: 1   MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60

Query: 61  SMQALLEKHSSVHSENLPNL-NEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGL 120
            M+ +L ++ S+H+ N+  L + PS   +LE+   ++L+ EVE K  +LR+++GE+L GL
Sbjct: 61  RMRDILGRY-SLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGL 120

Query: 121 GLEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRL-NQLEVEKMAYQ 180
            LEEL++LEK L  GL+RV+E         I  + ++   L++EN+RL ++LE  + A  
Sbjct: 121 NLEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKLETLERAKL 180

Query: 181 THNMQGHSSESIVNNSQDYDS-------SDTSLKLGL 209
           T   +   +ES+  N   YDS       SDTSLKLGL
Sbjct: 181 TTLKEALETESVTTNVSSYDSGTPLEDDSDTSLKLGL 216

[Close]
BLAST of CmoCh19G004920 vs. Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.5e-38
Identity = 104/223 (46.64%), Postives = 150/223 (67.26%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R++ +IK+I++ AARQV FSKRR+GLFKKA+EL++LCDA++ L+VFS++GKL  +ASS
Sbjct: 1   MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGLG 120
           SM  +++K+++ HS NL    +PS++  LE +  A LN+++ +    LRQM+GEEL+GL 
Sbjct: 61  SMNEIIDKYNT-HSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLS 120

Query: 121 LEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRL-NQLE----VEKM 180
           ++EL++LEK+L  GL RV    D +  E I ++ RK   L EEN +L NQ+      EK 
Sbjct: 121 IDELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQ 180

Query: 181 AYQTHNM--QGHSSESIV-------NNSQDY-DSSDTSLKLGL 209
              T N   +G SSES++       + SQD  D SD SLKLGL
Sbjct: 181 VVDTENFVTEGQSSESVMTALHSGSSQSQDNDDGSDVSLKLGL 222

[Close]
BLAST of CmoCh19G004920 vs. Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2)

HSP 1 Score: 152.9 bits (385), Expect = 3.9e-36
Identity = 106/225 (47.11%), Postives = 148/225 (65.78%), Query Frame = 1 

Query: 3   RKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASSSM 62
           R++I I++IDN+AARQV FSKRR+GLFKKA+EL+ILCDAE+GL+VFSA+GKLF +AS+SM
Sbjct: 22  RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSM 81

Query: 63  QALLEKHSSVHSENLPNLNEPSVEFQLE-SNIRAKLNDEVEKKRHELRQMKGEELQGLGL 122
           + ++++++S HS+ L       ++ Q E S+  A+L +E+ +    LRQM+GEEL  L +
Sbjct: 82  EQIIDRYNS-HSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNV 141

Query: 123 EELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRL-NQLEVEKMAYQTH 182
           E+L++LEKSL  GL  V +    +  + I  + RK   LIEEN RL  QL+V +M+    
Sbjct: 142 EQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRMEE 201

Query: 183 NM----------QGHSSESIVNNS-------QDYDSSDTSLKLGL 209
                       +G SSES+ N S        DY SSDTSLKLGL
Sbjct: 202 MQPGPDSEIVYEEGQSSESVTNASYPRPPPDNDY-SSDTSLKLGL 244

[Close]
BLAST of CmoCh19G004920 vs. TrEMBL
Match: A0A076VWZ5_CAMSI (MADS-box transcription factor protein 1 OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.4e-48
Identity = 121/217 (55.76%), Postives = 157/217 (72.35%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R++IQIKKIDN+ ARQV FSKRR+GLFKKA EL+ LCDAEI L+VFSA+G+LF+YASS
Sbjct: 1   MVRQRIQIKKIDNVTARQVTFSKRRRGLFKKAHELSTLCDAEIALIVFSATGRLFEYASS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGLG 120
           S + ++E+H ++  +NL  LN+PS+E QLE++ RA L+ E E++  ELRQ++GEEL  LG
Sbjct: 61  STRQVIERH-NLQPQNLVQLNQPSLELQLENSTRAMLSKEAEERTLELRQLRGEELHELG 120

Query: 121 LEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQ-RLNQLEVEKMAYQT 180
            EELKKLEKSL GGL+RV +  D R  + I  + RK   L+EEN     Q++++ +    
Sbjct: 121 FEELKKLEKSLEGGLSRVLKTKDDRVEKEIAALRRKEARLMEENAWSKQQVQMQIVNMGQ 180

Query: 181 HNMQGHSSESIVNNS------QDYDSSDTSLKLGLSF 211
              QG SSESI NN       QDYDSSDTSLKLGL +
Sbjct: 181 PQEQGQSSESITNNGSTVAPPQDYDSSDTSLKLGLPY 216

[Close]
BLAST of CmoCh19G004920 vs. TrEMBL
Match: D7U6A4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0313g00070 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.3e-48
Identity = 122/226 (53.98%), Postives = 165/226 (73.01%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R+KIQIKKIDN  ARQV FSKRR+GLFKKA+EL++LCDA++ L++FS++GKLF+++SS
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFSSS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQL-ESNIRAKLNDEVEKKRHELRQMKGEELQGL 120
           SM+ +LEKH S+ S+NL  L +PS+E QL E+N  ++L+ EV  K H+LRQM+GEELQGL
Sbjct: 61  SMKEILEKH-SLQSKNLEKLEQPSLELQLVENNNHSRLSKEVADKSHKLRQMRGEELQGL 120

Query: 121 GLEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQLEVE------ 180
            +E+L++LEKSL  GL+RV +    R  + I D+  K   L+EEN+RL Q  VE      
Sbjct: 121 NIEDLQQLEKSLEAGLSRVIQKKGERIMKEITDLQSKGVQLMEENERLRQQVVEISNRRR 180

Query: 181 KMAYQTHNM---QGHSSESIVNNS------QDYDSSDTSLKLGLSF 211
           ++A  + NM   +G SSES+ N S      QDY+SSDTSLKLGL +
Sbjct: 181 QVAGDSENMFHEEGQSSESVTNVSNSNGPPQDYESSDTSLKLGLPY 225

[Close]
BLAST of CmoCh19G004920 vs. TrEMBL
Match: H6BF96_ACTDE (SVP4 OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-47
Identity = 123/216 (56.94%), Postives = 155/216 (71.76%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R++IQIKKIDN+ ARQV FSKRR+GLFKKA+EL+ LCDAEI L+VFSA+G+LF+Y+SS
Sbjct: 1   MVRQRIQIKKIDNLTARQVTFSKRRRGLFKKAQELSTLCDAEIALIVFSATGRLFEYSSS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGLG 120
           SM  ++E+H+ +   NL  LN+PS+E QLE++  A L +EVE+K  ELRQ++GEEL GLG
Sbjct: 61  SMNQVIERHN-LQGNNLVQLNQPSLELQLENSTYAMLCNEVEEKTRELRQLRGEELHGLG 120

Query: 121 LEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQLEVEKMAYQTH 180
           +EELKKLEKSL  GL RV +  D +  + I  + RK   L EEN  L Q    ++A  + 
Sbjct: 121 VEELKKLEKSLEEGLGRVLKTKDEKFEKEITALKRKETRLREENLWLQQR--LQIANAST 180

Query: 181 NMQGHSSESIVNNS------QDYDSSDTSLKLGLSF 211
             QG SSESI NN       QDYDSSDTSLKL L F
Sbjct: 181 PEQGQSSESITNNGSSTAPPQDYDSSDTSLKLSLPF 213

[Close]
BLAST of CmoCh19G004920 vs. TrEMBL
Match: A0A076VZW4_CAMSI (MADS-box transcription factor protein 2 OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.5e-47
Identity = 124/221 (56.11%), Postives = 157/221 (71.04%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R++IQIKKIDN+ +RQV FSKRRKGLFKKA+EL+ LCDAEI L+VFSA+GKLF+++SS
Sbjct: 1   MVRQRIQIKKIDNVTSRQVTFSKRRKGLFKKAQELSTLCDAEIALIVFSATGKLFEFSSS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGLG 120
           SM+ ++E+H ++ S NL NLN+PS+E QLE++    L+ EV KK HELRQ++GEELQGL 
Sbjct: 61  SMRQVIERH-NLESGNLVNLNQPSLEQQLENSGCTILSKEVNKKIHELRQLRGEELQGLD 120

Query: 121 LEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQ---LEVEKMAY 180
            EELK LEKSL GGL+RV +       + I    RK   L+EEN  L Q   +E+ K+  
Sbjct: 121 AEELKNLEKSLEGGLSRVLKTKGEIMEKEITARERKEARLVEENVWLKQKVPMEIVKIGQ 180

Query: 181 QTHNMQGHSSESIVNNS------QDYDSSDTSLKLGLSFLE 213
              + QG S+E I NN       QD DSSDTSLKLGL F E
Sbjct: 181 THDDQQGQSAEFITNNGSSAAPPQDNDSSDTSLKLGLPFPE 220

[Close]
BLAST of CmoCh19G004920 vs. TrEMBL
Match: H6BFA0_ACTCH (SVP4 OS=Actinidia chinensis PE=2 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.4e-47
Identity = 121/217 (55.76%), Postives = 155/217 (71.43%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R++IQIKKIDN+ ARQV FSKRR+GLFKKA+EL+ LCDAEI L+VFSA+G+LF+Y+SS
Sbjct: 1   MVRQRIQIKKIDNLTARQVTFSKRRRGLFKKAQELSTLCDAEIALIVFSATGRLFEYSSS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGLG 120
           SM  ++E+H ++  +NL   N+PS+E QLE++  A L +EVE++  ELRQ++GEEL GLG
Sbjct: 61  SMNQVIERH-NLQGDNLVQQNQPSLELQLENSTYAMLCNEVEERTRELRQLRGEELHGLG 120

Query: 121 LEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQ-LEVEKMAYQT 180
           +EELK LEKSL GGL R+ +  D R  + I  + RK   L EEN  L Q L++   +   
Sbjct: 121 VEELKNLEKSLEGGLGRILKTKDERFEKEITALKRKETRLREENLWLQQRLQIVNASTPE 180

Query: 181 HNMQGHSSESIVNNS------QDYDSSDTSLKLGLSF 211
              QG SSESI NN       QDYDSSDTSLKL L F
Sbjct: 181 ---QGQSSESITNNGSSTAPPQDYDSSDTSLKLSLPF 213

[Close]
BLAST of CmoCh19G004920 vs. TAIR10
Match: AT2G22540.1 (AT2G22540.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-44
Identity = 114/239 (47.70%), Postives = 161/239 (67.36%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R+KIQI+KIDN  ARQV FSKRR+GLFKKA+EL++LCDA++ L++FS++GKLF++ SS
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQL-ESNIRAKLNDEVEKKRHELRQMKGEELQGL 120
           SM+ +LE+H ++ S+NL  L++PS+E QL E++  A+++ E+  K H LRQM+GEELQGL
Sbjct: 61  SMKEVLERH-NLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGL 120

Query: 121 GLEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQL------EVE 180
            +EEL++LEK+L  GLTRV E    +    I ++ +K   L++EN+RL Q       E E
Sbjct: 121 DIEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQGTQLTEENE 180

Query: 181 KMAYQTHN----------------MQGHSSESIVN--NSQ----DYDSSDTSLKLGLSF 211
           ++  Q  N                 +G SSESI N  NS     D +SSDTSL+LGL +
Sbjct: 181 RLGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNSTGAPVDSESSDTSLRLGLPY 238

[Close]
BLAST of CmoCh19G004920 vs. TAIR10
Match: AT4G24540.1 (AT4G24540.1 AGAMOUS-like 24)

HSP 1 Score: 161.4 bits (407), Expect = 6.2e-40
Identity = 101/217 (46.54%), Postives = 149/217 (68.66%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R+KI+IKKIDNI ARQV FSKRR+G+FKKA EL++LCDA++ L++FSA+GKLF+++SS
Sbjct: 1   MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60

Query: 61  SMQALLEKHSSVHSENLPNL-NEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGL 120
            M+ +L ++ S+H+ N+  L + PS   +LE+   ++L+ EVE K  +LR+++GE+L GL
Sbjct: 61  RMRDILGRY-SLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGL 120

Query: 121 GLEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRL-NQLEVEKMAYQ 180
            LEEL++LEK L  GL+RV+E         I  + ++   L++EN+RL ++LE  + A  
Sbjct: 121 NLEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKLETLERAKL 180

Query: 181 THNMQGHSSESIVNNSQDYDS-------SDTSLKLGL 209
           T   +   +ES+  N   YDS       SDTSLKLGL
Sbjct: 181 TTLKEALETESVTTNVSSYDSGTPLEDDSDTSLKLGL 216

[Close]
BLAST of CmoCh19G004920 vs. TAIR10
Match: AT4G37940.1 (AT4G37940.1 AGAMOUS-like 21)

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 88/222 (39.64%), Postives = 129/222 (58.11%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R KI I++ID+  +RQV FSKRRKGL KKAKELAILCDAE+GL++FS++GKL+D+ASS
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGLG 120
           SM++++++++    E    LN P+ E +      A L  E+   +   RQM GE+L GL 
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLN-PASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLS 120

Query: 121 LEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEEN-------QRLNQLEVE 180
           + EL  LE  +   L  +    +    + I ++ +K +L+ +EN       QR++Q  VE
Sbjct: 121 VNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVE 180

Query: 181 --KMAYQTHNMQGHSSESIVNNSQDYDSSDTSLKLGLSFLEH 214
             K AY   N  G +   +       D S T ++L LS  EH
Sbjct: 181 LYKKAYMA-NTNGFTHREVAVAD---DESHTQIRLQLSQPEH 217

[Close]
BLAST of CmoCh19G004920 vs. TAIR10
Match: AT3G57230.1 (AT3G57230.1 AGAMOUS-like 16)

HSP 1 Score: 119.4 bits (298), Expect = 2.7e-27
Identity = 84/223 (37.67%), Postives = 131/223 (58.74%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R KI IK+I+N  +RQV FSKRR GL KKAKELAILCDAE+G+++FS++G+L+D++SS
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGLG 120
           SM++++E++S    E   + N+P+ E Q      A L  ++   +   RQM GEEL GL 
Sbjct: 61  SMKSVIERYSDAKGET-SSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLS 120

Query: 121 LEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQ---------LE 180
           +E L+ LE  L   L  V    D    E I  + R+ +L+ +EN  L++         +E
Sbjct: 121 VEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNME 180

Query: 181 VEKMAYQTHNMQGHSSESIVNNSQDY-DSSDTSLKLGLSFLEH 214
           + +   +   ++  +  S++ N  D  D+S+  + L LS  +H
Sbjct: 181 LHEKVSEVEGVKIANKNSLLTNGLDMRDTSNEHVHLQLSQPQH 222

[Close]
BLAST of CmoCh19G004920 vs. TAIR10
Match: AT2G14210.1 (AT2G14210.1 AGAMOUS-like 44)

HSP 1 Score: 110.9 bits (276), Expect = 9.6e-25
Identity = 77/204 (37.75%), Postives = 122/204 (59.80%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYAS- 60
           M R KI I++IDN  +RQV FSKRR GL KKAKEL+ILCDAE+G+++FS++GKL+DYAS 
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSSTGKLYDYASN 60

Query: 61  SSMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGL 120
           SSM+ ++E+++ V  E    LN  S E +      A L  +++  +   R++ GEEL G+
Sbjct: 61  SSMKTIIERYNRVKEEQHQLLNHAS-EIKFWQREVASLQQQLQYLQECHRKLVGEELSGM 120

Query: 121 GLEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRL---------NQL 180
              +L+ LE  L+  L  V    D      I ++ RK  ++ +EN  L           +
Sbjct: 121 NANDLQNLEDQLVTSLKGVRLKKDQLMTNEIRELNRKGQIIQKENHELQNIVDIMRKENI 180

Query: 181 EVEKMAY-QTHNMQGHSSESIVNN 194
           +++K  + +T+ ++G+SS   ++N
Sbjct: 181 KLQKKVHGRTNAIEGNSSVDPISN 203

[Close]
BLAST of CmoCh19G004920 vs. NCBI nr
Match: gi|778724526|ref|XP_004136891.2| (PREDICTED: MADS-box protein SVP-like [Cucumis sativus])

HSP 1 Score: 330.9 bits (847), Expect = 1.7e-87
Identity = 183/220 (83.18%), Postives = 199/220 (90.45%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS
Sbjct: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGLG 120
           S+Q +LE+H+SVHSENLPNLNEPSVE QLESNIRAKLN+EVEKK HELRQMKGEELQGLG
Sbjct: 61  SIQEILERHNSVHSENLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLG 120

Query: 121 LEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQLEVEKMAYQ-T 180
           +EELKKLEKSL GGL+RVAE+MDG+N +L+ DIGRKVDLLIEEN+RLNQLEV+K+  Q  
Sbjct: 121 MEELKKLEKSLQGGLSRVAEIMDGKNTDLLSDIGRKVDLLIEENKRLNQLEVDKLGEQIM 180

Query: 181 HNMQGHSSESIVNN-------SQDYDSSDTSLKLGLSFLE 213
            N+QGHSSESI NN       SQDYDSSDTSLKLGL  L+
Sbjct: 181 QNIQGHSSESIGNNSTSSNNPSQDYDSSDTSLKLGLPLLD 220

[Close]
BLAST of CmoCh19G004920 vs. NCBI nr
Match: gi|659110273|ref|XP_008455140.1| (PREDICTED: MADS-box protein SVP-like isoform X1 [Cucumis melo])

HSP 1 Score: 325.1 bits (832), Expect = 9.2e-86
Identity = 180/222 (81.08%), Postives = 200/222 (90.09%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS
Sbjct: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGLG 120
           S+Q +LE+H++VHS+NLPNLNEPSVE QLESNIRAKLN+EVEKK HELRQMKGEELQGLG
Sbjct: 61  SIQEILERHNNVHSDNLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLG 120

Query: 121 LEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQLEVEKMAYQ-- 180
           +EELKKLEKSL GGL+RVAE+MDG+N+EL+  IGRKVDLLIEEN+RLN+LEVEKM  Q  
Sbjct: 121 MEELKKLEKSLQGGLSRVAEIMDGKNSELLSVIGRKVDLLIEENKRLNELEVEKMGEQII 180

Query: 181 THNMQGHSSESIVNN-------SQDYDSSDTSLKLGLSFLEH 214
             N+QG+SSES+ NN       SQDYDSSDTSLKLGL  L++
Sbjct: 181 MQNIQGNSSESVGNNSTSSNNPSQDYDSSDTSLKLGLPLLDY 222

[Close]
BLAST of CmoCh19G004920 vs. NCBI nr
Match: gi|659110275|ref|XP_008455141.1| (PREDICTED: MADS-box protein JOINTLESS-like isoform X2 [Cucumis melo])

HSP 1 Score: 293.1 bits (749), Expect = 3.9e-76
Identity = 168/222 (75.68%), Postives = 186/222 (83.78%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS
Sbjct: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGLG 120
           S+Q +LE+H++VHS+NLPNLNEPSVE QLESNIRAKLN+EVEKK HELRQMKGEELQGLG
Sbjct: 61  SIQEILERHNNVHSDNLPNLNEPSVELQLESNIRAKLNEEVEKKSHELRQMKGEELQGLG 120

Query: 121 LEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQLEVEKMAYQ-- 180
           +EELKKLEKSL GGL+RVAE+MDG+N+EL+  IGRK              EVEKM  Q  
Sbjct: 121 MEELKKLEKSLQGGLSRVAEIMDGKNSELLSVIGRK--------------EVEKMGEQII 180

Query: 181 THNMQGHSSESIVNN-------SQDYDSSDTSLKLGLSFLEH 214
             N+QG+SSES+ NN       SQDYDSSDTSLKLGL  L++
Sbjct: 181 MQNIQGNSSESVGNNSTSSNNPSQDYDSSDTSLKLGLPLLDY 208

[Close]
BLAST of CmoCh19G004920 vs. NCBI nr
Match: gi|719995510|ref|XP_010254525.1| (PREDICTED: MADS-box protein SVP isoform X2 [Nelumbo nucifera])

HSP 1 Score: 204.9 bits (520), Expect = 1.4e-49
Identity = 122/225 (54.22%), Postives = 164/225 (72.89%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R+KIQIKKIDN  ARQV FSKRR+GLFKKA+EL+ILCDAE+ L++FSA+GKLF+Y+SS
Sbjct: 1   MAREKIQIKKIDNATARQVTFSKRRRGLFKKAEELSILCDAEVALIIFSATGKLFEYSSS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGLG 120
           SM+ +LE+H ++HS+NL  L++PS+E QLE++  A+L+ EV +K H+LR+M+GE+LQGL 
Sbjct: 61  SMKEILERH-NLHSKNLQKLDQPSLELQLENSNYARLSKEVAEKSHQLRRMRGEDLQGLN 120

Query: 121 LEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQLEVEKMAYQTH 180
           +E+L++LEKSL  GL+RV E    R  + I ++ RK   L+EEN+RL Q  +E    Q H
Sbjct: 121 IEDLQQLEKSLETGLSRVLETKGERIMKEISNLERKGMELLEENERLKQQMMEMSKGQKH 180

Query: 181 ---------NMQGHSSESIVN------NSQDYDSSDTSLKLGLSF 211
                      +G SS+S+ N        QDYDSSDTSLKLGL F
Sbjct: 181 VGADSENIVYEEGQSSDSVTNVCSSSGPPQDYDSSDTSLKLGLPF 224

[Close]
BLAST of CmoCh19G004920 vs. NCBI nr
Match: gi|720069648|ref|XP_010277489.1| (PREDICTED: MADS-box protein JOINTLESS-like isoform X2 [Nelumbo nucifera])

HSP 1 Score: 202.6 bits (514), Expect = 6.9e-49
Identity = 122/226 (53.98%), Postives = 162/226 (71.68%), Query Frame = 1 

Query: 1   MTRKKIQIKKIDNIAARQVAFSKRRKGLFKKAKELAILCDAEIGLLVFSASGKLFDYASS 60
           M R+KIQI+KIDN  ARQV FSKRR+GLFKKA+EL+ILCDAE+ L++FS++GKLF+Y+SS
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSILCDAEVALIIFSSTGKLFEYSSS 60

Query: 61  SMQALLEKHSSVHSENLPNLNEPSVEFQLESNIRAKLNDEVEKKRHELRQMKGEELQGLG 120
           SM+ +LE+H+ +HS+NL  L++PS+E QLE++  A+L+ EV +K H+LRQM+GE LQGL 
Sbjct: 61  SMKEILERHN-LHSKNLHKLDQPSLELQLENSNYARLSKEVAEKSHQLRQMRGENLQGLN 120

Query: 121 LEELKKLEKSLLGGLTRVAEMMDGRNAELICDIGRKVDLLIEENQRLNQLEVEKMAYQTH 180
           +EEL++LEKSL  GL+RV E    R  + I  + RK   L+EEN+RL Q  VE    Q H
Sbjct: 121 IEELQQLEKSLETGLSRVLETKGERIMKEISTLQRKGVELLEENERLKQQIVEMSKGQRH 180

Query: 181 NM----------QGHSSESIVN------NSQDYDSSDTSLKLGLSF 211
            +           G SS+S+ N        QDYDSSDTSLKLGL +
Sbjct: 181 IISAESENLVYEDGQSSDSVTNVCSSIGPPQDYDSSDTSLKLGLPY 225

The following BLAST results are available for this feature:
BLAST of CmoCh19G004920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
JOIN_SOLLC4.6e-4548.76MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1[more]
SVP_ARATH2.5e-4347.70MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1[more]
AGL24_ARATH1.1e-3846.54MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1[more]
MAD22_ORYSJ2.5e-3846.64MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 ... [more]
MAD47_ORYSJ3.9e-3647.11MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 ... [more]
BLAST of CmoCh19G004920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A076VWZ5_CAMSI1.4e-4855.76MADS-box transcription factor protein 1 OS=Camellia sinensis PE=2 SV=1[more]
D7U6A4_VITVI5.3e-4853.98Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0313g00070 PE=4 SV=... [more]
H6BF96_ACTDE1.2e-4756.94SVP4 OS=Actinidia deliciosa PE=2 SV=1[more]
A0A076VZW4_CAMSI1.5e-4756.11MADS-box transcription factor protein 2 OS=Camellia sinensis PE=2 SV=1[more]
H6BFA0_ACTCH3.4e-4755.76SVP4 OS=Actinidia chinensis PE=2 SV=1[more]
BLAST of CmoCh19G004920 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G22540.11.4e-4447.70 K-box region and MADS-box transcription factor family protein [more]
AT4G24540.16.2e-4046.54 AGAMOUS-like 24[more]
AT4G37940.11.2e-2739.64 AGAMOUS-like 21[more]
AT3G57230.12.7e-2737.67 AGAMOUS-like 16[more]
AT2G14210.19.6e-2537.75 AGAMOUS-like 44[more]
BLAST of CmoCh19G004920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778724526|ref|XP_004136891.2|1.7e-8783.18PREDICTED: MADS-box protein SVP-like [Cucumis sativus][more]
gi|659110273|ref|XP_008455140.1|9.2e-8681.08PREDICTED: MADS-box protein SVP-like isoform X1 [Cucumis melo][more]
gi|659110275|ref|XP_008455141.1|3.9e-7675.68PREDICTED: MADS-box protein JOINTLESS-like isoform X2 [Cucumis melo][more]
gi|719995510|ref|XP_010254525.1|1.4e-4954.22PREDICTED: MADS-box protein SVP isoform X2 [Nelumbo nucifera][more]
gi|720069648|ref|XP_010277489.1|6.9e-4953.98PREDICTED: MADS-box protein JOINTLESS-like isoform X2 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
IPR002487TF_Kbox
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016043 cellular component organization
biological_process GO:0010629 negative regulation of gene expression
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
biological_process GO:0007165 signal transduction
biological_process GO:0051707 response to other organism
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0031347 regulation of defense response
biological_process GO:0032268 regulation of cellular protein metabolic process
biological_process GO:0048827 phyllome development
biological_process GO:0048869 cellular developmental process
biological_process GO:0051172 negative regulation of nitrogen compound metabolic process
biological_process GO:0006796 phosphate-containing compound metabolic process
biological_process GO:0051093 negative regulation of developmental process
biological_process GO:2000113 negative regulation of cellular macromolecule biosynthetic process
biological_process GO:0010073 meristem maintenance
biological_process GO:0045087 innate immune response
biological_process GO:0048438 floral whorl development
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0071310 cellular response to organic substance
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:0006464 cellular protein modification process
biological_process GO:0070727 cellular macromolecule localization
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G004920.1CmoCh19G004920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 23..38
score: 1.8E-24coord: 38..59
score: 1.8E-24coord: 3..23
score: 1.8
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
score: 3.9
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
score: 1.0
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 1..61
score: 28
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 2..79
score: 3.53
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 95..169
score: 6.
IPR002487Transcription factor, K-boxPROFILEPS51297K_BOXcoord: 87..178
score: 1
NoneNo IPR availableunknownCoilCoilcoord: 160..180
score: -coord: 94..114
scor
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 2..204
score: 9.6
NoneNo IPR availablePANTHERPTHR11945:SF179MADS-BOX PROTEIN SVPcoord: 2..204
score: 9.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh19G004920Cucsa.218320Cucumber (Gy14) v1cgycmoB0627
CmoCh19G004920Cucsa.331840Cucumber (Gy14) v1cgycmoB0909
CmoCh19G004920CmaCh16G002760Cucurbita maxima (Rimu)cmacmoB330
CmoCh19G004920CmaCh19G004750Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G004920Cla012907Watermelon (97103) v1cmowmB466
CmoCh19G004920MELO3C018601Melon (DHL92) v3.5.1cmomeB449
CmoCh19G004920MELO3C018055Melon (DHL92) v3.5.1cmomeB475
CmoCh19G004920ClCG09G016000Watermelon (Charleston Gray)cmowcgB441
CmoCh19G004920ClCG10G009620Watermelon (Charleston Gray)cmowcgB454
CmoCh19G004920CSPI07G05940Wild cucumber (PI 183967)cmocpiB532
CmoCh19G004920CSPI04G11850Wild cucumber (PI 183967)cmocpiB515
CmoCh19G004920MELO3C018055.2Melon (DHL92) v3.6.1cmomedB550
CmoCh19G004920MELO3C018601.2Melon (DHL92) v3.6.1cmomedB518
CmoCh19G004920CsaV3_4G014770Cucumber (Chinese Long) v3cmocucB0612
CmoCh19G004920CsaV3_7G006940Cucumber (Chinese Long) v3cmocucB0630
CmoCh19G004920Cla97C10G192690Watermelon (97103) v2cmowmbB505
CmoCh19G004920Cla97C09G177810Watermelon (97103) v2cmowmbB531
CmoCh19G004920Bhi05G000779Wax gourdcmowgoB0660
CmoCh19G004920Bhi11G000867Wax gourdcmowgoB0635
CmoCh19G004920CsGy7G005640Cucumber (Gy14) v2cgybcmoB928
CmoCh19G004920Carg22814Silver-seed gourdcarcmoB0397
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G004920Cucurbita moschata (Rifu)cmocmoB110
CmoCh19G004920Cucurbita moschata (Rifu)cmocmoB395
CmoCh19G004920Cucumber (Gy14) v1cgycmoB0630
CmoCh19G004920Cucurbita maxima (Rimu)cmacmoB143
CmoCh19G004920Wild cucumber (PI 183967)cmocpiB525
CmoCh19G004920Cucumber (Chinese Long) v2cmocuB519
CmoCh19G004920Cucumber (Chinese Long) v2cmocuB526
CmoCh19G004920Melon (DHL92) v3.5.1cmomeB454
CmoCh19G004920Watermelon (97103) v1cmowmB478
CmoCh19G004920Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G004920Cucurbita pepo (Zucchini)cmocpeB488
CmoCh19G004920Cucurbita pepo (Zucchini)cmocpeB494
CmoCh19G004920Bottle gourd (USVL1VR-Ls)cmolsiB467
CmoCh19G004920Bottle gourd (USVL1VR-Ls)cmolsiB468
CmoCh19G004920Cucumber (Gy14) v2cgybcmoB933
CmoCh19G004920Melon (DHL92) v3.6.1cmomedB523
CmoCh19G004920Silver-seed gourdcarcmoB0513
CmoCh19G004920Cucumber (Chinese Long) v3cmocucB0623
CmoCh19G004920Wax gourdcmowgoB0642