CmaCh19G003500 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh19G003500
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPolygalacturonase
LocationCma_Chr19 : 3697244 .. 3699134 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCAGCTGCTGAATTTACATTCAATATTGTTACTCTCGGAGCTAAGCCCGATGAAAAGACCGATGCCTCACCTGTGCTTCAAACGGCATGAGCTAAGGCCTGTGACTCATCTGAACCAGCCACTATTTACGTTCCCGATGGTATATTCTCCGTTCAAAGTGTGAGATTTAATGGGCCTTGTAAGAACAATGCTATTACTGTTCTCATTGAGGGAACTCTTGTGGCTTCCTCGAACATTCAAGTTTTAGCTAATTCGAGTTCTTGGATTTTATTTAATCACATAAATGGGCTATCCATTACTGGCGATATTATTGATGGGCAAGGAACTCCCCTATGGAATTGTAAACACTCAGGGAAGAGTTGCCCCATTGGAGCCCGGGTATGCAGAATTTAAGTTGGCTCCATATAAAAAAAATTTGAAAATTTTTCTTTAACTGAAATTTTAATGAAAATGACTGGATTAATACAATATTATTTTAAATTTTTACTAATTCTCGCTTTTGATTGTTTTGAATTGATAGTCTTCAAATAAATGATGGAAAGAATTTGAACATCAATGGATTATTATCTTCAATTAACAGCCAATTGTTCAGCATTGTAATGAATCGGTGCCAAAACGTGCATATGACAAGAGTGAATGTCTTGGCTGCATGCGATAGTCCAAACACTGATGGCATCCATGTGCGACAATCATCAGATGTGACCATCCTCAACTCAAACATTAGAAACGGTGACAACTGCATCTCCATCGGTCCAGGCACATCCAACATGTGGATCGAAAGTATTACATGTGGACCTGGACATGGAATCAGGTAACTAAAGATAGATTAGGATGAACATGTTTAGAAATGTTTTTTAAAGGGTTTAAATAAATTTGTCACATTAATTTTTAGAAGATAATCTAAATGTTAAATTAAATTTGAATGATTAAAATATATTCTAAAGTTATTTTGAACGTGAGAAAAATGATTTAAATTATTTTAAAATTATTTTGGATAAAAATAGTTATATAATATATTAGGTTAGAGTGAGGAAATTAAAGGTTAGAAAGCATTTGGTATTTTGTTGAATGTGTTTTTAGCATTGGGAGCTTAGGGATGGAGGCTGAGGAGGATGGAGTGCATAACGTTACAGTGAAATCATCTACATTCACGGGGACTCAGAATGGAGTAAGGATTAAGTCTTGGGGATGACCAAGCAATGGATTCGCTACAAACGTTCATTTTCAACACATTATTATGAATAATGTGAAAAACCCAATCATAATTGATCAAAATTACTGTCGTGGTCAAGTATATTTCCTCATTAATCTCATACATTGTTAATTTTTTTCTAATTATATTTAAACTTAAATTTGATGAATAATACAATTTAAATTTTAAATTTTATAAATAATTGATTTATTTTATCTTTAATTGTTTGAAATTTGTTTGTGTTTAAAATGGGTGCTAAATTATTAGTATTATTTTTTGGTACATTAAATTAGTTTTATAGGTAATAATTTAGGGATGCTATTACTTTTGATGTCTTAAAGTGGTAGGAAGCTTTTATGATTTTATTTTTTAATTTATCCAAAATATCTAATATCATTGAAGATAATTGCTCTAACTTATAATATACTATCTAAAAAATCTAAGACTATGCTTGATTTATATCTTATTATTTAATTCCTAATTTATATTTGGTTTTAGAATATAGTTTCATTGTTCTTCTTTATTTTAATAGGATTCTGAAGTTAAAGTTAGCGAAGTGACATACGAAGACATCAAGAGAACTTCAGCCACTAAAATAGCAATCAATTTTGATTGTAGTCCAACAAATCATTGCACTGGATTACGCTTGATAGACATAAAGCTAACTTACGAGAATCACATCGCTAAAGCTTCA

mRNA sequence

ATGCCTCAGCTGCTGAATTTACATTCAATATTGTTACTCTCGGAGCTAAGCCCGATGAAAAGACCGATGCCTCACCTGTGCTTCAAACGGCATGAGCTAAGGCCTGTGACTCATCTGAACCAGCCACTATTTACGTTCCCGATGAACAATGCTATTACTGTTCTCATTGAGGGAACTCTTGTGGCTTCCTCGAACATTCAAGTTTTAGCTAATTCGAGTTCTTGGATTTTATTTAATCACATAAATGGGCTATCCATTACTGGCGATATTATTGATGGGCAAGGAACTCCCCTATGGAATTGTAAACACTCAGGGAAGAGTTGCCCCATTGGAGCCCGGAATTTGAACATCAATGGATTATTATCTTCAATTAACAGCCAATTGTTCAGCATTGTAATGAATCGGTGCCAAAACGTGCATATGACAAGAGTGAATGTCTTGGCTGCATGCGATAGTCCAAACACTGATGGCATCCATGTGCGACAATCATCAGATGTGACCATCCTCAACTCAAACATTAGAAACGGTGACAACTGCATCTCCATCGGTCCAGGCACATCCAACATGTGGATCGAAAGTATTACATGTGGACCTGGACATGGAATCAGCAATGGATTCGCTACAAACGTTCATTTTCAACACATTATTATGAATAATGTGAAAAACCCAATCATAATTGATCAAAATTACTGTCGTGGTCAAGATTCTGAAGTTAAAGTTAGCGAAGTGACATACGAAGACATCAAGAGAACTTCAGCCACTAAAATAGCAATCAATTTTGATTGTAGTCCAACAAATCATTGCACTGGATTACGCTTGATAGACATAAAGCTAACTTACGAGAATCACATCGCTAAAGCTTCA

Coding sequence (CDS)

ATGCCTCAGCTGCTGAATTTACATTCAATATTGTTACTCTCGGAGCTAAGCCCGATGAAAAGACCGATGCCTCACCTGTGCTTCAAACGGCATGAGCTAAGGCCTGTGACTCATCTGAACCAGCCACTATTTACGTTCCCGATGAACAATGCTATTACTGTTCTCATTGAGGGAACTCTTGTGGCTTCCTCGAACATTCAAGTTTTAGCTAATTCGAGTTCTTGGATTTTATTTAATCACATAAATGGGCTATCCATTACTGGCGATATTATTGATGGGCAAGGAACTCCCCTATGGAATTGTAAACACTCAGGGAAGAGTTGCCCCATTGGAGCCCGGAATTTGAACATCAATGGATTATTATCTTCAATTAACAGCCAATTGTTCAGCATTGTAATGAATCGGTGCCAAAACGTGCATATGACAAGAGTGAATGTCTTGGCTGCATGCGATAGTCCAAACACTGATGGCATCCATGTGCGACAATCATCAGATGTGACCATCCTCAACTCAAACATTAGAAACGGTGACAACTGCATCTCCATCGGTCCAGGCACATCCAACATGTGGATCGAAAGTATTACATGTGGACCTGGACATGGAATCAGCAATGGATTCGCTACAAACGTTCATTTTCAACACATTATTATGAATAATGTGAAAAACCCAATCATAATTGATCAAAATTACTGTCGTGGTCAAGATTCTGAAGTTAAAGTTAGCGAAGTGACATACGAAGACATCAAGAGAACTTCAGCCACTAAAATAGCAATCAATTTTGATTGTAGTCCAACAAATCATTGCACTGGATTACGCTTGATAGACATAAAGCTAACTTACGAGAATCACATCGCTAAAGCTTCA

Protein sequence

MPQLLNLHSILLLSELSPMKRPMPHLCFKRHELRPVTHLNQPLFTFPMNNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTPLWNCKHSGKSCPIGARNLNINGLLSSINSQLFSIVMNRCQNVHMTRVNVLAACDSPNTDGIHVRQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGISNGFATNVHFQHIIMNNVKNPIIIDQNYCRGQDSEVKVSEVTYEDIKRTSATKIAINFDCSPTNHCTGLRLIDIKLTYENHIAKAS
Homology
[Close]
BLAST of CmaCh19G003500 vs. Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.3e-70
Identity = 147/305 (48.20%), Postives = 193/305 (63.28%), Query Frame = 1 

Query: 39  LNQPLFTFPM-NNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTP 98
           L   +F+ P  NNAIT  I GTLVA S+ +V+ N+++WI F+H+NG++I+G I+DGQGT 
Sbjct: 72  LRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTA 131

Query: 99  LWNCKHS-GKSCPIGA--------RNLNINGLLSSINSQLFSIVMNRCQNVHMTRVNVLA 158
           LW CK   G+SCP GA         N+ ++GL +S+NSQ+F IV+N  QNV M  V V  
Sbjct: 132 LWACKACHGESCPSGATTLGFSDSNNIVVSGL-ASLNSQMFHIVINDFQNVQMQGVRVSR 191

Query: 159 ACDSPNTDGIHVRQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGIS----- 218
           + +SPNTDGIHV+ SS VTILNS I  GD+C+SIGPGTSN+WIE + CGPGHGIS     
Sbjct: 192 SGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLG 251

Query: 219 ----------------------------------NGFATNVHFQHIIMNNVKNPIIIDQN 278
                                              GFA N+ FQH  M NV+NPI+IDQ+
Sbjct: 252 KEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQH 311

Query: 279 YCR------GQDSEVKVSEVTYEDIKRTSATKIAINFDCSPTNHCTGLRLIDIKLTYENH 289
           YC       GQ S V++S+VTYEDI  TSAT++A+ FDCSP + C  ++L D+KLTY+N 
Sbjct: 312 YCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTYKNQ 371

[Close]
BLAST of CmaCh19G003500 vs. Swiss-Prot
Match: PGLR6_ARATH (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.0e-48
Identity = 119/289 (41.18%), Postives = 164/289 (56.75%), Query Frame = 1 

Query: 52  ITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTPLWNCKHSG-KSCPI 111
           I++ I G++VA  + +++A+S  WI F  +  +SI G I+D QGT LW CK++G  +CP 
Sbjct: 92  ISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPT 151

Query: 112 GARNLNINGL-------LSSINSQLFSIVMNRCQNVHMTRVNVLAACDSPNTDGIHVRQS 171
           GA++L  +G        L+SINSQ F IV++   NV++  V V A  +SPNTDGIHV  S
Sbjct: 152 GAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESS 211

Query: 172 SDVTILNSNIRNGDNCISIGPGTSNMWI-------------------------ESITC-- 231
             V I NS I  GD+CISIGPG++N++I                         +++T   
Sbjct: 212 HSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSN 271

Query: 232 ----GPGHGI--------SNGFATNVHFQHIIMNNVKNPIIIDQNYCRG-----QDSEVK 289
               G  +G+        SN FA N+ FQHI M  VKNPIIIDQ+YC       Q+S VK
Sbjct: 272 VDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLHKPCPKQESGVK 331

[Close]
BLAST of CmaCh19G003500 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.4e-33
Identity = 91/265 (34.34%), Postives = 134/265 (50.57%), Query Frame = 1 

Query: 72  SSSWILFNHINGLSITGD-IIDGQGTPLW---NCKHSGKSCPIGARNLNINGL------- 131
           S  W+ F  I+GL+++G   +DGQG   W   NC  +  +C   A NL  + L       
Sbjct: 85  SDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKN-PNCKHAAMNLRFDFLKHAMVRD 144

Query: 132 LSSINSQLFSIVMNRCQNVHMTRVNVLAACDSPNTDGIHVRQSSDVTILNSNIRNGDNCI 191
           ++S+NS++F I +  C+++    V V A   S NTDGIHV  S  VTI N+ I  GD+CI
Sbjct: 145 ITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCI 204

Query: 192 SIGPGTSNMWIESITCGPGH---------------------------GISNGF------- 251
           SIGPG+ N+ I  + CGPGH                           G  NG        
Sbjct: 205 SIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPN 264

Query: 252 -----ATNVHFQHIIMNNVKNPIIIDQNYC------RGQDSEVKVSEVTYEDIKRTSATK 281
                AT++ FQ + MNNV+NP+I+DQ YC      R   S +K+S + + +I+ TS  K
Sbjct: 265 SPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKLSNINFNNIRGTSTGK 324

[Close]
BLAST of CmaCh19G003500 vs. Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-32
Identity = 102/319 (31.97%), Postives = 151/319 (47.34%), Query Frame = 1 

Query: 29  KRHELRPVTHLNQPLFTFPMNNAITVLIEGTLVASSN-IQVLANSSSWILFNHINGLSIT 88
           K + +RP++      F+ P  + +T+ I GT+ AS +      +   W++F+ +  L + 
Sbjct: 129 KNYLVRPIS------FSGPCKSGLTMQIYGTIEASDDRSDYRKDGRHWLVFDSVQNLRVE 188

Query: 89  GD-IIDGQGTPLWN----------CKHSG------KSCPIGARNLNINGLLSSINSQLFS 148
           G   I+G G   W           CK +       KS  +  +NL I       N+Q   
Sbjct: 189 GGGTINGNGKIWWQNSCKTNKALPCKDAPTALTFYKSKHVIVKNLKIE------NAQQIH 248

Query: 149 IVMNRCQNVHMTRVNVLAACDSPNTDGIHVRQSSDVTILNSNIRNGDNCISIGPGTSNMW 208
           +  + C NV  + + V A  +SPNTDGIHV  + ++ I +  I  GD+CISI  G+  + 
Sbjct: 249 VSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNGSRKVR 308

Query: 209 IESITCGPGHGIS--------------------------------------NGFATNVHF 268
           +  ITCGPGHGIS                                      +G A+N+ F
Sbjct: 309 VNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKF 368

Query: 269 QHIIMNNVKNPIIIDQNY------CRGQDSEVKVSEVTYEDIKRTSATKIAINFDCSPTN 286
           Q++ M+NV+NPIIIDQNY      C+ Q S V+V  V Y++IK T A+ +AI FDCS   
Sbjct: 369 QNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCASNVAITFDCSKRF 428

[Close]
BLAST of CmaCh19G003500 vs. Swiss-Prot
Match: ADPG2_ARATH (Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 1.0e-31
Identity = 98/285 (34.39%), Postives = 139/285 (48.77%), Query Frame = 1 

Query: 45  TFPMNNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGD---IIDGQGTPLW-- 104
           T P N+ +TV I GTL AS       + S WI+F+ +N LS+ G    ++DG G   W  
Sbjct: 119 TGPCNSILTVQIFGTLSASQKRSDYKDISKWIMFDGVNNLSVDGGDTGVVDGNGETWWQN 178

Query: 105 NCKHS-GKSCPIGARNLNINGLLSSI-------NSQLFSIVMNRCQNVHMTRVNVLAACD 164
           +CK +  K C      L      S I       N+Q   I + +C NV ++ V V A  D
Sbjct: 179 SCKRNKAKPCTKAPTALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQVSNVVVTAPAD 238

Query: 165 SPNTDGIHVRQSSDVTILNSNIRNGDNCISIGPGTSNM---------------------- 224
           SPNTDGIH+  + ++ +  S I  GD+CISI  G+ N+                      
Sbjct: 239 SPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDN 298

Query: 225 ---WIESITC------GPGHGI-------SNGFATNVHFQHIIMNNVKNPIIIDQNY--- 274
              ++  +T       G  +G+        +G A+N+ FQ+I M+NVKNPIIIDQ+Y   
Sbjct: 299 SKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVKNPIIIDQDYCDK 358

[Close]
BLAST of CmaCh19G003500 vs. TrEMBL
Match: A0A0A0KN91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409610 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 6.0e-79
Identity = 163/293 (55.63%), Postives = 195/293 (66.55%), Query Frame = 1 

Query: 49  NNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTPLWNCKHSGKSC 108
           NNAIT++I GTL+ASSNIQVLA S +WI F  INGLSI G +IDGQG  LWNCKHSGKSC
Sbjct: 82  NNAITIVINGTLIASSNIQVLAQSQAWIAFRQINGLSIYGGVIDGQGIGLWNCKHSGKSC 141

Query: 109 PIGARNL--------NINGLLSSINSQLFSIVMNRCQNVHMTRVNVLAACDSPNTDGIHV 168
           P GA NL        N+NGL SSINSQ+F+IV+  C+NV +  VNV +A DSPNTDGIHV
Sbjct: 142 PDGATNLEISHAQNVNVNGL-SSINSQMFNIVVYGCENVQIQGVNVSSAGDSPNTDGIHV 201

Query: 169 RQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGIS----------------- 228
           +QS +V I +++I  GD+CISIGPGT+N+W+E+I CGPGHGIS                 
Sbjct: 202 QQSLNVNISSTSIGTGDDCISIGPGTTNLWMENIKCGPGHGISIGSLGRQVEEAGVENVT 261

Query: 229 ----------------------NGFATNVHFQHIIMNNVKNPIIIDQNYCR------GQD 288
                                 N FA  + FQHI   NV NPI+IDQNYC       GQ 
Sbjct: 262 VTTATFTGTQNGVRIKSWGRPSNAFANKILFQHIRFYNVNNPILIDQNYCPNNQGCPGQA 321

[Close]
BLAST of CmaCh19G003500 vs. TrEMBL
Match: G8FU52_PYRPY (Polygalacturonase OS=Pyrus pyrifolia GN=PG2 PE=2 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 154/304 (50.66%), Postives = 197/304 (64.80%), Query Frame = 1 

Query: 39  LNQPLFTFPM-NNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTP 98
           L   +F+ P  NNAIT  I GTLVA S+ QV+ N+ +W+LF H+NG++I+G ++DGQGT 
Sbjct: 78  LGNAVFSGPCKNNAITFRIAGTLVAPSDYQVIGNAGNWLLFQHVNGVTISGGVLDGQGTG 137

Query: 99  LWNCKHSGKSCPIGARNLN--------INGLLSSINSQLFSIVMNRCQNVHMTRVNVLAA 158
           LW+CK SGKSCP GA  L+        ++GL+S +NSQ+F IV+N CQNV M  V V AA
Sbjct: 138 LWDCKSSGKSCPSGATTLSFSNSNNVVVSGLIS-LNSQMFHIVVNGCQNVKMQGVKVNAA 197

Query: 159 CDSPNTDGIHVRQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGIS------ 218
            +SPNTDGIHV+ SS VTIL+S I  GD+C+S+GPGT+N+WIE++ CGPGHGIS      
Sbjct: 198 GNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISIGSLGK 257

Query: 219 ---------------------------------NGFATNVHFQHIIMNNVKNPIIIDQNY 278
                                             GFA ++ FQHIIM NV+NPI+IDQNY
Sbjct: 258 DQQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIIMTNVQNPIVIDQNY 317

Query: 279 CR------GQDSEVKVSEVTYEDIKRTSATKIAINFDCSPTNHCTGLRLIDIKLTYENHI 289
           C       GQ S VKVS+VTY+DI  TSAT++A+ FDCS    C G+RL D+KLTY N  
Sbjct: 318 CPNDKGCPGQASGVKVSDVTYQDIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLTYNNQA 377

[Close]
BLAST of CmaCh19G003500 vs. TrEMBL
Match: S5MMR8_9ROSA (Polygalacturonase 2 OS=Pyrus x bretschneideri GN=PG2 PE=2 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 154/304 (50.66%), Postives = 198/304 (65.13%), Query Frame = 1 

Query: 39  LNQPLFTFPM-NNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTP 98
           L+  +F+ P  NNAIT  I GTLVA S+ QV+ N+ +W+LF H+NG++I+G ++DGQGT 
Sbjct: 78  LSNAVFSGPCKNNAITFRIAGTLVAPSDYQVIGNAGNWLLFQHVNGVTISGGVLDGQGTG 137

Query: 99  LWNCKHSGKSCPIGARNLN--------INGLLSSINSQLFSIVMNRCQNVHMTRVNVLAA 158
           LW+CK SGKSCP GA  L+        ++GL+S +NSQ+F IV+N CQNV M  V V AA
Sbjct: 138 LWDCKSSGKSCPSGATTLSFSNSNNVVVSGLVS-LNSQMFHIVVNGCQNVKMQGVKVNAA 197

Query: 159 CDSPNTDGIHVRQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGIS------ 218
            +SPNTDGIHV+ SS VTIL+S I  GD+C+S+GPGT+N+WIE++ CGPGHGIS      
Sbjct: 198 GNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISIGSLGK 257

Query: 219 ---------------------------------NGFATNVHFQHIIMNNVKNPIIIDQNY 278
                                             GFA ++ FQHI+M NV+NPIIIDQNY
Sbjct: 258 DQQEAGVQNVTVKTITFTGTENGVRIKSWGRPSTGFARSILFQHIVMTNVQNPIIIDQNY 317

Query: 279 CR------GQDSEVKVSEVTYEDIKRTSATKIAINFDCSPTNHCTGLRLIDIKLTYENHI 289
           C       GQ S VKVS+VTY+DI  TSAT++A+ FDCS    C G+RL D+KLTY N  
Sbjct: 318 CPNDKGCPGQASGVKVSDVTYQDIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLTYNNQA 377

[Close]
BLAST of CmaCh19G003500 vs. TrEMBL
Match: Q68UW1_PYRCO (Polygalacturonase OS=Pyrus communis GN=pg2 PE=2 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 5.8e-74
Identity = 152/304 (50.00%), Postives = 197/304 (64.80%), Query Frame = 1 

Query: 39  LNQPLFTFPM-NNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTP 98
           L   +F+ P  NNAIT  I GTLVA S+ +V+ N+ +W+LF H+NG++I+G ++DGQGT 
Sbjct: 78  LGNAVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAGNWLLFQHVNGVTISGGVLDGQGTG 137

Query: 99  LWNCKHSGKSCPIGARNLN--------INGLLSSINSQLFSIVMNRCQNVHMTRVNVLAA 158
           LW+CK SGKSCP GA  L+        ++GL+S +NSQ+F IV+N CQNV M  V V AA
Sbjct: 138 LWDCKSSGKSCPSGATTLSFSNSNNVVVSGLIS-LNSQMFHIVVNGCQNVKMQGVKVNAA 197

Query: 159 CDSPNTDGIHVRQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGIS------ 218
            +SPNTDGIHV+ SS VTIL+S I  GD+C+S+GPGT+N+WIE++ CGPGHGIS      
Sbjct: 198 GNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISIGSLGK 257

Query: 219 ---------------------------------NGFATNVHFQHIIMNNVKNPIIIDQNY 278
                                             GFA ++ FQHI+M NV+NPI+IDQNY
Sbjct: 258 DQQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIVMTNVQNPIVIDQNY 317

Query: 279 CR------GQDSEVKVSEVTYEDIKRTSATKIAINFDCSPTNHCTGLRLIDIKLTYENHI 289
           C       GQ S VKVS+VTY+DI  TSAT++A+ FDCS    C G+RL D+KLTY N  
Sbjct: 318 CPNDKGCPGQASGVKVSDVTYQDIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLTYNNQA 377

[Close]
BLAST of CmaCh19G003500 vs. TrEMBL
Match: B9SSX1_RICCO (Polygalacturonase, putative OS=Ricinus communis GN=RCOM_1267820 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.9e-73
Identity = 151/293 (51.54%), Postives = 189/293 (64.51%), Query Frame = 1 

Query: 49  NNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTPLWNCKHSGKSC 108
           NNAI   I+GTLVA S+ +V+ N+  W+ F H+NG++I+G I+DGQG+ LW CK SGK+C
Sbjct: 84  NNAILFRIDGTLVAPSDYKVIGNAGYWLYFQHVNGVTISGGILDGQGSGLWACKASGKNC 143

Query: 109 PIGA--------RNLNINGLLSSINSQLFSIVMNRCQNVHMTRVNVLAACDSPNTDGIHV 168
           P GA        +N+ INGL S  NSQ+F IV+N CQNV +  V V A+ DSPNTDGIHV
Sbjct: 144 PSGATSLGFSNSKNIAINGLTSQ-NSQMFHIVINGCQNVKVQGVTVSASGDSPNTDGIHV 203

Query: 169 RQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGIS----------------- 228
           +QS  VTILNS IR GD+CISIGPG +N+WIE+I CGPGHGIS                 
Sbjct: 204 QQSGGVTILNSKIRTGDDCISIGPGATNLWIENIACGPGHGISIGSLGKDLQEAGVQNVT 263

Query: 229 ----------------------NGFATNVHFQHIIMNNVKNPIIIDQNYCR------GQD 288
                                 +GFA N+ FQH IM NV+NPI+IDQNYC       GQ+
Sbjct: 264 VKTVTFTGTQNGVRIKSWGRPSSGFARNILFQHAIMTNVQNPIVIDQNYCPDNKNCPGQE 323

[Close]
BLAST of CmaCh19G003500 vs. TAIR10
Match: AT2G43870.1 (AT2G43870.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 253.1 bits (645), Expect = 2.1e-67
Identity = 128/289 (44.29%), Postives = 179/289 (61.94%), Query Frame = 1 

Query: 52  ITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTPLWNCKHSGKSCPIG 111
           +T  I+GTLVA ++ +V+ N   WI F H++G+++ G ++D +G  LW+CK SGK+CP G
Sbjct: 80  VTFRIDGTLVAPADYRVIGNEDYWIFFQHLDGITVYGGVLDARGASLWDCKKSGKNCPSG 139

Query: 112 AR--------NLNINGLLSSINSQLFSIVMNRCQNVHMTRVNVLAACDSPNTDGIHVRQS 171
           A         N+ ++GL +S+NSQ+F +V+N C NV +  V VLAA +SPNTDGIHV+ S
Sbjct: 140 ATTIGFQSSSNVVVSGL-TSLNSQMFHVVINGCNNVKLQGVKVLAAGNSPNTDGIHVQSS 199

Query: 172 SDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGIS-------------------- 231
           S V+I N+ I  GD+C+SIGPGT+ +WIE++ CGPGHGIS                    
Sbjct: 200 SSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKDSVESGVQNVTVKT 259

Query: 232 -------------------NGFATNVHFQHIIMNNVKNPIIIDQNYCRGQD-----SEVK 289
                              +GFA N+ FQH +MNNV+NPIIIDQNYC   D     S +K
Sbjct: 260 VTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIIDQNYCPDHDCPRQVSGIK 319

[Close]
BLAST of CmaCh19G003500 vs. TAIR10
Match: AT3G59850.1 (AT3G59850.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 241.9 bits (616), Expect = 4.9e-64
Identity = 127/285 (44.56%), Postives = 175/285 (61.40%), Query Frame = 1 

Query: 51  AITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTPLWNCKHSGKSCPI 110
           ++T  I+GTLVA S+ +V+   + WILF H++G+S+ G ++D QG  LW+CK SGK+CP 
Sbjct: 81  SVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLDAQGASLWSCKKSGKNCPS 140

Query: 111 GA--------RNLNINGLLSSINSQLFSIVMNRCQNVHMTRVNVLAACDSPNTDGIHVRQ 170
           GA        RN+ I+GL +S+NSQ+F + +N C NV +  V V A  +SPNTDGIHV+ 
Sbjct: 141 GATSIGFQSSRNVVISGL-TSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHVQS 200

Query: 171 SSDVTILNSNIRNGDNCISIGPGTSNMWIESITC-------------------------- 230
           SS V+ILNS I  GD+C+SIGPGT+ +WIE++ C                          
Sbjct: 201 SSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKESVEVGVQNITVK 260

Query: 231 -----GPGHGI--------SNGFATNVHFQHIIMNNVKNPIIIDQNYCRG------QDSE 283
                G  +G+        SNGFA N+ FQH +MNNV+NPI+IDQNYC G      Q S 
Sbjct: 261 TATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYCPGNENCPNQVSG 320

[Close]
BLAST of CmaCh19G003500 vs. TAIR10
Match: AT2G43860.1 (AT2G43860.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 192.6 bits (488), Expect = 3.4e-49
Identity = 119/289 (41.18%), Postives = 164/289 (56.75%), Query Frame = 1 

Query: 52  ITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTPLWNCKHSG-KSCPI 111
           I++ I G++VA  + +++A+S  WI F  +  +SI G I+D QGT LW CK++G  +CP 
Sbjct: 92  ISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPT 151

Query: 112 GARNLNINGL-------LSSINSQLFSIVMNRCQNVHMTRVNVLAACDSPNTDGIHVRQS 171
           GA++L  +G        L+SINSQ F IV++   NV++  V V A  +SPNTDGIHV  S
Sbjct: 152 GAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESS 211

Query: 172 SDVTILNSNIRNGDNCISIGPGTSNMWI-------------------------ESITC-- 231
             V I NS I  GD+CISIGPG++N++I                         +++T   
Sbjct: 212 HSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSN 271

Query: 232 ----GPGHGI--------SNGFATNVHFQHIIMNNVKNPIIIDQNYCRG-----QDSEVK 289
               G  +G+        SN FA N+ FQHI M  VKNPIIIDQ+YC       Q+S VK
Sbjct: 272 VDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLHKPCPKQESGVK 331

[Close]
BLAST of CmaCh19G003500 vs. TAIR10
Match: AT2G43890.1 (AT2G43890.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 166.4 bits (420), Expect = 2.6e-41
Identity = 104/300 (34.67%), Postives = 152/300 (50.67%), Query Frame = 1 

Query: 44  FTFPMNNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTPLWNCKH 103
           F  P  + IT  I GT+VA S+ + L NS  WILF  +N +SI G  +D +G   W C+ 
Sbjct: 78  FRGPCRSRITFQIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIGGTLDARGASFWACRK 137

Query: 104 SGKSCPIGARNLNINGL-------LSSINSQLFSIVMNRCQNVHMTRVNVLAACDSPNTD 163
           SGKSCP+GAR++  N         L+SINSQ   +V+N C NV + +V ++A   SPNTD
Sbjct: 138 SGKSCPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIVRKVKLVAPDQSPNTD 197

Query: 164 GIHVRQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGISNGF---------A 223
           G+HV+ S+ VT+ +     GD+CISIGPGT N+++  + CGPGHGIS G           
Sbjct: 198 GLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHGISIGSLGRDANEAGV 257

Query: 224 TNVHFQHIIMNNVKNPIIIDQNYCRGQDSEVKVSEVTYEDI------------------- 283
            N+   + + +   N + I + + R   S   V  V ++++                   
Sbjct: 258 ENITLINSVFSGSDNGVRI-KTWAR--QSTGFVRNVLFQNLIMKNVQNPIIVDQNYCPSN 317

Query: 284 ----KRTSATKIA----------------INFDCSPTNHCTGLRLIDIKLTYENHIAKAS 289
               K+ S  KI+                + FDCS +N C  +RL DIKLT+    A ++
Sbjct: 318 QGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLTFNGRSATST 374

[Close]
BLAST of CmaCh19G003500 vs. TAIR10
Match: AT2G43880.1 (AT2G43880.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 161.8 bits (408), Expect = 6.4e-40
Identity = 103/292 (35.27%), Postives = 145/292 (49.66%), Query Frame = 1 

Query: 43  LFTFPMNNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTPLWNCK 102
           +F  P  N IT   +GTLVA +N   + NS  WILF  +N +S+ G  ID +G   W+C+
Sbjct: 79  VFWGPCKNIITFKNDGTLVAPANYWDIGNSGYWILFAKVNRISVYGGTIDARGAGYWSCR 138

Query: 103 HSGKSCPIGARNLNINGL-------LSSINSQLFSIVMNRCQNVHMTRVNVLAACDSPNT 162
             G  CP GAR+++ +         LSS NSQ   + ++   NV +  V + A   SPNT
Sbjct: 139 KKGSHCPQGARSISFSWCNNVLLSGLSSFNSQNMHVTVHHSSNVRIENVRIRAPSGSPNT 198

Query: 163 DGIHVRQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGISNG----FATNVH 222
           DGIHV+ SS VTI    I  GD+CI++  G+ N+WIE + CGPGHGIS G    +A    
Sbjct: 199 DGIHVQSSSGVTISGGTIATGDDCIALSQGSRNIWIERVNCGPGHGISIGSLGDYANEEG 258

Query: 223 FQHIIMNNVKNPIIIDQNYCR----GQDSEVKVSEVTYEDI------------------- 281
            Q++ + +  +     QN  R     + S   V+ V + ++                   
Sbjct: 259 VQNVTVTS--SVFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMNNVENPVIIDQNYCPNG 318

[Close]
BLAST of CmaCh19G003500 vs. NCBI nr
Match: gi|449445220|ref|XP_004140371.1| (PREDICTED: polygalacturonase [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 8.6e-79
Identity = 163/293 (55.63%), Postives = 195/293 (66.55%), Query Frame = 1 

Query: 49  NNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTPLWNCKHSGKSC 108
           NNAIT++I GTL+ASSNIQVLA S +WI F  INGLSI G +IDGQG  LWNCKHSGKSC
Sbjct: 82  NNAITIVINGTLIASSNIQVLAQSQAWIAFRQINGLSIYGGVIDGQGIGLWNCKHSGKSC 141

Query: 109 PIGARNL--------NINGLLSSINSQLFSIVMNRCQNVHMTRVNVLAACDSPNTDGIHV 168
           P GA NL        N+NGL SSINSQ+F+IV+  C+NV +  VNV +A DSPNTDGIHV
Sbjct: 142 PDGATNLEISHAQNVNVNGL-SSINSQMFNIVVYGCENVQIQGVNVSSAGDSPNTDGIHV 201

Query: 169 RQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGIS----------------- 228
           +QS +V I +++I  GD+CISIGPGT+N+W+E+I CGPGHGIS                 
Sbjct: 202 QQSLNVNISSTSIGTGDDCISIGPGTTNLWMENIKCGPGHGISIGSLGRQVEEAGVENVT 261

Query: 229 ----------------------NGFATNVHFQHIIMNNVKNPIIIDQNYCR------GQD 288
                                 N FA  + FQHI   NV NPI+IDQNYC       GQ 
Sbjct: 262 VTTATFTGTQNGVRIKSWGRPSNAFANKILFQHIRFYNVNNPILIDQNYCPNNQGCPGQA 321

[Close]
BLAST of CmaCh19G003500 vs. NCBI nr
Match: gi|659121214|ref|XP_008460550.1| (PREDICTED: polygalacturonase-like [Cucumis melo])

HSP 1 Score: 289.3 bits (739), Expect = 7.6e-75
Identity = 162/299 (54.18%), Postives = 198/299 (66.22%), Query Frame = 1 

Query: 44  FTFPM-NNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTPLWNCK 103
           FT P  NNAIT+LI GTL+ASSNIQVLA S +WI F HINGLSI G +IDGQG  LWNCK
Sbjct: 76  FTGPCKNNAITILINGTLMASSNIQVLAQSQAWIAFRHINGLSIYGGVIDGQGMGLWNCK 135

Query: 104 HSGKSCPIGA--------RNLNINGLLSSINSQLFSIVMNRCQNVHMTRVNVLAACDSPN 163
           HSG+SCP GA        +N+N+NGL SS+NSQ+F+IV+  CQNV +  VNV +A DSPN
Sbjct: 136 HSGQSCPDGATSLEIFDSQNVNVNGL-SSVNSQMFNIVVYGCQNVQIQGVNVSSASDSPN 195

Query: 164 TDGIHVRQSSDVTILNSNIRNGDNCISIGPGTSNMWIES--------------------- 223
           TDGIHV+QS +V I NSNI  GD+CISIGPGT+N+W+E+                     
Sbjct: 196 TDGIHVQQSLNVNISNSNIGTGDDCISIGPGTTNLWMENINCGPGHGISIGSLGKQAEEA 255

Query: 224 ----ITC------GPGHGI--------SNGFATNVHFQHIIMNNVKNPIIIDQNYCR--- 283
               +T       G  +G+        S+GFAT + FQHI+  NV NPI IDQNYC    
Sbjct: 256 GVQNVTVTTATFRGTQNGVRIKSWGRPSDGFATKILFQHILFYNVSNPIFIDQNYCPHQQ 315

Query: 284 ---GQDSEVKVSEVTYEDIKRTSATKIAINFDCSPTNHCTGLRLIDIKLTYENHIAKAS 289
              GQ S VK+S+VTY+DI  TSAT++AINFDCSP+N CTG+ L DI L Y + I +AS
Sbjct: 316 SCPGQASGVKISDVTYQDINGTSATEVAINFDCSPSNPCTGIHLEDINLNYNDQIPQAS 373

[Close]
BLAST of CmaCh19G003500 vs. NCBI nr
Match: gi|525327313|gb|AGR44470.1| (polygalacturonase 2 [Pyrus x bretschneideri])

HSP 1 Score: 287.7 bits (735), Expect = 2.2e-74
Identity = 154/304 (50.66%), Postives = 198/304 (65.13%), Query Frame = 1 

Query: 39  LNQPLFTFPM-NNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTP 98
           L+  +F+ P  NNAIT  I GTLVA S+ QV+ N+ +W+LF H+NG++I+G ++DGQGT 
Sbjct: 78  LSNAVFSGPCKNNAITFRIAGTLVAPSDYQVIGNAGNWLLFQHVNGVTISGGVLDGQGTG 137

Query: 99  LWNCKHSGKSCPIGARNLN--------INGLLSSINSQLFSIVMNRCQNVHMTRVNVLAA 158
           LW+CK SGKSCP GA  L+        ++GL+S +NSQ+F IV+N CQNV M  V V AA
Sbjct: 138 LWDCKSSGKSCPSGATTLSFSNSNNVVVSGLVS-LNSQMFHIVVNGCQNVKMQGVKVNAA 197

Query: 159 CDSPNTDGIHVRQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGIS------ 218
            +SPNTDGIHV+ SS VTIL+S I  GD+C+S+GPGT+N+WIE++ CGPGHGIS      
Sbjct: 198 GNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISIGSLGK 257

Query: 219 ---------------------------------NGFATNVHFQHIIMNNVKNPIIIDQNY 278
                                             GFA ++ FQHI+M NV+NPIIIDQNY
Sbjct: 258 DQQEAGVQNVTVKTITFTGTENGVRIKSWGRPSTGFARSILFQHIVMTNVQNPIIIDQNY 317

Query: 279 CR------GQDSEVKVSEVTYEDIKRTSATKIAINFDCSPTNHCTGLRLIDIKLTYENHI 289
           C       GQ S VKVS+VTY+DI  TSAT++A+ FDCS    C G+RL D+KLTY N  
Sbjct: 318 CPNDKGCPGQASGVKVSDVTYQDIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLTYNNQA 377

[Close]
BLAST of CmaCh19G003500 vs. NCBI nr
Match: gi|354549145|gb|AER27668.1| (polygalacturonase [Pyrus pyrifolia])

HSP 1 Score: 287.7 bits (735), Expect = 2.2e-74
Identity = 154/304 (50.66%), Postives = 197/304 (64.80%), Query Frame = 1 

Query: 39  LNQPLFTFPM-NNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTP 98
           L   +F+ P  NNAIT  I GTLVA S+ QV+ N+ +W+LF H+NG++I+G ++DGQGT 
Sbjct: 78  LGNAVFSGPCKNNAITFRIAGTLVAPSDYQVIGNAGNWLLFQHVNGVTISGGVLDGQGTG 137

Query: 99  LWNCKHSGKSCPIGARNLN--------INGLLSSINSQLFSIVMNRCQNVHMTRVNVLAA 158
           LW+CK SGKSCP GA  L+        ++GL+S +NSQ+F IV+N CQNV M  V V AA
Sbjct: 138 LWDCKSSGKSCPSGATTLSFSNSNNVVVSGLIS-LNSQMFHIVVNGCQNVKMQGVKVNAA 197

Query: 159 CDSPNTDGIHVRQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGIS------ 218
            +SPNTDGIHV+ SS VTIL+S I  GD+C+S+GPGT+N+WIE++ CGPGHGIS      
Sbjct: 198 GNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISIGSLGK 257

Query: 219 ---------------------------------NGFATNVHFQHIIMNNVKNPIIIDQNY 278
                                             GFA ++ FQHIIM NV+NPI+IDQNY
Sbjct: 258 DQQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIIMTNVQNPIVIDQNY 317

Query: 279 CR------GQDSEVKVSEVTYEDIKRTSATKIAINFDCSPTNHCTGLRLIDIKLTYENHI 289
           C       GQ S VKVS+VTY+DI  TSAT++A+ FDCS    C G+RL D+KLTY N  
Sbjct: 318 CPNDKGCPGQASGVKVSDVTYQDIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLTYNNQA 377

[Close]
BLAST of CmaCh19G003500 vs. NCBI nr
Match: gi|51507375|emb|CAH18935.1| (polygalacturonase [Pyrus communis])

HSP 1 Score: 285.8 bits (730), Expect = 8.4e-74
Identity = 152/304 (50.00%), Postives = 197/304 (64.80%), Query Frame = 1 

Query: 39  LNQPLFTFPM-NNAITVLIEGTLVASSNIQVLANSSSWILFNHINGLSITGDIIDGQGTP 98
           L   +F+ P  NNAIT  I GTLVA S+ +V+ N+ +W+LF H+NG++I+G ++DGQGT 
Sbjct: 78  LGNAVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAGNWLLFQHVNGVTISGGVLDGQGTG 137

Query: 99  LWNCKHSGKSCPIGARNLN--------INGLLSSINSQLFSIVMNRCQNVHMTRVNVLAA 158
           LW+CK SGKSCP GA  L+        ++GL+S +NSQ+F IV+N CQNV M  V V AA
Sbjct: 138 LWDCKSSGKSCPSGATTLSFSNSNNVVVSGLIS-LNSQMFHIVVNGCQNVKMQGVKVNAA 197

Query: 159 CDSPNTDGIHVRQSSDVTILNSNIRNGDNCISIGPGTSNMWIESITCGPGHGIS------ 218
            +SPNTDGIHV+ SS VTIL+S I  GD+C+S+GPGT+N+WIE++ CGPGHGIS      
Sbjct: 198 GNSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISIGSLGK 257

Query: 219 ---------------------------------NGFATNVHFQHIIMNNVKNPIIIDQNY 278
                                             GFA ++ FQHI+M NV+NPI+IDQNY
Sbjct: 258 DQQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIVMTNVQNPIVIDQNY 317

Query: 279 CR------GQDSEVKVSEVTYEDIKRTSATKIAINFDCSPTNHCTGLRLIDIKLTYENHI 289
           C       GQ S VKVS+VTY+DI  TSAT++A+ FDCS    C G+RL D+KLTY N  
Sbjct: 318 CPNDKGCPGQASGVKVSDVTYQDIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLTYNNQA 377

The following BLAST results are available for this feature:
BLAST of CmaCh19G003500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PGLR_PRUPE4.3e-7048.20Polygalacturonase OS=Prunus persica PE=2 SV=1[more]
PGLR6_ARATH6.0e-4841.18Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana GN=At2g43860 PE=2 S... [more]
PGLR2_PLAAC1.4e-3334.34Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1[more]
PGLR_ACTDE1.6e-3231.97Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1[more]
ADPG2_ARATH1.0e-3134.39Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2[more]
BLAST of CmaCh19G003500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KN91_CUCSA6.0e-7955.63Uncharacterized protein OS=Cucumis sativus GN=Csa_5G409610 PE=3 SV=1[more]
G8FU52_PYRPY1.5e-7450.66Polygalacturonase OS=Pyrus pyrifolia GN=PG2 PE=2 SV=1[more]
S5MMR8_9ROSA1.5e-7450.66Polygalacturonase 2 OS=Pyrus x bretschneideri GN=PG2 PE=2 SV=1[more]
Q68UW1_PYRCO5.8e-7450.00Polygalacturonase OS=Pyrus communis GN=pg2 PE=2 SV=1[more]
B9SSX1_RICCO2.9e-7351.54Polygalacturonase, putative OS=Ricinus communis GN=RCOM_1267820 PE=3 SV=1[more]
BLAST of CmaCh19G003500 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G43870.12.1e-6744.29 Pectin lyase-like superfamily protein[more]
AT3G59850.14.9e-6444.56 Pectin lyase-like superfamily protein[more]
AT2G43860.13.4e-4941.18 Pectin lyase-like superfamily protein[more]
AT2G43890.12.6e-4134.67 Pectin lyase-like superfamily protein[more]
AT2G43880.16.4e-4035.27 Pectin lyase-like superfamily protein[more]
BLAST of CmaCh19G003500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445220|ref|XP_004140371.1|8.6e-7955.63PREDICTED: polygalacturonase [Cucumis sativus][more]
gi|659121214|ref|XP_008460550.1|7.6e-7554.18PREDICTED: polygalacturonase-like [Cucumis melo][more]
gi|525327313|gb|AGR44470.1|2.2e-7450.66polygalacturonase 2 [Pyrus x bretschneideri][more]
gi|354549145|gb|AER27668.1|2.2e-7450.66polygalacturonase [Pyrus pyrifolia][more]
gi|51507375|emb|CAH18935.1|8.4e-7450.00polygalacturonase [Pyrus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000743Glyco_hydro_28
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004650 polygalacturonase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G003500.1CmaCh19G003500.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 39..205
score: 3.1
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 44..282
score: 1.71
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 41..282
score: 2.5
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 39..283
score: 4.8E
NoneNo IPR availablePANTHERPTHR31375:SF2POLYGALACTURONASE/PECTINASEcoord: 39..283
score: 4.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh19G003500CmoCh19G003600Cucurbita moschata (Rifu)cmacmoB508
CmaCh19G003500CmoCh19G003390Cucurbita moschata (Rifu)cmacmoB511
CmaCh19G003500CmoCh19G003700Cucurbita moschata (Rifu)cmacmoB513
CmaCh19G003500Cla97C09G176970Watermelon (97103) v2cmawmbB551
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh19G003500Cucurbita moschata (Rifu)cmacmoB510
CmaCh19G003500Cucurbita pepo (Zucchini)cmacpeB522
CmaCh19G003500Watermelon (97103) v2cmawmbB560
CmaCh19G003500Cucurbita maxima (Rimu)cmacmaB017