CmoCh19G002340 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh19G002340
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionF5D14.2 protein
LocationCmo_Chr19 : 1642744 .. 1646235 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTTATGGGAGATTGCACTGGCAACAGCCTATTTCTTGGGGCTCAAGCGAACATTTAAGCTCGTTTTGAAGACTCAGCGGCGCCTTGTTTCCCCCAACCACCCTCGGATTCGTCGATTTCTTCACCGGTATTTGCCCCTTCTTTCTTATGTTCTTCGTATTTTCTTGATCTTAATGCTTTTGAATGCTTCTGCGCATTGTCTCGTTCAACGCCTTTATTTTCGACTTGATTCTGTAGGATTTGAATTGAAGTCGCTATTTGATTAGTATGTGATGGATGTTTCAATGTCTTGTTTCGATGATGAAAGTTGTTCGATATCTTTTTGTTGAAAAAATCTGGAAGTTGAGGATGTTAGTGATATTGCATAAGACTTCCGTAACTATTGATCTGGATTTTGGAATGTTCATTCACAAATCAAGGATATGTGTCCTTGTGAAACATGATTTTGGGCTTAATATGCTGAACTTTCCATCGTTAATACTCTATCTTCTTGCTTTGCACCTGGGATTTGTTACAGAATCTAGCCCTTCGCATTAAACAAAATGTGAGATCCCATTTCGGTTGGGGAGGAGAATGAAACATTCTTTATAAAGGTGTGGAAATCTCTTCCTAACAGACGCGTCGTAAAAACCTGGAGGGGAATTCCAAAAGAGAAGGCCCAAAGAGGACAATATGTGCTAGCGGTGGGCTTAGGCTGTTACAAATGGTATTAGAGCCTGACACCGGGCGATGTGCCAATGAGGAGACTGAGCCTTGAAGGGGGTGGACACGAGGCAGTGTGCCAGTAAGGACGCTCGGCCTCGAAGGGGGTAGATTGGAAGGTCCCACATCAATTGGAGAATGAAATGAGTACCAACAAGGACGCTGGGCCCCGAAAGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAACATTTTTTATAAGGGTGTAGAAACCTCTCTCTAGCAAACACGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGTTGAGCCAGACACCGGGTGATGTGCCAGCGAGGAGGCTGAGCCCCGAAGGGGGTTGGACACAAGGCAGTGTGCCAGTAAGGACGTTGTGCTCTGAAGAGGGTGGATTGGGGGTTCCACATCAATTAGGGAATGGAACAAGTGCCAACGCTAGGCCCCAAAGAGGAGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCTTTAGCCATTTTAAAAACCTTGAGAGAAAGCCCAAAAGGGAAAGCCCAAAGAGGACAATGTCTACTAGCGGTGGATTTAGACTATTACACAAATCTCGTGGCATTGGTTGGTGAACTAATTATTCTTAATATGTTTTGTTTATGGTTACTGGATTGAAGCCTTTACATTTGCATTGTAGCATTCTGGTGGAATAGTTGGAGTTATTTATTGTATTGTATGGAAGATATACATGGTCTTAGATGTGGAATTTTTCACATGGGTCTTCATTTTCTCTGTAGAGTCGTAGAGTGTAGGCAATTGGGTGATTAAGTTAGTGAAGTTTTAACTGTTGACTGTTCGTACCTCCACCTCCTTTGGGGGCCATTGGGGGCCATGTCCTCGCTAGCACACCACCCAGTACCTGGCTCTGATACCATTTGTAACAGTCCAAGCCCACCACTAGCAGATATTGTCCTCTTTGGACTTTCTCTTTTCGGTTTTTCCTCAAGGTTTTAAAACGCGTCTATTAGGGAGAAGTTTTCACACCCTTACAAGAAATGCTTTGTTCTCCTCTCAAACCAATGTGGGATCTCATAATCCAATCCCCTTGGGGACCCAATGTCCTCGTTGGCCCACCACCCAATGCCTGACTCTGATACCATTTGTAACAGTTCAAGCCCACCGCTATTAGATATCGTTCTCTTTGGGCTTTCCCTTTTGAATTCCCCTCAAGGTTTTACAATGCATCTGTTAGGGAGAGGTTTCCACACACTTATAAAAAATGCTTCGTTCTCCTCTTCAACCGACGTGGGATCTCACACCTAAATATTTTAATTTGTTGCCTAACGTAAAGGGTTTGCTTCCCAAATTTTGGAGACGTCTTCAAACATGTCGAGTCCCTTCCATCGGGGCATATTTTGGGGTTGTTAGTGGTCCCCTTTTCCTTCACATTTTTCTAATGCTAAATTTGTTATTTAGAACAATGTCTAGAATATGGAACAAATTGCTGCAATGAAACCGATTCTCTTTCATATTGAGTGATGCAATGCCAAGCGTTTCACTACGTGAGATCCTACATCGGTTGGGGAGGAGAACGAAACACCGTTTATAAGGGTGTGGAAACCTTTCCCTAGCAGACGTGTTTTAAAAACTTTAAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTAAGCTATTACAAATGATATCAAAGCCAAACACCGGGTAATGTGCCAGTGAGGGCACTGAGCCTCGAAGGGGGGTGTGGATTGTGAGATCTCACATCGATTTGAGAGGGGAACGAGTGCCAGCGAGGATACTCGGTTCTGAAAGGGGTGGATTGTGAGATCCCACATCGATTGGAGAAGGGAACGAGTGCAAACGAGGCTGCTGGGCCTCGAAGGGGATGGATTCTGAGATCCCACATCGATTGAAGAGTGGAACGAGTACAAACGAGGATGCTGGGTTTGGAAGGGGGGTGGATTCTGAGAACCCACATGGTTTGGAAAGGGGAACGAAACATTTTTTATAAGGGTATGAAAACCTCTCCCTAGTTGACGTGTTTTAAAACCTTGAGGGGAAGCCGAAAGACAAAAGCTGAGAGGACAATATCTGCTAGGAGTGAGTTTGGGTGGTTCTCGATAAACTCACCAAAATTCCATAATAACTTCAGGATTAATTCCTATATCTTTGCTGCTAGTCTGAACTGATTTTTTTTCTTTAACTGCTCGTATGCACGTTTTCCTTACTGCAGACGAACACGAGCTATATTCGACGTTACTCTGAAAGCTCACCGGACCATTGAGCATCGTGACATAAAAGTTGGTAGGAATGTTAGCAGCTGGATTTCGCAATGGCTTAATCGAACGAAACCGTCTGCTGGGATTCATCAACATCCCAGTGGCACTAACACAGGTATGAAAATGATAAAACAGGTCTCCAACTCGTACATGAAACATCGAGCCAGCACTCGAGCAGCGATCGGTCAAAAAGTCGATAAATATCTATCATTTACCTCATCAGTACACGGATGGCCTAAGGCCTTCCCTACCATTGCAATGATCATGAGGCAACGAAAGCCTGCTGGGACTATGAATCAACACAGACAATTTAGCATTTGTAGCTCTGAAGGAATGAAAACAAATTATAGAAGAGGACGTTTCGAGCACGGTATTCGAGACGATATTAAGCAATGGATGATCCGAAACTAGAAGAG

mRNA sequence

ATGGTGTTATGGGAGATTGCACTGGCAACAGCCTATTTCTTGGGGCTCAAGCGAACATTTAAGCTCGTTTTGAAGACTCAGCGGCGCCTTGTTTCCCCCAACCACCCTCGGATTCGTCGATTTCTTCACCGACGAACACGAGCTATATTCGACGTTACTCTGAAAGCTCACCGGACCATTGAGCATCGTGACATAAAAGTTGGTAGGAATGTTAGCAGCTGGATTTCGCAATGGCTTAATCGAACGAAACCGTCTGCTGGGATTCATCAACATCCCAGTGGCACTAACACAGGTATGAAAATGATAAAACAGGTCTCCAACTCGTACATGAAACATCGAGCCAGCACTCGAGCAGCGATCGGTCAAAAAGTCGATAAATATCTATCATTTACCTCATCAGTACACGGATGGCCTAAGGCCTTCCCTACCATTGCAATGATCATGAGGCAACGAAAGCCTGCTGGGACTATGAATCAACACAGACAATTTAGCATTTGTAGCTCTGAAGGAATGAAAACAAATTATAGAAGAGGACGTTTCGAGCACGGTATTCGAGACGATATTAAGCAATGGATGATCCGAAACTAGAAGAG

Coding sequence (CDS)

ATGGTGTTATGGGAGATTGCACTGGCAACAGCCTATTTCTTGGGGCTCAAGCGAACATTTAAGCTCGTTTTGAAGACTCAGCGGCGCCTTGTTTCCCCCAACCACCCTCGGATTCGTCGATTTCTTCACCGACGAACACGAGCTATATTCGACGTTACTCTGAAAGCTCACCGGACCATTGAGCATCGTGACATAAAAGTTGGTAGGAATGTTAGCAGCTGGATTTCGCAATGGCTTAATCGAACGAAACCGTCTGCTGGGATTCATCAACATCCCAGTGGCACTAACACAGGTATGAAAATGATAAAACAGGTCTCCAACTCGTACATGAAACATCGAGCCAGCACTCGAGCAGCGATCGGTCAAAAAGTCGATAAATATCTATCATTTACCTCATCAGTACACGGATGGCCTAAGGCCTTCCCTACCATTGCAATGATCATGAGGCAACGAAAGCCTGCTGGGACTATGAATCAACACAGACAATTTAGCATTTGTAGCTCTGAAGGAATGAAAACAAATTATAGAAGAGGACGTTTCGAGCACGGTATTCGAGACGATATTAAGCAATGGATGATCCGAAACTAG
Homology
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BLAST of CmoCh19G002340 vs. TrEMBL
Match: A0A0A0LH53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901040 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 8.5e-77
Identity = 145/197 (73.60%), Postives = 168/197 (85.28%), Query Frame = 1 

Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEIALAT YFLGLKR FKL LKTQRR+VSP +PRIR+FL  RTRA+FDVT+K H+TI
Sbjct: 1   MVLWEIALATTYFLGLKRAFKLALKTQRRIVSPKYPRIRQFLRGRTRAVFDVTVKVHQTI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGT-NTGMKMIKQVSNSYMKHRASTRAA 120
           + +DIKV RN+ SWIS+WLNR KPSA   +HPSG+ NTGMKM+K+VSNSY+KHRASTRA 
Sbjct: 61  KRQDIKVNRNLRSWISRWLNRRKPSAETQEHPSGSINTGMKMMKKVSNSYLKHRASTRAV 120

Query: 121 IGQKVDKYLSFTSSVHGWPKA-FPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRG 180
           IGQK D+YL+ TSSVH WPK  FPTIAMIMRQRKP G + QHRQFSIC S G+KTN RR 
Sbjct: 121 IGQKFDQYLASTSSVHRWPKPFFPTIAMIMRQRKPTGIVIQHRQFSICGSHGLKTNDRRR 180

Query: 181 RFEHGIRDDIKQWMIRN 196
           RF+HGIR+DI QWM++N
Sbjct: 181 RFDHGIREDIMQWMVQN 197

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BLAST of CmoCh19G002340 vs. TrEMBL
Match: M5WAT0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011830mg PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 8.6e-45
Identity = 93/194 (47.94%), Postives = 133/194 (68.56%), Query Frame = 1 

Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEI L TAYFLGL+RT++L LK QRRL+SP HP+IR+F HRRTRA+FDV +K H++I
Sbjct: 1   MVLWEITLGTAYFLGLRRTYRLALKIQRRLISPKHPKIRQFAHRRTRAVFDVAIKVHKSI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMKMIKQVSNSYMKHRASTRAAI 120
           + RDI+VGRN+ + I +WL+R KP A I        T   M+ +V++S++K   ST+   
Sbjct: 61  QERDIEVGRNLGNRILRWLDRMKPEAQIRGPLEKPPTSASMMNKVNSSHLKTPGSTQITR 120

Query: 121 GQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRF 180
            Q+ D++L F++  + W K  P I M+MR RKP+G +NQ+R   +   + +++NY  G F
Sbjct: 121 NQESDRHL-FSTMTNMWSKPLPPITMMMRSRKPSGMINQYRHLCMNVPQPLRSNYSAGAF 180

Query: 181 EHGIRDDIKQWMIR 195
              IR DI QWM++
Sbjct: 181 GGVIRKDIMQWMLQ 193

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BLAST of CmoCh19G002340 vs. TrEMBL
Match: W9RDT2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017752 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.7e-43
Identity = 99/197 (50.25%), Postives = 134/197 (68.02%), Query Frame = 1 

Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEI L TAYFLGLKRT++L L+ QRRL+SP HPRIR+FLHRRTR +FDV LK H  +
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALRIQRRLISPKHPRIRQFLHRRTRVVFDVALKVHYKV 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHP---SGTNTGMKMIKQVSNS-YMKHRAST 120
           + RDI+VGRN+ +WI +WL++ KPSA I   P   +G ++ M M KQVS+S  +K   + 
Sbjct: 61  QQRDIEVGRNLGNWILRWLDQMKPSAQIRGPPPCSNGASSNMSMTKQVSSSTQLKSPGNP 120

Query: 121 RAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGT-MNQHRQFSICSSEGMKTNY 180
           + +  Q+ D++L FTS  + WPK F  I+ +MR  KP GT + Q+R   +     + ++Y
Sbjct: 121 QTSREQESDRHL-FTSYKNVWPKPFSGIS-VMRMPKPIGTSLTQYRHLCVNGVGALGSDY 180

Query: 181 RRGRFEHGIRDDIKQWM 193
            + RFE  IR DI QWM
Sbjct: 181 TKSRFEGVIRKDIMQWM 195

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BLAST of CmoCh19G002340 vs. TrEMBL
Match: A0A0D2N098_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G182900 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-42
Identity = 101/201 (50.25%), Postives = 133/201 (66.17%), Query Frame = 1 

Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEI L TAYFLGLKRT++L LK QRR++SP  PRIR+F+HRRTRA+FD+ LK H+ I
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALKIQRRIISPKRPRIRQFVHRRTRAVFDIALKVHQNI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGI----HQ--HPSGTNTGMKMIKQVSNSYMKHRA 120
           + RD++VGRN+ +WI +WL++ KPSA I    HQ  H    +  M + KQV+NS  K   
Sbjct: 61  QQRDLEVGRNLGNWILRWLDKMKPSAQIRPPSHQKLHHGTGSAKMNITKQVNNS-SKTPR 120

Query: 121 STRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTN 180
           S +     + DK L F+SS +   K+ PTIAM++R  + AG M Q+R  SI     ++ N
Sbjct: 121 SLQTPRNSEADKRL-FSSSTYMLSKSLPTIAMMIRPPRAAGNMTQYRHLSINGPHTLRLN 180

Query: 181 YRRGRFEHGIRDDIKQWMIRN 196
           Y RG  E  IR DI QWM+ N
Sbjct: 181 YTRG--EGVIRKDIMQWMLHN 197

[Close]
BLAST of CmoCh19G002340 vs. TrEMBL
Match: A0A059BZS3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00235 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.8e-42
Identity = 97/199 (48.74%), Postives = 133/199 (66.83%), Query Frame = 1 

Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEI LATAY LGLKRT+KL L+ QRRL+ P HP+IR+FLHRRTR +FDV LK HR I
Sbjct: 1   MVLWEITLATAYVLGLKRTYKLALRIQRRLIGPKHPKIRQFLHRRTRVVFDVALKVHRNI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIH-----QHPSGTNTGMKMIKQV-SNSYMKHRA 120
           + RDI+VGRN+ +WI + L+R KPSA I        PS ++TGM M KQ+   S  K+  
Sbjct: 61  QERDIEVGRNLGNWILRSLDRIKPSAQIRCSSSGGSPSNSSTGMNMTKQIKGTSQWKNPG 120

Query: 121 STRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTN 180
           +  ++  Q+ D+ + F+S  + WP+ FPTI MI++  KP   + Q+R  S    E  +++
Sbjct: 121 TFSSSKNQESDRRM-FSSLKNTWPRPFPTITMIIQSAKPTSRITQYRHVSY-GPEVPRSH 180

Query: 181 YRRGRFEHGIRDDIKQWMI 194
           + RG+F    R+DI QWM+
Sbjct: 181 FARGQFGGVFREDILQWML 197

[Close]
BLAST of CmoCh19G002340 vs. TAIR10
Match: AT1G32260.1 (AT1G32260.1 unknown protein)

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-39
Identity = 86/200 (43.00%), Postives = 127/200 (63.50%), Query Frame = 1 

Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MV WEI L TAYFLGL+RT++L LK QRRLV+P HP+IR+FLHRRTR IFDV +  H+ I
Sbjct: 1   MVFWEITLGTAYFLGLRRTYRLALKIQRRLVTPKHPKIRQFLHRRTRKIFDVAISVHKNI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPS---GTNTGMKMIKQVS--NSYMKHRAS 120
           + RDI+VGRN+ +WI +WL++ KP+A I   P     +N+ M   K+++  +    H  +
Sbjct: 61  QERDIEVGRNLGNWILRWLDKMKPAAQIRTRPELPHNSNSNMDKAKRLTELSRPKSHTNT 120

Query: 121 TRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQF---SICSSEGMK 180
           T+    ++ D++L FTS  H   K FP+++M+++  +P GT  Q+R +    + +S    
Sbjct: 121 TQTPQNRESDRHL-FTSLKHFRHKPFPSVSMMIQPPRPNGTTTQYRHYYSGGLAASLIQP 180

Query: 181 TNYRRGRFEHGIRDDIKQWM 193
           +    G F   +R DI QWM
Sbjct: 181 SYVTGGGFNGVVRKDILQWM 199

[Close]
BLAST of CmoCh19G002340 vs. TAIR10
Match: AT2G35480.1 (AT2G35480.1 unknown protein)

HSP 1 Score: 157.9 bits (398), Expect = 6.3e-39
Identity = 86/196 (43.88%), Postives = 126/196 (64.29%), Query Frame = 1 

Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWE+AL TAYFLG++RT++L LKTQRRLVSP HPRIR F+HRRT  IFD+ L+ H+ I
Sbjct: 1   MVLWELALGTAYFLGIRRTYRLALKTQRRLVSPKHPRIRDFMHRRTYQIFDMALRVHKNI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMKMIKQV-SNSYMKHRASTRAA 120
           + RD+ +GRN+ +WI + L+R KPSA +   P  T   +   K+V  ++ +K   +T+  
Sbjct: 61  QQRDMVIGRNLGNWILRGLDRMKPSAQV-LLPKNTEPSIDKAKRVLQSTRLKPHVNTQTP 120

Query: 121 IGQKVDKYLSFTSSVHGWPKAFPTIAMIM-RQRKPAGTMNQHRQFSICSSEGMKTNYRRG 180
             ++VD+ L    S+  +   +P  +M+M +  +  GT  Q+R +S+  S  +K  Y RG
Sbjct: 121 QNREVDRNLFM--SLRNFRSKYPIASMMMIKPPRSTGTTTQYRPYSVGESSLIKPIYARG 180

Query: 181 RFEHGIRDDIKQWMIR 195
            F   IR DI QWM++
Sbjct: 181 GFNSVIRKDILQWMVQ 193

[Close]
BLAST of CmoCh19G002340 vs. NCBI nr
Match: gi|659132079|ref|XP_008466006.1| (PREDICTED: uncharacterized protein LOC103503568 [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 1.4e-77
Identity = 149/197 (75.63%), Postives = 170/197 (86.29%), Query Frame = 1 

Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEIALAT YFLGLKRTFKLVLKTQRRLVSP +PRIR+FL  RTRA+FDVT+K H+TI
Sbjct: 1   MVLWEIALATTYFLGLKRTFKLVLKTQRRLVSPEYPRIRQFLRGRTRAVFDVTVKVHQTI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGT-NTGMKMIKQVSNSYMKHRASTRAA 120
           + +DIK  RN+ SWIS+WLNR+KPSA   +HP+GT NTGMKMIK+VSNSY+KHRASTRA 
Sbjct: 61  QRQDIKFDRNLGSWISRWLNRSKPSAETQEHPNGTMNTGMKMIKKVSNSYLKHRASTRAV 120

Query: 121 IGQKVDKYLSFTSSVHGWPKA-FPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRG 180
           IGQK D+YLS TSSVH WPK  FPTIAMIMRQRKPAG + QHRQFSI  S G+KTN RR 
Sbjct: 121 IGQKFDQYLSSTSSVHRWPKPFFPTIAMIMRQRKPAGIVIQHRQFSIRGSHGLKTNDRRR 180

Query: 181 RFEHGIRDDIKQWMIRN 196
           RF+HGIR+DI QWM++N
Sbjct: 181 RFDHGIREDIMQWMVQN 197

[Close]
BLAST of CmoCh19G002340 vs. NCBI nr
Match: gi|449436840|ref|XP_004136200.1| (PREDICTED: uncharacterized protein LOC101212537 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 1.2e-76
Identity = 145/197 (73.60%), Postives = 168/197 (85.28%), Query Frame = 1 

Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEIALAT YFLGLKR FKL LKTQRR+VSP +PRIR+FL  RTRA+FDVT+K H+TI
Sbjct: 1   MVLWEIALATTYFLGLKRAFKLALKTQRRIVSPKYPRIRQFLRGRTRAVFDVTVKVHQTI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGT-NTGMKMIKQVSNSYMKHRASTRAA 120
           + +DIKV RN+ SWIS+WLNR KPSA   +HPSG+ NTGMKM+K+VSNSY+KHRASTRA 
Sbjct: 61  KRQDIKVNRNLRSWISRWLNRRKPSAETQEHPSGSINTGMKMMKKVSNSYLKHRASTRAV 120

Query: 121 IGQKVDKYLSFTSSVHGWPKA-FPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRG 180
           IGQK D+YL+ TSSVH WPK  FPTIAMIMRQRKP G + QHRQFSIC S G+KTN RR 
Sbjct: 121 IGQKFDQYLASTSSVHRWPKPFFPTIAMIMRQRKPTGIVIQHRQFSICGSHGLKTNDRRR 180

Query: 181 RFEHGIRDDIKQWMIRN 196
           RF+HGIR+DI QWM++N
Sbjct: 181 RFDHGIREDIMQWMVQN 197

[Close]
BLAST of CmoCh19G002340 vs. NCBI nr
Match: gi|470128572|ref|XP_004300212.1| (PREDICTED: uncharacterized protein LOC101299301 [Fragaria vesca subsp. vesca])

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-45
Identity = 96/201 (47.76%), Postives = 137/201 (68.16%), Query Frame = 1 

Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEI L TAYFLGL+RT++L L+ QRR++SP HP+IR F HRRTRA+FDV +  H+ I
Sbjct: 1   MVLWEITLGTAYFLGLRRTYRLALRIQRRVISPKHPKIREFAHRRTRAVFDVAVSVHKNI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHP------SGTNTGMKMIKQVSNSYMKHRA 120
           + RDI +GRN+ +WI +WL+R KPSA I   P      +G+++GM M KQV++S+ K+  
Sbjct: 61  QQRDIDLGRNLGNWILRWLDRMKPSANIRAPPELKLPKNGSSSGMSMTKQVNSSHQKNPG 120

Query: 121 STRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTN 180
           +T     Q+ D+++ F+S  +G PK  P+I+M+MR R+ +GTM Q+R       +  + +
Sbjct: 121 NTHIR-NQESDRHM-FSSITNGLPKTLPSISMMMRARRTSGTMTQYRNLFTNRPDAFRPD 180

Query: 181 YRRGRFEHGIRDDIKQWMIRN 196
           Y RG F   IR DI QWM +N
Sbjct: 181 YNRGSFGGVIRKDIMQWMQQN 199

[Close]
BLAST of CmoCh19G002340 vs. NCBI nr
Match: gi|657975061|ref|XP_008379373.1| (PREDICTED: uncharacterized protein LOC103442368 [Malus domestica])

HSP 1 Score: 189.5 bits (480), Expect = 5.5e-45
Identity = 94/198 (47.47%), Postives = 134/198 (67.68%), Query Frame = 1 

Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEI LATAYFLGL+RT++L LK QRRL+ PNHP+IR F HRRTRA+FDV +K H+ I
Sbjct: 1   MVLWEITLATAYFLGLRRTYRLALKIQRRLIGPNHPKIREFAHRRTRAVFDVAVKVHKNI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIH----QHPSGTNTGMKMIKQVSNSYMKHRAST 120
           + RDI+VGRN+ + I +WL+R KP A I     + P+G+N+   + KQV +S +K   ST
Sbjct: 61  QERDIEVGRNLGNQILRWLDRMKPEAEIRGPLDKPPAGSNSSTSITKQVDSSQLKTPGST 120

Query: 121 RAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYR 180
           +    Q+ D+++ F++  + W K  P I M+MR RKP+G M  +R   + + + +++N  
Sbjct: 121 QITRNQESDRHM-FSTMTNMWSKPLPPITMMMRSRKPSGNMTHYRHLCMNAPQALRSNNS 180

Query: 181 RGRFEHGIRDDIKQWMIR 195
            G F   IR DI QWM++
Sbjct: 181 TGGFGGVIRKDIMQWMLQ 197

[Close]
BLAST of CmoCh19G002340 vs. NCBI nr
Match: gi|595848941|ref|XP_007209630.1| (hypothetical protein PRUPE_ppa011830mg [Prunus persica])

HSP 1 Score: 188.3 bits (477), Expect = 1.2e-44
Identity = 93/194 (47.94%), Postives = 133/194 (68.56%), Query Frame = 1 

Query: 1   MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI 60
           MVLWEI L TAYFLGL+RT++L LK QRRL+SP HP+IR+F HRRTRA+FDV +K H++I
Sbjct: 1   MVLWEITLGTAYFLGLRRTYRLALKIQRRLISPKHPKIRQFAHRRTRAVFDVAIKVHKSI 60

Query: 61  EHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMKMIKQVSNSYMKHRASTRAAI 120
           + RDI+VGRN+ + I +WL+R KP A I        T   M+ +V++S++K   ST+   
Sbjct: 61  QERDIEVGRNLGNRILRWLDRMKPEAQIRGPLEKPPTSASMMNKVNSSHLKTPGSTQITR 120

Query: 121 GQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRF 180
            Q+ D++L F++  + W K  P I M+MR RKP+G +NQ+R   +   + +++NY  G F
Sbjct: 121 NQESDRHL-FSTMTNMWSKPLPPITMMMRSRKPSGMINQYRHLCMNVPQPLRSNYSAGAF 180

Query: 181 EHGIRDDIKQWMIR 195
              IR DI QWM++
Sbjct: 181 GGVIRKDIMQWMLQ 193

The following BLAST results are available for this feature:
BLAST of CmoCh19G002340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh19G002340 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH53_CUCSA8.5e-7773.60Uncharacterized protein OS=Cucumis sativus GN=Csa_3G901040 PE=4 SV=1[more]
M5WAT0_PRUPE8.6e-4547.94Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011830mg PE=4 SV=1[more]
W9RDT2_9ROSA4.7e-4350.25Uncharacterized protein OS=Morus notabilis GN=L484_017752 PE=4 SV=1[more]
A0A0D2N098_GOSRA1.0e-4250.25Uncharacterized protein OS=Gossypium raimondii GN=B456_004G182900 PE=4 SV=1[more]
A0A059BZS3_EUCGR1.8e-4248.74Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00235 PE=4 SV=1[more]
BLAST of CmoCh19G002340 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G32260.11.3e-3943.00 unknown protein[more]
AT2G35480.16.3e-3943.88 unknown protein[more]
BLAST of CmoCh19G002340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659132079|ref|XP_008466006.1|1.4e-7775.63PREDICTED: uncharacterized protein LOC103503568 [Cucumis melo][more]
gi|449436840|ref|XP_004136200.1|1.2e-7673.60PREDICTED: uncharacterized protein LOC101212537 [Cucumis sativus][more]
gi|470128572|ref|XP_004300212.1|1.1e-4547.76PREDICTED: uncharacterized protein LOC101299301 [Fragaria vesca subsp. vesca][more]
gi|657975061|ref|XP_008379373.1|5.5e-4547.47PREDICTED: uncharacterized protein LOC103442368 [Malus domestica][more]
gi|595848941|ref|XP_007209630.1|1.2e-4447.94hypothetical protein PRUPE_ppa011830mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh19G002340.1CmoCh19G002340.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35998FAMILY NOT NAMEDcoord: 2..195
score: 2.1
NoneNo IPR availablePANTHERPTHR35998:SF1SUBFAMILY NOT NAMEDcoord: 2..195
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh19G002340Cucsa.312890Cucumber (Gy14) v1cgycmoB0866
CmoCh19G002340CmaCh16G011780Cucurbita maxima (Rimu)cmacmoB331
CmoCh19G002340CmaCh19G002190Cucurbita maxima (Rimu)cmacmoB508
CmoCh19G002340CmaCh02G016280Cucurbita maxima (Rimu)cmacmoB598
CmoCh19G002340Cla008828Watermelon (97103) v1cmowmB479
CmoCh19G002340Cla016236Watermelon (97103) v1cmowmB464
CmoCh19G002340Csa3G901040Cucumber (Chinese Long) v2cmocuB501
CmoCh19G002340Csa3G008880Cucumber (Chinese Long) v2cmocuB503
CmoCh19G002340MELO3C003432Melon (DHL92) v3.5.1cmomeB462
CmoCh19G002340MELO3C013831Melon (DHL92) v3.5.1cmomeB472
CmoCh19G002340ClCG09G011710Watermelon (Charleston Gray)cmowcgB440
CmoCh19G002340ClCG10G001380Watermelon (Charleston Gray)cmowcgB453
CmoCh19G002340CSPI03G46470Wild cucumber (PI 183967)cmocpiB507
CmoCh19G002340CSPI03G01410Wild cucumber (PI 183967)cmocpiB509
CmoCh19G002340Lsi07G011750Bottle gourd (USVL1VR-Ls)cmolsiB481
CmoCh19G002340LsiUNG000180Bottle gourd (USVL1VR-Ls)cmolsiB447
CmoCh19G002340Cp4.1LG14g09740Cucurbita pepo (Zucchini)cmocpeB480
CmoCh19G002340Cp4.1LG15g01950Cucurbita pepo (Zucchini)cmocpeB481
CmoCh19G002340Cp4.1LG05g00190Cucurbita pepo (Zucchini)cmocpeB498
CmoCh19G002340MELO3C003432.2Melon (DHL92) v3.6.1cmomedB533
CmoCh19G002340MELO3C013831.2Melon (DHL92) v3.6.1cmomedB544
CmoCh19G002340CsaV3_3G001460Cucumber (Chinese Long) v3cmocucB0601
CmoCh19G002340CsaV3_3G048910Cucumber (Chinese Long) v3cmocucB0599
CmoCh19G002340Cla97C10G185990Watermelon (97103) v2cmowmbB504
CmoCh19G002340Cla97C09G174410Watermelon (97103) v2cmowmbB529
CmoCh19G002340Bhi05G000302Wax gourdcmowgoB0644
CmoCh19G002340CsGy3G001320Cucumber (Gy14) v2cgybcmoB351
CmoCh19G002340CsGy3G043920Cucumber (Gy14) v2cgybcmoB349
CmoCh19G002340Carg24538Silver-seed gourdcarcmoB1301
CmoCh19G002340Carg08854Silver-seed gourdcarcmoB1055
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh19G002340CmoCh16G012280Cucurbita moschata (Rifu)cmocmoB277
CmoCh19G002340CmoCh02G016720Cucurbita moschata (Rifu)cmocmoB387
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh19G002340Cucurbita pepo (Zucchini)cmocpeB509
CmoCh19G002340Silver-seed gourdcarcmoB1292
CmoCh19G002340Cucurbita moschata (Rifu)cmocmoB396
CmoCh19G002340Cucumber (Gy14) v1cgycmoB0888
CmoCh19G002340Cucurbita maxima (Rimu)cmacmoB816