CmoCh19G003390 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G003390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	(Polygalacturonase) (3.2.1.15)
Location	Cmo_Chr19 : 2849677 .. 2854568 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGTCAAATGTTTGTTACCTGTAGTCGCATTTCTGGATGTCACTGTCATGTTTGTCCAAGGTGTGTTGTCTGTGATCTCATGCTCGTTTCAAACCCCTTTTACTTGTTTTCACGGAGTTAGGTCTTTATCATTTCTATTATGTCAATTCGAAGTTGTATGACCGTTCACCAAAATCGTGTTTATACCTACGAGGATCAAAATGCCTCAAAATGTACTATAAGGGGATGTGACAAGTTTTCAATTCTTAATATCTGGGTTATACGTAAGCCGTAATACTTGCTTAAGGCGCCCAATCCTTTTATTCATAAGATATCTCTCTCTCTCATCCCTCACTTATTTTACCTTTTCATGGATCTCTCTCTCCCTCCATCCCTCCTAGATTTGTTGTCTCTACACCAATTAGACTTTAGTTCACTACACCAATTAGACTTTAGTTCATTAATTTCAAATAGATCCAGTCAAGTTTACAAAAATAAAAGGAAAGAACCTATCATAGTGATAATTGGGTTTAATTTAATCAAAGGAGAAAAGAGATGTAACATAGTGATACAAATCCCTAAGTGACGATAAAAAAAAATCTATATATGATTAAAAAAATTTGTTGATAGGTATAAAAACCGCATATTATTGATATACTCTATCATTGATAGACTTTAAGACTTCGAAAAATATAACATTTGTAAATGATTTCTGGGTGTGATGTATTTGTAAATTTATTGGATAGTTACAAATATGACAAACAATTCTACCTCTCATTATTTGTGACATCTTTGCAAATAAAAAATCACCAACTTTCTGTTACATCACTAACATCAACGTGATAAAAATGACTGAAAAATATATAATAGTGTTTTGTCGATCCTATCTTACAGAATGTTTTATTATTTTTATTATAATAGAGAATCAATATAGAATCCATATCTAAAAATATAAACCCCTAAAAGTATTAGGAAATTGTTATTCTTATAGTAGGAGGTTGAGAGGCCAATGAAACAGATGGAAAAATTAGGATTTTTTTTTTTTGTTAAAATCTTCCCATCCCTTTTTAAGTTAAAACAAAAATAAAATCATATTGACAAAGAAACCTTTTTTAATTTAATAATTTTAAAAATGAGAGATCGTTAAAATGATAACTAGTGTATTATCTTATAAGATAGACTTAAATTTAAAAATGTTTGCACGAGACAGAGTTAAATGATCATTTAATTCGATTAAATTTACCTACATGACATACCTAATTAAAAATGGTAAACCATATAAAAACAATAATGGTTAAATAGAACAAAAATAAAATAGTACTTGAGACAGATAAGTTAAAATTAGAGTTAGAAGGGTAAGCATTAACCTATAAATATCACTCCACACCTCTTCTATTATCCAATCACTTGCTTCCTTTCTCTCTCTCTCTCATGCTTATCATGAACAATTGTATCATTAAGTTTTCTTTGTCTCTTCTTGTAATCTTACATGTTTTTCTTTCCCTGCTACTTTTGTTTTTTAACCATGCCTCAGCCGCTGAATTAACATTCAATATTATTACTCTTGGAGCTAAGCCTGATGAAAAGACCGATGCCTCGCCTATGCTTCAAACGGCATGGGCTAAGGTCTGTGACTCATCTGAACCAGCCACTATTTATGTTCCCGAGGGTATATTCTTCGTTCGAAGTGTGAGATTTAATGGGCCTTGTAAGAACAATGCTATTACTGTTCTTATTGATGGAACTCTTGTGGCTTCCTCGGACATTCAAGTTTTAGCTAATTCTAGTTCTTGGATTTCGTTTAATCACATAAATGGGCTTTCCATTACTGGCGGTATTATTGATGGGCAAGGAACACCCTTGTGGAATTGTAAACACTCACGGAAGAGTTGCCCCATTGGAGCCAGGGTATGTAGAATTTGAGTAGGCTCCATATAAAAAAATTTTGAAAATTTTTCTTTTAACTCAAAGTTCAAAGGGAATGACTGGATTAATTACAATATTATTTTAAATTTTTACTAATTATGGCTTTTGATTGTTTTGAATGGATAGAGTCTTCAAATAAATGATGGAAAGAATGTGAACATCAATGGATTATCTTCAATTAACAGCCAATTGTTCGGCATTGTTATGAATCGGTGCCAAAACGTGCATATGAGTAGAGTGAATGTCTTGGCTGCGGGCGATAGTCCAAACACTGATGGCATCCATGTGCAACAATCATCTGATGTGACCATCCTCAACTCGAACATTGGAAACGGTGACGACTGCATCTCCATCGGTCCAGGGACATCCAACATGTGGATCGAAACTATTACATGTGGGCCTGGACATGGAATCAGGTAACTAGAGATAGATTAGAATGAACGTGTTTAGAAATAAAAAAGGGTTTAAATAAATTTGTCACATTAATTTTTAAAAAATAATCTAAACTTTAAATTAAATTCGAATAATTAAAATATATTCTAAAGTTATTTTGAACGTGAGAAAAATTATTTAAATTATTTTACAATTATTTTGGATAAAAATAGATATATAATATATTAGGTTAGAGTGAGGAAATTAAACCTCATGAAACATTTGGTATTTTGTTGAATGTGTTTGTAGCATTGGGAGCTTAGGGATAGAGGCTGAGGAGGATGGAGTGCATAACGTTACCGTGAAATCATCTACATTCACGGGGACTCAGAATGGAGTAAGGATTAAGTCTTGGGGAAGACCAAGCAATGGATTCGCTACAAACGTTCATTTTCAACACATTACTATGGATAATGTGAAAAACCCAATCATAATCGATCAAAATTATTGTCCACATCTCAAAGATTGTCCTGGTCAGGTATACTTCCTCATTAATCTCATAGATGTTAATTTTTTTCTTATTATATTTTTTCTTAAATTTGATGAATAGAACTTAAATTTTAAATTTTATAAATAATTGATTTATTTTATCTCTAATTGTTTGAAATTTGTTTGTGTTTAAGATGGGCGCTAAATTATTAATATTATTTTTTGGTACATTAAATTACTTTTATAGATAATAAATTAGGGATGCTATTACTCTTCGATGTCTTAAAATGGTATGAAGCTTTTATGATTTTATTTTTTAATTTATCCAAAATATCTAATATCATTGGAGATAATTGCTCAAACTTATATAACTATCTAGAAAATTTAAGAATATGCTCGATTTATATCTTATTTGTTGTATATATTTGTATCTTGTTATTGAATTCCTAATTTATATTTGGTTTTATAATATAGTTTTATAATATAACTTAGGGTTTCATGGAGTTAAAAAATTTTGGTGGAGAATAACTCAGTAAAACAAGTTACATGGTAAATGGTTTTATAGATGTCCTTTATAGATGTCCTTGTTTATCGGTTTTAATAGCATATTTTGATTGTTCTTTATTTTAATAGGATTCTGGAGTTAAAGTTAGCGAAGTAACATACGAAGACATCAAGGGAACTTCAGCCACTGAAATAGCAATCAAGTTTGATTGTAGTCCAACAAATCATTGCACTGGATTAAACTTGATAGACATAAACCTAACTTATGAGAATCACATCGCTAAAGCTTCATGTAAAAATGCTGAAGGAACTACCTCTGGTGTGGTTGAACCTTCTAGTTGTTTAGCACCCGCAAACTTTTATCCATATAATATAGACCCTTTAGGTTATTCTTAAACATGATCCTCTTGTATGTCAATCACATATGGGATAATATTAAATTTTAAATAAAATAATCAAAGTTGTTATTAAAATTAAACAATTAATTACAAGGCTTTAGGGCATAAATCTTAACACTCTCCTAGATATTCTTACATTTTCTCCTCTGTTTATGTTACCCTAGTTTATCTGAGTGGCCTAGATCATAGATTGTAGCATCATGGTATCTACTTATTCCAACACTTGTTCTTAGCATGCCTCTACAGGTTTTAGGGTCCATAATCTATCATCATGCAATAGACACCAAGTTATTAGGTATTGTAACAAATTTTATCCTAAATAGACACCAAGTTATTAGGTATTGTGACAAATTGTATCCTAATTAGTTCATAAGACAGTAACTGACATATGCATATAATTCACATAAGGTGTGAGATCATGCCTACTAACCTTACAACTTACATACCTTGTCAAGGCGAGGTGAGCTTAAGTCAAGCTACAGGCTATCACGGTCATGCTTGTCCATGGCGTGTTGCCTACGGTCGCATGTCAGATGTCCCCATCATGCTTGTTCATGACGTATTGTCCACAGCCGCGTGCCTGTTTCAAACCCCTTTACTTACTTTCAAGTTAGATAGGCATTTTATATTATTGTTGTGTTAGTACGGGGTGTATGACCTGTCAACAAAATCATGTCTACACCCGTTAGGGCTAAAATGCCTCAAAATGTACTATAAGGTATGTGCCTAGTAATCAATTCTTCCTATTCAGGTTATATGCTATCAACGTTGTGGTTGTTGCTTATTTTCTTTTAGCCTATATTATCTTGTTCACTGGGTTAGAATAAGTGTCGCATAATCACTATCCCGATGTCACAATAGTTCGACTGTGATAAGTAGTATCAAAGCCAAGTTGTCTCCTTGAATCGTAGGACATAAACATGTTTGCTGCAAAAGAACTGGGCAAGTCCCAGACTAATCAATTGGTAGAGATAAAAAATTAGTTACTCTACCTAAGTGAAGTTCCTGATGAATTGGGGCTTTTAAAATCTCGCATTAATTTTATTTTCGCTAAAGCTAACAGGATCAACGAGCTGGCAGGTCGCCTTGAGAAACTAATGTCCATGTATTAATAGTTAGGGTCAAGGCGCCAAAAGACTGCCACAACTGCTAGTGGCTCAAGCGTGGGGATAGCTCGACGGGCTCTGTTGCTTGGATGGAAGAACATATTGAGGGCTTAG

mRNA sequence

ATGCTTGTCAAATGTTTGTTACCTGTAGTCGCATTTCTGGATGTCACTGTCATGTTTGTCCAAGCCGCTGAATTAACATTCAATATTATTACTCTTGGAGCTAAGCCTGATGAAAAGACCGATGCCTCGCCTATGCTTCAAACGGCATGGGCTAAGGTCTGTGACTCATCTGAACCAGCCACTATTTATGTTCCCGAGGGTATATTCTTCGTTCGAAGTGTGAGATTTAATGGGCCTTGTAAGAACAATGCTATTACTGTTCTTATTGATGGAACTCTTGTGGCTTCCTCGGACATTCAAGTTTTAGCTAATTCTAGTTCTTGGATTTCGTTTAATCACATAAATGGGCTTTCCATTACTGGCGGTATTATTGATGGGCAAGGAACACCCTTGTGGAATTGTAAACACTCACGGAAGAGTTGCCCCATTGGAGCCAGGAGTCTTCAAATAAATGATGGAAAGAATGTGAACATCAATGGATTATCTTCAATTAACAGCCAATTGTTCGGCATTGTTATGAATCGGTGCCAAAACGTGCATATGAGTAGAGTGAATGTCTTGGCTGCGGGCGATAGTCCAAACACTGATGGCATCCATGTGCAACAATCATCTGATGTGACCATCCTCAACTCGAACATTGGAAACGGTGACGACTGCATCTCCATCGGTCCAGGGACATCCAACATGTGGATCGAAACTATTACATGTGGGCCTGGACATGGAATCAGCATTGGGAGCTTAGGGATAGAGGCTGAGGAGGATGGAGTGCATAACGTTACCGTGAAATCATCTACATTCACGGGGACTCAGAATGGAGTAAGGATTAAGTCTTGGGGAAGACCAAGCAATGGATTCGCTACAAACGTTCATTTTCAACACATTACTATGGATAATGTGAAAAACCCAATCATAATCGATCAAAATTATTGTCCACATCTCAAAGATTGTCCTGGTCAGGATTCTGGAGTTAAAGTTAGCGAAGTAACATACGAAGACATCAAGGGAACTTCAGCCACTGAAATAGCAATCAAGTTTGATTGTAGTCCAACAAATCATTGCACTGGATTAAACTTGATAGACATAAACCTAACTTATGAGAATCACATCGCTAAAGCTTCATGTAAAAATGCTGAAGGAACTACCTCTGGTGTGGTTGAACCTTCTAGTTGTTTAGCACCCGCAAACTTTTATCCATATAATATAGACCCTTTAGGCGAGGTGAGCTTAAGTCAAGCTACAGGCTATCACGGTCATGCTTGTCCATGGCGTGTTGCCTACGGTCGCATGTCAGATGTCCCCATCATGCTTGTTCATGACTTAGGGTCAAGGCGCCAAAAGACTGCCACAACTGCTAGTGGCTCAAGCGTGGGGATAGCTCGACGGGCTCTGTTGCTTGGATGGAAGAACATATTGAGGGCTTAG

Coding sequence (CDS)

ATGCTTGTCAAATGTTTGTTACCTGTAGTCGCATTTCTGGATGTCACTGTCATGTTTGTCCAAGCCGCTGAATTAACATTCAATATTATTACTCTTGGAGCTAAGCCTGATGAAAAGACCGATGCCTCGCCTATGCTTCAAACGGCATGGGCTAAGGTCTGTGACTCATCTGAACCAGCCACTATTTATGTTCCCGAGGGTATATTCTTCGTTCGAAGTGTGAGATTTAATGGGCCTTGTAAGAACAATGCTATTACTGTTCTTATTGATGGAACTCTTGTGGCTTCCTCGGACATTCAAGTTTTAGCTAATTCTAGTTCTTGGATTTCGTTTAATCACATAAATGGGCTTTCCATTACTGGCGGTATTATTGATGGGCAAGGAACACCCTTGTGGAATTGTAAACACTCACGGAAGAGTTGCCCCATTGGAGCCAGGAGTCTTCAAATAAATGATGGAAAGAATGTGAACATCAATGGATTATCTTCAATTAACAGCCAATTGTTCGGCATTGTTATGAATCGGTGCCAAAACGTGCATATGAGTAGAGTGAATGTCTTGGCTGCGGGCGATAGTCCAAACACTGATGGCATCCATGTGCAACAATCATCTGATGTGACCATCCTCAACTCGAACATTGGAAACGGTGACGACTGCATCTCCATCGGTCCAGGGACATCCAACATGTGGATCGAAACTATTACATGTGGGCCTGGACATGGAATCAGCATTGGGAGCTTAGGGATAGAGGCTGAGGAGGATGGAGTGCATAACGTTACCGTGAAATCATCTACATTCACGGGGACTCAGAATGGAGTAAGGATTAAGTCTTGGGGAAGACCAAGCAATGGATTCGCTACAAACGTTCATTTTCAACACATTACTATGGATAATGTGAAAAACCCAATCATAATCGATCAAAATTATTGTCCACATCTCAAAGATTGTCCTGGTCAGGATTCTGGAGTTAAAGTTAGCGAAGTAACATACGAAGACATCAAGGGAACTTCAGCCACTGAAATAGCAATCAAGTTTGATTGTAGTCCAACAAATCATTGCACTGGATTAAACTTGATAGACATAAACCTAACTTATGAGAATCACATCGCTAAAGCTTCATGTAAAAATGCTGAAGGAACTACCTCTGGTGTGGTTGAACCTTCTAGTTGTTTAGCACCCGCAAACTTTTATCCATATAATATAGACCCTTTAGGCGAGGTGAGCTTAAGTCAAGCTACAGGCTATCACGGTCATGCTTGTCCATGGCGTGTTGCCTACGGTCGCATGTCAGATGTCCCCATCATGCTTGTTCATGACTTAGGGTCAAGGCGCCAAAAGACTGCCACAACTGCTAGTGGCTCAAGCGTGGGGATAGCTCGACGGGCTCTGTTGCTTGGATGGAAGAACATATTGAGGGCTTAG

Homology

[Close]

BLAST of CmoCh19G003390 vs. Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 493.8 bits (1270), Expect = 2.1e-138
Identity = 234/371 (63.07%), Postives = 291/371 (78.44%), Query Frame = 1


Query: 22  AAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGPCK 81
           A+ LT+N+ +LGAK D KTD++    +AWAK C S  P  IYVP G FF+R V F+GPCK
Sbjct: 23  ASPLTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVFSGPCK 82

Query: 82  NNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDGQGTPLWNCKHSR-KS 141
           NNAIT  I GTLVA SD +V+ N+++WI F+H+NG++I+GGI+DGQGT LW CK    +S
Sbjct: 83  NNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKACHGES 142

Query: 142 CPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHV 201
           CP GA +L  +D  N+ ++GL+S+NSQ+F IV+N  QNV M  V V  +G+SPNTDGIHV
Sbjct: 143 CPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHV 202

Query: 202 QQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVT 261
           Q SS VTILNS I  GDDC+SIGPGTSN+WIE + CGPGHGISIGSLG E EE GV NVT
Sbjct: 203 QMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVT 262

Query: 262 VKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQD 321
           VK+ TF+GTQNG+RIKSWGRPS GFA N+ FQH TM NV+NPI+IDQ+YCP  K CPGQ 
Sbjct: 263 VKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQV 322

Query: 322 SGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYENHIAKASCKNAEGT 381
           SGV++S+VTYEDI GTSATE+A+KFDCSP + C  + L D+ LTY+N  A++SC +A+GT
Sbjct: 323 SGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTYKNQAAESSCSHADGT 382

Query: 382 TSGVVEPSSCL 392
           T GVV+P+SCL
Sbjct: 383 TEGVVQPTSCL 393

[Close]

BLAST of CmoCh19G003390 vs. Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 5.2e-105
Identity = 202/391 (51.66%), Postives = 264/391 (67.52%), Query Frame = 1


Query: 6   LLPV-VAFLDVTVMFVQAAEL--TFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATI 65
           +LP+ +  LD T++   A  +  T N+++ GAKPD   D++     AW   C S+ P TI
Sbjct: 9   ILPLALIILDFTLISSLAHPIPSTLNVLSYGAKPDGSKDSTKAFLAAWDVACASANPTTI 68

Query: 66  YVPEGIFFVRSVRFNG-PCKNNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITG 125
            VP+G F V ++ F+G  CK   I++ I G++VA  D +++A+S  WI F  +  +SI G
Sbjct: 69  IVPKGRFLVGNLVFHGNECKQAPISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYG 128

Query: 126 GIIDGQGTPLWNCKHSR-KSCPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVH 185
           GI+D QGT LW CK++   +CP GA+SL  +   N+ I+GL+SINSQ F IV++   NV+
Sbjct: 129 GILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVN 188

Query: 186 MSRVNVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGH 245
           +  V V A  +SPNTDGIHV+ S  V I NS IG GDDCISIGPG++N++I+TI CGPGH
Sbjct: 189 IDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGH 248

Query: 246 GISIGSLGIEAEEDGVHNVTVKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVK 305
           GISIGSLG   EE GV NVTV +  F GT NGVRIK+WG+ SN FA N+ FQHI M  VK
Sbjct: 249 GISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVK 308

Query: 306 NPIIIDQNYCPHLKDCPGQDSGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLID 365
           NPIIIDQ+YC H K CP Q+SGVKVS V YEDI GTS TE+A+  DCS    CTG+ + D
Sbjct: 309 NPIIIDQHYCLH-KPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDD 368

Query: 366 INLTYENHIAKASCKNAEGTTSGVVEPSSCL 392
           +NL   +  A+ASC NA G+ + VV  + CL
Sbjct: 369 VNLVSVHRPAQASCDNANGSANDVVPFTPCL 398

[Close]

BLAST of CmoCh19G003390 vs. Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 7.3e-75
Identity = 153/371 (41.24%), Postives = 229/371 (61.73%), Query Frame = 1


Query: 26  TFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGPCKNNAI 85
           +F+I  LGA  + KTD++  +Q AWA  C  +   TI +P+G F V  + F GPCK + +
Sbjct: 40  SFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGPLNFTGPCKGD-V 99

Query: 86  TVLIDGTLVASSDIQVLANSSSWISFNHINGLSITG-GIIDGQGTPLW--NCKHSRKSCP 145
           T+ ++G L+A++D+    +  +WI    ++ L ITG G +DGQG  +W  N    +  C 
Sbjct: 100 TIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYDCK 159

Query: 146 IGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHVQQ 205
           I   SL ++   N  ++G++ +NS+ F + M +C+++ +  VNV A GDSPNTDGIH+  
Sbjct: 160 ILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGD 219

Query: 206 SSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVTVK 265
           SS VTI N+ IG GDDCISIGPGTS + I  +TCGPGHGISIGSLG   +E  V ++ VK
Sbjct: 220 SSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVK 279

Query: 266 SSTFTGTQNGVRIKSWGRPSNGF-ATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQDS 325
             T   T NGVRIK++   ++   A+ +H+++I M++   PIIID  YCP+        S
Sbjct: 280 DCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGAS 339

Query: 326 GVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYE--NHIAKASCKNAEG 385
            V V +VT+++I GTS+T  A+   C+    CTG+ + D+N+ Y   N+   A CKNA+G
Sbjct: 340 KVTVKDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKG 399

Query: 386 TTSGVVEPSSC 391
           +  G ++  +C
Sbjct: 400 SAKGCLKELAC 409

[Close]

BLAST of CmoCh19G003390 vs. Swiss-Prot
Match: PGLR1_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 4.7e-74
Identity = 151/371 (40.70%), Postives = 226/371 (60.92%), Query Frame = 1


Query: 26  TFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGPCKNNAI 85
           +F+I  LGA  + KTD++  +Q AWA  C  +   TI +P+G F V  + F GPCK + +
Sbjct: 40  SFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGD-V 99

Query: 86  TVLIDGTLVASSDIQVLANSSSWISFNHINGLSITG-GIIDGQGTPLWNCKHSRKS--CP 145
           T+ +DG L+A++D+    +  +WI    ++ L ITG G +DGQG  +W+     K   C 
Sbjct: 100 TIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCK 159

Query: 146 IGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHVQQ 205
           I   SL ++   N  ++G++ +NS+ F + M RC+++ +  V V A GDSPNTDGIH+  
Sbjct: 160 ILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGD 219

Query: 206 SSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVTVK 265
           SS +TI N+ IG GDDCISIGPGTS + I  +TCGPGHGISIGSLG   +E  V ++ VK
Sbjct: 220 SSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVK 279

Query: 266 SSTFTGTQNGVRIKSWGRPSNGF-ATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQDS 325
             T   T  GVRIK++   ++    + +H+++I M++  NPI ID  YCP+        S
Sbjct: 280 DCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGAS 339

Query: 326 GVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYE--NHIAKASCKNAEG 385
            V V +VT+++I GTS+T  A+   C+    CTG+ + D+N+ Y   N+   A C NA+G
Sbjct: 340 KVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKG 399

Query: 386 TTSGVVEPSSC 391
           +T G ++  +C
Sbjct: 400 STKGCLKELAC 409

[Close]

BLAST of CmoCh19G003390 vs. Swiss-Prot
Match: PGLR2_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 6.2e-74
Identity = 152/371 (40.97%), Postives = 224/371 (60.38%), Query Frame = 1


Query: 26  TFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGPCKNNAI 85
           +F+I  LGA  + KTD++  +Q AWA  C  +   TI +P+G F V  + F GPCK + +
Sbjct: 40  SFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGD-V 99

Query: 86  TVLIDGTLVASSDIQVLANSSSWISFNHINGLSITG-GIIDGQGTPLWNCKHSRKS--CP 145
           T+ +DG L+A++D+       +WI    ++ L ITG G +DGQG  +W+     K   C 
Sbjct: 100 TIQVDGNLLATTDLSQYKEHGNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCK 159

Query: 146 IGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHVQQ 205
           I   SL ++   N  ++G++ +NS+ F + M +C+N+ +  V V A GDSPNTDGIH+  
Sbjct: 160 ILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGD 219

Query: 206 SSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVTVK 265
           SS +TI N+ IG GDDCISIGPGTS + I  +TCGPGHGISIGSLG   +E  V ++ VK
Sbjct: 220 SSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVK 279

Query: 266 SSTFTGTQNGVRIKSWGRPSNGF-ATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQDS 325
             T   T  GVRIK++   ++    + +H+++I M++  NPI ID  YCP+        S
Sbjct: 280 DCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGAS 339

Query: 326 GVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYE--NHIAKASCKNAEG 385
            V V +VT+++I GTS+T  AI   C+    CTG  + D+N+ Y   N+   A C NA+G
Sbjct: 340 KVTVKDVTFKNITGTSSTPEAISLLCTAKVPCTGATMDDVNVEYSGTNNKTMAICTNAKG 399

Query: 386 TTSGVVEPSSC 391
           +T G ++  +C
Sbjct: 400 STKGCLKELAC 409

[Close]

BLAST of CmoCh19G003390 vs. TrEMBL
Match: A0A0A0KN91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409610 PE=3 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 1.5e-148
Identity = 258/386 (66.84%), Postives = 309/386 (80.05%), Query Frame = 1


Query: 7   LPVVAFLDVTVMFVQAAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPE 66
           LP+++ L + +    AA  TFNI++LGA  D KTDAS   Q AWA  C SSEPATIYVP 
Sbjct: 7   LPLLSLLFLFLNHGLAAGSTFNIVSLGAIADGKTDASHAFQEAWANACGSSEPATIYVPN 66

Query: 67  GIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDG 126
           G F+++S  F+GPCKNNAIT++I+GTL+ASS+IQVLA S +WI+F  INGLSI GG+IDG
Sbjct: 67  GAFYIQSGNFSGPCKNNAITIVINGTLIASSNIQVLAQSQAWIAFRQINGLSIYGGVIDG 126

Query: 127 QGTPLWNCKHSRKSCPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNV 186
           QG  LWNCKHS KSCP GA +L+I+  +NVN+NGLSSINSQ+F IV+  C+NV +  VNV
Sbjct: 127 QGIGLWNCKHSGKSCPDGATNLEISHAQNVNVNGLSSINSQMFNIVVYGCENVQIQGVNV 186

Query: 187 LAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGS 246
            +AGDSPNTDGIHVQQS +V I +++IG GDDCISIGPGT+N+W+E I CGPGHGISIGS
Sbjct: 187 SSAGDSPNTDGIHVQQSLNVNISSTSIGTGDDCISIGPGTTNLWMENIKCGPGHGISIGS 246

Query: 247 LGIEAEEDGVHNVTVKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIID 306
           LG + EE GV NVTV ++TFTGTQNGVRIKSWGRPSN FA  + FQHI   NV NPI+ID
Sbjct: 247 LGRQVEEAGVENVTVTTATFTGTQNGVRIKSWGRPSNAFANKILFQHIRFYNVNNPILID 306

Query: 307 QNYCPHLKDCPGQDSGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYE 366
           QNYCP+ + CPGQ SGVKVS+VTY+D+ GTSA+E+AI FDCSPTN CTG+ L DI LTY 
Sbjct: 307 QNYCPNNQGCPGQASGVKVSDVTYQDVNGTSASEVAINFDCSPTNPCTGITLEDIQLTYN 366

Query: 367 NHIAKASCKNAEGTTSGVVEPSSCLA 393
           N I KASCKNA GT SG ++P SCLA
Sbjct: 367 NQIPKASCKNARGTASGPLQPRSCLA 392

[Close]

BLAST of CmoCh19G003390 vs. TrEMBL
Match: Q1A230_PRUDO (Polygalacturonase OS=Prunus domestica subsp. insititia PE=2 SV=1)

HSP 1 Score: 508.1 bits (1307), Expect = 1.2e-140
Identity = 239/371 (64.42%), Postives = 295/371 (79.51%), Query Frame = 1


Query: 22  AAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGPCK 81
           A  +T+N+ +LGAK D KTD++    +AWAK C S  P  IYVP G FF+R V F+GPCK
Sbjct: 23  ATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVFSGPCK 82

Query: 82  NNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDGQGTPLWNCKHSR-KS 141
           NNAIT  I GTLVA SD QV+ N+++WI F+H+NG++I+GGI+DGQGT LW CK S  KS
Sbjct: 83  NNAITFRIAGTLVAPSDYQVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKASNGKS 142

Query: 142 CPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHV 201
           CP GA +L  +D  N+ ++GL+S+NSQ+F IV+N CQNV M  V V A+G+SPNTDGIHV
Sbjct: 143 CPSGATTLSFSDSNNIVVSGLASVNSQMFHIVINDCQNVQMQGVKVSASGNSPNTDGIHV 202

Query: 202 QQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVT 261
           Q SS VTILNS I  GDDC+SIGPGTSN+WIE++ CGPGHGISIGSLG E EE GV NVT
Sbjct: 203 QMSSGVTILNSKIATGDDCVSIGPGTSNLWIESVACGPGHGISIGSLGKEQEEAGVQNVT 262

Query: 262 VKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQD 321
           VK+ TFTGTQNG+RIKSWGRPS GFA N+ FQH TM NV+NPI+IDQ+YCP  K CPGQ 
Sbjct: 263 VKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQV 322

Query: 322 SGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYENHIAKASCKNAEGT 381
           SGV++S+VTYEDI GTSATE+A+KFDCSP + C+ + L D+ LTY+N  A++SC +A+GT
Sbjct: 323 SGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCSEIKLEDVKLTYKNQAAESSCSHADGT 382

Query: 382 TSGVVEPSSCL 392
           T GVV+P+SCL
Sbjct: 383 TEGVVQPTSCL 393

[Close]

BLAST of CmoCh19G003390 vs. TrEMBL
Match: F6KPP9_PRUAR (Endopolygalacturonase OS=Prunus armeniaca GN=PG PE=2 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 7.7e-140
Identity = 239/371 (64.42%), Postives = 295/371 (79.51%), Query Frame = 1


Query: 22  AAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGPCK 81
           A  +T+N+ +LGAK D KTD++    +AWAK C S  P  IYVP G FF+R V F+GPCK
Sbjct: 23  ATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVFSGPCK 82

Query: 82  NNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDGQGTPLWNCKHSR-KS 141
           NNAIT  I GTLVA SD +V+ N+++WI F+H+NG++I+GGI+DGQGT LW CK S  +S
Sbjct: 83  NNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKASHGES 142

Query: 142 CPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHV 201
           CP GA +L  +D  N+ ++GL+S+NSQ+F IV+N CQNV M  V V A+G+SPNTDGIHV
Sbjct: 143 CPSGATTLSFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGIHV 202

Query: 202 QQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVT 261
           Q SS VTILNS I  GDDCISIGPGTSN+WIE++ CGPGHGISIGSLG E EE GV NVT
Sbjct: 203 QMSSGVTILNSKIATGDDCISIGPGTSNLWIESVACGPGHGISIGSLGKEQEEAGVQNVT 262

Query: 262 VKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQD 321
           VK+ TFTGTQNG+RIKSWGRPS GFA N+ FQH TM NV+NPIIIDQ+YCP  K CPGQ 
Sbjct: 263 VKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIIIDQHYCPDNKGCPGQV 322

Query: 322 SGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYENHIAKASCKNAEGT 381
           SGV++S+VTYEDI GTSATE+A+KFDCSP + C+ + L D+ LTY+N  A++SC +A+GT
Sbjct: 323 SGVQISDVTYEDIHGTSATEVAVKFDCSPEHPCSEIKLEDVKLTYKNQAAESSCSHADGT 382

Query: 382 TSGVVEPSSCL 392
           T GVV+P+SCL
Sbjct: 383 TGGVVQPTSCL 393

[Close]

BLAST of CmoCh19G003390 vs. TrEMBL
Match: A0A0N9M5I6_PRUAR (Polygalacturonase OS=Prunus armeniaca GN=PG1 PE=2 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 2.2e-139
Identity = 238/371 (64.15%), Postives = 296/371 (79.78%), Query Frame = 1


Query: 22  AAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGPCK 81
           A  +T+N+ +LGAK D KTD++    +AWAK C S  P+ IYVP G FF+R V F+GPCK
Sbjct: 23  ATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPSVIYVPAGTFFLRDVVFSGPCK 82

Query: 82  NNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDGQGTPLWNCKHSR-KS 141
           +NAIT  I GTLVA SD +V+ N+++WI F+H+NG++I+GGI+DGQGT LW CK S  +S
Sbjct: 83  SNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKASHGES 142

Query: 142 CPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHV 201
           CP GA +L  +D  N+ ++GL+S+NSQ+F IV+N CQNV M  V V A+G+SPNTDGIHV
Sbjct: 143 CPSGATTLSFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGIHV 202

Query: 202 QQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVT 261
           Q SS VTILNS I  GDDCISIGPGTSN+WIE++ CGPGHGISIGSLG E EE GV NVT
Sbjct: 203 QMSSGVTILNSKIATGDDCISIGPGTSNLWIESVACGPGHGISIGSLGKEQEEAGVQNVT 262

Query: 262 VKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQD 321
           VK+ TFTGTQNG+RIKSWGRPS GFA N+ FQH TM NV+NPIIIDQ+YCP  K CPGQ 
Sbjct: 263 VKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIIIDQHYCPDNKGCPGQV 322

Query: 322 SGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYENHIAKASCKNAEGT 381
           SGV++S+VTYEDI GTSATE+A+KFDCSP + C+ + L D+ LTY+N  A++SC +A+GT
Sbjct: 323 SGVQISDVTYEDIHGTSATEVAVKFDCSPEHPCSEIKLEDVKLTYKNQAAESSCSHADGT 382

Query: 382 TSGVVEPSSCL 392
           T GVV+P+SCL
Sbjct: 383 TGGVVQPTSCL 393

[Close]

BLAST of CmoCh19G003390 vs. TrEMBL
Match: O82586_PRUPE (Endo-polygalacturonase OS=Prunus persica GN=Endo-PG PE=2 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 5.0e-139
Identity = 237/371 (63.88%), Postives = 294/371 (79.25%), Query Frame = 1


Query: 22  AAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGPCK 81
           A  +T+N+ +LGAK D KTD++    +AWAK C S  P  IYVP G FF+R V F+GPCK
Sbjct: 23  ATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVFSGPCK 82

Query: 82  NNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDGQGTPLWNCKHSR-KS 141
           NNAIT  I GTLVA SD +V+ N+++WI F+H+NG++I+GGI+DGQGT LW CK S  +S
Sbjct: 83  NNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKASHGES 142

Query: 142 CPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHV 201
           CP GA +L  +D  N+ ++GL+S+NSQ+F IV+N CQNV M  V V A+G+SPNTDGIHV
Sbjct: 143 CPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGIHV 202

Query: 202 QQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVT 261
           Q SS VTILNS I  GDDC+SIGPGTSN+WIE + CGPGHGISIGSLG E EE GV NVT
Sbjct: 203 QMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVT 262

Query: 262 VKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQD 321
           VK+ TFTGTQNG+RIKSWGRPS GFA N+ FQH TM NV+NPI+IDQ+YCP  K CPGQ 
Sbjct: 263 VKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQV 322

Query: 322 SGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYENHIAKASCKNAEGT 381
           SGV++S+VTYEDI GTSATE+A+KFDCSP + C+ + L D+ LTY+N  A++SC +A+GT
Sbjct: 323 SGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCSEIKLEDVKLTYKNQAAESSCSHADGT 382

Query: 382 TSGVVEPSSCL 392
           T GVV+P+SCL
Sbjct: 383 TEGVVQPTSCL 393

[Close]

BLAST of CmoCh19G003390 vs. TAIR10
Match: AT3G59850.1 (AT3G59850.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 440.7 bits (1132), Expect = 1.2e-123
Identity = 210/387 (54.26%), Postives = 276/387 (71.32%), Query Frame = 1


Query: 6   LLPVVAFLDVTVMFVQAAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVP 65
           LL V+ FL   +    ++  T+NI++ GAKPD KTD++      WAK C S +P TI VP
Sbjct: 5   LLIVLLFL---LSVSSSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVP 64

Query: 66  EGIFFVRSVRFNGP-CKNNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGII 125
           +G F +RS+ F+G  CK  ++T  I GTLVA SD +V+   + WI F H++G+S+ GG++
Sbjct: 65  KGRFLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVL 124

Query: 126 DGQGTPLWNCKHSRKSCPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRV 185
           D QG  LW+CK S K+CP GA S+     +NV I+GL+S+NSQ+F + +N C NV +  V
Sbjct: 125 DAQGASLWSCKKSGKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGV 184

Query: 186 NVLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISI 245
            V A G+SPNTDGIHVQ SS V+ILNS I  GDDC+SIGPGT+ +WIE + CGPGHGISI
Sbjct: 185 KVSADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISI 244

Query: 246 GSLGIEAEEDGVHNVTVKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPII 305
           GSLG E+ E GV N+TVK++TFTGT+NGVRIKSW RPSNGFA N+ FQH  M+NV+NPI+
Sbjct: 245 GSLGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIV 304

Query: 306 IDQNYCPHLKDCPGQDSGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLT 365
           IDQNYCP  ++CP Q SG+K+S+V + DI GTSATE+ +K DCS    CTG+ + D+ LT
Sbjct: 305 IDQNYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLT 364

Query: 366 YENHIAKASCKNAEGTTSGVVEPSSCL 392
           Y N  A   C +A G+ +G   P+SCL
Sbjct: 365 YRNKPATTDCSHAGGSEAGFQRPNSCL 388

[Close]

BLAST of CmoCh19G003390 vs. TAIR10
Match: AT2G43870.1 (AT2G43870.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 434.1 bits (1115), Expect = 1.1e-121
Identity = 203/367 (55.31%), Postives = 265/367 (72.21%), Query Frame = 1


Query: 26  TFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGP-CKNNA 85
           ++N+++ GAKPD KTDA+      W   C SS P TI VP+G F +RSV F+G  CK   
Sbjct: 20  SYNVLSFGAKPDGKTDATKAFMAVWQTACASSRPVTIVVPKGRFLLRSVTFDGSKCKPKP 79

Query: 86  ITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDGQGTPLWNCKHSRKSCPIG 145
           +T  IDGTLVA +D +V+ N   WI F H++G+++ GG++D +G  LW+CK S K+CP G
Sbjct: 80  VTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGVLDARGASLWDCKKSGKNCPSG 139

Query: 146 ARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHVQQSS 205
           A ++      NV ++GL+S+NSQ+F +V+N C NV +  V VLAAG+SPNTDGIHVQ SS
Sbjct: 140 ATTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVKVLAAGNSPNTDGIHVQSSS 199

Query: 206 DVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVTVKSS 265
            V+I N+ I  GDDC+SIGPGT+ +WIE + CGPGHGISIGSLG ++ E GV NVTVK+ 
Sbjct: 200 SVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKDSVESGVQNVTVKTV 259

Query: 266 TFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQDSGVK 325
           TFTGT NGVRIKSW RPS+GFA N+ FQH  M+NV+NPIIIDQNYCP   DCP Q SG+K
Sbjct: 260 TFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIIDQNYCPD-HDCPRQVSGIK 319

Query: 326 VSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYENHIAKASCKNAEGTTSGV 385
           +S+V + DI GTSATE+ +K DCS    CTG+ L D+ LTY+N  A ++C +A G  +G 
Sbjct: 320 ISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTYQNKPAASACTHAGGIEAGF 379

Query: 386 VEPSSCL 392
            +P +CL
Sbjct: 380 FQP-NCL 384

[Close]

BLAST of CmoCh19G003390 vs. TAIR10
Match: AT1G05650.1 (AT1G05650.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 392.1 bits (1006), Expect = 4.8e-109
Identity = 190/387 (49.10%), Postives = 259/387 (66.93%), Query Frame = 1


Query: 6   LLPVVAFLDVTVMFVQAAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVP 65
           +  ++ F+DV+     +A + FN+++ GAKPD  TD++     AW   C S+  AT+ VP
Sbjct: 11  IFTLLTFIDVS----SSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVVP 70

Query: 66  EGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIID 125
            G F ++ + F GPCK+  IT  + GT+VA  D +   NS SWI FN +N  S+ GG  D
Sbjct: 71  TGTFLLKVITFGGPCKSK-ITFQVTGTVVAPEDYRTFGNSGSWILFNKVNRFSLVGGTFD 130

Query: 126 GQGTPLWNCKHSRKSCPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVN 185
            +G+  W+C+ S ++CP G RS+  N  K+V I+G+ S+NSQ+  + +N C NV +  + 
Sbjct: 131 ARGSGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVAVRNIR 190

Query: 186 VLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIG 245
           ++A GDSPNTDG  VQ S+ VT+  S +  GDDC++IG GT N  I  + CGPGHG+SIG
Sbjct: 191 LVAPGDSPNTDGFTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGVSIG 250

Query: 246 SLGIEAEEDGVHNVTVKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIII 305
           SL  +  EDGV NVTV SS FTG+QNGVRIKSW RPS GF  NV FQ++ M NV+NPIII
Sbjct: 251 SLAKQLNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNVQNPIII 310

Query: 306 DQNYCPHLKDCPGQDSGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTY 365
           DQNYCP  + CP + SGVK+++VTY++I+GTSAT+ A+K  CS +N CTG+ L DI LTY
Sbjct: 311 DQNYCPSNQGCPTEHSGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLTY 370

Query: 366 ENHI-AKASCKNAEGTTSGVVEPSSCL 392
                A + C NA G   GV++P+SCL
Sbjct: 371 NKGTPATSLCFNAVGKNLGVIQPTSCL 392

[Close]

BLAST of CmoCh19G003390 vs. TAIR10
Match: AT1G05660.1 (AT1G05660.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 392.1 bits (1006), Expect = 4.8e-109
Identity = 191/387 (49.35%), Postives = 260/387 (67.18%), Query Frame = 1


Query: 6   LLPVVAFLDVTVMFVQAAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVP 65
           L  ++ F+DV++    +A   FN+++ GAKPD  TD++     AW   C S+  AT+ VP
Sbjct: 11  LFTLLTFIDVSI----SASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVP 70

Query: 66  EGIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIID 125
           +G F ++ + F GPCK+  IT  + GT++A  D +   NS  WI FN +N  S+ GG  D
Sbjct: 71  KGTFLLKVITFGGPCKSK-ITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTFD 130

Query: 126 GQGTPLWNCKHSRKSCPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVN 185
            +    W+C+ S ++CP G RS+  N  K+V I+G+ S+NSQ+  + +N C NV +  V 
Sbjct: 131 ARANGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVK 190

Query: 186 VLAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIG 245
           ++A G+SPNTDG HVQ S+ VT   S +  GDDC++IGPGT N+ I  + CGPGHG+SIG
Sbjct: 191 LVAPGNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSIG 250

Query: 246 SLGIEAEEDGVHNVTVKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIII 305
           SL  E +EDGV NVTV SS FTG+QNGVRIKSW RPSNGF   V FQ + M NV+NPIII
Sbjct: 251 SLAKELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPIII 310

Query: 306 DQNYCPHLKDCPGQDSGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTY 365
           DQNYCP  + CP + SGVK+S+VTY++I+GTSAT+ A+K  CS ++ CTG+ L DI LTY
Sbjct: 311 DQNYCPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTY 370

Query: 366 ENHI-AKASCKNAEGTTSGVVEPSSCL 392
                A + C NA G + GV++P+SCL
Sbjct: 371 NKGTPATSFCFNAVGKSLGVIQPTSCL 392

[Close]

BLAST of CmoCh19G003390 vs. TAIR10
Match: AT2G43880.1 (AT2G43880.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 386.7 bits (992), Expect = 2.0e-107
Identity = 193/385 (50.13%), Postives = 251/385 (65.19%), Query Frame = 1


Query: 10  VAFLDVTVMFV---QAAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPE 69
           + F  + + F+     A  +FN+   GA+ D + DA+    TAW+  C S   A +YVP 
Sbjct: 11  IIFFSINIFFLIKSSHAMPSFNVQRYGARGDGRADATKSFLTAWSLACGSRARAMVYVPR 70

Query: 70  GIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDG 129
           G + V+++ F GPCKN  IT   DGTLVA ++   + NS  WI F  +N +S+ GG ID 
Sbjct: 71  GTYLVKNLVFWGPCKN-IITFKNDGTLVAPANYWDIGNSGYWILFAKVNRISVYGGTIDA 130

Query: 130 QGTPLWNCKHSRKSCPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNV 189
           +G   W+C+     CP GARS+  +   NV ++GLSS NSQ   + ++   NV +  V +
Sbjct: 131 RGAGYWSCRKKGSHCPQGARSISFSWCNNVLLSGLSSFNSQNMHVTVHHSSNVRIENVRI 190

Query: 190 LAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGS 249
            A   SPNTDGIHVQ SS VTI    I  GDDCI++  G+ N+WIE + CGPGHGISIGS
Sbjct: 191 RAPSGSPNTDGIHVQSSSGVTISGGTIATGDDCIALSQGSRNIWIERVNCGPGHGISIGS 250

Query: 250 LGIEAEEDGVHNVTVKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIID 309
           LG  A E+GV NVTV SS FT TQNGVRIK+W RPS GF  NV F+++ M+NV+NP+IID
Sbjct: 251 LGDYANEEGVQNVTVTSSVFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMNNVENPVIID 310

Query: 310 QNYCPHLKDCPGQDSGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYE 369
           QNYCP+ K CP Q SGVK+S VT+ +IKGTS T IA+K DCS +NHCTGL L DI LTY 
Sbjct: 311 QNYCPNGKGCPRQSSGVKISGVTFANIKGTSTTPIAMKLDCSGSNHCTGLRLQDIKLTYM 370

Query: 370 NHIAKASCKNAEGTTSGVVEPSSCL 392
              + + C+NA G  SGV+ P +C+
Sbjct: 371 RRSSASYCRNAHGRASGVMVPRNCM 394

[Close]

BLAST of CmoCh19G003390 vs. NCBI nr
Match: gi|659121214|ref|XP_008460550.1| (PREDICTED: polygalacturonase-like [Cucumis melo])

HSP 1 Score: 547.0 bits (1408), Expect = 3.3e-152
Identity = 261/371 (70.35%), Postives = 303/371 (81.67%), Query Frame = 1


Query: 22  AAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGPCK 81
           AA  TFNI++LGAK D  TDASP  Q AWA  C SSEPATIYVP G F+V S  F GPCK
Sbjct: 22  AAGSTFNIVSLGAKADGMTDASPAFQEAWANACGSSEPATIYVPNGAFYVHSGNFTGPCK 81

Query: 82  NNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDGQGTPLWNCKHSRKSC 141
           NNAIT+LI+GTL+ASS+IQVLA S +WI+F HINGLSI GG+IDGQG  LWNCKHS +SC
Sbjct: 82  NNAITILINGTLMASSNIQVLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCKHSGQSC 141

Query: 142 PIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHVQ 201
           P GA SL+I D +NVN+NGLSS+NSQ+F IV+  CQNV +  VNV +A DSPNTDGIHVQ
Sbjct: 142 PDGATSLEIFDSQNVNVNGLSSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPNTDGIHVQ 201

Query: 202 QSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVTV 261
           QS +V I NSNIG GDDCISIGPGT+N+W+E I CGPGHGISIGSLG +AEE GV NVTV
Sbjct: 202 QSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGISIGSLGKQAEEAGVQNVTV 261

Query: 262 KSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQDS 321
            ++TF GTQNGVRIKSWGRPS+GFAT + FQHI   NV NPI IDQNYCPH + CPGQ S
Sbjct: 262 TTATFRGTQNGVRIKSWGRPSDGFATKILFQHILFYNVSNPIFIDQNYCPHQQSCPGQAS 321

Query: 322 GVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYENHIAKASCKNAEGTT 381
           GVK+S+VTY+DI GTSATE+AI FDCSP+N CTG++L DINL Y + I +ASC+NA+GT 
Sbjct: 322 GVKISDVTYQDINGTSATEVAINFDCSPSNPCTGIHLEDINLNYNDQIPQASCENAQGTA 381

Query: 382 SGVVEPSSCLA 393
           SG ++P SCLA
Sbjct: 382 SGPLQPRSCLA 392

[Close]

BLAST of CmoCh19G003390 vs. NCBI nr
Match: gi|449445220|ref|XP_004140371.1| (PREDICTED: polygalacturonase [Cucumis sativus])

HSP 1 Score: 534.3 bits (1375), Expect = 2.2e-148
Identity = 258/386 (66.84%), Postives = 309/386 (80.05%), Query Frame = 1


Query: 7   LPVVAFLDVTVMFVQAAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPE 66
           LP+++ L + +    AA  TFNI++LGA  D KTDAS   Q AWA  C SSEPATIYVP 
Sbjct: 7   LPLLSLLFLFLNHGLAAGSTFNIVSLGAIADGKTDASHAFQEAWANACGSSEPATIYVPN 66

Query: 67  GIFFVRSVRFNGPCKNNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDG 126
           G F+++S  F+GPCKNNAIT++I+GTL+ASS+IQVLA S +WI+F  INGLSI GG+IDG
Sbjct: 67  GAFYIQSGNFSGPCKNNAITIVINGTLIASSNIQVLAQSQAWIAFRQINGLSIYGGVIDG 126

Query: 127 QGTPLWNCKHSRKSCPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNV 186
           QG  LWNCKHS KSCP GA +L+I+  +NVN+NGLSSINSQ+F IV+  C+NV +  VNV
Sbjct: 127 QGIGLWNCKHSGKSCPDGATNLEISHAQNVNVNGLSSINSQMFNIVVYGCENVQIQGVNV 186

Query: 187 LAAGDSPNTDGIHVQQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGS 246
            +AGDSPNTDGIHVQQS +V I +++IG GDDCISIGPGT+N+W+E I CGPGHGISIGS
Sbjct: 187 SSAGDSPNTDGIHVQQSLNVNISSTSIGTGDDCISIGPGTTNLWMENIKCGPGHGISIGS 246

Query: 247 LGIEAEEDGVHNVTVKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIID 306
           LG + EE GV NVTV ++TFTGTQNGVRIKSWGRPSN FA  + FQHI   NV NPI+ID
Sbjct: 247 LGRQVEEAGVENVTVTTATFTGTQNGVRIKSWGRPSNAFANKILFQHIRFYNVNNPILID 306

Query: 307 QNYCPHLKDCPGQDSGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYE 366
           QNYCP+ + CPGQ SGVKVS+VTY+D+ GTSA+E+AI FDCSPTN CTG+ L DI LTY 
Sbjct: 307 QNYCPNNQGCPGQASGVKVSDVTYQDVNGTSASEVAINFDCSPTNPCTGITLEDIQLTYN 366

Query: 367 NHIAKASCKNAEGTTSGVVEPSSCLA 393
           N I KASCKNA GT SG ++P SCLA
Sbjct: 367 NQIPKASCKNARGTASGPLQPRSCLA 392

[Close]

BLAST of CmoCh19G003390 vs. NCBI nr
Match: gi|87242603|gb|ABD33834.1| (polygalacturonase [Prunus domestica subsp. insititia])

HSP 1 Score: 508.1 bits (1307), Expect = 1.7e-140
Identity = 239/371 (64.42%), Postives = 295/371 (79.51%), Query Frame = 1


Query: 22  AAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGPCK 81
           A  +T+N+ +LGAK D KTD++    +AWAK C S  P  IYVP G FF+R V F+GPCK
Sbjct: 23  ATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVFSGPCK 82

Query: 82  NNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDGQGTPLWNCKHSR-KS 141
           NNAIT  I GTLVA SD QV+ N+++WI F+H+NG++I+GGI+DGQGT LW CK S  KS
Sbjct: 83  NNAITFRIAGTLVAPSDYQVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKASNGKS 142

Query: 142 CPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHV 201
           CP GA +L  +D  N+ ++GL+S+NSQ+F IV+N CQNV M  V V A+G+SPNTDGIHV
Sbjct: 143 CPSGATTLSFSDSNNIVVSGLASVNSQMFHIVINDCQNVQMQGVKVSASGNSPNTDGIHV 202

Query: 202 QQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVT 261
           Q SS VTILNS I  GDDC+SIGPGTSN+WIE++ CGPGHGISIGSLG E EE GV NVT
Sbjct: 203 QMSSGVTILNSKIATGDDCVSIGPGTSNLWIESVACGPGHGISIGSLGKEQEEAGVQNVT 262

Query: 262 VKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQD 321
           VK+ TFTGTQNG+RIKSWGRPS GFA N+ FQH TM NV+NPI+IDQ+YCP  K CPGQ 
Sbjct: 263 VKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQV 322

Query: 322 SGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYENHIAKASCKNAEGT 381
           SGV++S+VTYEDI GTSATE+A+KFDCSP + C+ + L D+ LTY+N  A++SC +A+GT
Sbjct: 323 SGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCSEIKLEDVKLTYKNQAAESSCSHADGT 382

Query: 382 TSGVVEPSSCL 392
           T GVV+P+SCL
Sbjct: 383 TEGVVQPTSCL 393

[Close]

BLAST of CmoCh19G003390 vs. NCBI nr
Match: gi|645241809|ref|XP_008227253.1| (PREDICTED: polygalacturonase [Prunus mume])

HSP 1 Score: 506.5 bits (1303), Expect = 4.9e-140
Identity = 239/371 (64.42%), Postives = 295/371 (79.51%), Query Frame = 1


Query: 22  AAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGPCK 81
           A  +T+N+ +LGAK D KTD++    +AWAK C S  P  IYVP G FF+R V F+GPCK
Sbjct: 23  ATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVFSGPCK 82

Query: 82  NNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDGQGTPLWNCKHSR-KS 141
           NNAIT  I GTLVA SD +V+ N+++WI F+H+NG++I+GGI+DGQGT LW CK S  KS
Sbjct: 83  NNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKASNGKS 142

Query: 142 CPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHV 201
           CP GA +L  +D  N+ ++GL+S+NSQ+F IV+N CQNV M  V V A+G+SPNTDGIHV
Sbjct: 143 CPSGATTLSFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGIHV 202

Query: 202 QQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVT 261
           Q SS VTILNS I  GDDC+SIGPGTSN+WIE++ CGPGHGISIGSLG E EE GV NVT
Sbjct: 203 QMSSGVTILNSKIATGDDCVSIGPGTSNLWIESVACGPGHGISIGSLGKEQEEAGVQNVT 262

Query: 262 VKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQD 321
           VK+ TFTGTQNG+RIKSWGRPS GFA N+ FQH TM NV+NPIIIDQ+YCP  K CPGQ 
Sbjct: 263 VKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIIIDQHYCPDNKGCPGQV 322

Query: 322 SGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYENHIAKASCKNAEGT 381
           SGV++S+VTYEDI GTSATE+A+KFDCSP + C+ + L D+ LTY+N  A++SC +A+GT
Sbjct: 323 SGVQISDVTYEDIHGTSATEVAVKFDCSPEHPCSEIKLEDVKLTYKNQAAESSCSHADGT 382

Query: 382 TSGVVEPSSCL 392
           T GVV+P+SCL
Sbjct: 383 TEGVVQPTSCL 393

[Close]

BLAST of CmoCh19G003390 vs. NCBI nr
Match: gi|315143143|gb|ADT82706.1| (endopolygalacturonase [Prunus armeniaca])

HSP 1 Score: 505.4 bits (1300), Expect = 1.1e-139
Identity = 239/371 (64.42%), Postives = 295/371 (79.51%), Query Frame = 1


Query: 22  AAELTFNIITLGAKPDEKTDASPMLQTAWAKVCDSSEPATIYVPEGIFFVRSVRFNGPCK 81
           A  +T+N+ +LGAK D KTD++    +AWAK C S  P  IYVP G FF+R V F+GPCK
Sbjct: 23  ATPVTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVFSGPCK 82

Query: 82  NNAITVLIDGTLVASSDIQVLANSSSWISFNHINGLSITGGIIDGQGTPLWNCKHSR-KS 141
           NNAIT  I GTLVA SD +V+ N+++WI F+H+NG++I+GGI+DGQGT LW CK S  +S
Sbjct: 83  NNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKASHGES 142

Query: 142 CPIGARSLQINDGKNVNINGLSSINSQLFGIVMNRCQNVHMSRVNVLAAGDSPNTDGIHV 201
           CP GA +L  +D  N+ ++GL+S+NSQ+F IV+N CQNV M  V V A+G+SPNTDGIHV
Sbjct: 143 CPSGATTLSFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGIHV 202

Query: 202 QQSSDVTILNSNIGNGDDCISIGPGTSNMWIETITCGPGHGISIGSLGIEAEEDGVHNVT 261
           Q SS VTILNS I  GDDCISIGPGTSN+WIE++ CGPGHGISIGSLG E EE GV NVT
Sbjct: 203 QMSSGVTILNSKIATGDDCISIGPGTSNLWIESVACGPGHGISIGSLGKEQEEAGVQNVT 262

Query: 262 VKSSTFTGTQNGVRIKSWGRPSNGFATNVHFQHITMDNVKNPIIIDQNYCPHLKDCPGQD 321
           VK+ TFTGTQNG+RIKSWGRPS GFA N+ FQH TM NV+NPIIIDQ+YCP  K CPGQ 
Sbjct: 263 VKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIIIDQHYCPDNKGCPGQV 322

Query: 322 SGVKVSEVTYEDIKGTSATEIAIKFDCSPTNHCTGLNLIDINLTYENHIAKASCKNAEGT 381
           SGV++S+VTYEDI GTSATE+A+KFDCSP + C+ + L D+ LTY+N  A++SC +A+GT
Sbjct: 323 SGVQISDVTYEDIHGTSATEVAVKFDCSPEHPCSEIKLEDVKLTYKNQAAESSCSHADGT 382

Query: 382 TSGVVEPSSCL 392
           T GVV+P+SCL
Sbjct: 383 TGGVVQPTSCL 393

The following BLAST results are available for this feature:

BLAST of CmoCh19G003390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PGLR_PRUPE	2.1e-138	63.07	Polygalacturonase OS=Prunus persica PE=2 SV=1	[more]
PGLR6_ARATH	5.2e-105	51.66	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 S...	[more]
PGLR3_MAIZE	7.3e-75	41.24	Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1	[more]
PGLR1_MAIZE	4.7e-74	40.70	Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1	[more]
PGLR2_MAIZE	6.2e-74	40.97	Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1	[more]

BLAST of CmoCh19G003390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN91_CUCSA	1.5e-148	66.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409610 PE=3 SV=1	[more]
Q1A230_PRUDO	1.2e-140	64.42	Polygalacturonase OS=Prunus domestica subsp. insititia PE=2 SV=1	[more]
F6KPP9_PRUAR	7.7e-140	64.42	Endopolygalacturonase OS=Prunus armeniaca GN=PG PE=2 SV=1	[more]
A0A0N9M5I6_PRUAR	2.2e-139	64.15	Polygalacturonase OS=Prunus armeniaca GN=PG1 PE=2 SV=1	[more]
O82586_PRUPE	5.0e-139	63.88	Endo-polygalacturonase OS=Prunus persica GN=Endo-PG PE=2 SV=1	[more]

BLAST of CmoCh19G003390 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G59850.1	1.2e-123	54.26	Pectin lyase-like superfamily protein	[more]
AT2G43870.1	1.1e-121	55.31	Pectin lyase-like superfamily protein	[more]
AT1G05650.1	4.8e-109	49.10	Pectin lyase-like superfamily protein	[more]
AT1G05660.1	4.8e-109	49.35	Pectin lyase-like superfamily protein	[more]
AT2G43880.1	2.0e-107	50.13	Pectin lyase-like superfamily protein	[more]

BLAST of CmoCh19G003390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121214\|ref\|XP_008460550.1\|	3.3e-152	70.35	PREDICTED: polygalacturonase-like [Cucumis melo]	[more]
gi\|449445220\|ref\|XP_004140371.1\|	2.2e-148	66.84	PREDICTED: polygalacturonase [Cucumis sativus]	[more]
gi\|87242603\|gb\|ABD33834.1\|	1.7e-140	64.42	polygalacturonase [Prunus domestica subsp. insititia]	[more]
gi\|645241809\|ref\|XP_008227253.1\|	4.9e-140	64.42	PREDICTED: polygalacturonase [Prunus mume]	[more]
gi\|315143143\|gb\|ADT82706.1\|	1.1e-139	64.42	endopolygalacturonase [Prunus armeniaca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000743	Glyco_hydro_28
IPR006626	PbH1
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G003390.1	CmoCh19G003390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 54..379 score: 1.8
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 153..175 score: 4800.0coord: 176..202 score: 410.0coord: 203..224 score: 170.0coord: 256..277 score: 2.6coord: 286..307 score: 22
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 14..396 score: 3.96E
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 17..401 score: 3.1E
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 1..426 score: 1.6E
None	No IPR available	PANTHER	PTHR31375:SF2	POLYGALACTURONASE/PECTINASE	coord: 1..426 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G003390	CmaCh19G003150	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G003390	CmaCh19G003290	Cucurbita maxima (Rimu)	cmacmoB510
CmoCh19G003390	CmaCh19G003500	Cucurbita maxima (Rimu)	cmacmoB511

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G003390	Cucurbita maxima (Rimu)	cmacmoB147
CmoCh19G003390	Watermelon (Charleston Gray)	cmowcgB444
CmoCh19G003390	Watermelon (Charleston Gray)	cmowcgB452
CmoCh19G003390	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G003390	Bottle gourd (USVL1VR-Ls)	cmolsiB466
CmoCh19G003390	Watermelon (97103) v2	cmowmbB532
CmoCh19G003390	Cucurbita moschata (Rifu)	cmocmoB109