CmoCh19G003590 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G003590
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPectin lyase-like superfamily protein
LocationCmo_Chr19 : 3156180 .. 3158515 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAAAGTAACCATCCAAAAAAGGCAACAATCATGAATACTAATGGAATATTATTTATACATTATCTATGCAAGTTATAGGGTTGACTCAAACAAGATATTTTCTTCAGTAACAACTAGACGATTATAAATAATTATCAGCACGTTCCTCAAAATCACTCTGGCAAATTTAACGCACACCTTCTTTATTTTCCGCGTTACCTAAATTTTGTCAAAATAAATCTTTTCATTATAATAATAATTTTTAAAATCACTTCAACTTTTTGAATCCGTATTAAATGACTTTCCAAAAGTATTTAAAAAAATATTTTTAACCATTTAAAAGTGACCATAAATGATAATCATATCTATCAGAACTACTTACATGCAAATCGAAGCATGCATTAGCATTAGCTTATAAATATCACTCCATAGCTCTTCCATTTTTCCATCCGTTACTTCCTTTTCATCTTTCACATTTATCACAAATATTTTTACAATTCAGTTTTCATATGGCTCTCTATGGAACATTAATGCTTCTTCTTTCCCTTCCGCTACTTCTGCTTTTGACCTATGCATTGGCTGATGGATTAACCTTAGATATTGTTAGTCTTGGAGCCAAGCCCGATGGAAAGACCGATGCCTCGCCTGTACTTCAAACAGCATGGGCCAAGGCTTGTGACTCGACCGGACCTGCTACTATTCACGTGCCCATAGGCACATTCTACGTTCAAAGTGGGAGTTTTAATGGGCCTTGTAAGAACAATGCTATTACTATTCGCATCGATGGCACTCTTGTGGCTTCTTCAGACATTCAAGTTCTAGCTAAAACTAAAGCTTGGATTGGGTTTAAAGACGTAAATGGGCTTTCCATTCATGGCGGTGTTATTGATGGAAAAGGATCTGGCATATGGGATTGTAAACACTCTGGGAATAATTGCCCCGATGGAGCACCGGTATGCATTATTTAAGTTGGCTAGATATAACAAAATTTAAAAATTTGTCTTTAGGGAAAAGTTGAAAGAAAATGCACGGTACTAATTCTTGCTCTCCTTTGTTTTGAATTTGTAGAATCTTGAAATCACAAATGCACAAAATGTTATCATCGATGGATTAGCTTCAATTAATAGCCAAATATTTAACATTGTGGTGCACGGTTGCCAAAATGTGAACATTCAAGGAGTGAAGGTCTCGGATCCTGGCGATAGTCCGAACACTGATGGCATCCATGTGCAGGAGTCATCAGATGTGACCATCCTTAGTTCCAACATCGGCACCGGTGATGACTGCATCTCAATTGGTCCAGGGACCACCAACTTATGGATAGAAAGTGTTACATGTGGACCTGGGCACGGAATCAGGTAGATGTTAACAAATAATTTTTTGAAATTATTTTGTTGGTATGAAAAATATATTTGAAATTATAAAACCAAATATAAAATTAGATTTTGAAGGAATAAAAACACATTTTAGAAAATTTTTCATCTTGAACATAGTGATTTTAACTATCCCTATATGTTGAAAATATGTGTTTGTAGCATTGGGAGTTTGGGGAAGTCGGCAGATGAGCCTGGAGTGAAAAATGTGACAGTTACATCATCGACTTTTACCGAGAGTACGAATGGAGTGAGGATTAAGTCTTGGGCAAGACCAAGTAGTGGGTTCGCAACTGATATTCATTTTCAACACATTACTTTGGATAATGTGAAGAACCCTATCATAATTGATCAAAATTACTGTCCGCATGATGAAGGCTGCCCCCATCAGGTATATTTTCTCATTAATCCTCGACATGTTAACTTCTTACGAATTATATTTAACTTTAGATTTGATTAATAGATATTAAATTTTAAATTTCATACGTAATTGATTTTTTTGTTATCTTCAACGAGTTGGAATTTATCTTATTCAAGACGTGTGTTAAATTAGGAGCATTACTTCGGCTACACTTCTAGGTAATGAATTGTGGTGGACAATGTAACTTTCACATATCTCCAAAAGAGTGTTATATTATCCACTTTGATCATCATAAGCTTTTATGGTTTTCACATAAAAGATATCGTACCATTCAAGATAGTTGTCCTTATTAAATTTTCATGCCATATTTTGATTGTTCTTGTTTGCATGAATAGGATTCAGGAGTAAAAATTAGCGAAGTAACTTATGAAGATATCAAGGGAACATCAGCCACTGAAATAGGAGTCAAATTTGATTGTAGCCCAACAAATCCTTGCACTGGACTCACCTTAGAAGACATTAAAGTGACTTATAATGATCAAATCGCTAAAGCTTCATGCAAAGGTGCCAAAGGAACTGCCTCTGGTGTGGTTGAACCTGCTAGTTGCTTAGAATAG

mRNA sequence

ATGGAAAAAAATATTGTTAGTCTTGGAGCCAAGCCCGATGGAAAGACCGATGCCTCGCCTGTACTTCAAACAGCATGGGCCAAGGCTTGTGACTCGACCGGACCTGCTACTATTCACGTGCCCATAGGCACATTCTACGTTCAAAGTGGGAGTTTTAATGGGCCTTGTAAGAACAATGCTATTACTATTCGCATCGATGGCACTCTTGTGGCTTCTTCAGACATTCAAGTTCTAGCTAAAACTAAAGCTTGGATTGGGTTTAAAGACGTAAATGGGCTTTCCATTCATGGCGGTGTTATTGATGGAAAAGGATCTGGCATATGGGATTGTAAACACTCTGGGAATAATTGCCCCGATGGAGCACCGAATCTTGAAATCACAAATGCACAAAATGTTATCATCGATGGATTAGCTTCAATTAATAGCCAAATATTTAACATTGTGGTGCACGGTTGCCAAAATGTGAACATTCAAGGAGTGAAGGTCTCGGATCCTGGCGATAGTCCGAACACTGATGGCATCCATGTGCAGGAGTCATCAGATGTGACCATCCTTAGTTCCAACATCGGCACCGGTGATGACTGCATCTCAATTGGTCCAGGGACCACCAACTTATGGATAGAAAGTGTTACATGTGGACCTGGGCACGGAATCAGCGAAGTAACTTATGAAGATATCAAGGGAACATCAGCCACTGAAATAGGAGTCAAATTTGATTGTAGCCCAACAAATCCTTGCACTGGACTCACCTTAGAAGACATTAAAGTGACTTATAATGATCAAATCGCTAAAGCTTCATGCAAAGGTGCCAAAGGAACTGCCTCTGGTGTGGTTGAACCTGCTAGTTGCTTAGAATAG

Coding sequence (CDS)

ATGGAAAAAAATATTGTTAGTCTTGGAGCCAAGCCCGATGGAAAGACCGATGCCTCGCCTGTACTTCAAACAGCATGGGCCAAGGCTTGTGACTCGACCGGACCTGCTACTATTCACGTGCCCATAGGCACATTCTACGTTCAAAGTGGGAGTTTTAATGGGCCTTGTAAGAACAATGCTATTACTATTCGCATCGATGGCACTCTTGTGGCTTCTTCAGACATTCAAGTTCTAGCTAAAACTAAAGCTTGGATTGGGTTTAAAGACGTAAATGGGCTTTCCATTCATGGCGGTGTTATTGATGGAAAAGGATCTGGCATATGGGATTGTAAACACTCTGGGAATAATTGCCCCGATGGAGCACCGAATCTTGAAATCACAAATGCACAAAATGTTATCATCGATGGATTAGCTTCAATTAATAGCCAAATATTTAACATTGTGGTGCACGGTTGCCAAAATGTGAACATTCAAGGAGTGAAGGTCTCGGATCCTGGCGATAGTCCGAACACTGATGGCATCCATGTGCAGGAGTCATCAGATGTGACCATCCTTAGTTCCAACATCGGCACCGGTGATGACTGCATCTCAATTGGTCCAGGGACCACCAACTTATGGATAGAAAGTGTTACATGTGGACCTGGGCACGGAATCAGCGAAGTAACTTATGAAGATATCAAGGGAACATCAGCCACTGAAATAGGAGTCAAATTTGATTGTAGCCCAACAAATCCTTGCACTGGACTCACCTTAGAAGACATTAAAGTGACTTATAATGATCAAATCGCTAAAGCTTCATGCAAAGGTGCCAAAGGAACTGCCTCTGGTGTGGTTGAACCTGCTAGTTGCTTAGAATAG
Homology
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BLAST of CmoCh19G003590 vs. Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.6e-72
Identity = 129/217 (59.45%), Postives = 165/217 (76.04%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI 63
           N+ SLGAK DGKTD++    +AWAKAC S  P  I+VP GTF+++   F+GPCKNNAIT 
Sbjct: 29  NVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVFSGPCKNNAITF 88

Query: 64  RIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHS-GNNCPDGAP 123
           RI GTLVA SD +V+     WI F  VNG++I GG++DG+G+ +W CK   G +CP GA 
Sbjct: 89  RIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKACHGESCPSGAT 148

Query: 124 NLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDV 183
            L  +++ N+++ GLAS+NSQ+F+IV++  QNV +QGV+VS  G+SPNTDGIHVQ SS V
Sbjct: 149 TLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGV 208

Query: 184 TILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS 220
           TIL+S I TGDDC+SIGPGT+NLWIE V CGPGHGIS
Sbjct: 209 TILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGIS 245

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BLAST of CmoCh19G003590 vs. Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 3.0e-60
Identity = 115/218 (52.75%), Postives = 154/218 (70.64%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNG-PCKNNAIT 63
           N++S GAKPDG  D++     AW  AC S  P TI VP G F V +  F+G  CK   I+
Sbjct: 34  NVLSYGAKPDGSKDSTKAFLAAWDVACASANPTTIIVPKGRFLVGNLVFHGNECKQAPIS 93

Query: 64  IRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSG-NNCPDGA 123
           IRI G++VA  D +++A +K WI F+DV  +SI+GG++D +G+ +W CK++G +NCP GA
Sbjct: 94  IRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPTGA 153

Query: 124 PNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSD 183
            +L  + + N+ I GL SINSQ F+IV+    NVNI GVKVS   +SPNTDGIHV+ S  
Sbjct: 154 KSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHS 213

Query: 184 VTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS 220
           V I +S IGTGDDCISIGPG+TN++I+++ CGPGHGIS
Sbjct: 214 VHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGIS 251

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BLAST of CmoCh19G003590 vs. Swiss-Prot
Match: PGLR2_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-45
Identity = 110/259 (42.47%), Postives = 158/259 (61.00%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI 63
           +I  LGA  +GKTD++  +Q AWA AC  TG  TI +P G F V   +F GPCK + +TI
Sbjct: 42  DITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGD-VTI 101

Query: 64  RIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHG-GVIDGKGSGIWDCKHSGNNCPDG-- 123
           ++DG L+A++D+    +   WI    V+ L I G G +DG+G  +W    S N+C     
Sbjct: 102 QVDGNLLATTDLSQYKEHGNWIEILRVDNLVITGKGNLDGQGPAVW----SKNSCTKKYD 161

Query: 124 ---APN-LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHV 183
               PN L +    N  + G+  +NS+ F++ ++ C+N+ I+ V V+ PGDSPNTDGIH+
Sbjct: 162 CKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHM 221

Query: 184 QESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISEVT---YEDIKGTSATE 243
            +SS +TI ++ IG GDDCISIGPGT+ + I  VTCGPGHGIS  +   Y+D K    T+
Sbjct: 222 GDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEK--DVTD 281

Query: 244 IGVKFDCSPTNPCTGLTLE 253
           I VK DC+      G+ ++
Sbjct: 282 INVK-DCTLKKTMFGVRIK 292

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BLAST of CmoCh19G003590 vs. Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 8.1e-45
Identity = 108/262 (41.22%), Postives = 156/262 (59.54%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI 63
           +I  LGA  +GKTD++  +Q AWA AC  TG  TI +P G F V   +F GPCK + +TI
Sbjct: 42  DITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGD-VTI 101

Query: 64  RIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHG-GVIDGKGSGIW---------DCKHS 123
           +++G L+A++D+        WI    V+ L I G G +DG+G  +W         DCK  
Sbjct: 102 QVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCKIL 161

Query: 124 GNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDG 183
            N+       L +    N  + G+  +NS+ F++ ++ C+++ I+ V V+ PGDSPNTDG
Sbjct: 162 PNS-------LVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDG 221

Query: 184 IHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISEVT---YEDIKGTS 243
           IH+ +SS VTI ++ IG GDDCISIGPGT+ + I  VTCGPGHGIS  +   Y+D K   
Sbjct: 222 IHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEK--D 281

Query: 244 ATEIGVKFDCSPTNPCTGLTLE 253
            T+I VK DC+      G+ ++
Sbjct: 282 VTDINVK-DCTLKKTANGVRIK 292

[Close]
BLAST of CmoCh19G003590 vs. Swiss-Prot
Match: PGLR1_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.1e-44
Identity = 109/259 (42.08%), Postives = 157/259 (60.62%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI 63
           +I  LGA  +GKTD++  +Q AWA AC  TG  TI +P G F V   +F GPCK + +TI
Sbjct: 42  DITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGD-VTI 101

Query: 64  RIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHG-GVIDGKGSGIWDCKHSGNNCPDG-- 123
           ++DG L+A++D+        WI    V+ L I G G +DG+G  +W    S N+C     
Sbjct: 102 QVDGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVW----SKNSCTKKYD 161

Query: 124 ---APN-LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHV 183
               PN L +    N  + G+  +NS+ F++ ++ C+++ I+ V V+ PGDSPNTDGIH+
Sbjct: 162 CKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHM 221

Query: 184 QESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISEVT---YEDIKGTSATE 243
            +SS +TI ++ IG GDDCISIGPGT+ + I  VTCGPGHGIS  +   Y+D K    T+
Sbjct: 222 GDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEK--DVTD 281

Query: 244 IGVKFDCSPTNPCTGLTLE 253
           I VK DC+      G+ ++
Sbjct: 282 INVK-DCTLKKTMFGVRIK 292

[Close]
BLAST of CmoCh19G003590 vs. TrEMBL
Match: A0A0A0KN91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409610 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.3e-89
Identity = 177/296 (59.80%), Postives = 217/296 (73.31%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI 63
           NIVSLGA  DGKTDAS   Q AWA AC S+ PATI+VP G FY+QSG+F+GPCKNNAITI
Sbjct: 28  NIVSLGAIADGKTDASHAFQEAWANACGSSEPATIYVPNGAFYIQSGNFSGPCKNNAITI 87

Query: 64  RIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDGAPN 123
            I+GTL+ASS+IQVLA+++AWI F+ +NGLSI+GGVIDG+G G+W+CKHSG +CPDGA N
Sbjct: 88  VINGTLIASSNIQVLAQSQAWIAFRQINGLSIYGGVIDGQGIGLWNCKHSGKSCPDGATN 147

Query: 124 LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVT 183
           LEI++AQNV ++GL+SINSQ+FNIVV+GC+NV IQGV VS  GDSPNTDGIHVQ+S +V 
Sbjct: 148 LEISHAQNVNVNGLSSINSQMFNIVVYGCENVQIQGVNVSSAGDSPNTDGIHVQQSLNVN 207

Query: 184 ILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS---------EVTYEDIKGTSATEI 243
           I S++IGTGDDCISIGPGTTNLW+E++ CGPGHGIS         E   E++  T+AT  
Sbjct: 208 ISSTSIGTGDDCISIGPGTTNLWMENIKCGPGHGISIGSLGRQVEEAGVENVTVTTATFT 267

Query: 244 G------VKFDCSPTNPCTGLTLEDIKVTYN-------DQIAKASCKGAKGTASGV 278
           G      +K    P+N      L      YN       DQ    + +G  G ASGV
Sbjct: 268 GTQNGVRIKSWGRPSNAFANKILFQHIRFYNVNNPILIDQNYCPNNQGCPGQASGV 323

[Close]
BLAST of CmoCh19G003590 vs. TrEMBL
Match: A0A0D2TSR4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G004000 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 3.0e-83
Identity = 149/305 (48.85%), Postives = 205/305 (67.21%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI 63
           N+++ GAKP+GKTD++     AW  AC S     I+VP G + + S +F G CK+  I  
Sbjct: 31  NVLNFGAKPNGKTDSTKAFLMAWKAACASADSTIIYVPKGRYLLGSMAFQGGCKSPQIIF 90

Query: 64  RIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDGAPN 123
           RIDGTLVA  D +VL K+  W+ F+ VNG+SI GG +D KG  +W CK S +NCP GA  
Sbjct: 91  RIDGTLVAPQDYRVLGKSADWLSFEGVNGVSILGGALDAKGPSLWACKASHSNCPSGATT 150

Query: 124 LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVT 183
           L  TN++N+ I  L S+NSQ+F+IV++GC+NVN+QGV++   G+SPNTDGIHVQ S +V 
Sbjct: 151 LSFTNSKNIRIRSLLSLNSQMFHIVINGCENVNVQGVRIIAAGNSPNTDGIHVQSSKNVN 210

Query: 184 ILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS------------------------ 243
           I+  +I TGDDCISIGPGT NLWIE +TCGPGHGIS                        
Sbjct: 211 IIKCSIKTGDDCISIGPGTKNLWIEQITCGPGHGISIGSLAKDLKEEGVQNVTVSGIKIK 270

Query: 244 EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVE 285
           ++ YE I+GTS+TE+ +KFDCSP NPCTG+ L+++ ++Y ++ A++SC   +G A  +V+
Sbjct: 271 DIIYEGIRGTSSTEVAIKFDCSPKNPCTGIRLQNVNLSYLNKPAQSSCSNVRGKALNLVQ 330

[Close]
BLAST of CmoCh19G003590 vs. TrEMBL
Match: A0A059AU59_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00252 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.8e-80
Identity = 142/219 (64.84%), Postives = 177/219 (80.82%), Query Frame = 1 

Query: 1   MEKNIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNA 60
           ++ N+VSLGAK DGKTD+S    +AWA AC ST  AT++VP G F+VQS SFNGPCKN+A
Sbjct: 15  VQYNVVSLGAKADGKTDSSKAFLSAWASACKSTSAATVYVPQGQFFVQSASFNGPCKNSA 74

Query: 61  ITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDG 120
           IT+RIDGTLVA SD  V  K   WI F+DV GLS+ GG +DG+G+G+W CK SG +CP G
Sbjct: 75  ITVRIDGTLVAPSDYNVNGKVGNWILFRDVTGLSVLGGTLDGQGTGLWACKSSGKSCPGG 134

Query: 121 APNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESS 180
           A NLEI+N+QN+++ GL+S+NSQ+F+IV++ CQNV +QGVKVS  G SPNTDGIHV  S+
Sbjct: 135 ATNLEISNSQNILVSGLSSLNSQMFHIVINACQNVKMQGVKVSASGTSPNTDGIHVGAST 194

Query: 181 DVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS 220
            VTIL+S IGTGDDC+SIGPG+ NLWIE++ CGPGHGIS
Sbjct: 195 GVTILNSKIGTGDDCVSIGPGSNNLWIENIACGPGHGIS 233

[Close]
BLAST of CmoCh19G003590 vs. TrEMBL
Match: A0A118JZV7_CYNCS (Glycoside hydrolase, family 28 OS=Cynara cardunculus var. scolymus GN=Ccrd_021314 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 1.0e-78
Identity = 151/314 (48.09%), Postives = 202/314 (64.33%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI 63
           N+   GAKPDG+TD+S    +AW+  C ST PATI+VP G + +    F GPCKN AITI
Sbjct: 25  NVKKFGAKPDGRTDSSKPFMSAWSAVCGSTKPATIYVPKGRYMLGGLRFRGPCKNRAITI 84

Query: 64  RIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGN-NCPDGAP 123
           RIDGTLVA SD +VL     W+ F  V G++I GG +D +G+ +W CK + + NCP+GA 
Sbjct: 85  RIDGTLVAPSDYRVLGNANYWLLFSRVEGVTIQGGTLDAQGARLWACKSANSKNCPEGAT 144

Query: 124 NLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDV 183
           +L I N+  V+++GL S+NSQ+F++VV+GC NV + GV V  P +SPNTDGIHVQ S+ V
Sbjct: 145 SLAIYNSNKVVVNGLTSLNSQMFHMVVNGCNNVRMIGVNVVAPWNSPNTDGIHVQYSTGV 204

Query: 184 TILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGI------------------------ 243
           TIL+S + TGDDC+SIGPG++NLWIE+V CGPGHGI                        
Sbjct: 205 TILNSKLTTGDDCVSIGPGSSNLWIENVACGPGHGIRVTFKGTQNGLRIKSWARPSSGFV 264

Query: 244 -------------SEVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKA 278
                            Y+DI GTSAT++ VKFDCS  NPC G+T++D+ +++ +Q++ A
Sbjct: 265 NGVLFQNAIMTNVQNPIYQDIHGTSATKVAVKFDCSKMNPCRGITMQDVNLSFKNQLSAA 324

[Close]
BLAST of CmoCh19G003590 vs. TrEMBL
Match: B9HGC5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s00510g PE=3 SV=2)

HSP 1 Score: 298.9 bits (764), Expect = 6.6e-78
Identity = 144/248 (58.06%), Postives = 186/248 (75.00%), Query Frame = 1 

Query: 1   MEKNIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNA 60
           ++ +++S GA PDGKTD++     AW++AC ST PATI VP G+F +    F GPCKNNA
Sbjct: 30  VQYSVLSYGANPDGKTDSTKAFAAAWSQACASTQPATISVPKGSFALGQVRFQGPCKNNA 89

Query: 61  ITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDG 120
           I+IRIDGTLVA SD  VL +TK W+ F+ VNG++I GG +DG+G+G+W CK+SG +CP G
Sbjct: 90  ISIRIDGTLVAPSDYGVLGRTKNWLIFEHVNGVTISGGTLDGQGAGLWSCKNSGKDCPSG 149

Query: 121 APNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESS 180
           A +LE +N+ N+ I GLAS+NSQ+F+IV++ CQNV +QGV+VS  GDSPNTDGIHVQ S+
Sbjct: 150 ATSLEFSNSNNIAITGLASLNSQMFHIVINACQNVKVQGVRVSAAGDSPNTDGIHVQSST 209

Query: 181 DVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISEVTYEDIKGTSATEIGVKFDC 240
            VTIL+S IGTGDDC+SIGPGT+NLWIE+V CGPGHGIS  +     G  + E GV+   
Sbjct: 210 GVTILNSRIGTGDDCVSIGPGTSNLWIENVACGPGHGISIGSL----GKDSQEAGVQNVT 269

Query: 241 SPTNPCTG 249
             T   TG
Sbjct: 270 VKTTTFTG 273

[Close]
BLAST of CmoCh19G003590 vs. TAIR10
Match: AT3G59850.1 (AT3G59850.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 266.5 bits (680), Expect = 1.8e-71
Identity = 130/246 (52.85%), Postives = 172/246 (69.92%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGP-CKNNAIT 63
           NI+S GAKPDGKTD++      WAKAC S  P TI VP G F ++S  F+G  CK  ++T
Sbjct: 24  NILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVPKGRFLLRSIIFDGSKCKRKSVT 83

Query: 64  IRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDGAP 123
            RI GTLVA SD +V+ K   WI F+ ++G+S++GGV+D +G+ +W CK SG NCP GA 
Sbjct: 84  FRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLDAQGASLWSCKKSGKNCPSGAT 143

Query: 124 NLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDV 183
           ++   +++NV+I GL S+NSQ+F++ ++GC NV + GVKVS  G+SPNTDGIHVQ SS V
Sbjct: 144 SIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHVQSSSTV 203

Query: 184 TILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISEVTYEDIKGTSATEIGVKFDCSP 243
           +IL+S I TGDDC+SIGPGT  LWIE+V CGPGHGIS  +     G  + E+GV+     
Sbjct: 204 SILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSL----GKESVEVGVQNITVK 263

Query: 244 TNPCTG 249
           T   TG
Sbjct: 264 TATFTG 265

[Close]
BLAST of CmoCh19G003590 vs. TAIR10
Match: AT2G43870.1 (AT2G43870.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 261.2 bits (666), Expect = 7.7e-70
Identity = 118/217 (54.38%), Postives = 159/217 (73.27%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGP-CKNNAIT 63
           N++S GAKPDGKTDA+      W  AC S+ P TI VP G F ++S +F+G  CK   +T
Sbjct: 22  NVLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVVPKGRFLLRSVTFDGSKCKPKPVT 81

Query: 64  IRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDGAP 123
            RIDGTLVA +D +V+     WI F+ ++G++++GGV+D +G+ +WDCK SG NCP GA 
Sbjct: 82  FRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGVLDARGASLWDCKKSGKNCPSGAT 141

Query: 124 NLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDV 183
            +   ++ NV++ GL S+NSQ+F++V++GC NV +QGVKV   G+SPNTDGIHVQ SS V
Sbjct: 142 TIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVKVLAAGNSPNTDGIHVQSSSSV 201

Query: 184 TILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS 220
           +I ++ I TGDDC+SIGPGT  LWIE+V CGPGHGIS
Sbjct: 202 SIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGIS 238

[Close]
BLAST of CmoCh19G003590 vs. TAIR10
Match: AT2G43860.1 (AT2G43860.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 233.4 bits (594), Expect = 1.7e-61
Identity = 115/218 (52.75%), Postives = 154/218 (70.64%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNG-PCKNNAIT 63
           N++S GAKPDG  D++     AW  AC S  P TI VP G F V +  F+G  CK   I+
Sbjct: 34  NVLSYGAKPDGSKDSTKAFLAAWDVACASANPTTIIVPKGRFLVGNLVFHGNECKQAPIS 93

Query: 64  IRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSG-NNCPDGA 123
           IRI G++VA  D +++A +K WI F+DV  +SI+GG++D +G+ +W CK++G +NCP GA
Sbjct: 94  IRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPTGA 153

Query: 124 PNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSD 183
            +L  + + N+ I GL SINSQ F+IV+    NVNI GVKVS   +SPNTDGIHV+ S  
Sbjct: 154 KSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHS 213

Query: 184 VTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS 220
           V I +S IGTGDDCISIGPG+TN++I+++ CGPGHGIS
Sbjct: 214 VHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGIS 251

[Close]
BLAST of CmoCh19G003590 vs. TAIR10
Match: AT1G05660.1 (AT1G05660.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 219.2 bits (557), Expect = 3.4e-57
Identity = 102/216 (47.22%), Postives = 142/216 (65.74%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI 63
           N+VS GAKPDG TD++     AW  AC S   AT+ VP GTF ++  +F GPCK+  IT 
Sbjct: 29  NVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKGTFLLKVITFGGPCKSK-ITF 88

Query: 64  RIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDGAPN 123
           ++ GT++A  D +    +  WI F  VN  S+ GG  D + +G W C+ SG NCP G  +
Sbjct: 89  QVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTFDARANGFWSCRKSGQNCPPGVRS 148

Query: 124 LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVT 183
           +   +A++VII G+ S+NSQ+ ++ ++GC NV ++ VK+  PG+SPNTDG HVQ S+ VT
Sbjct: 149 ISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQHSTGVT 208

Query: 184 ILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS 220
              S + TGDDC++IGPGT NL I  + CGPGHG+S
Sbjct: 209 FTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVS 243

[Close]
BLAST of CmoCh19G003590 vs. TAIR10
Match: AT1G05650.1 (AT1G05650.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 218.8 bits (556), Expect = 4.4e-57
Identity = 101/216 (46.76%), Postives = 142/216 (65.74%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI 63
           N+VS GAKPDG TD++     AW  AC S   AT+ VP GTF ++  +F GPCK+  IT 
Sbjct: 29  NVVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVVPTGTFLLKVITFGGPCKSK-ITF 88

Query: 64  RIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDGAPN 123
           ++ GT+VA  D +    + +WI F  VN  S+ GG  D +GSG W C+ SG NCP G  +
Sbjct: 89  QVTGTVVAPEDYRTFGNSGSWILFNKVNRFSLVGGTFDARGSGFWSCRKSGQNCPPGVRS 148

Query: 124 LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVT 183
           +   +A++VII G+ S+NSQ+ ++ ++GC NV ++ +++  PGDSPNTDG  VQ S+ VT
Sbjct: 149 ISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVAVRNIRLVAPGDSPNTDGFTVQFSTGVT 208

Query: 184 ILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS 220
           +  S + TGDDC++IG GT N  I  + CGPGHG+S
Sbjct: 209 LTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGVS 243

[Close]
BLAST of CmoCh19G003590 vs. NCBI nr
Match: gi|449445220|ref|XP_004140371.1| (PREDICTED: polygalacturonase [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 1.8e-89
Identity = 177/296 (59.80%), Postives = 217/296 (73.31%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI 63
           NIVSLGA  DGKTDAS   Q AWA AC S+ PATI+VP G FY+QSG+F+GPCKNNAITI
Sbjct: 28  NIVSLGAIADGKTDASHAFQEAWANACGSSEPATIYVPNGAFYIQSGNFSGPCKNNAITI 87

Query: 64  RIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDGAPN 123
            I+GTL+ASS+IQVLA+++AWI F+ +NGLSI+GGVIDG+G G+W+CKHSG +CPDGA N
Sbjct: 88  VINGTLIASSNIQVLAQSQAWIAFRQINGLSIYGGVIDGQGIGLWNCKHSGKSCPDGATN 147

Query: 124 LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVT 183
           LEI++AQNV ++GL+SINSQ+FNIVV+GC+NV IQGV VS  GDSPNTDGIHVQ+S +V 
Sbjct: 148 LEISHAQNVNVNGLSSINSQMFNIVVYGCENVQIQGVNVSSAGDSPNTDGIHVQQSLNVN 207

Query: 184 ILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS---------EVTYEDIKGTSATEI 243
           I S++IGTGDDCISIGPGTTNLW+E++ CGPGHGIS         E   E++  T+AT  
Sbjct: 208 ISSTSIGTGDDCISIGPGTTNLWMENIKCGPGHGISIGSLGRQVEEAGVENVTVTTATFT 267

Query: 244 G------VKFDCSPTNPCTGLTLEDIKVTYN-------DQIAKASCKGAKGTASGV 278
           G      +K    P+N      L      YN       DQ    + +G  G ASGV
Sbjct: 268 GTQNGVRIKSWGRPSNAFANKILFQHIRFYNVNNPILIDQNYCPNNQGCPGQASGV 323

[Close]
BLAST of CmoCh19G003590 vs. NCBI nr
Match: gi|659121214|ref|XP_008460550.1| (PREDICTED: polygalacturonase-like [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 2.0e-88
Identity = 161/234 (68.80%), Postives = 194/234 (82.91%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI 63
           NIVSLGAK DG TDASP  Q AWA AC S+ PATI+VP G FYV SG+F GPCKNNAITI
Sbjct: 28  NIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCKNNAITI 87

Query: 64  RIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDGAPN 123
            I+GTL+ASS+IQVLA+++AWI F+ +NGLSI+GGVIDG+G G+W+CKHSG +CPDGA +
Sbjct: 88  LINGTLMASSNIQVLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSCPDGATS 147

Query: 124 LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVT 183
           LEI ++QNV ++GL+S+NSQ+FNIVV+GCQNV IQGV VS   DSPNTDGIHVQ+S +V 
Sbjct: 148 LEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQQSLNVN 207

Query: 184 ILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISEVTYEDIKGTSATEIGVK 238
           I +SNIGTGDDCISIGPGTTNLW+E++ CGPGHGIS  +     G  A E GV+
Sbjct: 208 ISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGISIGSL----GKQAEEAGVQ 257

[Close]
BLAST of CmoCh19G003590 vs. NCBI nr
Match: gi|763811681|gb|KJB78533.1| (hypothetical protein B456_013G004000 [Gossypium raimondii])

HSP 1 Score: 316.6 bits (810), Expect = 4.4e-83
Identity = 149/305 (48.85%), Postives = 205/305 (67.21%), Query Frame = 1 

Query: 4   NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI 63
           N+++ GAKP+GKTD++     AW  AC S     I+VP G + + S +F G CK+  I  
Sbjct: 31  NVLNFGAKPNGKTDSTKAFLMAWKAACASADSTIIYVPKGRYLLGSMAFQGGCKSPQIIF 90

Query: 64  RIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDGAPN 123
           RIDGTLVA  D +VL K+  W+ F+ VNG+SI GG +D KG  +W CK S +NCP GA  
Sbjct: 91  RIDGTLVAPQDYRVLGKSADWLSFEGVNGVSILGGALDAKGPSLWACKASHSNCPSGATT 150

Query: 124 LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVT 183
           L  TN++N+ I  L S+NSQ+F+IV++GC+NVN+QGV++   G+SPNTDGIHVQ S +V 
Sbjct: 151 LSFTNSKNIRIRSLLSLNSQMFHIVINGCENVNVQGVRIIAAGNSPNTDGIHVQSSKNVN 210

Query: 184 ILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS------------------------ 243
           I+  +I TGDDCISIGPGT NLWIE +TCGPGHGIS                        
Sbjct: 211 IIKCSIKTGDDCISIGPGTKNLWIEQITCGPGHGISIGSLAKDLKEEGVQNVTVSGIKIK 270

Query: 244 EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVE 285
           ++ YE I+GTS+TE+ +KFDCSP NPCTG+ L+++ ++Y ++ A++SC   +G A  +V+
Sbjct: 271 DIIYEGIRGTSSTEVAIKFDCSPKNPCTGIRLQNVNLSYLNKPAQSSCSNVRGKALNLVQ 330

[Close]
BLAST of CmoCh19G003590 vs. NCBI nr
Match: gi|629091487|gb|KCW57482.1| (hypothetical protein EUGRSUZ_H00252 [Eucalyptus grandis])

HSP 1 Score: 307.4 bits (786), Expect = 2.7e-80
Identity = 142/219 (64.84%), Postives = 177/219 (80.82%), Query Frame = 1 

Query: 1   MEKNIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNA 60
           ++ N+VSLGAK DGKTD+S    +AWA AC ST  AT++VP G F+VQS SFNGPCKN+A
Sbjct: 15  VQYNVVSLGAKADGKTDSSKAFLSAWASACKSTSAATVYVPQGQFFVQSASFNGPCKNSA 74

Query: 61  ITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDG 120
           IT+RIDGTLVA SD  V  K   WI F+DV GLS+ GG +DG+G+G+W CK SG +CP G
Sbjct: 75  ITVRIDGTLVAPSDYNVNGKVGNWILFRDVTGLSVLGGTLDGQGTGLWACKSSGKSCPGG 134

Query: 121 APNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESS 180
           A NLEI+N+QN+++ GL+S+NSQ+F+IV++ CQNV +QGVKVS  G SPNTDGIHV  S+
Sbjct: 135 ATNLEISNSQNILVSGLSSLNSQMFHIVINACQNVKMQGVKVSASGTSPNTDGIHVGAST 194

Query: 181 DVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS 220
            VTIL+S IGTGDDC+SIGPG+ NLWIE++ CGPGHGIS
Sbjct: 195 GVTILNSKIGTGDDCVSIGPGSNNLWIENIACGPGHGIS 233

[Close]
BLAST of CmoCh19G003590 vs. NCBI nr
Match: gi|702432493|ref|XP_010069207.1| (PREDICTED: polygalacturonase-like [Eucalyptus grandis])

HSP 1 Score: 307.4 bits (786), Expect = 2.7e-80
Identity = 142/219 (64.84%), Postives = 177/219 (80.82%), Query Frame = 1 

Query: 1   MEKNIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNA 60
           ++ N+VSLGAK DGKTD+S    +AWA AC ST  AT++VP G F+VQS SFNGPCKN+A
Sbjct: 35  VQYNVVSLGAKADGKTDSSKAFLSAWASACKSTSAATVYVPQGQFFVQSASFNGPCKNSA 94

Query: 61  ITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDCKHSGNNCPDG 120
           IT+RIDGTLVA SD  V  K   WI F+DV GLS+ GG +DG+G+G+W CK SG +CP G
Sbjct: 95  ITVRIDGTLVAPSDYNVNGKVGNWILFRDVTGLSVLGGTLDGQGTGLWACKSSGKSCPGG 154

Query: 121 APNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESS 180
           A NLEI+N+QN+++ GL+S+NSQ+F+IV++ CQNV +QGVKVS  G SPNTDGIHV  S+
Sbjct: 155 ATNLEISNSQNILVSGLSSLNSQMFHIVINACQNVKMQGVKVSASGTSPNTDGIHVGAST 214

Query: 181 DVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGIS 220
            VTIL+S IGTGDDC+SIGPG+ NLWIE++ CGPGHGIS
Sbjct: 215 GVTILNSKIGTGDDCVSIGPGSNNLWIENIACGPGHGIS 253

The following BLAST results are available for this feature:
BLAST of CmoCh19G003590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PGLR_PRUPE1.6e-7259.45Polygalacturonase OS=Prunus persica PE=2 SV=1[more]
PGLR6_ARATH3.0e-6052.75Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 S... [more]
PGLR2_MAIZE1.6e-4542.47Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1[more]
PGLR3_MAIZE8.1e-4541.22Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1[more]
PGLR1_MAIZE1.1e-4442.08Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1[more]
BLAST of CmoCh19G003590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KN91_CUCSA1.3e-8959.80Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409610 PE=3 SV=1[more]
A0A0D2TSR4_GOSRA3.0e-8348.85Uncharacterized protein OS=Gossypium raimondii GN=B456_013G004000 PE=3 SV=1[more]
A0A059AU59_EUCGR1.8e-8064.84Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H00252 PE=3 SV=1[more]
A0A118JZV7_CYNCS1.0e-7848.09Glycoside hydrolase, family 28 OS=Cynara cardunculus var. scolymus GN=Ccrd_02131... [more]
B9HGC5_POPTR6.6e-7858.06Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s00510g PE=3 SV=2[more]
BLAST of CmoCh19G003590 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G59850.11.8e-7152.85 Pectin lyase-like superfamily protein[more]
AT2G43870.17.7e-7054.38 Pectin lyase-like superfamily protein[more]
AT2G43860.11.7e-6152.75 Pectin lyase-like superfamily protein[more]
AT1G05660.13.4e-5747.22 Pectin lyase-like superfamily protein[more]
AT1G05650.14.4e-5746.76 Pectin lyase-like superfamily protein[more]
BLAST of CmoCh19G003590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445220|ref|XP_004140371.1|1.8e-8959.80PREDICTED: polygalacturonase [Cucumis sativus][more]
gi|659121214|ref|XP_008460550.1|2.0e-8868.80PREDICTED: polygalacturonase-like [Cucumis melo][more]
gi|763811681|gb|KJB78533.1|4.4e-8348.85hypothetical protein B456_013G004000 [Gossypium raimondii][more]
gi|629091487|gb|KCW57482.1|2.7e-8064.84hypothetical protein EUGRSUZ_H00252 [Eucalyptus grandis][more]
gi|702432493|ref|XP_010069207.1|2.7e-8064.84PREDICTED: polygalacturonase-like [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000743Glyco_hydro_28
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071555 cell wall organization
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005576 extracellular region
cellular_component GO:0005575 cellular_component
molecular_function GO:0004650 polygalacturonase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G003590.1CmoCh19G003590.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 30..219
score: 3.7
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 4..284
score: 4.71
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 219..284
score: 8.5E-16coord: 4..218
score: 2.4
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 4..285
score: 6.6E
NoneNo IPR availablePANTHERPTHR31375:SF2POLYGALACTURONASE/PECTINASEcoord: 4..285
score: 6.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh19G003590CmaCh19G003150Cucurbita maxima (Rimu)cmacmoB509
CmoCh19G003590CmaCh19G003320Cucurbita maxima (Rimu)cmacmoB511
CmoCh19G003590Lsi03G009080Bottle gourd (USVL1VR-Ls)cmolsiB466
CmoCh19G003590Cla97C09G176970Watermelon (97103) v2cmowmbB532
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G003590Cucurbita moschata (Rifu)cmocmoB109
CmoCh19G003590Cucurbita maxima (Rimu)cmacmoB147
CmoCh19G003590Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G003590Cucurbita maxima (Rimu)cmacmoB510
CmoCh19G003590Watermelon (Charleston Gray)cmowcgB444
CmoCh19G003590Watermelon (Charleston Gray)cmowcgB452
CmoCh19G003590Cucurbita pepo (Zucchini)cmocpeB481