CmoCh19G004840 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G004840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pentatricopeptide repeat-containing protein, putative
Location	Cmo_Chr19 : 5779726 .. 5784368 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTACAAACTCGTGGCGGATTCGATAATCAGCTAAACGGAGATTGGGTCACCAAGCGAAGGATCCATTTCCATGGCTTCTCGCTCTCTCTTCCTCTCCTTAAATCGGTAAGTATGGCTGTTCTTAATTTCATTGCAATTTTGTTCTTTCTTCGTTATTTGAGGATTTGTGTAAATCGATCTGAACCCTAGAAAATTCAGGAATAGAGGCTTCTTAAATCAAAGTTTCAAAGCGATCCTGGTCTTCAATGAAGCCAGTGTTTCGAACTATTGCTCTCATGGAGCACTGAGGAGTGAATCTCTTGATGAATCAGTGAATTCTGAAGAAACCAATGACTTGAAGAGCAGAATATTTCGGCTCAGACTTCCCAAGCGAAGTGCTATCAACGTTATTCAGAGATGGACGAGTGAGGGCAATCAAGTTACGATCACTGAGCTCCGGAACATCTCCAAAGAACTCAGAAGGCTTCAGCGGTATAAGCACGCTCTTGAGGTAATGTTTTATCTGTTTTCTTCTTGCTTCTTACAGTATTTATCAGATGATCAATGACAGTTATAAAATGAAAGAGAATTTTTTTCTGTGGTTCTTTGATGGATAATTGTAACTCTGGAAAACAGAATTTTCTAAATTTTTTCTTTGGAGTCGATCATTTATTTTATACATGCTTGGATATGGATAAGATATCAATTTTTTATCTGCATCCAGTTGGTTTGTTTGATTTGTGCTCGAGCCTCCATTTGAAAAATTTGTAGAAAATGTCACCTAATCCGTAGGTGGAGACGAATTATGGTAATTTGTTTCGATCCGAGATGTAAACAAAGACAAGGATAATCCTTATTAAAAAAGGACTAGTGTTGTTGCGGTAACTCTCAATGAAATCAAATCAAATGTGCAGCCCTATGTAAATGAACACGAATATAAGTGTAAGCTGTCTTCGTAAAATTGAACTTATGTACTCGTCATCTGTATAAACGCTGTTGAGGAAGTTTGTATCTGTAATTCTTAGCTATAGTATAGTGTAGTTAGTTAAGTCTCCTAGAGTGAAGTATACTCTCTAACCTTATTTTTAATATTAAAACAAGAAGATTTGTATGTCTACGAACCAGAATGTTTGCGCCTTCCAATCAAACATTTGGAGTTTGATACAAGCTATACAAATACTCATATAATTTGCACAAGCACCCTTTGTTAGGTGGTTCTTTTGTCTCAAAAGCTTTAGCCTTCAGTGTTGTCCTAAGACAACTAAAGATGTCTTGAAATAGGTCGTGCACGGAAGTTCTTTTAGCGAATAGGAAGAAAGAAAGAAAGGAAAGGACTATTGTGAGATCCCTCATCGATTGGAGAGGGGAACGAGTGCCAGCGGGATGCTGGGCCCCAAGGGGGTGGAGCGTAAGGTCCCACACGGTTGGGGAGGAAAACAAAACGTTCTTTATAAAGATGTGGAAACCTCTCTCTAGCAGACGCGTTTTAATACCGTGAGGCTGACAACGATATGTGACGGACCGAAGCGGATAATATCTGCCAATGGTGGGCTTAGGCTGTTACAAATGGTATCAGAGCTAGGCACTGAGTGGTAAGCCAACGAGGACGCTGAGCCCCGAAGCGATCTCATAATCGATGTGGGATTATGAGATCTCACATCGATTGGAGCGGGGAACGAGTGCCAGCGAGGACGCTAGGTCCCAAAAGGGGTGGAGGGGGAGGGGTGGATTGTGAGATCCCACATCGATTGAAGAGGGGGACGAGTGTCAGTGAGGACGCTGGGCCCCGAAGGGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGGGGGACGAGTGTCAGTGAGGACGCTGGGCCCCGAAGGGGGTGGATTGTGAGATCCCCCATCGATTGGAGAGGGGGACGAGTGCCAATGAGGACGTTAGTCCCCAAAGGGGGTGGATTGTGAGGTCCCACATCGATTTGAGAGGGGAGCAAAAAACTTTTTATAAGGTGTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAATTTTGAGGGGAAACCTGGAAGGGAAAGCCCGAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTATTACAGTTTTTCGGACCAATGCTTTGTTAAAAATGGCTATTTTGGGAAACGAGTGCCAGTGAGGACACTGGGCCCTGAAGGGGGTGGAGTGTGAGATCTCACATCGGTTGGAGAAGAGAAGGAAACTTTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAATCTCGAGGGAAAGCCCAAAAAGGACAATATTTGCTAACGGTGGACTTGGGCCATTACAATTTCTAGACAAATTACAAATTACTGGGACCATAGTTAATTGGAGTAGACCATTGTGTTGATAGGCCTTGATATTTGCAGCAGTAAGTCTTAGTCTCAAAGTGATATGGCCCATATCTTGCCCTGCCGAAATACCACTCTCAATCTTGCCCTTTATGCCACATATAGAGGAGAGAAATTCCACAACTGATATACTCAACAAATGTTTTGTAATGAGATAAATGCAAAAAGTATATTTATGGTCAATATGAGAAATAGAAAGTTGTAGCTCAGACTGTGAGAGTTCCTGTAATAGCCCAAGCCCACTCTTAACCGATATTGCCCTCTTTGGACTTTCTCTTTCAAGCTTCCCCTCAAGGTTTTCAAAACGCGTCTATTAGAGAGAGGTTTCCACACCCTTATAAAGAATGCTTTGTTCTCCTCCCCAACTAGTGTGGGATCTCACAATCCATCCCCCTTCGGGACCCAGCATTCTCGCTAGCACTCGTTCCCTTCTCCAATCGATGTGGTACCCCTCAATCCACCCCTTTTGGGTCCTAGCGTCCTTGCTGGCACACCGCCTTGTGTCCACCCCCTTTTGGTGCTCAGCTTCCTCACTGGCACATCGCCAAGTCTCTAGCTCTAATACCATGTGGAATGCCCCAAGCTCACTGCTAACAGATATTGTCCTCTTTGGGCTTCCCCTCAAGGTTTTTAAAACACGTCTGCTAGGGAGAAATTTCCACACTCTTATAAAGAATGTTCTTATGTAGAGTCTTCCTTAATCCTTCGATCCTTCGAGAACATAGCTCACAGATTCCAAAAGTTCAATTACATGGTTCAAGAATTTCATTGAATGTTCCTTTAAAGCATACACGGCTGCATAAAATTACTAATGATATAATTATATGCTCATACTCAAGAATAAGGGTTCAAGTTGCATTGTACTACTACAAGTGAAATTGAATTTTATGTCTGCTAAAATCTTCCTTATTTCTCATTTGTGAAAAGGGTAAGAAAATGGTTAGAAGAACACCGTCATTTTCTTTGGCTCATAATCTGTAGAACACTGATCAGGGGCTTTTATGCCATCTTCTCTATTTACAATGAACTGACAATCTGTTTACCATACTTGCCTGCAGATTTTAGAATGGATGGTGTCTCATAATGAAAACGAGTTATCCGATTCTGACTTTGCAATCCGCATTGACTTGATGACGAAAGTTTTCGGTATCGATGCTGCTGAACGATACTTTGAAGGTCTGCCAATCAACGCCAAAACTTGTGAGACTTATACTGCTCTCCTTCACTCATTTGCGGGGTCCAAATTGACTGAAAAGGCAGAAACTCTTTATGAAAAAATGAAGGAGTCAGGTATACCTCTCACTGCCCTTCCATTCAATGAGATGATGACTTTATACACATCGGTCGGTCAAGTAGAAAAGGTATCCTCGATTGTCGACGACCTGAAACAAAGCAAGGTTCATCCTGACATTTTCACGTATAATCTTTGGATCAGCTCTCTAGCTGCAACATTAAATATCGATGGCGTTAGACGGATTCTCGATGAGATGAATCGCAACCCCAATTCAAATGAAGTCTGGGTGCGATATATCAATCTCGTCAACATATACATTACATCAGCTCATCTACTGCATTCCGAGTCAAACTCCGTAGTCGAGTCTGAGAGTGGCATTACGCAACGAGAATGGATTACATACGACCTCCTCATTATCTTGTATGCTGGTATGGGAAACAAAGACAAAATTGATCAGATTTGGAGATCATTAAGGATGACAAGGCAAAAAATGACGAGCAGAAACTACATTTGCATTCTATCTTGTTACCTGATGCTTGATCACTTGAAGGAAATTGGTGAAGTTATTGATCAATGGAAACAATCAAGTAGTGGAGATTTTGATGTTTCTGCTTGTAACAGGCTTGTAAATGCGTTTGTTGAAGCTGGTTTCAAGGAGAAAGGCAACAGTTTTGTCACCATTTTGAAGAACTGTGAACCCACAGAAGCATAGCGGTAGGTTTAAATCTTAACTTAGTCTTATCTTGTTTTGATTCATCAGGTTACAAATGTTGTCTCCTAATGCTCTGAATTTTGAGTAAAAGATATTGCTTCTGTCATTATTATTTTGTTTTCACATTTTACTTGCGGGACCTGCCCGAATGGGCGGGGGATTCTCCGTTTAGATGGGAAATGGGAAGGGAGTGGAGAACATTTTTTCTTTGTTAGATAAAGGGGGCTGGGGACGGGATGGGACGAGATTATATTCCTTGTCTCTCTGCCCAATTTCTTGCTCCACCGTGTTTAATATAAATACTAAGCAATTTCCCGCTCTGCCCAA

mRNA sequence

CTACAAACTCGTGGCGGATTCGATAATCAGCTAAACGGAGATTGGGTCACCAAGCGAAGGATCCATTTCCATGGCTTCTCGCTCTCTCTTCCTCTCCTTAAATCGGAATAGAGGCTTCTTAAATCAAAGTTTCAAAGCGATCCTGGTCTTCAATGAAGCCAGTGTTTCGAACTATTGCTCTCATGGAGCACTGAGGAGTGAATCTCTTGATGAATCAGTGAATTCTGAAGAAACCAATGACTTGAAGAGCAGAATATTTCGGCTCAGACTTCCCAAGCGAAGTGCTATCAACGTTATTCAGAGATGGACGAGTGAGGGCAATCAAGTTACGATCACTGAGCTCCGGAACATCTCCAAAGAACTCAGAAGGCTTCAGCGGTATAAGCACGCTCTTGAGATTTTAGAATGGATGGTGTCTCATAATGAAAACGAGTTATCCGATTCTGACTTTGCAATCCGCATTGACTTGATGACGAAAGTTTTCGGTATCGATGCTGCTGAACGATACTTTGAAGGTCTGCCAATCAACGCCAAAACTTGTGAGACTTATACTGCTCTCCTTCACTCATTTGCGGGGTCCAAATTGACTGAAAAGGCAGAAACTCTTTATGAAAAAATGAAGGAGTCAGGTATACCTCTCACTGCCCTTCCATTCAATGAGATGATGACTTTATACACATCGGTCGGTCAAGTAGAAAAGGTATCCTCGATTGTCGACGACCTGAAACAAAGCAAGGTTCATCCTGACATTTTCACGTATAATCTTTGGATCAGCTCTCTAGCTGCAACATTAAATATCGATGGCGTTAGACGGATTCTCGATGAGATGAATCGCAACCCCAATTCAAATGAAGTCTGGGTGCGATATATCAATCTCGTCAACATATACATTACATCAGCTCATCTACTGCATTCCGAGTCAAACTCCGTAGTCGAGTCTGAGAGTGGCATTACGCAACGAGAATGGATTACATACGACCTCCTCATTATCTTGTATGCTGGTATGGGAAACAAAGACAAAATTGATCAGATTTGGAGATCATTAAGGATGACAAGGCAAAAAATGACGAGCAGAAACTACATTTGCATTCTATCTTGTTACCTGATGCTTGATCACTTGAAGGAAATTGGTGAAGTTATTGATCAATGGAAACAATCAAGTAGTGGAGATTTTGATGTTTCTGCTTGTAACAGGCTTGTAAATGCGTTTGTTGAAGCTGGTTTCAAGGAGAAAGGCAACAGTTTTGTCACCATTTTGAAGAACTGTGAACCCACAGAAGCATAGCGGTAGGTTTAAATCTTAACTTAGTCTTATCTTGTTTTGATTCATCAGGTTACAAATGTTGTCTCCTAATGCTCTGAATTTTGAGTAAAAGATATTGCTTCTGTCATTATTATTTTGTTTTCACATTTTACTTGCGGGACCTGCCCGAATGGGCGGGGGATTCTCCGTTTAGATGGGAAATGGGAAGGGAGTGGAGAACATTTTTTCTTTGTTAGATAAAGGGGGCTGGGGACGGGATGGGACGAGATTATATTCCTTGTCTCTCTGCCCAATTTCTTGCTCCACCGTGTTTAATATAAATACTAAGCAATTTCCCGCTCTGCCCAA

Coding sequence (CDS)

ATGGCTTCTCGCTCTCTCTTCCTCTCCTTAAATCGGAATAGAGGCTTCTTAAATCAAAGTTTCAAAGCGATCCTGGTCTTCAATGAAGCCAGTGTTTCGAACTATTGCTCTCATGGAGCACTGAGGAGTGAATCTCTTGATGAATCAGTGAATTCTGAAGAAACCAATGACTTGAAGAGCAGAATATTTCGGCTCAGACTTCCCAAGCGAAGTGCTATCAACGTTATTCAGAGATGGACGAGTGAGGGCAATCAAGTTACGATCACTGAGCTCCGGAACATCTCCAAAGAACTCAGAAGGCTTCAGCGGTATAAGCACGCTCTTGAGATTTTAGAATGGATGGTGTCTCATAATGAAAACGAGTTATCCGATTCTGACTTTGCAATCCGCATTGACTTGATGACGAAAGTTTTCGGTATCGATGCTGCTGAACGATACTTTGAAGGTCTGCCAATCAACGCCAAAACTTGTGAGACTTATACTGCTCTCCTTCACTCATTTGCGGGGTCCAAATTGACTGAAAAGGCAGAAACTCTTTATGAAAAAATGAAGGAGTCAGGTATACCTCTCACTGCCCTTCCATTCAATGAGATGATGACTTTATACACATCGGTCGGTCAAGTAGAAAAGGTATCCTCGATTGTCGACGACCTGAAACAAAGCAAGGTTCATCCTGACATTTTCACGTATAATCTTTGGATCAGCTCTCTAGCTGCAACATTAAATATCGATGGCGTTAGACGGATTCTCGATGAGATGAATCGCAACCCCAATTCAAATGAAGTCTGGGTGCGATATATCAATCTCGTCAACATATACATTACATCAGCTCATCTACTGCATTCCGAGTCAAACTCCGTAGTCGAGTCTGAGAGTGGCATTACGCAACGAGAATGGATTACATACGACCTCCTCATTATCTTGTATGCTGGTATGGGAAACAAAGACAAAATTGATCAGATTTGGAGATCATTAAGGATGACAAGGCAAAAAATGACGAGCAGAAACTACATTTGCATTCTATCTTGTTACCTGATGCTTGATCACTTGAAGGAAATTGGTGAAGTTATTGATCAATGGAAACAATCAAGTAGTGGAGATTTTGATGTTTCTGCTTGTAACAGGCTTGTAAATGCGTTTGTTGAAGCTGGTTTCAAGGAGAAAGGCAACAGTTTTGTCACCATTTTGAAGAACTGTGAACCCACAGAAGCATAG

Homology

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BLAST of CmoCh19G004840 vs. Swiss-Prot
Match: PP372_ARATH (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana GN=At5g09450 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 3.6e-123
Identity = 230/400 (57.50%), Postives = 300/400 (75.00%), Query Frame = 1


Query: 1   MASRSLFLSLN---RNRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETND 60
           MA+RSLF SL     N G L  +F      +  S S Y +  A+ +  ++ES   EE +D
Sbjct: 1   MATRSLFHSLRCRLTNNGVLGSNFIRNAESSRFSKS-YNADAAIGNSLVEES---EEKDD 60

Query: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120
           LKSRIFRLRLPKRSA  V+++W  EGNQ+TI ELR ISKELRR +RYKHALE+ EWMV H
Sbjct: 61  LKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH 120

Query: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 180
            E+++SD+D+A RIDL++KVFGIDAAERYFEGL I++KT ETYT+LLH++A SK TE+AE
Sbjct: 121 EESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAE 180

Query: 181 TLYEKMKES-GIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISS 240
            L++++ ES  +   A+ +NEMMTLY SVGQVEKV  +++ LKQ KV PDIFTYNLW+SS
Sbjct: 181 ALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSS 240

Query: 241 LAATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQ 300
            AAT NID +R+IL+EM  + +SNE WVRYI+L +IYI S+ + ++ES   VE+E  I+Q
Sbjct: 241 CAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQ 300

Query: 301 REWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEV 360
           REWITYD L+IL+ G+GNK  IDQIW+SLR T Q ++SR+YIC+LS YLML HL+E  E+
Sbjct: 301 REWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEI 360

Query: 361 IDQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL 397
           I QWK+S + +FD SAC R++NAF + G +   + F  IL
Sbjct: 361 IHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLIL 396

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BLAST of CmoCh19G004840 vs. Swiss-Prot
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.2e-55
Identity = 116/339 (34.22%), Postives = 202/339 (59.59%), Query Frame = 1


Query: 48  ESVNSEET-----NDLKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQ 107
           ES N +ET     + L  R+  L   KRSA+  I++W  EG+ V   EL  I +ELR+++
Sbjct: 48  ESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIK 107

Query: 108 RYKHALEILEWMVSHNENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTA 167
           RYKHALEI EWMV   + +L   D+A+ +DL++K+ G+++AE++FE +P   +     T+
Sbjct: 108 RYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTS 167

Query: 168 LLHSFAGSKLTEKAETLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSK 227
           LLHS+  +KL++KAE L+EKM E G   + LP+N M+++Y S GQ EKV  ++ +LK  +
Sbjct: 168 LLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-IR 227

Query: 228 VHPDIFTYNLWISSLAATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHS 287
             PDI TYNLW+++ A+  +++G  ++  +  +    N  WV Y  L N+Y  + + +  
Sbjct: 228 TSPDIVTYNLWLTAFASGNDVEGAEKVYLKA-KEEKLNPDWVTYSVLTNLYAKTDN-VEK 287

Query: 288 ESNSVVESESGITQREWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILS 347
              ++ E E  ++++  + Y  LI L+A +G+KD ++  W+ ++ + +KM    Y+ ++S
Sbjct: 288 ARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMIS 347

Query: 348 CYLMLDHLKEIGEVIDQWKQSSSGDFDVSACNRLVNAFV 382
             + L   ++   + D+W +S SG  D    N ++  ++
Sbjct: 348 AVVKLGEFEQAKGLYDEW-ESVSGTGDARIPNLILAEYM 382

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BLAST of CmoCh19G004840 vs. Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-48
Identity = 106/340 (31.18%), Postives = 183/340 (53.82%), Query Frame = 1


Query: 58  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 117
           L+ R+ R   P  S I V+  W  +GN V  +EL +I K LR+  R+ HAL+I +WM  H
Sbjct: 40  LQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEH 99

Query: 118 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 177
             +E+S+ D AIR+DL+ KV G+  AE++FE +P+  +    Y ALL+ +A  K+  KAE
Sbjct: 100 RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 159

Query: 178 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSL 237
            ++++MKE G     LP+N M+ LY   G+   V  ++ +++   V PDIFT N  + + 
Sbjct: 160 QVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAY 219

Query: 238 AATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGI-TQ 297
           +   +++G+ + L     +   +  W  Y +  N YI  A L       + +SE  +  Q
Sbjct: 220 SVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYI-KAGLTEKALEMLRKSEQMVNAQ 279

Query: 298 REWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEV 357
           +    Y++L+  Y   G K+++ ++W SL        +  YI ++S  L +D ++E+ ++
Sbjct: 280 KRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKI 339

Query: 358 IDQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL 397
           +++W+   S  FD+   + L+  + + G  EK    V IL
Sbjct: 340 MEEWEAGHS-LFDIRIPHLLITGYCKKGMMEKAEEVVNIL 376

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BLAST of CmoCh19G004840 vs. Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 6.5e-48
Identity = 110/301 (36.54%), Postives = 171/301 (56.81%), Query Frame = 1


Query: 90  ELRNISKELRRLQRYKHALEILEWMVSHNENELSDSDFAIRIDLMTKVFGIDAAERYFEG 149
           E+ +  K+LR    Y  AL++ E M     N+ + SD AI +DL+ K   I A E YF  
Sbjct: 57  EVGDTIKKLRNRGLYYPALKLSEVMEERGMNK-TVSDQAIHLDLVAKAREITAGENYFVD 116

Query: 150 LPINAKTCETYTALLHSFAGSKLTEKAETLYEKMKESGIPLTALPFNEMMTLYTSVGQVE 209
           LP  +KT  TY +LL+ +    LTEKAE L  KMKE  I  +++ +N +MTLYT  G+ E
Sbjct: 117 LPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETE 176

Query: 210 KVSSIVDDLKQSKVHPDIFTYNLWISSLAATLNIDGVRRILDEMNRNPNSNEVWVRYINL 269
           KV +++ +LK   V PD +TYN+W+ +LAAT +I GV R+++EMNR+      W  Y N+
Sbjct: 177 KVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNM 236

Query: 270 VNIYITSAHLLHSESNSVVESESGITQREWITYDLLIILYAGMGNKDKIDQIWRSLRMTR 329
            +IY+  A L      ++ E E   TQR++  Y  LI LY  +G   ++ +IWRSLR+  
Sbjct: 237 ASIYV-DAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAI 296

Query: 330 QKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSSSGDFDVSACNRLVNAFVEAGFKEKG 389
            K ++  Y+ ++   + L+ L     +  +W Q++   +D+   N L+ A+ + G  +K 
Sbjct: 297 PKTSNVAYLNMIQVLVKLNDLPGAETLFKEW-QANCSTYDIRIVNVLIGAYAQEGLIQKA 354

Query: 390 N 391
           N
Sbjct: 357 N 354

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BLAST of CmoCh19G004840 vs. Swiss-Prot
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.1e-46
Identity = 112/341 (32.84%), Postives = 184/341 (53.96%), Query Frame = 1


Query: 56  NDLKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMV 115
           N LK  I R   P+RS  +++Q     G+ V+++ELR ISK L R  RY  AL+++EWM 
Sbjct: 39  NSLKE-ILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWME 98

Query: 116 SHNENELSDSDFAIRIDLMTKVFGIDAAERYFEGL---PINAKTCET-YTALLHSFAGSK 175
           +  + E S  D A+R+DL+ K  G+   E YFE L    ++ +  ++ Y  LL ++  +K
Sbjct: 99  NQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNK 158

Query: 176 LTEKAETLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYN 235
           + ++AE L EK+   G  +T  PFNEMM LY + GQ EKV  +V  +K +K+  ++ +YN
Sbjct: 159 MVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYN 218

Query: 236 LWISSLAATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVE-S 295
           LW+++      +  V  +  EM  + +    W     L N+YI S      ++  V+E +
Sbjct: 219 LWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSG--FDEKARLVLEDA 278

Query: 296 ESGITQREWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHL 355
           E  + +   + Y  LI LYA +GNK+ + ++W   +    +++  NYIC+LS  +    L
Sbjct: 279 EKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDL 338

Query: 356 KEIGEVIDQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNS 392
           +E   V  +W ++   ++DV   N L+ A+V  G   K  S
Sbjct: 339 EEAERVFSEW-EAQCFNYDVRVSNVLLGAYVRNGEIRKAES 375

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BLAST of CmoCh19G004840 vs. TrEMBL
Match: A0A0A0K649_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066290 PE=4 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 3.1e-198
Identity = 350/409 (85.57%), Postives = 381/409 (93.15%), Query Frame = 1


Query: 1   MASRSLFLSLNR---NRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETND 60
           MASR+LFL+ +R   NRGFLNQSFK+  VFNEA+VSNYCSHGALRSES DESVN EE ND
Sbjct: 1   MASRALFLAFSRKFRNRGFLNQSFKSTPVFNEANVSNYCSHGALRSESFDESVNYEEFND 60

Query: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120
           LKSRIF+LRLPKRSAI V++RWTSEGNQVTI ELRNISKELR++QRYKHALEILEWMVSH
Sbjct: 61  LKSRIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSH 120

Query: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 180
           N++ELSDSDFAIRIDLMTKVFG+DAAERYFEGLPI+AKTCETYTALLHSFAGSKLT+KAE
Sbjct: 121 NQSELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 180

Query: 181 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSL 240
           TLYEKMKES IPLTALPFNEMMTLYTS+GQVEKVSSIVDDLKQ  VHPDIFTYNLWISSL
Sbjct: 181 TLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240

Query: 241 AATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQR 300
           AA LNIDGV++IL+EMN NPNSNE WVRYI LVNIY+ SA+LLHSESNSVVES SGI+QR
Sbjct: 241 AAALNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQR 300

Query: 301 EWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYDLLIILYAG+GNKDKIDQIWRSLRMT+QKMTSRNYICI+SCYLMLD LKEIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 360

Query: 361 DQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 405
           DQWKQS++ DFD+S+CNRLVNAF+EAG  EK NSFV +L  KNCEPTEA
Sbjct: 361 DQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEPTEA 409

[Close]

BLAST of CmoCh19G004840 vs. TrEMBL
Match: A0A067DHG1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015370mg PE=4 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 5.7e-144
Identity = 263/409 (64.30%), Postives = 324/409 (79.22%), Query Frame = 1


Query: 1   MASRSLFLSLNR--NRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESV-NSEETND 60
           MA+RS FL L R  N    N+       F     S + S G+ ++E LDE   NS+  +D
Sbjct: 1   MAARSFFLGLRRASNTKIKNRPNSDYECF---FYSRFLSSGSSQNECLDEETSNSDGKDD 60

Query: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120
           LKSRIFR+ LPKRSA NVIQRW SEGNQ T++ELR+I KELR+ QRYKHALEI EWMV+H
Sbjct: 61  LKSRIFRISLPKRSATNVIQRWVSEGNQATVSELRHILKELRKSQRYKHALEISEWMVTH 120

Query: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 180
            E  LSDSD+A RIDLMTKVFGI + ERYFEGLP++AKT ETYTALLH +AG+K TEKAE
Sbjct: 121 KEFVLSDSDYATRIDLMTKVFGIHSGERYFEGLPLSAKTSETYTALLHLYAGAKWTEKAE 180

Query: 181 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSL 240
            L+E++K+S +   AL +NEMMTLY SVGQVEKV+ +V+++K+  V PDIFTYNLWISS 
Sbjct: 181 ELFERVKQSNLSFNALMYNEMMTLYMSVGQVEKVALVVEEIKRKNVVPDIFTYNLWISSC 240

Query: 241 AATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQR 300
           AATLNID V++ LDEM+ +   ++ WV+Y+NLVNIYIT++HL+++ES+++VE+E  ITQR
Sbjct: 241 AATLNIDQVKKFLDEMSCDSGGSDDWVKYVNLVNIYITASHLVNAESSTLVEAEKSITQR 300

Query: 301 EWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           +WITYD LIILYAG+GNKDKIDQIW+SLRMT+QKMTSRNYICILS YLML HLKE+GE+I
Sbjct: 301 QWITYDFLIILYAGLGNKDKIDQIWKSLRMTKQKMTSRNYICILSSYLMLGHLKEVGEII 360

Query: 361 DQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 405
           DQWKQS++ DFD+SACNRL+ AF + G  EK N F  +L  KNC PT A
Sbjct: 361 DQWKQSATSDFDISACNRLLGAFSDVGLTEKANEFHMLLLQKNCAPTNA 406

[Close]

BLAST of CmoCh19G004840 vs. TrEMBL
Match: A0A072VEC1_MEDTR (PPR containing plant protein OS=Medicago truncatula GN=MTR_1g022400 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 2.7e-141
Identity = 259/406 (63.79%), Postives = 319/406 (78.57%), Query Frame = 1


Query: 1   MASRSLFLSL--NRNRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEE-TND 60
           M+ RSLFLSL   RN G ++ ++      N  S   + S+ A+ S+ ++E+ NS E  +D
Sbjct: 1   MSYRSLFLSLIKRRNTGLISNNYH----HNHRSARFFTSN-AVTSDYVEETPNSSEGDDD 60

Query: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120
           L+SRI RLRLPKRSA NV+Q+W  +GN + ++ELR+ISKELR  QRYKHALEI EWMVSH
Sbjct: 61  LRSRILRLRLPKRSATNVLQKWVLQGNSIPVSELRDISKELRTSQRYKHALEISEWMVSH 120

Query: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 180
            E ELSDSD+A RIDLM KVFGIDAAERYFE LP++AKTCETYTALLHS+AG+K+TEKAE
Sbjct: 121 EEYELSDSDYADRIDLMNKVFGIDAAERYFEALPLSAKTCETYTALLHSYAGAKMTEKAE 180

Query: 181 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSL 240
            LYE++K+S +P  A+ +NEMMTLY SVGQVEK+ S+V+DLKQ KV PDIFT+NLWISS 
Sbjct: 181 ELYERIKDSNLPFDAVTYNEMMTLYMSVGQVEKIPSVVEDLKQQKVVPDIFTFNLWISSC 240

Query: 241 AATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQR 300
           AA+LNID VRRIL+EM     S+E W+RY+NL N+Y T+ HL  + SNS+VE+E GITQ 
Sbjct: 241 AASLNIDEVRRILEEMRNGAGSDESWIRYLNLANVYFTAGHLDSASSNSLVETEKGITQS 300

Query: 301 EWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           +WITYDLL+ILYAG+GNKDK+DQIW SLRMT+QKM SRNYICI+S YL+LDH KE GEVI
Sbjct: 301 QWITYDLLVILYAGLGNKDKLDQIWNSLRMTKQKMISRNYICIISAYLILDHAKEAGEVI 360

Query: 361 DQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEP 402
           DQWKQS++ DFDV  C R+++AF E G  E  N+   IL  KN  P
Sbjct: 361 DQWKQSTTTDFDVLDCKRIMDAFTEIGLDEVANNLNMILIEKNLNP 401

[Close]

BLAST of CmoCh19G004840 vs. TrEMBL
Match: A0A0D2TVY9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G057100 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 1.0e-140
Identity = 254/404 (62.87%), Postives = 321/404 (79.46%), Query Frame = 1


Query: 1   MASRSLFLSLNRNRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETNDLKS 60
           MASRSLFLSL R               ++  +S   S G++ +E  D+ +N+ ET+DL+S
Sbjct: 1   MASRSLFLSLRRRS-------------SQRCMSRLLSSGSVSTEYTDDYINNSETDDLRS 60

Query: 61  RIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSHNEN 120
           RIFRLRLPKRSA +VI++W  EGN+++I++LR ISK+LR+ QR+KHALEI EWMVSH E 
Sbjct: 61  RIFRLRLPKRSATSVIEKWVGEGNRISISDLRQISKDLRKSQRFKHALEISEWMVSHEEY 120

Query: 121 ELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAETLY 180
           +LSD+D+AIRIDLMTKVFGIDAAERYFE LP+ AKT ETYTALLHS+A +KLTEKAE LY
Sbjct: 121 KLSDTDYAIRIDLMTKVFGIDAAERYFEDLPLTAKTSETYTALLHSYAAAKLTEKAEELY 180

Query: 181 EKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSLAAT 240
           E++K S +  +AL +NE+MTLY SVGQVEKVSS+V++LK+ KV PDIFTYNLWISS AA 
Sbjct: 181 ERIKGSKLSFSALLYNEIMTLYMSVGQVEKVSSVVEELKRQKVEPDIFTYNLWISSCAAA 240

Query: 241 LNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQREWI 300
           LNID V+RIL+EM  +   N+ W RYINLVNIY+T++ L  ++S S +E E GITQREWI
Sbjct: 241 LNIDQVQRILNEMRCDSGCNDDWQRYINLVNIYVTASRLTSADSISPIEIEKGITQREWI 300

Query: 301 TYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVIDQW 360
           TYD L++LYAG+G+KDKIDQIW+SLRMT+QKMTSRNYICILS YL+L H+KE+GEV +QW
Sbjct: 301 TYDFLVMLYAGLGDKDKIDQIWKSLRMTKQKMTSRNYICILSSYLILGHMKEVGEVFNQW 360

Query: 361 KQSSSGDFDVSACNRLVNAFVEAGFKEKGNS--FVTILKNCEPT 403
           KQS++ +FD+SACN +++AF +AG  EK N    + I  NC PT
Sbjct: 361 KQSTTTEFDISACNSVLSAFEDAGLMEKANDLHMLLISGNCSPT 391

[Close]

BLAST of CmoCh19G004840 vs. TrEMBL
Match: A0A067KXR4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24946 PE=4 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 1.0e-140
Identity = 255/407 (62.65%), Postives = 325/407 (79.85%), Query Frame = 1


Query: 1   MASRSLFLSLNRNRGF-LNQSFKAILVFNEASVSNYCSHGALRSE-SLDES-VNSEETND 60
           MASRSL  +L R R   +N    ++    + +   + S  ALR++ +L+ES     + +D
Sbjct: 1   MASRSLLFTLQRRRKCRINSEIGSLYTLKKENFVRFVSSDALRNDVALEESNYKDNKEDD 60

Query: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120
           L+SRIFRLRLPKRSA N+IQ+W +EGN V ++ELR+ISKEL + QR+KHALEI EWMV+H
Sbjct: 61  LRSRIFRLRLPKRSATNIIQKWVNEGNTVALSELRSISKELSKSQRFKHALEISEWMVTH 120

Query: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 180
            EN LSDSD+A RIDLMTKVFGIDAAERYFEGLPI +KT ETYTALLHS+A SKL +KAE
Sbjct: 121 EENALSDSDYANRIDLMTKVFGIDAAERYFEGLPITSKTSETYTALLHSYARSKLLDKAE 180

Query: 181 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSL 240
            LYE++K S +  TAL +NEMMTLY SVGQ+EKVS +V +LK+ KV PDIFTYNLWISS 
Sbjct: 181 ELYERIKRSSLSFTALTYNEMMTLYMSVGQMEKVSLVVAELKRQKVAPDIFTYNLWISSC 240

Query: 241 AATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQR 300
           AATLN+D V RILDEM+R+ + N+ W+RYI++ NIY+ + HL+++ES++VV +E GITQR
Sbjct: 241 AATLNVDQVTRILDEMSRSSDCNDDWLRYIDIANIYVKAGHLVNAESSAVVAAEKGITQR 300

Query: 301 EWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYD LIILYAG+ NKDK+DQIW+SLRMT+Q+M +RN+ICILS YLML HLKE GEV+
Sbjct: 301 EWITYDFLIILYAGLRNKDKVDQIWKSLRMTKQRMINRNFICILSSYLMLGHLKEAGEVL 360

Query: 361 DQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPT 403
           DQWKQS++ +FD+SAC RL++ F+ AG  E GN+F  +L  +NC+PT
Sbjct: 361 DQWKQSTTTEFDISACGRLLDVFLGAGLTEVGNNFHMLLIERNCDPT 407

[Close]

BLAST of CmoCh19G004840 vs. TAIR10
Match: AT5G09450.1 (AT5G09450.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 443.0 bits (1138), Expect = 2.0e-124
Identity = 230/400 (57.50%), Postives = 300/400 (75.00%), Query Frame = 1


Query: 1   MASRSLFLSLN---RNRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETND 60
           MA+RSLF SL     N G L  +F      +  S S Y +  A+ +  ++ES   EE +D
Sbjct: 1   MATRSLFHSLRCRLTNNGVLGSNFIRNAESSRFSKS-YNADAAIGNSLVEES---EEKDD 60

Query: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120
           LKSRIFRLRLPKRSA  V+++W  EGNQ+TI ELR ISKELRR +RYKHALE+ EWMV H
Sbjct: 61  LKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH 120

Query: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 180
            E+++SD+D+A RIDL++KVFGIDAAERYFEGL I++KT ETYT+LLH++A SK TE+AE
Sbjct: 121 EESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAE 180

Query: 181 TLYEKMKES-GIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISS 240
            L++++ ES  +   A+ +NEMMTLY SVGQVEKV  +++ LKQ KV PDIFTYNLW+SS
Sbjct: 181 ALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSS 240

Query: 241 LAATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQ 300
            AAT NID +R+IL+EM  + +SNE WVRYI+L +IYI S+ + ++ES   VE+E  I+Q
Sbjct: 241 CAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQ 300

Query: 301 REWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEV 360
           REWITYD L+IL+ G+GNK  IDQIW+SLR T Q ++SR+YIC+LS YLML HL+E  E+
Sbjct: 301 REWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEI 360

Query: 361 IDQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL 397
           I QWK+S + +FD SAC R++NAF + G +   + F  IL
Sbjct: 361 IHQWKESKTTEFDASACLRILNAFRDVGLEGIASGFHLIL 396

[Close]

BLAST of CmoCh19G004840 vs. TAIR10
Match: AT4G02820.1 (AT4G02820.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 217.2 bits (552), Expect = 1.8e-56
Identity = 116/339 (34.22%), Postives = 202/339 (59.59%), Query Frame = 1


Query: 48  ESVNSEET-----NDLKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQ 107
           ES N +ET     + L  R+  L   KRSA+  I++W  EG+ V   EL  I +ELR+++
Sbjct: 48  ESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIK 107

Query: 108 RYKHALEILEWMVSHNENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTA 167
           RYKHALEI EWMV   + +L   D+A+ +DL++K+ G+++AE++FE +P   +     T+
Sbjct: 108 RYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTS 167

Query: 168 LLHSFAGSKLTEKAETLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSK 227
           LLHS+  +KL++KAE L+EKM E G   + LP+N M+++Y S GQ EKV  ++ +LK  +
Sbjct: 168 LLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-IR 227

Query: 228 VHPDIFTYNLWISSLAATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHS 287
             PDI TYNLW+++ A+  +++G  ++  +  +    N  WV Y  L N+Y  + + +  
Sbjct: 228 TSPDIVTYNLWLTAFASGNDVEGAEKVYLKA-KEEKLNPDWVTYSVLTNLYAKTDN-VEK 287

Query: 288 ESNSVVESESGITQREWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILS 347
              ++ E E  ++++  + Y  LI L+A +G+KD ++  W+ ++ + +KM    Y+ ++S
Sbjct: 288 ARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMIS 347

Query: 348 CYLMLDHLKEIGEVIDQWKQSSSGDFDVSACNRLVNAFV 382
             + L   ++   + D+W +S SG  D    N ++  ++
Sbjct: 348 AVVKLGEFEQAKGLYDEW-ESVSGTGDARIPNLILAEYM 382

[Close]

BLAST of CmoCh19G004840 vs. TAIR10
Match: AT2G20710.1 (AT2G20710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 195.3 bits (495), Expect = 7.3e-50
Identity = 106/340 (31.18%), Postives = 183/340 (53.82%), Query Frame = 1


Query: 58  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 117
           L+ R+ R   P  S I V+  W  +GN V  +EL +I K LR+  R+ HAL+I +WM  H
Sbjct: 40  LQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEH 99

Query: 118 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 177
             +E+S+ D AIR+DL+ KV G+  AE++FE +P+  +    Y ALL+ +A  K+  KAE
Sbjct: 100 RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 159

Query: 178 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSL 237
            ++++MKE G     LP+N M+ LY   G+   V  ++ +++   V PDIFT N  + + 
Sbjct: 160 QVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAY 219

Query: 238 AATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGI-TQ 297
           +   +++G+ + L     +   +  W  Y +  N YI  A L       + +SE  +  Q
Sbjct: 220 SVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYI-KAGLTEKALEMLRKSEQMVNAQ 279

Query: 298 REWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEV 357
           +    Y++L+  Y   G K+++ ++W SL        +  YI ++S  L +D ++E+ ++
Sbjct: 280 KRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKI 339

Query: 358 IDQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL 397
           +++W+   S  FD+   + L+  + + G  EK    V IL
Sbjct: 340 MEEWEAGHS-LFDIRIPHLLITGYCKKGMMEKAEEVVNIL 376

[Close]

BLAST of CmoCh19G004840 vs. TAIR10
Match: AT1G60770.1 (AT1G60770.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 193.0 bits (489), Expect = 3.6e-49
Identity = 110/301 (36.54%), Postives = 171/301 (56.81%), Query Frame = 1


Query: 90  ELRNISKELRRLQRYKHALEILEWMVSHNENELSDSDFAIRIDLMTKVFGIDAAERYFEG 149
           E+ +  K+LR    Y  AL++ E M     N+ + SD AI +DL+ K   I A E YF  
Sbjct: 57  EVGDTIKKLRNRGLYYPALKLSEVMEERGMNK-TVSDQAIHLDLVAKAREITAGENYFVD 116

Query: 150 LPINAKTCETYTALLHSFAGSKLTEKAETLYEKMKESGIPLTALPFNEMMTLYTSVGQVE 209
           LP  +KT  TY +LL+ +    LTEKAE L  KMKE  I  +++ +N +MTLYT  G+ E
Sbjct: 117 LPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETE 176

Query: 210 KVSSIVDDLKQSKVHPDIFTYNLWISSLAATLNIDGVRRILDEMNRNPNSNEVWVRYINL 269
           KV +++ +LK   V PD +TYN+W+ +LAAT +I GV R+++EMNR+      W  Y N+
Sbjct: 177 KVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNM 236

Query: 270 VNIYITSAHLLHSESNSVVESESGITQREWITYDLLIILYAGMGNKDKIDQIWRSLRMTR 329
            +IY+  A L      ++ E E   TQR++  Y  LI LY  +G   ++ +IWRSLR+  
Sbjct: 237 ASIYV-DAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAI 296

Query: 330 QKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSSSGDFDVSACNRLVNAFVEAGFKEKG 389
            K ++  Y+ ++   + L+ L     +  +W Q++   +D+   N L+ A+ + G  +K 
Sbjct: 297 PKTSNVAYLNMIQVLVKLNDLPGAETLFKEW-QANCSTYDIRIVNVLIGAYAQEGLIQKA 354

Query: 390 N 391
           N
Sbjct: 357 N 354

[Close]

BLAST of CmoCh19G004840 vs. TAIR10
Match: AT5G27460.1 (AT5G27460.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 186.4 bits (472), Expect = 3.4e-47
Identity = 112/341 (32.84%), Postives = 184/341 (53.96%), Query Frame = 1


Query: 56  NDLKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMV 115
           N LK  I R   P+RS  +++Q     G+ V+++ELR ISK L R  RY  AL+++EWM 
Sbjct: 39  NSLKE-ILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWME 98

Query: 116 SHNENELSDSDFAIRIDLMTKVFGIDAAERYFEGL---PINAKTCET-YTALLHSFAGSK 175
           +  + E S  D A+R+DL+ K  G+   E YFE L    ++ +  ++ Y  LL ++  +K
Sbjct: 99  NQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNK 158

Query: 176 LTEKAETLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYN 235
           + ++AE L EK+   G  +T  PFNEMM LY + GQ EKV  +V  +K +K+  ++ +YN
Sbjct: 159 MVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYN 218

Query: 236 LWISSLAATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVE-S 295
           LW+++      +  V  +  EM  + +    W     L N+YI S      ++  V+E +
Sbjct: 219 LWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSG--FDEKARLVLEDA 278

Query: 296 ESGITQREWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHL 355
           E  + +   + Y  LI LYA +GNK+ + ++W   +    +++  NYIC+LS  +    L
Sbjct: 279 EKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDL 338

Query: 356 KEIGEVIDQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNS 392
           +E   V  +W ++   ++DV   N L+ A+V  G   K  S
Sbjct: 339 EEAERVFSEW-EAQCFNYDVRVSNVLLGAYVRNGEIRKAES 375

[Close]

BLAST of CmoCh19G004840 vs. NCBI nr
Match: gi|449438238|ref|XP_004136896.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 704.5 bits (1817), Expect = 1.1e-199
Identity = 350/406 (86.21%), Postives = 381/406 (93.84%), Query Frame = 1


Query: 1   MASRSLFLSLNRNRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETNDLKS 60
           MASR+LFL+ +RNRGFLNQSFK+  VFNEA+VSNYCSHGALRSES DESVN EE NDLKS
Sbjct: 1   MASRALFLAFSRNRGFLNQSFKSTPVFNEANVSNYCSHGALRSESFDESVNYEEFNDLKS 60

Query: 61  RIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSHNEN 120
           RIF+LRLPKRSAI V++RWTSEGNQVTI ELRNISKELR++QRYKHALEILEWMVSHN++
Sbjct: 61  RIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSHNQS 120

Query: 121 ELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAETLY 180
           ELSDSDFAIRIDLMTKVFG+DAAERYFEGLPI+AKTCETYTALLHSFAGSKLT+KAETLY
Sbjct: 121 ELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLY 180

Query: 181 EKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSLAAT 240
           EKMKES IPLTALPFNEMMTLYTS+GQVEKVSSIVDDLKQ  VHPDIFTYNLWISSLAA 
Sbjct: 181 EKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAA 240

Query: 241 LNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQREWI 300
           LNIDGV++IL+EMN NPNSNE WVRYI LVNIY+ SA+LLHSESNSVVES SGI+QREWI
Sbjct: 241 LNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQREWI 300

Query: 301 TYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVIDQW 360
           TYDLLIILYAG+GNKDKIDQIWRSLRMT+QKMTSRNYICI+SCYLMLD LKEIGEVIDQW
Sbjct: 301 TYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVIDQW 360

Query: 361 KQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 405
           KQS++ DFD+S+CNRLVNAF+EAG  EK NSFV +L  KNCEPTEA
Sbjct: 361 KQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEPTEA 406

[Close]

BLAST of CmoCh19G004840 vs. NCBI nr
Match: gi|659110259|ref|XP_008455133.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 699.5 bits (1804), Expect = 3.4e-198
Identity = 346/406 (85.22%), Postives = 383/406 (94.33%), Query Frame = 1


Query: 1   MASRSLFLSLNRNRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETNDLKS 60
           MASR+LFL+ +RNRGFLNQSFK+I VFNEA++SNYCSHGALRSES D+SVNSEE NDLKS
Sbjct: 1   MASRTLFLAFSRNRGFLNQSFKSIPVFNEANISNYCSHGALRSESFDDSVNSEEFNDLKS 60

Query: 61  RIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSHNEN 120
           RIF+LRLPKRSAI V++RWTSEGNQVTITELRNISKELR++QRYKHALEILEWMV+HN++
Sbjct: 61  RIFQLRLPKRSAIRVLERWTSEGNQVTITELRNISKELRKIQRYKHALEILEWMVTHNKS 120

Query: 121 ELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAETLY 180
           +LSDSDFAIRIDLMTKVFG+DAAERYFEGLPI+AKTCETYTALLHSFAGSKLT+KAETLY
Sbjct: 121 DLSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLY 180

Query: 181 EKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSLAAT 240
           EK+KES IPLTALPFNEMMTLYTS+GQVEKVSSIVDDLKQ  VHPDIFTYNLWISSLAA 
Sbjct: 181 EKIKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLWISSLAAA 240

Query: 241 LNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQREWI 300
           LNIDGV++IL+EMN+NPNSNE WVRYI LVNIYI SA+LLHS SNSVVES SGI+QREWI
Sbjct: 241 LNIDGVKQILNEMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASGISQREWI 300

Query: 301 TYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVIDQW 360
           TYDLLIILYAG+GNKD+IDQIWRSLRMT+QKMTSRNYICI+SCYLMLD LKEIGEVIDQW
Sbjct: 301 TYDLLIILYAGLGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVIDQW 360

Query: 361 KQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 405
           KQS++ DFD+S+CNRLVNAFVEAG  EK NSFV +L  KNC+PT A
Sbjct: 361 KQSTTTDFDISSCNRLVNAFVEAGLNEKANSFVNVLIQKNCDPTVA 406

[Close]

BLAST of CmoCh19G004840 vs. NCBI nr
Match: gi|778724550|ref|XP_011658826.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 699.1 bits (1803), Expect = 4.4e-198
Identity = 350/409 (85.57%), Postives = 381/409 (93.15%), Query Frame = 1


Query: 1   MASRSLFLSLNR---NRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETND 60
           MASR+LFL+ +R   NRGFLNQSFK+  VFNEA+VSNYCSHGALRSES DESVN EE ND
Sbjct: 1   MASRALFLAFSRKFRNRGFLNQSFKSTPVFNEANVSNYCSHGALRSESFDESVNYEEFND 60

Query: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120
           LKSRIF+LRLPKRSAI V++RWTSEGNQVTI ELRNISKELR++QRYKHALEILEWMVSH
Sbjct: 61  LKSRIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSH 120

Query: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 180
           N++ELSDSDFAIRIDLMTKVFG+DAAERYFEGLPI+AKTCETYTALLHSFAGSKLT+KAE
Sbjct: 121 NQSELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 180

Query: 181 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSL 240
           TLYEKMKES IPLTALPFNEMMTLYTS+GQVEKVSSIVDDLKQ  VHPDIFTYNLWISSL
Sbjct: 181 TLYEKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 240

Query: 241 AATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQR 300
           AA LNIDGV++IL+EMN NPNSNE WVRYI LVNIY+ SA+LLHSESNSVVES SGI+QR
Sbjct: 241 AAALNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQR 300

Query: 301 EWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYDLLIILYAG+GNKDKIDQIWRSLRMT+QKMTSRNYICI+SCYLMLD LKEIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 360

Query: 361 DQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 405
           DQWKQS++ DFD+S+CNRLVNAF+EAG  EK NSFV +L  KNCEPTEA
Sbjct: 361 DQWKQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEPTEA 409

[Close]

BLAST of CmoCh19G004840 vs. NCBI nr
Match: gi|778724555|ref|XP_011658827.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X3 [Cucumis sativus])

HSP 1 Score: 695.3 bits (1793), Expect = 6.4e-197
Identity = 348/406 (85.71%), Postives = 379/406 (93.35%), Query Frame = 1


Query: 1   MASRSLFLSLNRNRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETNDLKS 60
           MASR+LFL+ +R  GFLNQSFK+  VFNEA+VSNYCSHGALRSES DESVN EE NDLKS
Sbjct: 1   MASRALFLAFSR--GFLNQSFKSTPVFNEANVSNYCSHGALRSESFDESVNYEEFNDLKS 60

Query: 61  RIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSHNEN 120
           RIF+LRLPKRSAI V++RWTSEGNQVTI ELRNISKELR++QRYKHALEILEWMVSHN++
Sbjct: 61  RIFQLRLPKRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSHNQS 120

Query: 121 ELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAETLY 180
           ELSDSDFAIRIDLMTKVFG+DAAERYFEGLPI+AKTCETYTALLHSFAGSKLT+KAETLY
Sbjct: 121 ELSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLY 180

Query: 181 EKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSLAAT 240
           EKMKES IPLTALPFNEMMTLYTS+GQVEKVSSIVDDLKQ  VHPDIFTYNLWISSLAA 
Sbjct: 181 EKMKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAA 240

Query: 241 LNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQREWI 300
           LNIDGV++IL+EMN NPNSNE WVRYI LVNIY+ SA+LLHSESNSVVES SGI+QREWI
Sbjct: 241 LNIDGVKQILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQREWI 300

Query: 301 TYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVIDQW 360
           TYDLLIILYAG+GNKDKIDQIWRSLRMT+QKMTSRNYICI+SCYLMLD LKEIGEVIDQW
Sbjct: 301 TYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVIDQW 360

Query: 361 KQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 405
           KQS++ DFD+S+CNRLVNAF+EAG  EK NSFV +L  KNCEPTEA
Sbjct: 361 KQSTTTDFDISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEPTEA 404

[Close]

BLAST of CmoCh19G004840 vs. NCBI nr
Match: gi|659110257|ref|XP_008455132.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 694.1 bits (1790), Expect = 1.4e-196
Identity = 346/409 (84.60%), Postives = 383/409 (93.64%), Query Frame = 1


Query: 1   MASRSLFLSLNR---NRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETND 60
           MASR+LFL+ +R   NRGFLNQSFK+I VFNEA++SNYCSHGALRSES D+SVNSEE ND
Sbjct: 1   MASRTLFLAFSRKFRNRGFLNQSFKSIPVFNEANISNYCSHGALRSESFDDSVNSEEFND 60

Query: 61  LKSRIFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSH 120
           LKSRIF+LRLPKRSAI V++RWTSEGNQVTITELRNISKELR++QRYKHALEILEWMV+H
Sbjct: 61  LKSRIFQLRLPKRSAIRVLERWTSEGNQVTITELRNISKELRKIQRYKHALEILEWMVTH 120

Query: 121 NENELSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAE 180
           N+++LSDSDFAIRIDLMTKVFG+DAAERYFEGLPI+AKTCETYTALLHSFAGSKLT+KAE
Sbjct: 121 NKSDLSDSDFAIRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAE 180

Query: 181 TLYEKMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSL 240
           TLYEK+KES IPLTALPFNEMMTLYTS+GQVEKVSSIVDDLKQ  VHPDIFTYNLWISSL
Sbjct: 181 TLYEKIKESDIPLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLWISSL 240

Query: 241 AATLNIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQR 300
           AA LNIDGV++IL+EMN+NPNSNE WVRYI LVNIYI SA+LLHS SNSVVES SGI+QR
Sbjct: 241 AAALNIDGVKQILNEMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASGISQR 300

Query: 301 EWITYDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVI 360
           EWITYDLLIILYAG+GNKD+IDQIWRSLRMT+QKMTSRNYICI+SCYLMLD LKEIGEVI
Sbjct: 301 EWITYDLLIILYAGLGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVI 360

Query: 361 DQWKQSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 405
           DQWKQS++ DFD+S+CNRLVNAFVEAG  EK NSFV +L  KNC+PT A
Sbjct: 361 DQWKQSTTTDFDISSCNRLVNAFVEAGLNEKANSFVNVLIQKNCDPTVA 409

The following BLAST results are available for this feature:

BLAST of CmoCh19G004840 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP372_ARATH	3.6e-123	57.50	Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidop...	[more]
PP302_ARATH	3.2e-55	34.22	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]
PP166_ARATH	1.3e-48	31.18	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
PPR86_ARATH	6.5e-48	36.54	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN...	[more]
PP400_ARATH	6.1e-46	32.84	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana GN...	[more]

BLAST of CmoCh19G004840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K649_CUCSA	3.1e-198	85.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066290 PE=4 SV=1	[more]
A0A067DHG1_CITSI	5.7e-144	64.30	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015370mg PE=4 SV=1	[more]
A0A072VEC1_MEDTR	2.7e-141	63.79	PPR containing plant protein OS=Medicago truncatula GN=MTR_1g022400 PE=4 SV=1	[more]
A0A0D2TVY9_GOSRA	1.0e-140	62.87	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G057100 PE=4 SV=1	[more]
A0A067KXR4_JATCU	1.0e-140	62.65	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24946 PE=4 SV=1	[more]

BLAST of CmoCh19G004840 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G09450.1	2.0e-124	57.50	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02820.1	1.8e-56	34.22	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G20710.1	7.3e-50	31.18	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	3.6e-49	36.54	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27460.1	3.4e-47	32.84	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CmoCh19G004840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438238\|ref\|XP_004136896.1\|	1.1e-199	86.21	PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial ...	[more]
gi\|659110259\|ref\|XP_008455133.1\|	3.4e-198	85.22	PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial ...	[more]
gi\|778724550\|ref\|XP_011658826.1\|	4.4e-198	85.57	PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial ...	[more]
gi\|778724555\|ref\|XP_011658827.1\|	6.4e-197	85.71	PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial ...	[more]
gi\|659110257\|ref\|XP_008455132.1\|	1.4e-196	84.60	PREDICTED: pentatricopeptide repeat-containing protein At5g09450, mitochondrial ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G004840.1	CmoCh19G004840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 159..188 score: 2.
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 195..235 score: 3.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 159..191 score: 8.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 191..225 score: 7.947coord: 298..332 score: 5.579coord: 156..190 score: 10.391coord: 369..399 score: 5.415coord: 226..256 score: 7
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 47..396 score: 1.5E
None	No IPR available	PANTHER	PTHR24015:SF155	SUBFAMILY NOT NAMED	coord: 47..396 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G004840	Cucsa.218400	Cucumber (Gy14) v1	cgycmoB0630
CmoCh19G004840	CmaCh19G004680	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G004840	Csa7G066290	Cucumber (Chinese Long) v2	cmocuB526
CmoCh19G004840	MELO3C018589	Melon (DHL92) v3.5.1	cmomeB449
CmoCh19G004840	ClCG09G015930	Watermelon (Charleston Gray)	cmowcgB450
CmoCh19G004840	CSPI07G06070	Wild cucumber (PI 183967)	cmocpiB532
CmoCh19G004840	Lsi03G007290	Bottle gourd (USVL1VR-Ls)	cmolsiB468
CmoCh19G004840	Cp4.1LG15g03630	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G004840	MELO3C018589.2	Melon (DHL92) v3.6.1	cmomedB518
CmoCh19G004840	CsaV3_7G007050	Cucumber (Chinese Long) v3	cmocucB0630
CmoCh19G004840	Bhi05G000740	Wax gourd	cmowgoB0642
CmoCh19G004840	CsGy7G005750	Cucumber (Gy14) v2	cgybcmoB933
CmoCh19G004840	Carg22820	Silver-seed gourd	carcmoB0397

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G004840	Cucumber (Chinese Long) v3	cmocucB0623
CmoCh19G004840	Watermelon (97103) v2	cmowmbB531
CmoCh19G004840	Cucurbita moschata (Rifu)	cmocmoB110
CmoCh19G004840	Cucumber (Gy14) v1	cgycmoB0627
CmoCh19G004840	Cucurbita maxima (Rimu)	cmacmoB143
CmoCh19G004840	Wild cucumber (PI 183967)	cmocpiB525
CmoCh19G004840	Cucumber (Chinese Long) v2	cmocuB519
CmoCh19G004840	Melon (DHL92) v3.5.1	cmomeB454
CmoCh19G004840	Watermelon (Charleston Gray)	cmowcgB441
CmoCh19G004840	Watermelon (97103) v1	cmowmB466
CmoCh19G004840	Cucurbita pepo (Zucchini)	cmocpeB494
CmoCh19G004840	Cucumber (Gy14) v2	cgybcmoB928
CmoCh19G004840	Melon (DHL92) v3.6.1	cmomedB523